Ubiquitin-conjugating enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G78870 |
| fragaria_vesca | FvH4_3g18500 |
| malus_domestica | MD03G1241600.v1.1 MD11G1260900.v1.1 |
| prunus_persica | Prupe.4G167300_v2.0.a1 Prupe.4G167300_v2.0.a1 Prupe.4G167300_v2.0.a1 |
| pyrus_communis | pycom03g18840 pycom11g23030 |
| rosa_chinensis | RchiOBHm_Chr5g0031261 |
| rosa_laevigata | RLG00000033295 |
| rosa_roxburghii | Rroxscaffold_1G00049030 |
| rosa_rugosa | Rorug05G0123300 |
| rosa_samantha | Rh5CG240000 |
| rosa_wichuraiana | Rw5G019830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 70 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 429 |
| AccBSI | CCGCTC | 1 cut(s) | 364 |
| AciI | CCGC | 2 cut(s) | 362, 450 |
| AclWI | GGATC | 2 cut(s) | 115, 298 |
| AcsI | RAATTY | 1 cut(s) | 225 |
| AcuI | CTGAAG | 2 cut(s) | 201, 426 |
| AfaI | GTAC | 1 cut(s) | 315 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 68, 149, 429 |
| AgsI | TTSAA | 4 cut(s) | 112, 160, 277, 416 |
| AluBI | AGCT | 2 cut(s) | 250, 410 |
| AluI | AGCT | 2 cut(s) | 250, 410 |
| Alw26I | GTCTC | 1 cut(s) | 53 |
| AlwI | GGATC | 2 cut(s) | 115, 298 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 334 |
| AoxI | GGCC | 1 cut(s) | 127 |
| ApeKI | GCWGC | 1 cut(s) | 197 |
| ApoI | RAATTY | 1 cut(s) | 225 |
| AspS9I | GGNCC | 2 cut(s) | 128, 432 |
| AsuC2I | CCSGG | 1 cut(s) | 69 |
| AsuHPI | GGTGA | 2 cut(s) | 75, 211 |
| AvaII | GGWCC | 1 cut(s) | 432 |
| BaeGI | GKGCMC | 1 cut(s) | 346 |
| BbvI | GCAGC | 1 cut(s) | 184 |
| BcnI | CCSGG | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 53 |
| BfuAI | ACCTGC | 1 cut(s) | 70 |
| BisI | GCNGC | 1 cut(s) | 198 |
| BlsI | GCNGC | 1 cut(s) | 199 |
| Bme1390I | CCNGG | 1 cut(s) | 69 |
| Bme18I | GGWCC | 1 cut(s) | 432 |
| BmgT120I | GGNCC | 2 cut(s) | 128, 432 |
| BmiI | GGNNCC | 1 cut(s) | 434 |
| BmrFI | CCNGG | 1 cut(s) | 69 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 280, 312 |
| BpmI | CTGGAG | 1 cut(s) | 284 |
| BpuMI | CCSGG | 1 cut(s) | 69 |
| BsaJI | CCNNGG | 3 cut(s) | 68, 124, 423 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 124, 154 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 68, 149, 429 |
| Bse3DI | GCAATG | 1 cut(s) | 375 |
| BseDI | CCNNGG | 3 cut(s) | 68, 124, 423 |
| BseGI | GGATG | 1 cut(s) | 232 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 68, 149, 429 |
| BseMI | GCAATG | 1 cut(s) | 375 |
| BseMII | CTCAG | 2 cut(s) | 67, 381 |
| BseRI | GAGGAG | 1 cut(s) | 41 |
| BseSI | GKGCMC | 1 cut(s) | 346 |
| BseXI | GCAGC | 1 cut(s) | 184 |
| BseYI | CCCAGC | 1 cut(s) | 250 |
| BsgI | GTGCAG | 1 cut(s) | 48 |
| BshFI | GGCC | 1 cut(s) | 129 |
| BsiSI | CCGG | 1 cut(s) | 68 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 68, 149, 429 |
| BsmAI | GTCTC | 1 cut(s) | 53 |
| BsmBI | CGTCTC | 1 cut(s) | 53 |
| BsnI | GGCC | 1 cut(s) | 129 |
| Bsp1286I | GDGCHC | 1 cut(s) | 346 |
| Bsp143I | GATC | 2 cut(s) | 120, 303 |
| BspACI | CCGC | 2 cut(s) | 362, 450 |
| BspANI | GGCC | 1 cut(s) | 129 |
| BspCNI | CTCAG | 2 cut(s) | 66, 380 |
| BspLI | GGNNCC | 1 cut(s) | 434 |
| BspMI | ACCTGC | 1 cut(s) | 70 |
| BspPI | GGATC | 2 cut(s) | 115, 298 |
| BsrBI | CCGCTC | 1 cut(s) | 364 |
| BsrDI | GCAATG | 1 cut(s) | 375 |
| BssECI | CCNNGG | 3 cut(s) | 68, 124, 423 |
| BssMI | GATC | 2 cut(s) | 120, 303 |
| BssT1I | CCWWGG | 2 cut(s) | 124, 423 |
| Bst4CI | ACNGT | 4 cut(s) | 11, 87, 313, 336 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstC8I | GCNNGC | 1 cut(s) | 448 |
| BstDEI | CTNAG | 2 cut(s) | 53, 367 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 147 |
| BstF5I | GGATG | 1 cut(s) | 232 |
| BstKTI | GATC | 2 cut(s) | 123, 306 |
| BstMAI | GTCTC | 1 cut(s) | 53 |
| BstMBI | GATC | 2 cut(s) | 120, 303 |
| BstSCI | CCNGG | 1 cut(s) | 67 |
| BstSLI | GKGCMC | 1 cut(s) | 346 |
| BstV1I | GCAGC | 1 cut(s) | 184 |
| BstX2I | RGATCY | 1 cut(s) | 303 |
| BstYI | RGATCY | 1 cut(s) | 303 |
| BsuRI | GGCC | 1 cut(s) | 129 |
| BtsCI | GGATG | 1 cut(s) | 232 |
| BtsIMutI | CAGTG | 2 cut(s) | 61, 332 |
| BveI | ACCTGC | 1 cut(s) | 70 |
| Cac8I | GCNNGC | 1 cut(s) | 448 |
| CaiI | CAGNNNCTG | 1 cut(s) | 334 |
| Cfr13I | GGNCC | 2 cut(s) | 128, 432 |
| Csp6I | GTAC | 1 cut(s) | 314 |
| CviJI | RGCY | 6 cut(s) | 129, 197, 250, 404, 410, 422 |
| CviKI_1 | RGCY | 6 cut(s) | 129, 197, 250, 404, 410, 422 |
| CviQI | GTAC | 1 cut(s) | 314 |
| DdeI | CTNAG | 2 cut(s) | 53, 367 |
| DpnI | GATC | 2 cut(s) | 122, 305 |
| DpnII | GATC | 2 cut(s) | 120, 303 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| Eco130I | CCWWGG | 2 cut(s) | 124, 423 |
| Eco47I | GGWCC | 1 cut(s) | 432 |
| Eco57I | CTGAAG | 2 cut(s) | 201, 426 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 147 |
| EcoT14I | CCWWGG | 2 cut(s) | 124, 423 |
| ErhI | CCWWGG | 2 cut(s) | 124, 423 |
| Esp3I | CGTCTC | 1 cut(s) | 53 |
| FaiI | YATR | 6 cut(s) | 101, 147, 262, 272, 442, 444 |
| FauI | CCCGC | 1 cut(s) | 369 |
| Fnu4HI | GCNGC | 1 cut(s) | 198 |
| FokI | GGATG | 1 cut(s) | 219 |
| Fsp4HI | GCNGC | 1 cut(s) | 198 |
| GluI | GCNGC | 1 cut(s) | 198 |
| GsaI | CCCAGC | 1 cut(s) | 254 |
| GsuI | CTGGAG | 1 cut(s) | 284 |
| HaeIII | GGCC | 1 cut(s) | 129 |
| HapII | CCGG | 1 cut(s) | 68 |
| HinfI | GANTC | 2 cut(s) | 27, 289 |
| HpaII | CCGG | 1 cut(s) | 68 |
| HphI | GGTGA | 2 cut(s) | 75, 211 |
| Hpy166II | GTNNAC | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 3 cut(s) | 91, 308, 370 |
| Hpy188III | TCNNGA | 2 cut(s) | 266, 301 |
| Hpy8I | GTNNAC | 1 cut(s) | 59 |
| Hpy99I | CGWCG | 2 cut(s) | 27, 359 |
| HpyAV | CCTTC | 2 cut(s) | 143, 249 |
| HpyCH4III | ACNGT | 4 cut(s) | 11, 87, 313, 336 |
| HpyCH4IV | ACGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 3 cut(s) | 65, 380, 446 |
| HpyF3I | CTNAG | 2 cut(s) | 53, 367 |
| HpySE526I | ACGT | 1 cut(s) | 46 |
| Kzo9I | GATC | 2 cut(s) | 120, 303 |
| LmnI | GCTCC | 1 cut(s) | 205 |
| LpnPI | CCDG | 7 cut(s) | 75, 81, 192, 236, 306, 314, 314 |
| Lsp1109I | GCAGC | 1 cut(s) | 184 |
| MaeII | ACGT | 1 cut(s) | 46 |
| MalI | GATC | 2 cut(s) | 122, 305 |
| MbiI | CCGCTC | 1 cut(s) | 364 |
| MboI | GATC | 2 cut(s) | 120, 303 |
| MboII | GAAGA | 3 cut(s) | 8, 104, 194 |
| MflI | RGATCY | 1 cut(s) | 303 |
| MhlI | GDGCHC | 1 cut(s) | 346 |
| MluCI | AATT | 1 cut(s) | 225 |
| MlyI | GAGTC | 1 cut(s) | 298 |
| MmeI | TCCRAC | 1 cut(s) | 144 |
| MnlI | CCTC | 2 cut(s) | 62, 394 |
| MspI | CCGG | 1 cut(s) | 68 |
| MspR9I | CCNGG | 1 cut(s) | 69 |
| NciI | CCSGG | 1 cut(s) | 69 |
| NdeII | GATC | 2 cut(s) | 120, 303 |
| NlaIV | GGNNCC | 1 cut(s) | 434 |
| PfeI | GAWTC | 1 cut(s) | 27 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 429 |
| PkrI | GCNGC | 1 cut(s) | 199 |
| PleI | GAGTC | 1 cut(s) | 297 |
| PpsI | GAGTC | 1 cut(s) | 297 |
| PspFI | CCCAGC | 1 cut(s) | 250 |
| PspN4I | GGNNCC | 1 cut(s) | 434 |
| PspPI | GGNCC | 2 cut(s) | 128, 432 |
| PstNI | CAGNNNCTG | 1 cut(s) | 334 |
| PsuI | RGATCY | 1 cut(s) | 303 |
| RsaI | GTAC | 1 cut(s) | 315 |
| RsaNI | GTAC | 1 cut(s) | 314 |
| SatI | GCNGC | 1 cut(s) | 198 |
| Sau3AI | GATC | 2 cut(s) | 120, 303 |
| Sau96I | GGNCC | 2 cut(s) | 128, 432 |
| SchI | GAGTC | 1 cut(s) | 298 |
| ScrFI | CCNGG | 1 cut(s) | 69 |
| SduI | GDGCHC | 1 cut(s) | 346 |
| SetI | ASST | 5 cut(s) | 49, 64, 210, 252, 412 |
| SinI | GGWCC | 1 cut(s) | 432 |
| Sse9I | AATT | 1 cut(s) | 225 |
| SsiI | CCGC | 2 cut(s) | 362, 450 |
| StyD4I | CCNGG | 1 cut(s) | 67 |
| StyI | CCWWGG | 2 cut(s) | 124, 423 |
| TaaI | ACNGT | 4 cut(s) | 11, 87, 313, 336 |
| TaiI | ACGT | 1 cut(s) | 49 |
| TaqI | TCGA | 1 cut(s) | 211 |
| TasI | AATT | 1 cut(s) | 225 |
| TatI | WGTACW | 1 cut(s) | 313 |
| TfiI | GAWTC | 1 cut(s) | 27 |
| TscAI | CASTG | 2 cut(s) | 61, 339 |
| TseI | GCWGC | 1 cut(s) | 197 |
| TspDTI | ATGAA | 1 cut(s) | 162 |
| TspRI | CASTG | 2 cut(s) | 61, 339 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 429 |
| VpaK11BI | GGWCC | 1 cut(s) | 432 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 147 |
| XapI | RAATTY | 1 cut(s) | 225 |