Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0010649

Physical Location & Seq

Genomic Coordinates Forward (+)

19770784 .. 19776486

Gene Structure 5703 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3993 bp

ATGAGTTCAAAGATCATAGAACTAACTAATTACGCCAAATCCTTAAAATATATGGAATCCTGGAGAACACCTGCTGAGCCTACGAAATTTGACAGGTTACTAGAATTTTGGAAACAAATGTTCAAGGTTTTGGATGTGGTACATTTGGCCCCATATCCAGTTTCTGATAGAAGGCAAAAGATCAGGAAGGATATGATGATGGTGTTATTCACATATTTTTTAGGAGAAGTTAGGTTCTCATCCTTCCTTTTATTAATAACATCATTAATTATTTCAATAATAAAATATTTTTTTATTTCTAAATATATCCATTTAATGTTAAAAATATTTTTAGTTTTAGTTTTTAAATGTAATTCTTTTTTAATTTGTACCAATTTTCTGTTCAGTTTTAATTTGTACCTATATATTAATTTCTTTTTGTGCCCATATTTTTTAAAGTTTATTTGTATTTGTACCCATATATGTTTTTTTATTTGTACTTTTTATTTTGCTAAATGTACCCATGCTAATTATATGTACGCATTCATACCAATTTGTTATATTTTTTCTAATCCATTTTTAAACTTATATGAGTACATTCTTTTTTCTTTGATTTTAAAATGTATCCATGTCAATAATCGAAGAAATTTACTAATGTTATTAAGCCTAATATCTTTTTTTTTTTTTGGTGATTTTGAAGAATGCACCCATTATATTTATATTTTAATATTTTTAATCCCACAAATTATGGTTTTTTATTTAAAATCTCATTTATATAAACAACTAAAATTTCTAATTTTTAATTTAAATAGTTTCAATCAAAGAAAATTCATAGCTAAGGACTGCATCCAAATTTTGTTATTTAATATTTTTCAATTCATTCGATATAACATCCAAAAATTAAAAATGTGTGTAGAAGAACAAAAGAGGTGTGTGGATATAGGCTTAAAAATTTTGAGTTTTAACGATAAAGACAAAATAAAAGGTAAAGTGAATAGTACCAGGATTGACTTTTTATATTCATCACTAAGCATCATTATTGGCAGCGGTGTGGTATTCATATTATACGAAAAATTATCTTATGGTGACGGGGCCTCCTCGACAAAGCACCAAGGCCTCTGCTTGATGACACGCATGTATGCGTGTGTAGATAATCGTGTTCAAGTGTTAATAACATTTAGCCATTTGATTATTATCATCAGGAACATTTCATTAGTTATCGACATCACAAGGTTGGTTTTTATTTTATTAGGTCTTCAATATTACCTAAAAAGGATAAGTTCAAAATATGAGATAATAGGGTATATATCTACATTGGTATATGCAATTAAATCAGAATTGCAACAAAGTTTGTCACTCAATGAGTTAGGCAAACCAAGTAGGCAAAATATATATATATATATATATATATATATATATATGGGATCGATCGATCATATTTTTATAAATATTTTTATACTTCTTTGTATAAAGATAAAATTAAAATTAAAAAAACATAAAATCTGGAAGAAAATTAAAATTAAAATTAAAAAAAAGGAAGAAACCCTAATCGTGAAAATAAGAAAGGAGGCTGCAACCTCTATCTCCGATCCCCAGGTCTACAACTTCCATATATGTAGGATGGTTAAATTAGGTTTTGGAATTTTTTTTAGTTCAATTCATGTATTTGATGGTTTTTCTACCCTTTTAGTTTTTCAAATAAAAAAAACCAACTATCTCAATATGCTTTCCATATGTTTTGATTGTAAGTCGAAAGTATGTGTTGTGTTCCTTTTGGTTCTAGATTATAATTTAGATATTGATTTTCTTACCTTGCTTCATTTTCATTTTTCAACAATCTTTTTTCTGTTACGCAAGCAAATCTTTGATGTTTCTAACGATCTTATTGTGTATGATTATTTGAACATTGCAGACCTCATCGACAAAGAAGAGATTTTTTTTTTTTTTGTTATTAAGGTTCAATTTCTAATTATTTATGTCACATCCCGACCCAGTGTTTGCTTTGGGCCCCAACCGAGCCTTCACGGTTTTGTTTCTGGGAGCTCATATGAGAATTTCCAAGTGGATCACCCATCCTGGGATTACTCTAGCCCAAACTCACTTAACTTCGGAGTTCCGATGGAACCCAAAACCAGTGAATTCCCAAAAGGCCTTGTGCTATATGGAGGTGGGCATGTACATATAAGGCATAAAGGATCCTTTCCCCTGGGCGATGTGGGATCTAACAATCCACCCCCCTTAGGGGCCCGACGTCCTCTGTCACATCCCGATCCGGGCTCCACCACATCCTGGGCTCGACTCTGCTGTAGCACGATATTGTCCACTTTAGGCCCCAACCACGCCTTCATGTACGATATTGTCCGCTTTGGGCCCCAACCACGCCATCATCGTTTTGTTTCTGGGAACTCACACGAGAACTTCCCAATGGGTCACCCATCCTGGGATTGCTCCAGCCCAAACTTGCTTAACTTCGGAGTTCCGATGGAACCCGAAGCCAGTGAGTTCCCAAAACGCCTCGTGCTATATGGAGGTGGGCATGTACATATAAGGCATAGAGGATCCTCTCCCCTGGGTGATATGGGATCTAACAATTTATTTATTTATTTTATTCTATTAGATATTTGTTTTGATTTAGATTATCATTTAATGTTTAAAACTTTTCACATCACTCTTAATCTAGACCCCTACCCTATATATATATATATATATATATATATATATATATATATATATATTACTTATTTCATCTATAACATCTACTTTGAGCTTTTAACAAAATTTGCAAACTCAATTTTCATACCGTTGGAGCTAGCTTTTGTCTACGTGGCTCGTCAAAATGAGTTTGCCTACTCAAATTACCTGTTATTATTTTTAGAAACTATATTACTATATAATTGTTTGAGGGTCAACCTGCTAATCTTAAATACTGATTGCTATATATGCCTACCCCGCCACCAAAAAAAGTTCAGAAAATGGAACTTCATCGAGTTTTTGTTTCTGTATAAATTTGGAGTCTTTACAAAAATAAATAAACACAAAACGTATTGGCAAAGAATTGAATTGATGAATAAACTAATATTATTGCAAACTTCCAAGGATTATGCTTTATTAATGGTAAATTTTAATTCAGTATGTGGCTTCCTGAATTGGTTACTCCTTAATCACCAGGGTTTAAACCATAGTACAAATTACGCTAATATAGTCGATAATGATTGCTTTGGTGATGGAAGTGAGAGGGGAAGAAAAAAAGGAGCTAAAGCACTTTCATTGGTCCCATATCATGTCTCCTCACTAGCTAGCGCCCTTGATGTGATCTCTTGTTCAAAATTATTATTATTTTCTTTTTCTTCTCTCCCACTGCAAATTTGTTTTCTTCTCCAGCGAAATTCCTTTCCACCTTCTCTCATACTCAAAGAAATAGTAAAAAACAAAACAAAATTATCACTCGCCGGGATGTCTACCAACAAAGGAAAAGATATAGCGGAAGGATCGTCGTCTGCTTCTGCTACTACTACTGATCATCAACAACAGAAGCAGACTTCGCAGCCGCCGACTCAGCTGAGCCGGTACGAGTCACAGAAGAGGAGAGATTGGAATACTTTTGGGCAGTACTTGAGGAACCAGAGGCCGCCAGTAGCTCTTTCACAGAGTAACTCCAACCATGTGCTTGATTTCCTAAGGTACCTGGACCAATTTGGAAAGACCAAGGTGCACGCTCAAGGATGTGTGTTTTTTGGGCAACCTGAGCCTCCTGGCCCTTGCACCTGTCCGCTAAGACAAGCTTGGGGTAGCCTTGATGCACTGATCGAACGGCTGAGAGCTGCTTATGAAGAAAATGGTGGGTTGCCAGAAACAAACCCATTTGCAAGTGGGGCTATAAGAGTCTATCTGCGTGAGGTGAGGGACTCTCAAGCCAAGGCTCGGGGAATTCCGTACAAGAAGAAGAAAAAGAAGAGAAATCTAATGAAGGCAAATCTTGACCATAATCCCAACATCTCCATGCAGCAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009299 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048856 GO:0050896 GO:0071704 GO:0090304 GO:0090698 GO:0097659 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF640

Protein Analysis

1331

Amino Acids

154.83

Weight (kDa)

9.34

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ALOG_dom	PF04852	1172 - 1295	2.3e-63	ALOG domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16910 AT1G78815
fragaria_vesca	FvH4_3g18340 FvH4_3g18340
malus_domestica	MD03G1242600.v1.1 MD11G1263200.v1.1
prunus_persica	Prupe.4G165300_v2.0.a1 Prupe.4G165300_v2.0.a1
pyrus_communis	pycom03g18980 pycom11g23180
rosa_chinensis	RchiOBHm_Chr5g0030991
rosa_laevigata	RLG00000033279
rosa_multiflora	Rmu_sc0001974.1_g000001
rosa_roxburghii	Rroxscaffold_1G00049260
rosa_rugosa	Rorug05G0122100
rosa_samantha	Rh5AG215400 Rh5BG214400 Rh5CG238300 Rh5DG219000
rosa_wichuraiana	Rw5G019700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1424, 1767
AarI	CACCTGC	1 cut(s)	79
AatII	GACGTC	1 cut(s)	2233
Acc36I	ACCTGC	2 cut(s)	79, 2898
Acc65I	GGTACC	1 cut(s)	3660
AccB1I	GGYRCC	1 cut(s)	3660
AccB7I	CCANNNNNTGG	1 cut(s)	2268
AccI	GTMKAC	3 cut(s)	1578, 2799, 3437
AciI	CCGC	7 cut(s)	1026, 2341, 2929, 3461, 3527, 3608, 3749
AcyI	GRCGYC	1 cut(s)	2230
AfiI	CCNNNNNNNGG	8 cut(s)	2056, 2219, 2220, 2221, 2252, 2268, 2419, 3900
AjuI	GAANNNNNNNTTGG	6 cut(s)	365, 397, 1983, 2015, 2306, 2338
Alw21I	GWGCWC	2 cut(s)	2024, 3693
Alw26I	GTCTC	1 cut(s)	3268
Alw44I	GTGCAC	1 cut(s)	3689
AlwNI	CAGNNNCTG	1 cut(s)	164
Ama87I	CYCGRG	1 cut(s)	3900
ApaI	GGGCCC	3 cut(s)	1989, 2227, 2352
ApaLI	GTGCAC	1 cut(s)	3689
ApeKI	GCWGC	5 cut(s)	1023, 1550, 3523, 3800, 3982
ArsI	GACNNNNNNTTYG	2 cut(s)	1959, 1991
AseI	ATTAAT	4 cut(s)	254, 266, 408, 3089
Asp718I	GGTACC	1 cut(s)	3660
AspLEI	GCGC	1 cut(s)	3281
AsuC2I	CCSGG	2 cut(s)	2253, 3430
AsuHPI	GGTGA	8 cut(s)	680, 1076, 2039, 2402, 2564, 3134, 3212, 3889
AsuNHI	GCTAGC	2 cut(s)	2788, 3275
AvaI	CYCGRG	1 cut(s)	3900
AvaII	GGWCC	2 cut(s)	3250, 3667
AxyI	CCTNAGG	2 cut(s)	2218, 3656
BaeGI	GKGCMC	5 cut(s)	425, 1989, 2227, 2352, 3693
BamHI	GGATCC	2 cut(s)	2174, 2537
BanI	GGYRCC	1 cut(s)	3660
BanII	GRGCYC	6 cut(s)	1989, 2024, 2227, 2258, 2275, 2352
BauI	CACGAG	2 cut(s)	2390, 2495
BbsI	GAAGAC	1 cut(s)	1226
Bbv12I	GWGCWC	2 cut(s)	2024, 3693
BbvI	GCAGC	4 cut(s)	1035, 1537, 3535, 3787
BccI	CCATC	9 cut(s)	193, 1594, 1643, 2059, 2092, 2370, 2422, 2455, 3197
BceAI	ACGGC	1 cut(s)	3806
BciVI	GTATCC	1 cut(s)	614
BclI	TGATCA	1 cut(s)	3496
BcnI	CCSGG	2 cut(s)	2253, 3430
BcoDI	GTCTC	1 cut(s)	3268
BfaI	CTAG	7 cut(s)	101, 1760, 2067, 2657, 2789, 3272, 3276
BfmI	CTRYAG	1 cut(s)	2284
BfoI	RGCGCY	1 cut(s)	3282
BfuAI	ACCTGC	2 cut(s)	79, 2898
BfuI	GTATCC	1 cut(s)	614
BisI	GCNGC	7 cut(s)	1024, 1551, 3524, 3527, 3608, 3801, 3983
BlpI	GCTNAGC	2 cut(s)	75, 3539
BlsI	GCNGC	7 cut(s)	1025, 1552, 3525, 3528, 3609, 3802, 3984
BmcAI	AGTACT	1 cut(s)	3590
Bme18I	GGWCC	2 cut(s)	3250, 3667
BmeT110I	CYCGRG	1 cut(s)	3900
BmrI	ACTGGG	1 cut(s)	1965
BmsI	GCATC	3 cut(s)	834, 1020, 3766
BmtI	GCTAGC	2 cut(s)	2792, 3279
BmuI	ACTGGG	1 cut(s)	1965
BpiI	GAAGAC	1 cut(s)	1226
BplI	GAGNNNNNCTC	2 cut(s)	3871, 3903
BpmI	CTGGAG	3 cut(s)	82, 2413, 3341
Bpu10I	CCTNAGC	2 cut(s)	816, 3723
Bpu1102I	GCTNAGC	2 cut(s)	75, 3539
BpuEI	CTTGAG	3 cut(s)	3613, 3681, 3873
BpuMI	CCSGG	2 cut(s)	2253, 3430
Bsa29I	ATCGAT	2 cut(s)	1406, 1410
BsaAI	YACGTR	1 cut(s)	2803
BsaBI	GATNNNNATC	1 cut(s)	1172
BsaHI	GRCGYC	1 cut(s)	2230
BsaXI	ACNNNNNCTCC	2 cut(s)	1058, 1088
Bsc4I	CCNNNNNNNGG	8 cut(s)	2056, 2219, 2220, 2221, 2252, 2268, 2419, 3900
Bse118I	RCCGGY	1 cut(s)	3543
Bse1I	ACTGG	5 cut(s)	158, 1971, 2112, 2475, 3611
Bse21I	CCTNAGG	2 cut(s)	2218, 3656
Bse3DI	GCAATG	1 cut(s)	1884
Bse8I	GATNNNNATC	1 cut(s)	1172
BseCI	ATCGAT	2 cut(s)	1406, 1410
BseJI	GATNNNNATC	1 cut(s)	1172
BseLI	CCNNNNNNNGG	8 cut(s)	2056, 2219, 2220, 2221, 2252, 2268, 2419, 3900
BseMI	GCAATG	1 cut(s)	1884
BseMII	CTCAG	5 cut(s)	66, 3530, 3548, 3714, 3785
BseNI	ACTGG	5 cut(s)	158, 1971, 2112, 2475, 3611
BseRI	GAGGAG	3 cut(s)	1066, 3256, 3577
BseSI	GKGCMC	5 cut(s)	425, 1989, 2227, 2352, 3693
BseXI	GCAGC	4 cut(s)	1035, 1537, 3535, 3787
Bsh1285I	CGRYCG	1 cut(s)	1410
BshNI	GGYRCC	1 cut(s)	3660
BshVI	ATCGAT	2 cut(s)	1406, 1410
BsiEI	CGRYCG	1 cut(s)	1410
BsiHKAI	GWGCWC	2 cut(s)	2024, 3693
BsiHKCI	CYCGRG	1 cut(s)	3900
BsiSI	CCGG	3 cut(s)	2252, 3429, 3544
BslFI	GGGAC	2 cut(s)	3236, 3896
BslI	CCNNNNNNNGG	8 cut(s)	2056, 2219, 2220, 2221, 2252, 2268, 2419, 3900
BsmAI	GTCTC	1 cut(s)	3268
BsmFI	GGGAC	2 cut(s)	3236, 3896
BsmI	GAATGC	2 cut(s)	521, 686
BsoBI	CYCGRG	1 cut(s)	3900
Bsp120I	GGGCCC	3 cut(s)	1985, 2223, 2348
Bsp1286I	GDGCHC	8 cut(s)	425, 1989, 2024, 2227, 2258, 2275, 2352, 3693
Bsp1407I	TGTACA	2 cut(s)	2155, 2518
Bsp1720I	GCTNAGC	2 cut(s)	75, 3539
BspACI	CCGC	7 cut(s)	1026, 2341, 2929, 3461, 3527, 3608, 3749
BspCNI	CTCAG	5 cut(s)	67, 3531, 3547, 3715, 3786
BspDI	ATCGAT	2 cut(s)	1406, 1410
BspMI	ACCTGC	2 cut(s)	79, 2898
BspOI	GCTAGC	2 cut(s)	2792, 3279
BspT107I	GGYRCC	1 cut(s)	3660
BsrDI	GCAATG	1 cut(s)	1884
BsrFI	RCCGGY	1 cut(s)	3543
BsrGI	TGTACA	2 cut(s)	2155, 2518
BsrI	ACTGG	5 cut(s)	158, 1971, 2112, 2475, 3611
BssAI	RCCGGY	1 cut(s)	3543
BssNI	GRCGYC	1 cut(s)	2230
BssSI	CACGAG	2 cut(s)	2390, 2495
BssT1I	CCWWGG	4 cut(s)	1090, 3072, 3684, 3894
Bst2BI	CACGAG	2 cut(s)	2390, 2495
Bst4CI	ACNGT	2 cut(s)	2006, 2781
Bst6I	CTCTTC	3 cut(s)	1902, 3554, 3926
BstACI	GRCGYC	1 cut(s)	2230
BstAUI	TGTACA	2 cut(s)	2155, 2518
BstBAI	YACGTR	1 cut(s)	2803
BstC8I	GCNNGC	4 cut(s)	1835, 2790, 3277, 3693
BstEII	GGTNACC	1 cut(s)	2408
BstH2I	RGCGCY	1 cut(s)	3282
BstHHI	GCGC	1 cut(s)	3281
BstMAI	GTCTC	1 cut(s)	3268
BstMCI	CGRYCG	1 cut(s)	1410
BstMWI	GCNNNNNNNGC	6 cut(s)	2919, 2928, 3520, 3535, 3724, 3851
BstNSI	RCATGY	3 cut(s)	1117, 2156, 2519
BstPI	GGTNACC	1 cut(s)	2408
BstSFI	CTRYAG	1 cut(s)	2284
BstSLI	GKGCMC	5 cut(s)	425, 1989, 2227, 2352, 3693
BstV1I	GCAGC	4 cut(s)	1035, 1537, 3535, 3787
BstV2I	GAAGAC	1 cut(s)	1226
BstX2I	RGATCY	4 cut(s)	2174, 2198, 2537, 2561
BstYI	RGATCY	4 cut(s)	2174, 2198, 2537, 2561
Bsu15I	ATCGAT	2 cut(s)	1406, 1410
Bsu36I	CCTNAGG	2 cut(s)	2218, 3656
BsuI	GTATCC	1 cut(s)	614
BsuTUI	ATCGAT	2 cut(s)	1406, 1410
BtgZI	GCGATG	1 cut(s)	2205
BtsI	GCAGTG	1 cut(s)	3335
BtsIMutI	CAGTG	5 cut(s)	1978, 2119, 2482, 3335, 3779
BveI	ACCTGC	2 cut(s)	79, 2898
Cac8I	GCNNGC	4 cut(s)	1835, 2790, 3277, 3693
CaiI	CAGNNNCTG	1 cut(s)	164
CfoI	GCGC	1 cut(s)	3281
Cfr10I	RCCGGY	1 cut(s)	3543
ClaI	ATCGAT	2 cut(s)	1406, 1410
DraI	TTTAAA	8 cut(s)	346, 435, 561, 597, 741, 786, 2632, 3153
Eam1104I	CTCTTC	3 cut(s)	1902, 3554, 3926
EarI	CTCTTC	3 cut(s)	1902, 3554, 3926
Ecl136II	GAGCTC	1 cut(s)	2022
Eco130I	CCWWGG	4 cut(s)	1090, 3072, 3684, 3894
Eco147I	AGGCCT	2 cut(s)	1095, 2130
Eco24I	GRGCYC	6 cut(s)	1989, 2024, 2227, 2258, 2275, 2352
Eco47I	GGWCC	2 cut(s)	3250, 3667
Eco53kI	GAGCTC	1 cut(s)	2022
Eco81I	CCTNAGG	2 cut(s)	2218, 3656
Eco88I	CYCGRG	1 cut(s)	3900
Eco91I	GGTNACC	1 cut(s)	2408
EcoICRI	GAGCTC	1 cut(s)	2022
EcoO109I	RGGNCCY	5 cut(s)	1071, 1986, 2223, 2309, 2349
EcoO65I	GGTNACC	1 cut(s)	2408
EcoRI	GAATTC	2 cut(s)	2117, 3906
EcoT14I	CCWWGG	4 cut(s)	1090, 3072, 3684, 3894
EcoT38I	GRGCYC	6 cut(s)	1989, 2024, 2227, 2258, 2275, 2352
ErhI	CCWWGG	4 cut(s)	1090, 3072, 3684, 3894
FalI	AAGNNNNNCTT	4 cut(s)	1826, 1858, 3745, 3777
FaqI	GGGAC	2 cut(s)	3236, 3896
FauI	CCCGC	1 cut(s)	2936
FauNDI	CATATG	2 cut(s)	1712, 2026
FbaI	TGATCA	1 cut(s)	3496
FblI	GTMKAC	3 cut(s)	1578, 2799, 3437
Fnu4HI	GCNGC	7 cut(s)	1024, 1551, 3524, 3527, 3608, 3801, 3983
FriOI	GRGCYC	6 cut(s)	1989, 2024, 2227, 2258, 2275, 2352
Fsp4HI	GCNGC	7 cut(s)	1024, 1551, 3524, 3527, 3608, 3801, 3983
FspBI	CTAG	7 cut(s)	101, 1760, 2067, 2657, 2789, 3272, 3276
GlaI	GCGC	1 cut(s)	3280
GluI	GCNGC	7 cut(s)	1024, 1551, 3524, 3527, 3608, 3801, 3983
GsuI	CTGGAG	3 cut(s)	82, 2413, 3341
HaeII	RGCGCY	1 cut(s)	3282
HapII	CCGG	3 cut(s)	2252, 3429, 3544
HhaI	GCGC	1 cut(s)	3281
Hin1I	GRCGYC	1 cut(s)	2230
Hin6I	GCGC	1 cut(s)	3279
HinP1I	GCGC	1 cut(s)	3279
HincII	GTYRAC	1 cut(s)	2887
HindII	GTYRAC	1 cut(s)	2887
HindIII	AAGCTT	1 cut(s)	3759
HinfI	GANTC	7 cut(s)	56, 2277, 2991, 3532, 3551, 3861, 3884
HpaII	CCGG	3 cut(s)	2252, 3429, 3544
HphI	GGTGA	8 cut(s)	680, 1076, 2039, 2402, 2564, 3134, 3212, 3889
Hpy166II	GTNNAC	6 cut(s)	1579, 2301, 2800, 2887, 3438, 3691
Hpy188I	TCNGA	8 cut(s)	166, 1315, 1567, 2090, 2097, 2453, 2460, 2948
Hpy8I	GTNNAC	6 cut(s)	1579, 2301, 2800, 2887, 3438, 3691
Hpy99I	CGWCG	2 cut(s)	2232, 3475
HpyAV	CCTTC	8 cut(s)	165, 181, 253, 2009, 2332, 3387, 3458, 3940
HpyCH4III	ACNGT	2 cut(s)	2006, 2781
HpyCH4IV	ACGT	3 cut(s)	2230, 2802, 3020
HpyF10VI	GCNNNNNNNGC	6 cut(s)	2919, 2928, 3520, 3535, 3724, 3851
HpySE526I	ACGT	3 cut(s)	2230, 2802, 3020
Hsp92I	GRCGYC	1 cut(s)	2230
HspAI	GCGC	1 cut(s)	3279
KpnI	GGTACC	1 cut(s)	3664
Ksp22I	TGATCA	1 cut(s)	3496
LmnI	GCTCC	5 cut(s)	2019, 2261, 2432, 2785, 3230
Lsp1109I	GCAGC	4 cut(s)	1035, 1537, 3535, 3787
LweI	GCATC	3 cut(s)	834, 1020, 3766
MaeI	CTAG	7 cut(s)	101, 1760, 2067, 2657, 2789, 3272, 3276
MaeII	ACGT	3 cut(s)	2230, 2802, 3020
MflI	RGATCY	4 cut(s)	2174, 2198, 2537, 2561
MhlI	GDGCHC	8 cut(s)	425, 1989, 2024, 2227, 2258, 2275, 2352, 3693
MlyI	GAGTC	6 cut(s)	2271, 3000, 3526, 3560, 3870, 3878
MmeI	TCCRAC	2 cut(s)	2763, 3660
MslI	CAYNNNNRTG	1 cut(s)	3977
MspA1I	CMGCKG	2 cut(s)	1026, 3538
MspI	CCGG	3 cut(s)	2252, 3429, 3544
MssI	GTTTAAAC	1 cut(s)	3153
Mva1269I	GAATGC	2 cut(s)	521, 686
MwoI	GCNNNNNNNGC	6 cut(s)	2919, 2928, 3520, 3535, 3724, 3851
NciI	CCSGG	2 cut(s)	2253, 3430
NdeI	CATATG	2 cut(s)	1712, 2026
NheI	GCTAGC	2 cut(s)	2788, 3275
NmuCI	GTSAC	6 cut(s)	1064, 1332, 1957, 2238, 2408, 3552
NspI	RCATGY	3 cut(s)	1117, 2156, 2519
PaqCI	CACCTGC	1 cut(s)	79
PasI	CCCWGGG	2 cut(s)	2185, 2548
PceI	AGGCCT	2 cut(s)	1095, 2130
PcsI	WCGNNNNNNNCGW	2 cut(s)	2365, 3527
PctI	GAATGC	2 cut(s)	521, 686
PfeI	GAWTC	1 cut(s)	56
PflMI	CCANNNNNTGG	1 cut(s)	2268
PfoI	TCCNGGA	1 cut(s)	59
PkrI	GCNGC	7 cut(s)	1025, 1552, 3525, 3528, 3609, 3802, 3984
Ple19I	CGATCG	1 cut(s)	1410
PleI	GAGTC	6 cut(s)	2271, 2999, 3526, 3559, 3869, 3878
PmeI	GTTTAAAC	1 cut(s)	3153
PpsI	GAGTC	6 cut(s)	2271, 2999, 3526, 3559, 3869, 3878
Ppu21I	YACGTR	1 cut(s)	2803
PshBI	ATTAAT	4 cut(s)	254, 266, 408, 3089
PsiI	TTATAA	2 cut(s)	1424, 1767
Psp124BI	GAGCTC	1 cut(s)	2024
PspEI	GGTNACC	1 cut(s)	2408
PspOMI	GGGCCC	3 cut(s)	1985, 2223, 2348
PstNI	CAGNNNCTG	1 cut(s)	164
PsuI	RGATCY	4 cut(s)	2174, 2198, 2537, 2561
PvuI	CGATCG	1 cut(s)	1410
PvuII	CAGCTG	1 cut(s)	3538
RseI	CAYNNNNRTG	1 cut(s)	3977
SacI	GAGCTC	1 cut(s)	2024
SatI	GCNGC	7 cut(s)	1024, 1551, 3524, 3527, 3608, 3801, 3983
ScaI	AGTACT	1 cut(s)	3590
SchI	GAGTC	6 cut(s)	2271, 3000, 3526, 3560, 3870, 3878
SduI	GDGCHC	8 cut(s)	425, 1989, 2024, 2227, 2258, 2275, 2352, 3693
SfaNI	GCATC	3 cut(s)	834, 1020, 3766
SfcI	CTRYAG	1 cut(s)	2284
SinI	GGWCC	2 cut(s)	3250, 3667
SmiI	ATTTAAAT	1 cut(s)	786
SmiMI	CAYNNNNRTG	1 cut(s)	3977
SmlI	CTYRAG	3 cut(s)	3592, 3696, 3888
SmoI	CTYRAG	3 cut(s)	3592, 3696, 3888
SseBI	AGGCCT	2 cut(s)	1095, 2130
SsiI	CCGC	7 cut(s)	1026, 2341, 2929, 3461, 3527, 3608, 3749
SspI	AATATT	7 cut(s)	287, 327, 708, 847, 1241, 1429, 3057
SspMI	CTAG	7 cut(s)	101, 1760, 2067, 2657, 2789, 3272, 3276
SstI	GAGCTC	1 cut(s)	2024
StuI	AGGCCT	2 cut(s)	1095, 2130
StyI	CCWWGG	4 cut(s)	1090, 3072, 3684, 3894
SwaI	ATTTAAAT	1 cut(s)	786
TaaI	ACNGT	2 cut(s)	2006, 2781
TaiI	ACGT	3 cut(s)	2233, 2805, 3023
TatI	WGTACW	6 cut(s)	476, 573, 2155, 2518, 3161, 3588
TauI	GCSGC	2 cut(s)	3529, 3610
TfiI	GAWTC	1 cut(s)	56
TscAI	CASTG	5 cut(s)	1978, 2119, 2482, 3342, 3786
TseFI	GTSAC	6 cut(s)	1064, 1332, 1957, 2238, 2408, 3552
TseI	GCWGC	5 cut(s)	1023, 1550, 3523, 3800, 3982
Tsp45I	GTSAC	6 cut(s)	1064, 1332, 1957, 2238, 2408, 3552
TspGWI	ACGGA	1 cut(s)	3900
TspRI	CASTG	5 cut(s)	1978, 2119, 2482, 3342, 3786
Van91I	CCANNNNNTGG	1 cut(s)	2268
VneI	GTGCAC	1 cut(s)	3689
VpaK11BI	GGWCC	2 cut(s)	3250, 3667
VspI	ATTAAT	4 cut(s)	254, 266, 408, 3089
XbaI	TCTAGA	2 cut(s)	1759, 2656
XceI	RCATGY	3 cut(s)	1117, 2156, 2519
XmiI	GTMKAC	3 cut(s)	1578, 2799, 3437
XspI	CTAG	7 cut(s)	101, 1760, 2067, 2657, 2789, 3272, 3276
ZraI	GACGTC	1 cut(s)	2231
ZrmI	AGTACT	1 cut(s)	3590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.