pycom03g22040

Protein TRANSPORT INHIBITOR RESPONSE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0011947
Physical Location & Seq
Reverse (-)
22215511 .. 22218313
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1581 bp
ATGCTGATCAGGCGGTTCCCGGACGTTAGATCCATTGAGCTCAAAGGAAAGCCTCACTTCGCCGACTTCAATCTGGTCCCGGAAGGCTGGGGTGGGTACGTGTACCCTTGGATCGCCGCCATGGCCAGCGCCTACCCTTGGCTTGAAGAGATCAAGCTCAAGAGGATGGTCGTCACCGACGAGACCTTGGAGCTGATTGCCAAGTCCTTCAAGAATATGAAGCTCCTCGTGCTTTCGTCCTGTGAGGGATTCAGTACTGACGGACTCGCCGCCATTGCTGCCAATTGCAGGAATCTACGGGAGCTGGACTTGCATGAGAGCGATGTGGAGGACCTGAGTGGGCATTGGCTCAGCCATTTTCCTGATATGTACACGTCACTTGTGTCCCTTAACATTGCTTGCTTGGGGTCTGAGTTGAGTTTCTCTGCCCTGGAGCGCCTGGTGGCTAGGTGTCCCAACCTGAGGAGTCTCCGGCTCAATCGTTCCGTGCCTCTTGACAGGCTAGCCAATCTACTTCGCCTGGCACCTAGGCTGACTGATTTAGGCACAGGGGCCTACTCAGCTGAGTGGCGGCCTGATGTCTTTGCAATCCTATCACGTGCCATCTCAGGATGCAAGGAACTCAAGAGCCTATCTGGATTTTGGGATGTGGTACCATCATATCTTCCAGCTATTTATTCGATCTGCCCTGGGCTAACATCACTAAATTTGAGTTATGCCACAATTCAAAGCCCGGCTCTTGTAAAGCTTGTTAGCCAATGCCCGAATCTGCAGCGCCTCTGGGTATTGGATTACATTGAAGATGTTGGCCTTGATGCCCTGGCGGAATCTTGCAAGGATCTACGAGAGTTAAGGGTGTTTCCCTCAGATCCATTTGTGGTGGAACCAAATGTGTCCTTGACAGAGCAGGGCCTCATATCTGTTTCTGAGGGCTGTCCAAAGCTCCACTCAGTTCTGTACTTCTGCCGGCAAATGTCCAATGATGCATTAATCACCATTGCTAGGAACCAGCCTAACTTTACATGTTTTCGTCTTTGCATAATTGAGCCCAAAATTCCCGACTACCTGACCCTTCAGCCCTTTGATGTGGGTTTTGGGGCCATTGTTGAGAACTGCAAGAATCTCCCGCGATTGTCCGTCTCTGGTCTACTAACTGATCAAGCATTTGATTATATCGGAACCTATGGTAAAAAGTTGGAGATGCTGTCTATAGCCTTTGCTGGAGATAGTGACTTGGGGCTTCATCATATATTGTCTGGGTGCGATAATCTTCGGAAATTGGAGATCAGGGACTGTCCTTTTGGTGACAAGGCTCTTTTGGCCAATGCTGCAAAGCTGGAGACAATTCGATCCCTTTGGATGTCTTCATGCTCGGTGAGTTATGGAGCATGTAAGCTACTTGGCCAGAGGTTGCCGAGGCTTAATGTTGAAGTTATTGATGAGAGGGGGCACCCAGAATCCAGGCCGGAGAACTCTCCCGTTGAAAAGCTCTACATCTATAGGTCCGTTGCAGGGCCAAGGTTTGACATGCCTGGTTTTGTTTGGACCATGGATGAAGATTCGGCATTGAGGGTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0000822 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006464 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0009267 GO:0009555 GO:0009605 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0009987 GO:0009991 GO:0010011 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010152 GO:0010311 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016036 GO:0016567 GO:0016740 GO:0019005 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022622 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031461 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0032446 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033554 GO:0036094 GO:0036211 GO:0038023 GO:0038198 GO:0042221 GO:0042562 GO:0042594 GO:0043167 GO:0043168 GO:0043170 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045013 GO:0045014 GO:0045892 GO:0045934 GO:0045990 GO:0046015 GO:0048229 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060089 GO:0060255 GO:0061458 GO:0061984 GO:0061985 GO:0061986 GO:0065007 GO:0070647 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071496 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:1990234 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box F-box-like LRR_6

Protein Analysis

527

Amino Acids

58.7

Weight (kDa)

5.65

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transp_inhibit PF18791 7 - 53 2.9e-26 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011947)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62980
fragaria_vesca FvH4_2g24840
malus_domestica MD03G1276700.v1.1 MD11G1299000.v1.1
prunus_persica Prupe.8G253300_v2.0.a1
pyrus_communis pycom03g22040 pycom10g25620 pycom11g26270 pycom17g00400
rosa_chinensis RchiOBHm_Chr6g0292661
rosa_laevigata RLG00000011999
rosa_multiflora Rmu_sc0000515.1_g000020
rosa_roxburghii Rroxscaffold_7G00174780
rosa_rugosa Rorug06G0228900
rosa_samantha Rh6AG342200 Rh6BG349500 Rh6CG356400 Rh6DG342500
rosa_wichuraiana Rw6G029830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 652
AccB1I GGYRCC 3 cut(s) 523, 652, 1449
AccI GTMKAC 1 cut(s) 1147
AccII CGCG 1 cut(s) 1129
AciI CCGC 6 cut(s) 13, 117, 270, 571, 824, 1127
AclWI GGATC 5 cut(s) 24, 119, 846, 863, 1344
AcoI YGGCCR 3 cut(s) 123, 1320, 1402
AcsI RAATTY 2 cut(s) 706, 1053
AcuI CTGAAG 1 cut(s) 1058
AcvI CACGTG 1 cut(s) 599
AfaI GTAC 6 cut(s) 98, 104, 256, 371, 654, 959
AfiI CCNNNNNNNGG 5 cut(s) 138, 288, 462, 1002, 1512
AflIII ACRYGT 3 cut(s) 99, 372, 1022
AgsI TTSAA 7 cut(s) 70, 146, 211, 728, 800, 1430, 1484
AjiI CACGTC 1 cut(s) 375
AjnI CCWGG 7 cut(s) 429, 438, 519, 688, 819, 1460, 1531
Alw21I GWGCWC 1 cut(s) 42
Alw26I GTCTC 4 cut(s) 176, 473, 1144, 1334
AlwI GGATC 5 cut(s) 24, 119, 846, 863, 1344
AlwNI CAGNNNCTG 1 cut(s) 1293
ApeKI GCWGC 3 cut(s) 278, 772, 1328
ApoI RAATTY 2 cut(s) 706, 1053
ArsI GACNNNNNNTTYG 2 cut(s) 1283, 1315
AseI ATTAAT 1 cut(s) 989
Asp718I GGTACC 1 cut(s) 652
AspA2I CCTAGG 1 cut(s) 527
AspLEI GCGC 3 cut(s) 131, 438, 777
AspS9I GGNCC 8 cut(s) 76, 331, 552, 910, 1098, 1503, 1514, 1545
AsuC2I CCSGG 3 cut(s) 20, 80, 734
AsuHPI GGTGA 4 cut(s) 166, 985, 1316, 1387
AsuNHI GCTAGC 1 cut(s) 502
AvaII GGWCC 4 cut(s) 76, 331, 1503, 1545
AvrII CCTAGG 1 cut(s) 527
AxyI CCTNAGG 1 cut(s) 461
BaeGI GKGCMC 1 cut(s) 1452
BalI TGGCCA 3 cut(s) 125, 1322, 1404
BanI GGYRCC 3 cut(s) 523, 652, 1449
BanII GRGCYC 2 cut(s) 42, 1050
BauI CACGAG 1 cut(s) 227
BbrPI CACGTG 1 cut(s) 599
BbsI GAAGAC 1 cut(s) 1356
Bbv12I GWGCWC 1 cut(s) 42
BbvI GCAGC 3 cut(s) 265, 784, 1315
BccI CCATC 3 cut(s) 160, 611, 664
BciT130I CCWGG 7 cut(s) 431, 440, 521, 690, 821, 1462, 1533
BclI TGATCA 2 cut(s) 6, 1156
BcnI CCSGG 3 cut(s) 20, 80, 734
BcoDI GTCTC 4 cut(s) 176, 473, 1144, 1334
BfaI CTAG 4 cut(s) 447, 503, 528, 1002
BfmI CTRYAG 3 cut(s) 770, 1209, 1498
BfoI RGCGCY 3 cut(s) 132, 439, 778
BglI GCCNNNNNGGC 1 cut(s) 122
BisI GCNGC 6 cut(s) 117, 270, 279, 572, 773, 1329
BlnI CCTAGG 1 cut(s) 527
BlpI GCTNAGC 1 cut(s) 350
BlsI GCNGC 6 cut(s) 118, 271, 280, 573, 774, 1330
BmcAI AGTACT 1 cut(s) 256
Bme18I GGWCC 4 cut(s) 76, 331, 1503, 1545
BmgBI CACGTC 1 cut(s) 375
BmgT120I GGNCC 8 cut(s) 76, 331, 552, 910, 1098, 1503, 1514, 1545
BmsI GCATC 4 cut(s) 602, 805, 973, 1191
BmtI GCTAGC 1 cut(s) 506
BpiI GAAGAC 1 cut(s) 1356
BpmI CTGGAG 3 cut(s) 452, 1242, 1358
Bpu1102I GCTNAGC 1 cut(s) 350
BpuEI CTTGAG 2 cut(s) 143, 608
BpuMI CCSGG 3 cut(s) 20, 80, 734
BsaAI YACGTR 2 cut(s) 100, 599
BsaI GGTCTC 1 cut(s) 176
BsaXI ACNNNNNCTCC 2 cut(s) 1190, 1220
Bsc4I CCNNNNNNNGG 5 cut(s) 138, 288, 462, 1002, 1512
Bse118I RCCGGY 1 cut(s) 966
Bse21I CCTNAGG 1 cut(s) 461
Bse3DI GCAATG 3 cut(s) 273, 393, 996
BseBI CCWGG 7 cut(s) 431, 440, 521, 690, 821, 1462, 1533
BseGI GGATG 5 cut(s) 171, 617, 652, 1365, 1558
BseLI CCNNNNNNNGG 5 cut(s) 138, 288, 462, 1002, 1512
BseMI GCAATG 3 cut(s) 273, 393, 996
BseRI GAGGAG 2 cut(s) 215, 478
BseSI GKGCMC 1 cut(s) 1452
BseXI GCAGC 3 cut(s) 265, 784, 1315
BseYI CCCAGC 1 cut(s) 87
Bsh1236I CGCG 1 cut(s) 1129
BshNI GGYRCC 3 cut(s) 523, 652, 1449
BsiHKAI GWGCWC 1 cut(s) 42
BsiSI CCGG 6 cut(s) 20, 80, 472, 734, 967, 1466
BslFI GGGAC 4 cut(s) 62, 370, 438, 1304
BslI CCNNNNNNNGG 5 cut(s) 138, 288, 462, 1002, 1512
BsmAI GTCTC 4 cut(s) 176, 473, 1144, 1334
BsmBI CGTCTC 1 cut(s) 1144
BsmFI GGGAC 4 cut(s) 62, 370, 438, 1304
Bso31I GGTCTC 1 cut(s) 176
Bsp1286I GDGCHC 3 cut(s) 42, 1050, 1452
Bsp1407I TGTACA 1 cut(s) 369
Bsp1720I GCTNAGC 1 cut(s) 350
Bsp19I CCATGG 2 cut(s) 120, 1548
BspACI CCGC 6 cut(s) 13, 117, 270, 571, 824, 1127
BspFNI CGCG 1 cut(s) 1129
BspMAI CTGCAG 1 cut(s) 774
BspOI GCTAGC 1 cut(s) 506
BspPI GGATC 5 cut(s) 24, 119, 846, 863, 1344
BspT107I GGYRCC 3 cut(s) 523, 652, 1449
BspTNI GGTCTC 1 cut(s) 176
BsrDI GCAATG 3 cut(s) 273, 393, 996
BsrFI RCCGGY 1 cut(s) 966
BsrGI TGTACA 1 cut(s) 369
BssAI RCCGGY 1 cut(s) 966
BssSI CACGAG 1 cut(s) 227
BssT1I CCWWGG 7 cut(s) 107, 120, 137, 186, 527, 1517, 1548
Bst2BI CACGAG 1 cut(s) 227
Bst2UI CCWGG 7 cut(s) 431, 440, 521, 690, 821, 1462, 1533
Bst4CI ACNGT 1 cut(s) 1295
Bst6I CTCTTC 1 cut(s) 141
BstAUI TGTACA 1 cut(s) 369
BstBAI YACGTR 2 cut(s) 100, 599
BstC8I GCNNGC 4 cut(s) 127, 400, 504, 968
BstDSI CCRYGG 2 cut(s) 120, 1548
BstF5I GGATG 5 cut(s) 171, 617, 652, 1365, 1558
BstFNI CGCG 1 cut(s) 1129
BstH2I RGCGCY 3 cut(s) 132, 439, 778
BstHHI GCGC 3 cut(s) 131, 438, 777
BstMAI GTCTC 4 cut(s) 176, 473, 1144, 1334
BstMWI GCNNNNNNNGC 9 cut(s) 10, 122, 229, 275, 278, 310, 560, 1319, 1328
BstNI CCWGG 7 cut(s) 431, 440, 521, 690, 821, 1462, 1533
BstNSI RCATGY 3 cut(s) 1026, 1392, 1531
BstSFI CTRYAG 3 cut(s) 770, 1209, 1498
BstSLI GKGCMC 1 cut(s) 1452
BstUI CGCG 1 cut(s) 1129
BstV1I GCAGC 3 cut(s) 265, 784, 1315
BstV2I GAAGAC 1 cut(s) 1356
BstX2I RGATCY 3 cut(s) 29, 838, 868
BstYI RGATCY 3 cut(s) 29, 838, 868
Bsu36I CCTNAGG 1 cut(s) 461
BtgI CCRYGG 2 cut(s) 120, 1548
BtgZI GCGATG 1 cut(s) 336
BtrI CACGTC 1 cut(s) 375
BtsCI GGATG 5 cut(s) 171, 617, 652, 1365, 1558
Cac8I GCNNGC 4 cut(s) 127, 400, 504, 968
CaiI CAGNNNCTG 1 cut(s) 1293
CfoI GCGC 3 cut(s) 131, 438, 777
Cfr10I RCCGGY 1 cut(s) 966
Cfr13I GGNCC 8 cut(s) 76, 331, 552, 910, 1098, 1503, 1514, 1545
Csp6I GTAC 6 cut(s) 97, 103, 255, 370, 653, 958
CviAII CATG 7 cut(s) 121, 314, 1023, 1368, 1389, 1528, 1549
CviQI GTAC 6 cut(s) 97, 103, 255, 370, 653, 958
EaeI YGGCCR 3 cut(s) 123, 1320, 1402
Eam1104I CTCTTC 1 cut(s) 141
EarI CTCTTC 1 cut(s) 141
EciI GGCGGA 1 cut(s) 839
Ecl136II GAGCTC 1 cut(s) 40
Eco130I CCWWGG 7 cut(s) 107, 120, 137, 186, 527, 1517, 1548
Eco24I GRGCYC 2 cut(s) 42, 1050
Eco31I GGTCTC 1 cut(s) 176
Eco47I GGWCC 4 cut(s) 76, 331, 1503, 1545
Eco53kI GAGCTC 1 cut(s) 40
Eco57I CTGAAG 1 cut(s) 1058
Eco72I CACGTG 1 cut(s) 599
Eco81I CCTNAGG 1 cut(s) 461
EcoICRI GAGCTC 1 cut(s) 40
EcoO109I RGGNCCY 3 cut(s) 331, 552, 910
EcoRII CCWGG 7 cut(s) 429, 438, 519, 688, 819, 1460, 1531
EcoT14I CCWWGG 7 cut(s) 107, 120, 137, 186, 527, 1517, 1548
EcoT22I ATGCAT 1 cut(s) 988
EcoT38I GRGCYC 2 cut(s) 42, 1050
ErhI CCWWGG 7 cut(s) 107, 120, 137, 186, 527, 1517, 1548
Esp3I CGTCTC 1 cut(s) 1144
FaeI CATG 7 cut(s) 124, 317, 1026, 1371, 1392, 1531, 1552
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FaqI GGGAC 4 cut(s) 62, 370, 438, 1304
FatI CATG 7 cut(s) 120, 313, 1022, 1367, 1388, 1527, 1548
FauI CCCGC 1 cut(s) 1134
FbaI TGATCA 2 cut(s) 6, 1156
FblI GTMKAC 1 cut(s) 1147
Fnu4HI GCNGC 6 cut(s) 117, 270, 279, 572, 773, 1329
FokI GGATG 5 cut(s) 178, 624, 659, 1372, 1565
FriOI GRGCYC 2 cut(s) 42, 1050
Fsp4HI GCNGC 6 cut(s) 117, 270, 279, 572, 773, 1329
FspBI CTAG 4 cut(s) 447, 503, 528, 1002
GlaI GCGC 3 cut(s) 130, 437, 776
GluI GCNGC 6 cut(s) 117, 270, 279, 572, 773, 1329
GsaI CCCAGC 1 cut(s) 91
GsuI CTGGAG 3 cut(s) 452, 1242, 1358
HaeII RGCGCY 3 cut(s) 132, 439, 778
HapII CCGG 6 cut(s) 20, 80, 472, 734, 967, 1466
HhaI GCGC 3 cut(s) 131, 438, 777
Hin1II CATG 7 cut(s) 124, 317, 1026, 1371, 1392, 1531, 1552
Hin6I GCGC 3 cut(s) 129, 436, 775
HinP1I GCGC 3 cut(s) 129, 436, 775
HindIII AAGCTT 1 cut(s) 746
HinfI GANTC 9 cut(s) 249, 264, 292, 466, 766, 827, 1120, 1457, 1559
HpaII CCGG 6 cut(s) 20, 80, 472, 734, 967, 1466
HphI GGTGA 4 cut(s) 166, 985, 1316, 1387
Hpy166II GTNNAC 3 cut(s) 103, 372, 1148
Hpy188I TCNGA 5 cut(s) 412, 868, 928, 1178, 1275
Hpy188III TCNNGA 8 cut(s) 160, 211, 362, 494, 609, 625, 636, 1058
Hpy8I GTNNAC 3 cut(s) 103, 372, 1148
Hpy99I CGWCG 1 cut(s) 182
HpyAV CCTTC 3 cut(s) 77, 217, 1082
HpyCH4III ACNGT 1 cut(s) 1295
HpyCH4IV ACGT 4 cut(s) 24, 99, 374, 598
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 122, 229, 275, 278, 310, 560, 1319, 1328
HpySE526I ACGT 4 cut(s) 24, 99, 374, 598
Hsp92II CATG 7 cut(s) 124, 317, 1026, 1371, 1392, 1531, 1552
HspAI GCGC 3 cut(s) 129, 436, 775
KpnI GGTACC 1 cut(s) 656
KroI GCCGGC 1 cut(s) 966
KroNI GCCGGC 1 cut(s) 968
Ksp22I TGATCA 2 cut(s) 6, 1156
LmnI GCTCC 6 cut(s) 190, 228, 301, 433, 948, 1385
Lsp1109I GCAGC 3 cut(s) 265, 784, 1315
LweI GCATC 4 cut(s) 602, 805, 973, 1191
MaeI CTAG 4 cut(s) 447, 503, 528, 1002
MaeII ACGT 4 cut(s) 24, 99, 374, 598
MaeIII GTNAC 5 cut(s) 172, 375, 1229, 1304, 1573
MboII GAAGA 6 cut(s) 158, 656, 812, 1262, 1356, 1568
MfeI CAATTG 1 cut(s) 283
MflI RGATCY 3 cut(s) 29, 838, 868
MhlI GDGCHC 3 cut(s) 42, 1050, 1452
MlsI TGGCCA 3 cut(s) 125, 1322, 1404
MluCI AATT 7 cut(s) 283, 706, 723, 1041, 1053, 1277, 1344
MluNI TGGCCA 3 cut(s) 125, 1322, 1404
MlyI GAGTC 2 cut(s) 258, 475
MmeI TCCRAC 1 cut(s) 1176
Mox20I TGGCCA 3 cut(s) 125, 1322, 1404
Mph1103I ATGCAT 1 cut(s) 988
MroNI GCCGGC 1 cut(s) 966
MscI TGGCCA 3 cut(s) 125, 1322, 1404
MseI TTAA 4 cut(s) 390, 851, 989, 1422
Msp20I TGGCCA 3 cut(s) 125, 1322, 1404
MspA1I CMGCKG 1 cut(s) 563
MspI CCGG 6 cut(s) 20, 80, 472, 734, 967, 1466
MunI CAATTG 1 cut(s) 283
MvaI CCWGG 7 cut(s) 431, 440, 521, 690, 821, 1462, 1533
MvnI CGCG 1 cut(s) 1129
MwoI GCNNNNNNNGC 9 cut(s) 10, 122, 229, 275, 278, 310, 560, 1319, 1328
NaeI GCCGGC 1 cut(s) 968
NciI CCSGG 3 cut(s) 20, 80, 734
NcoI CCATGG 2 cut(s) 120, 1548
NgoMIV GCCGGC 1 cut(s) 966
NheI GCTAGC 1 cut(s) 502
NlaIII CATG 7 cut(s) 124, 317, 1026, 1371, 1392, 1531, 1552
NmeAIII GCCGAG 1 cut(s) 1440
NmuCI GTSAC 4 cut(s) 172, 375, 1229, 1304
NsiI ATGCAT 1 cut(s) 988
NspI RCATGY 3 cut(s) 1026, 1392, 1531
PasI CCCWGGG 1 cut(s) 689
PciI ACATGT 1 cut(s) 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 177
PdiI GCCGGC 1 cut(s) 968
PfeI GAWTC 7 cut(s) 249, 292, 766, 827, 1120, 1457, 1559
PfoI TCCNGGA 2 cut(s) 18, 78
PkrI GCNGC 6 cut(s) 118, 271, 280, 573, 774, 1330
PleI GAGTC 2 cut(s) 258, 474
PmaCI CACGTG 1 cut(s) 599
PmlI CACGTG 1 cut(s) 599
PpsI GAGTC 2 cut(s) 258, 474
Ppu21I YACGTR 2 cut(s) 100, 599
PpuMI RGGWCCY 1 cut(s) 331
PscI ACATGT 1 cut(s) 1022
PshBI ATTAAT 1 cut(s) 989
Psp124BI GAGCTC 1 cut(s) 42
Psp5II RGGWCCY 1 cut(s) 331
Psp6I CCWGG 7 cut(s) 429, 438, 519, 688, 819, 1460, 1531
PspCI CACGTG 1 cut(s) 599
PspFI CCCAGC 1 cut(s) 87
PspGI CCWGG 7 cut(s) 429, 438, 519, 688, 819, 1460, 1531
PspPI GGNCC 8 cut(s) 76, 331, 552, 910, 1098, 1503, 1514, 1545
PspPPI RGGWCCY 1 cut(s) 331
PstI CTGCAG 1 cut(s) 774
PstNI CAGNNNCTG 1 cut(s) 1293
PsuI RGATCY 3 cut(s) 29, 838, 868
PvuII CAGCTG 1 cut(s) 563
RsaI GTAC 6 cut(s) 98, 104, 256, 371, 654, 959
RsaNI GTAC 6 cut(s) 97, 103, 255, 370, 653, 958
SacI GAGCTC 1 cut(s) 42
SaqAI TTAA 4 cut(s) 390, 851, 989, 1422
SatI GCNGC 6 cut(s) 117, 270, 279, 572, 773, 1329
Sau96I GGNCC 8 cut(s) 76, 331, 552, 910, 1098, 1503, 1514, 1545
ScaI AGTACT 1 cut(s) 256
SchI GAGTC 2 cut(s) 258, 475
SduI GDGCHC 3 cut(s) 42, 1050, 1452
SfaNI GCATC 4 cut(s) 602, 805, 973, 1191
SfcI CTRYAG 3 cut(s) 770, 1209, 1498
SinI GGWCC 4 cut(s) 76, 331, 1503, 1545
SmlI CTYRAG 2 cut(s) 158, 623
SmoI CTYRAG 2 cut(s) 158, 623
Sse9I AATT 7 cut(s) 283, 706, 723, 1041, 1053, 1277, 1344
SsiI CCGC 6 cut(s) 13, 117, 270, 571, 824, 1127
SspMI CTAG 4 cut(s) 447, 503, 528, 1002
SstI GAGCTC 1 cut(s) 42
StyI CCWWGG 7 cut(s) 107, 120, 137, 186, 527, 1517, 1548
TaaI ACNGT 1 cut(s) 1295
TaiI ACGT 4 cut(s) 27, 102, 377, 601
TaqI TCGA 2 cut(s) 680, 1348
TasI AATT 7 cut(s) 283, 706, 723, 1041, 1053, 1277, 1344
TatI WGTACW 3 cut(s) 254, 369, 957
TauI GCSGC 3 cut(s) 119, 272, 574
TfiI GAWTC 7 cut(s) 249, 292, 766, 827, 1120, 1457, 1559
Tru1I TTAA 4 cut(s) 390, 851, 989, 1422
Tru9I TTAA 4 cut(s) 390, 851, 989, 1422
TseFI GTSAC 4 cut(s) 172, 375, 1229, 1304
TseI GCWGC 3 cut(s) 278, 772, 1328
Tsp45I GTSAC 4 cut(s) 172, 375, 1229, 1304
TspDTI ATGAA 4 cut(s) 233, 1232, 1356, 1569
TspGWI ACGGA 4 cut(s) 276, 475, 1126, 1495
VpaK11BI GGWCC 4 cut(s) 76, 331, 1503, 1545
VspI ATTAAT 1 cut(s) 989
XapI RAATTY 2 cut(s) 706, 1053
XceI RCATGY 3 cut(s) 1026, 1392, 1531
XmaJI CCTAGG 1 cut(s) 527
XmiI GTMKAC 1 cut(s) 1147
XspI CTAG 4 cut(s) 447, 503, 528, 1002
ZrmI AGTACT 1 cut(s) 256
Zsp2I ATGCAT 1 cut(s) 988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.