Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0008420

Physical Location & Seq

Genomic Coordinates Forward (+)

13427592 .. 13432556

Gene Structure 4965 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGAATGTGGTTGGCAGAGTTGGGAGCCTAATTTCCCAAGGTGTTTACTCTGTTGCCACCCCTTTTCATCCGTTTGGCGGGGCTGTTGATGTCATTGTGGTTCAGCAGCAGGATGGGACGTTTAGGAGCACGCCTTGGTATGTCCGGTTTGGTAAATTTCAGGGTGTTCTCAAAGGTGCGGAGAAGATGGTCCGCATCAATGTAAATGGCACAGATGCCAATTTCCATATGTATCTTGATAACTCCGGTGAGGCTTATTTTATAAAGGAGGTTGAATCGGGTAAAGTAAGTGAGATAAATGGGGTTGTCAAGGATTCTGAAAATTCAGAAGCTACACAAGGGGATAATACTTTCGATGGTGATGGCCAAAGTCATGAAATTCGTAGACTTGAGCACAGTTTCTCTGATTCTGTGGTGGTTGAAATGAGAGAGGAACACAATTCGTTTGGCGCAAAACGGATGGAGAAGGCTGAATCTGATGTTGATCGGAGGTTCTATGAATTTCAAGATGAGCAATCTTCTCTAGAGGGTTCTGTTGAGTTATCGGGGTATGGGTCTAGTCGATACGATAATCTAGACAGTGAGCGTATTGTGGAATCACAGAATTTAAACTCGGAAGTTATATTGGTGAGTGTAGATGGTCAAGTATTGACAGCTCCCATCTCAGCATCAGAACAGACCGCAGAGAATGTGGAATTAGACACACCTCGATTCAATCTGGGTCCAGGTGAAGAGACGGACTTCTGTGAAGGCACTGAGGAGTTTAGTTCAGGTGAAACTGCTTGGGCTGCTGATTATATCAGTAAGCTGAATGCATCTACAGCTAGTGTTGCTTCTGGGAATGTCAGCAGCGTCCAGAAGGATAATAATGTTATTGGACATCAGTTGGAAGTTGATGAAGGAGAAGGGGAATGTGCATGTCAAGCTCAAGAAACACAAAAGACTTCAACACAGGAAAGAGATCTTCAGGTGCATAGCAATTCAGAAGACACATCTGCTAACAAGGAAGATGTTTTCAAGTGCTGTTTGGAGCTAGAAGAAAAGGCCAAACATGAAGTGAAAGATGTTGAAAATATGGGGTCCTCATTGGAGGTTCAAAGTTCACCAGAAACATCTCATGAGACTCTTCCAGTGGTTGATAGAACTGAAGATGCTACTGTTGACTTGAGAAATAACGATGAGGTATCTGCATCTTCTGGTTCTGTTTCACCCGACAACAATATGCCTCCACATTTGGAAGTTGAAAATGAATCAATTGAGAAGATTGTGTGTTCTGCAGAACAAATGAGTATTGACAGCATTTCTGTACATTCTGTCAGTAATGATCCAGACTGGAAGGATGGACAGTGTGCTACATCAGCAGTGGTTGATGGGACAGAAATTAATCAACAAAGACCTGAAAGTGTAGATGAATGCAGTAAAAGTGAGCTAATAGAACCCCCAACAGAATCTTCAAGCGAAGAAACACAAAATGAGCTAATAGAACCCCCACCAGAATCGTCAAGTGAAGAAATACAAGTCCATTCAAGCATAAGGTTTGAGATTTCTCTCTGTGCGAATGAACTTCGTCCGGGTATGGGGGTGAAAGCTGCTGCTGAAACCTTTGCTGCGCATCGTGTATCTGCAGAGGATTTTATAACTTCTGCAACATCAATTTTGAAAAATGAAAATCTGATTGTCAGATATAGGGAAAGATACTTTTCGTGGGAAAAAGCAGCTCCTGCTGTTCTTGGAATGGCTGCTTTTAATCTAGATTTATCTGTTGAGCCTGAGGATGCAATTCCTGTCGAACAAGATGGCTCAGAAAAAACAAGGAATGAGGATCCTGGAACGCCCTCCACTCCTTCTGGACGCAGATGGAGGCTCTGGCCCATTCCATTTAGGAGGGTCGAAACACTTGAGCACACCGACAGTAATTCATCAAATGAGGATGAATTTGTTGATTCTGAATCTGGTCTGCAGAACTCACAAGTTGAAACGGTTCCTGAGTCCCCTCAGAAGCAATTTATAAGGACAAATGTTCCCACCACGGAGCAGATAGCATCTTTAAATCTCAAAGAAGGTCAAAATATGATAACTTTCAGTTTCTCTACAAGGGTTTGGGGGACACAACAGGTTGATGCACATATATACTTGTGGAAATGGAATGCCAGAATTGTAATTTCTGATGTTGATGGAACTATTACTAAGTCGGATGTGTTAGGTCAGTTCATGCCATTAGTTGGAAAGGATTGGACGCATACTGGTGTGTCTAGACTTTTCTCTGCGATTAAGGAAAATGGATATCAGCTACTGTTTTTGAGTGCACGTGCAATCGTACAGGCATATCTAACGAGAAGCTTTTTACTCAACCTAAAACAGGATGGAAAAGCTTTACCCAATGGACCTGTTGTTATCTCACCTGATGGATTATTTCCTTCATTGTTTCGTGAAGTTGTAAGAAGAGCACCACATGAATTCAAAATTGCCTGTTTAGAGGACATTAAAAAACTCTTCCCTGCCGATTACAATCCATTCTATGCAGGATTTGGAAATAGAGACACGGATGAGCTCAGCTACAGGAAAATTGGGATTCCAAAGGGCAAAATATTCATAATCAATCCCAAGGGTGAGGTGGCCCTCAGCCATCATCCCGTTGATGTGAAGACGTACACATCTTTGCACACTCTTGTCAACGACATGTTTCCTCCAACTTCACTGGTTGAGCAGGAAGACTTCAACTCGTGGAACTACTGGAAAGTGCCATTGCCGGAAATTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000322 GO:0000325 GO:0000326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0006810 GO:0006886 GO:0006950 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009267 GO:0009605 GO:0009705 GO:0009987 GO:0009991 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016036 GO:0019374 GO:0019375 GO:0019637 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032586 GO:0033036 GO:0033554 GO:0034613 GO:0042594 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046467 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0070727 GO:0071496 GO:0071702 GO:0071704 GO:0071705 GO:0090407 GO:0098588 GO:0098791 GO:0098805 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

LNS2 Lipin_N Lipin_mid

Protein Analysis

921

Amino Acids

102.08

Weight (kDa)

4.58

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipin_N	PF04571	1 - 94	9.4e-31	lipin, N-terminal conserved region
Lipin_mid	PF16876	513 - 604	5.8e-17	Lipin/Ned1/Smp2 multi-domain protein middle domain
LNS2	PF08235	673 - 896	1.1e-96	LNS2 (Lipin/Ned1/Smp2)
LNS2_PITM1-3	PF24694	720 - 866	1.9e-06	PITM 1-3, LNS2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09560 AT3G09560 AT3G09560 AT3G09560 AT5G42870
fragaria_vesca	FvH4_6g14720
malus_domestica	MD04G1116800.v1.1 MD12G1132500.v1.1
prunus_persica	Prupe.6G246600_v2.0.a1 Prupe.6G246600_v2.0.a1
pyrus_communis	pycom04g10670 pycom12g12830
rosa_chinensis	RchiOBHm_Chr3g0467941
rosa_laevigata	RLG00000024465
rosa_multiflora	Rmu_sc0001793.1_g000056 Rmu_sc0006017.1_g000005
rosa_roxburghii	Rroxscaffold_6G00413270
rosa_rugosa	Rorug03G0090600
rosa_samantha	Rh3AG139100 Rh3BG160700 Rh3CG160600 Rh3DG161200
rosa_wichuraiana	Rw3G013170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	263, 1637, 2009
Acc16I	TGCGCA	1 cut(s)	1611
AccB7I	CCANNNNNTGG	1 cut(s)	2222
AccI	GTMKAC	1 cut(s)	385
AciI	CCGC	4 cut(s)	78, 179, 193, 681
AclWI	GGATC	3 cut(s)	1319, 1817, 1830
AcoI	YGGCCR	1 cut(s)	364
AcsI	RAATTY	7 cut(s)	155, 322, 378, 500, 604, 1934, 2456
AcuI	CTGAAG	2 cut(s)	950, 1167
AcvI	CACGTG	1 cut(s)	2309
AfaI	GTAC	3 cut(s)	1308, 2319, 2651
AfiI	CCNNNNNNNGG	4 cut(s)	77, 1577, 2222, 2359
AflIII	ACRYGT	1 cut(s)	2679
AjnI	CCWGG	2 cut(s)	724, 1825
AjuI	GAANNNNNNNTTGG	2 cut(s)	1435, 1467
Alw21I	GWGCWC	6 cut(s)	131, 396, 1905, 2308, 2449, 2553
Alw26I	GTCTC	3 cut(s)	728, 1115, 2532
Alw44I	GTGCAC	1 cut(s)	2304
AlwI	GGATC	3 cut(s)	1319, 1817, 1830
AlwNI	CAGNNNCTG	2 cut(s)	1721, 2293
AoxI	GGCC	4 cut(s)	364, 1044, 1868, 2616
ApaLI	GTGCAC	1 cut(s)	2304
ApeKI	GCWGC	8 cut(s)	106, 788, 849, 1589, 1592, 1607, 1715, 1739
ApoI	RAATTY	7 cut(s)	155, 322, 378, 500, 604, 1934, 2456
AseI	ATTAAT	1 cut(s)	1383
Asp700I	GAANNNNTTC	1 cut(s)	1980
AspLEI	GCGC	2 cut(s)	452, 1612
AspS9I	GGNCC	6 cut(s)	190, 722, 1080, 1869, 2384, 2617
AsuC2I	CCSGG	1 cut(s)	1572
AvaII	GGWCC	4 cut(s)	190, 722, 1080, 2384
AxyI	CCTNAGG	1 cut(s)	1770
BaeGI	GKGCMC	1 cut(s)	2308
BalI	TGGCCA	1 cut(s)	366
BamHI	GGATCC	1 cut(s)	1822
BanII	GRGCYC	1 cut(s)	2553
BauI	CACGAG	1 cut(s)	2722
BbrPI	CACGTG	1 cut(s)	2309
BbsI	GAAGAC	3 cut(s)	993, 2651, 2718
Bbv12I	GWGCWC	6 cut(s)	131, 396, 1905, 2308, 2449, 2553
BbvCI	CCTCAGC	1 cut(s)	2621
BbvI	GCAGC	8 cut(s)	118, 775, 861, 1576, 1579, 1594, 1726, 1727
BciT130I	CCWGG	2 cut(s)	726, 1827
BcnI	CCSGG	1 cut(s)	1572
BcoDI	GTCTC	3 cut(s)	728, 1115, 2532
BfaI	CTAG	7 cut(s)	524, 558, 575, 825, 1034, 1751, 2253
BfmI	CTRYAG	5 cut(s)	819, 1275, 1623, 1958, 2557
BglII	AGATCT	1 cut(s)	961
BisI	GCNGC	8 cut(s)	107, 789, 850, 1590, 1593, 1608, 1716, 1740
BlpI	GCTNAGC	1 cut(s)	2552
BlsI	GCNGC	8 cut(s)	108, 790, 851, 1591, 1594, 1609, 1717, 1741
Bme1390I	CCNGG	3 cut(s)	726, 1572, 1827
Bme18I	GGWCC	4 cut(s)	190, 722, 1080, 2384
BmgT120I	GGNCC	6 cut(s)	190, 722, 1080, 1869, 2384, 2617
BmiI	GGNNCC	5 cut(s)	26, 723, 1081, 1824, 1983
BmrFI	CCNGG	3 cut(s)	726, 1572, 1827
BpiI	GAAGAC	3 cut(s)	993, 2651, 2718
Bpu10I	CCTNAGC	1 cut(s)	2621
Bpu1102I	GCTNAGC	1 cut(s)	2552
BpuEI	CTTGAG	4 cut(s)	410, 912, 1186, 1919
BpuMI	CCSGG	1 cut(s)	1572
BsaAI	YACGTR	1 cut(s)	2309
BsaBI	GATNNNNATC	2 cut(s)	483, 2508
BsaJI	CCNNGG	4 cut(s)	37, 134, 2028, 2604
BsaWI	WCCGGW	2 cut(s)	144, 245
Bsc4I	CCNNNNNNNGG	4 cut(s)	77, 1577, 2222, 2359
Bse1I	ACTGG	5 cut(s)	1130, 1337, 2248, 2703, 2738
Bse21I	CCTNAGG	1 cut(s)	1770
Bse3DI	GCAATG	1 cut(s)	2744
Bse8I	GATNNNNATC	2 cut(s)	483, 2508
BseBI	CCWGG	2 cut(s)	726, 1827
BseDI	CCNNGG	4 cut(s)	37, 134, 2028, 2604
BseJI	GATNNNNATC	2 cut(s)	483, 2508
BseLI	CCNNNNNNNGG	4 cut(s)	77, 1577, 2222, 2359
BseMI	GCAATG	1 cut(s)	2744
BseMII	CTCAG	8 cut(s)	678, 747, 1761, 1815, 1977, 2009, 2566, 2635
BseNI	ACTGG	5 cut(s)	1130, 1337, 2248, 2703, 2738
BseRI	GAGGAG	1 cut(s)	773
BseSI	GKGCMC	1 cut(s)	2308
BseXI	GCAGC	8 cut(s)	118, 775, 861, 1576, 1579, 1594, 1726, 1727
BshFI	GGCC	4 cut(s)	366, 1046, 1870, 2618
BsiHKAI	GWGCWC	6 cut(s)	131, 396, 1905, 2308, 2449, 2553
BsiSI	CCGG	4 cut(s)	145, 246, 1571, 2750
BslFI	GGGAC	4 cut(s)	130, 1387, 1975, 2119
BslI	CCNNNNNNNGG	4 cut(s)	77, 1577, 2222, 2359
BsmAI	GTCTC	3 cut(s)	728, 1115, 2532
BsmBI	CGTCTC	1 cut(s)	728
BsmFI	GGGAC	4 cut(s)	130, 1387, 1975, 2119
BsmI	GAATGC	3 cut(s)	817, 1418, 2152
BsnI	GGCC	4 cut(s)	366, 1046, 1870, 2618
Bsp1286I	GDGCHC	6 cut(s)	131, 396, 1905, 2308, 2449, 2553
Bsp1407I	TGTACA	1 cut(s)	1306
Bsp143I	GATC	4 cut(s)	484, 961, 1324, 1822
Bsp1720I	GCTNAGC	1 cut(s)	2552
BspACI	CCGC	4 cut(s)	78, 179, 193, 681
BspANI	GGCC	4 cut(s)	366, 1046, 1870, 2618
BspCNI	CTCAG	8 cut(s)	677, 748, 1762, 1814, 1978, 2008, 2565, 2634
BspHI	TCATGA	2 cut(s)	373, 1117
BspLI	GGNNCC	5 cut(s)	26, 723, 1081, 1824, 1983
BspMAI	CTGCAG	3 cut(s)	1279, 1627, 1962
BspPI	GGATC	3 cut(s)	1319, 1817, 1830
BspQI	GCTCTTC	1 cut(s)	2437
BsrDI	GCAATG	1 cut(s)	2744
BsrGI	TGTACA	1 cut(s)	1306
BsrI	ACTGG	5 cut(s)	1130, 1337, 2248, 2703, 2738
BssECI	CCNNGG	4 cut(s)	37, 134, 2028, 2604
BssMI	GATC	4 cut(s)	484, 961, 1324, 1822
BssSI	CACGAG	1 cut(s)	2722
BssT1I	CCWWGG	3 cut(s)	37, 134, 2604
Bst2BI	CACGAG	1 cut(s)	2722
Bst2UI	CCWGG	2 cut(s)	726, 1827
Bst4CI	ACNGT	7 cut(s)	398, 581, 1159, 1347, 1913, 1981, 2295
Bst6I	CTCTTC	4 cut(s)	726, 1131, 2437, 2498
BstAPI	GCANNNNNTGC	1 cut(s)	1721
BstAUI	TGTACA	1 cut(s)	1306
BstBAI	YACGTR	1 cut(s)	2309
BstC8I	GCNNGC	1 cut(s)	131
BstDEI	CTNAG	9 cut(s)	664, 756, 1770, 1801, 1986, 1995, 2187, 2552, 2621
BstDSI	CCRYGG	1 cut(s)	2028
BstENI	CCTNNNNNAGG	1 cut(s)	2357
BstHHI	GCGC	2 cut(s)	452, 1612
BstKTI	GATC	4 cut(s)	487, 964, 1327, 1825
BstMAI	GTCTC	3 cut(s)	728, 1115, 2532
BstMBI	GATC	4 cut(s)	484, 961, 1324, 1822
BstMWI	GCNNNNNNNGC	6 cut(s)	788, 821, 830, 923, 1358, 1721
BstNI	CCWGG	2 cut(s)	726, 1827
BstNSI	RCATGY	2 cut(s)	921, 2683
BstSCI	CCNGG	3 cut(s)	724, 1570, 1825
BstSFI	CTRYAG	5 cut(s)	819, 1275, 1623, 1958, 2557
BstSLI	GKGCMC	1 cut(s)	2308
BstV1I	GCAGC	8 cut(s)	118, 775, 861, 1576, 1579, 1594, 1726, 1727
BstV2I	GAAGAC	3 cut(s)	993, 2651, 2718
BstX2I	RGATCY	2 cut(s)	961, 1822
BstYI	RGATCY	2 cut(s)	961, 1822
Bsu36I	CCTNAGG	1 cut(s)	1770
BsuRI	GGCC	4 cut(s)	366, 1046, 1870, 2618
BtgI	CCRYGG	1 cut(s)	2028
BtsI	GCAGTG	1 cut(s)	1368
BtsIMutI	CAGTG	6 cut(s)	586, 753, 1137, 1352, 1368, 2696
Cac8I	GCNNGC	1 cut(s)	131
CaiI	CAGNNNCTG	2 cut(s)	1721, 2293
CciI	TCATGA	2 cut(s)	373, 1117
CfoI	GCGC	2 cut(s)	452, 1612
Cfr13I	GGNCC	6 cut(s)	190, 722, 1080, 1869, 2384, 2617
CseI	GACGC	3 cut(s)	841, 1860, 2245
Csp6I	GTAC	3 cut(s)	1307, 2318, 2650
CviAII	CATG	7 cut(s)	374, 918, 1052, 1118, 2212, 2453, 2680
CviQI	GTAC	3 cut(s)	1307, 2318, 2650
DdeI	CTNAG	9 cut(s)	664, 756, 1770, 1801, 1986, 1995, 2187, 2552, 2621
DpnI	GATC	4 cut(s)	486, 963, 1326, 1824
DpnII	GATC	4 cut(s)	484, 961, 1324, 1822
DraI	TTTAAA	2 cut(s)	609, 2049
EaeI	YGGCCR	1 cut(s)	364
Eam1104I	CTCTTC	4 cut(s)	726, 1131, 2437, 2498
EarI	CTCTTC	4 cut(s)	726, 1131, 2437, 2498
Ecl136II	GAGCTC	1 cut(s)	2551
Eco130I	CCWWGG	3 cut(s)	37, 134, 2604
Eco24I	GRGCYC	1 cut(s)	2553
Eco32I	GATATC	1 cut(s)	2285
Eco47I	GGWCC	4 cut(s)	190, 722, 1080, 2384
Eco53kI	GAGCTC	1 cut(s)	2551
Eco57I	CTGAAG	2 cut(s)	950, 1167
Eco72I	CACGTG	1 cut(s)	2309
Eco81I	CCTNAGG	1 cut(s)	1770
EcoICRI	GAGCTC	1 cut(s)	2551
EcoNI	CCTNNNNNAGG	1 cut(s)	2357
EcoO109I	RGGNCCY	1 cut(s)	1080
EcoRI	GAATTC	1 cut(s)	2456
EcoRII	CCWGG	2 cut(s)	724, 1825
EcoRV	GATATC	1 cut(s)	2285
EcoT14I	CCWWGG	3 cut(s)	37, 134, 2604
EcoT22I	ATGCAT	1 cut(s)	817
EcoT38I	GRGCYC	1 cut(s)	2553
ErhI	CCWWGG	3 cut(s)	37, 134, 2604
Esp3I	CGTCTC	1 cut(s)	728
FaeI	CATG	7 cut(s)	377, 921, 1055, 1121, 2215, 2456, 2683
FaqI	GGGAC	4 cut(s)	130, 1387, 1975, 2119
FatI	CATG	7 cut(s)	373, 917, 1051, 1117, 2211, 2452, 2679
FauI	CCCGC	1 cut(s)	71
FauNDI	CATATG	1 cut(s)	228
FblI	GTMKAC	1 cut(s)	385
Fnu4HI	GCNGC	8 cut(s)	107, 789, 850, 1590, 1593, 1608, 1716, 1740
FriOI	GRGCYC	1 cut(s)	2553
Fsp4HI	GCNGC	8 cut(s)	107, 789, 850, 1590, 1593, 1608, 1716, 1740
FspBI	CTAG	7 cut(s)	524, 558, 575, 825, 1034, 1751, 2253
FspI	TGCGCA	1 cut(s)	1611
GlaI	GCGC	2 cut(s)	451, 1611
GluI	GCNGC	8 cut(s)	107, 789, 850, 1590, 1593, 1608, 1716, 1740
HaeIII	GGCC	4 cut(s)	366, 1046, 1870, 2618
HapII	CCGG	4 cut(s)	145, 246, 1571, 2750
HgaI	GACGC	3 cut(s)	841, 1860, 2245
HhaI	GCGC	2 cut(s)	452, 1612
Hin1II	CATG	7 cut(s)	377, 921, 1055, 1121, 2215, 2456, 2683
Hin6I	GCGC	2 cut(s)	450, 1610
HinP1I	GCGC	2 cut(s)	450, 1610
HincII	GTYRAC	2 cut(s)	1162, 2674
HindII	GTYRAC	2 cut(s)	1162, 2674
HindIII	AAGCTT	2 cut(s)	2338, 2370
HpaII	CCGG	4 cut(s)	145, 246, 1571, 2750
Hpy166II	GTNNAC	7 cut(s)	46, 386, 1103, 1162, 2306, 2652, 2674
Hpy8I	GTNNAC	7 cut(s)	46, 386, 1103, 1162, 2306, 2652, 2674
HpyAV	CCTTC	9 cut(s)	460, 743, 853, 893, 899, 1330, 1854, 2054, 2427
HpyCH4III	ACNGT	7 cut(s)	398, 581, 1159, 1347, 1913, 1981, 2295
HpyCH4IV	ACGT	3 cut(s)	119, 2308, 2648
HpyF10VI	GCNNNNNNNGC	6 cut(s)	788, 821, 830, 923, 1358, 1721
HpyF3I	CTNAG	9 cut(s)	664, 756, 1770, 1801, 1986, 1995, 2187, 2552, 2621
HpySE526I	ACGT	3 cut(s)	119, 2308, 2648
Hsp92II	CATG	7 cut(s)	377, 921, 1055, 1121, 2215, 2456, 2683
HspAI	GCGC	2 cut(s)	450, 1610
Kzo9I	GATC	4 cut(s)	484, 961, 1324, 1822
LguI	GCTCTTC	1 cut(s)	2437
LmnI	GCTCC	6 cut(s)	24, 126, 661, 1030, 1723, 2032
Lsp1109I	GCAGC	8 cut(s)	118, 775, 861, 1576, 1579, 1594, 1726, 1727
MaeI	CTAG	7 cut(s)	524, 558, 575, 825, 1034, 1751, 2253
MaeII	ACGT	3 cut(s)	119, 2308, 2648
MalI	GATC	4 cut(s)	486, 963, 1326, 1824
MboI	GATC	4 cut(s)	484, 961, 1324, 1822
MfeI	CAATTG	1 cut(s)	1254
MflI	RGATCY	2 cut(s)	961, 1822
MhlI	GDGCHC	6 cut(s)	131, 396, 1905, 2308, 2449, 2553
MlsI	TGGCCA	1 cut(s)	366
MluNI	TGGCCA	1 cut(s)	366
MlyI	GAGTC	2 cut(s)	1117, 1997
MmeI	TCCRAC	4 cut(s)	867, 2172, 2203, 2714
Mox20I	TGGCCA	1 cut(s)	366
Mph1103I	ATGCAT	1 cut(s)	817
MroXI	GAANNNNTTC	1 cut(s)	1980
MscI	TGGCCA	1 cut(s)	366
MseI	TTAA	6 cut(s)	608, 1383, 1746, 2048, 2271, 2484
MslI	CAYNNNNRTG	1 cut(s)	2244
Msp20I	TGGCCA	1 cut(s)	366
MspI	CCGG	4 cut(s)	145, 246, 1571, 2750
MspR9I	CCNGG	3 cut(s)	726, 1572, 1827
MunI	CAATTG	1 cut(s)	1254
Mva1269I	GAATGC	3 cut(s)	817, 1418, 2152
MvaI	CCWGG	2 cut(s)	726, 1827
MwoI	GCNNNNNNNGC	6 cut(s)	788, 821, 830, 923, 1358, 1721
NciI	CCSGG	1 cut(s)	1572
NdeI	CATATG	1 cut(s)	228
NdeII	GATC	4 cut(s)	484, 961, 1324, 1822
NlaIII	CATG	7 cut(s)	377, 921, 1055, 1121, 2215, 2456, 2683
NlaIV	GGNNCC	5 cut(s)	26, 723, 1081, 1824, 1983
NsbI	TGCGCA	1 cut(s)	1611
NsiI	ATGCAT	1 cut(s)	817
NspI	RCATGY	2 cut(s)	921, 2683
PagI	TCATGA	2 cut(s)	373, 1117
PciI	ACATGT	1 cut(s)	2679
PciSI	GCTCTTC	1 cut(s)	2437
PctI	GAATGC	3 cut(s)	817, 1418, 2152
PdmI	GAANNNNTTC	1 cut(s)	1980
PflMI	CCANNNNNTGG	1 cut(s)	2222
PfoI	TCCNGGA	1 cut(s)	1825
PkrI	GCNGC	8 cut(s)	108, 790, 851, 1591, 1594, 1609, 1717, 1741
PleI	GAGTC	2 cut(s)	1117, 1996
PmaCI	CACGTG	1 cut(s)	2309
PmlI	CACGTG	1 cut(s)	2309
PpsI	GAGTC	2 cut(s)	1117, 1996
Ppu21I	YACGTR	1 cut(s)	2309
PpuMI	RGGWCCY	1 cut(s)	1080
PscI	ACATGT	1 cut(s)	2679
PshBI	ATTAAT	1 cut(s)	1383
PsiI	TTATAA	3 cut(s)	263, 1637, 2009
Psp124BI	GAGCTC	1 cut(s)	2553
Psp5II	RGGWCCY	1 cut(s)	1080
Psp6I	CCWGG	2 cut(s)	724, 1825
PspCI	CACGTG	1 cut(s)	2309
PspGI	CCWGG	2 cut(s)	724, 1825
PspN4I	GGNNCC	5 cut(s)	26, 723, 1081, 1824, 1983
PspPI	GGNCC	6 cut(s)	190, 722, 1080, 1869, 2384, 2617
PspPPI	RGGWCCY	1 cut(s)	1080
PstI	CTGCAG	3 cut(s)	1279, 1627, 1962
PstNI	CAGNNNCTG	2 cut(s)	1721, 2293
PsuI	RGATCY	2 cut(s)	961, 1822
RsaI	GTAC	3 cut(s)	1308, 2319, 2651
RsaNI	GTAC	3 cut(s)	1307, 2318, 2650
RseI	CAYNNNNRTG	1 cut(s)	2244
SacI	GAGCTC	1 cut(s)	2553
SapI	GCTCTTC	1 cut(s)	2437
SaqAI	TTAA	6 cut(s)	608, 1383, 1746, 2048, 2271, 2484
SatI	GCNGC	8 cut(s)	107, 789, 850, 1590, 1593, 1608, 1716, 1740
Sau3AI	GATC	4 cut(s)	484, 961, 1324, 1822
Sau96I	GGNCC	6 cut(s)	190, 722, 1080, 1869, 2384, 2617
SchI	GAGTC	2 cut(s)	1117, 1997
ScrFI	CCNGG	3 cut(s)	726, 1572, 1827
SduI	GDGCHC	6 cut(s)	131, 396, 1905, 2308, 2449, 2553
SfcI	CTRYAG	5 cut(s)	819, 1275, 1623, 1958, 2557
SinI	GGWCC	4 cut(s)	190, 722, 1080, 2384
SmiMI	CAYNNNNRTG	1 cut(s)	2244
SmlI	CTYRAG	4 cut(s)	389, 927, 1165, 1898
SmoI	CTYRAG	4 cut(s)	389, 927, 1165, 1898
SsiI	CCGC	4 cut(s)	78, 179, 193, 681
SspI	AATATT	1 cut(s)	2589
SspMI	CTAG	7 cut(s)	524, 558, 575, 825, 1034, 1751, 2253
SstI	GAGCTC	1 cut(s)	2553
StyD4I	CCNGG	3 cut(s)	724, 1570, 1825
StyI	CCWWGG	3 cut(s)	37, 134, 2604
TaaI	ACNGT	7 cut(s)	398, 581, 1159, 1347, 1913, 1981, 2295
TaiI	ACGT	3 cut(s)	122, 2311, 2651
TaqI	TCGA	5 cut(s)	354, 562, 709, 1788, 1890
TatI	WGTACW	1 cut(s)	1306
Tru1I	TTAA	6 cut(s)	608, 1383, 1746, 2048, 2271, 2484
Tru9I	TTAA	6 cut(s)	608, 1383, 1746, 2048, 2271, 2484
TscAI	CASTG	6 cut(s)	586, 760, 1137, 1352, 1368, 2703
TseI	GCWGC	8 cut(s)	106, 788, 849, 1589, 1592, 1607, 1715, 1739
TspGWI	ACGGA	5 cut(s)	60, 472, 752, 2045, 2558
TspRI	CASTG	6 cut(s)	586, 760, 1137, 1352, 1368, 2703
Van91I	CCANNNNNTGG	1 cut(s)	2222
VneI	GTGCAC	1 cut(s)	2304
VpaK11BI	GGWCC	4 cut(s)	190, 722, 1080, 2384
VspI	ATTAAT	1 cut(s)	1383
XagI	CCTNNNNNAGG	1 cut(s)	2357
XapI	RAATTY	7 cut(s)	155, 322, 378, 500, 604, 1934, 2456
XbaI	TCTAGA	4 cut(s)	523, 574, 1750, 2252
XceI	RCATGY	2 cut(s)	921, 2683
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2611
XmiI	GTMKAC	1 cut(s)	385
XmnI	GAANNNNTTC	1 cut(s)	1980
XspI	CTAG	7 cut(s)	524, 558, 575, 825, 1034, 1751, 2253
Zsp2I	ATGCAT	1 cut(s)	817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.