pycom04g11070

TPL-binding domain in jasmonate signalling

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0009150
Physical Location & Seq
Reverse (-)
13869193 .. 13875118
5926 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2526 bp
ATGGGTGAAGAGGCAATTTGTGTGGGGAAATTGAGAGATGGGGAAGTGGAAACCGAAAACTCCCCGAGAGCTGAATTGAAGCGAGAGCACGAGTGTCTCGGAGATGATAGCGGGGCAGACTCGTTTCCCAACAAGAAGCAAGTGAAGGACCATTCCAATGAGGATATACGTTCGGAAGTATCAAACCCTGTTGTGTCTCCGAAAGAGAATGGCTCCACTTTTCAGGACATTACTAGCCAACCTGCTGAATTGGTAAATAATAACCGAACAGAGTGCGGTGAAGTTGAGTCCTCAAGTTCGGGGAATTCGGGCTCTGAGGAGACCTTGAGCGATGGACAGTGTACTGTGAATGATAATTGCCAAATTGAGAACAAGACGAATGGTGATGTATTGACCTCTCGGGTTGTGGTTGAAATTCCTAAGCTTACCAATTCATCTGGCATTCGCAAGATTACGTTCAAATTCAGCAAGAAAAAGGAGGATTATGACTCTTCACATGGAAATGCTTATCAGGAGTCCGGAATGGACTTTCAGGCAATGGCTAGTACAAGTAGGGAGTTTCCAGCAGGTTCATGTTGGAGGCAGTGCGCTGAATCCGGCAACTTTCATCCTTGTACTTCTAATTGGGAGTTGGAAAGTTCTACTAATGTAGTTCCGAGCAGCTATCCTTCAAATGTTAAAAAGCTATTGTCTACTGGTATTCTTGATGGGGCTCGAGTGAAGTATGTTTCCTCCCCACCAAAGATAGAGCTACATGGAATTATAAGTTGCGGTGGTTATTTGTGCGGCTGCTTATCATGCAATTTCACCAGGGTACTCAGTGCATATGAGTTTGAGCAGCATGCTGGTGTCAAGACTCGGCATCCTAATAATCACATATACATGGAGAATGGGAGGCCAGTTTATAGCATCATACAAGAACTGAAGACTGCTCCACTAAGCAGTCTGGATGAAGTGATAAAGGATATAGCTGGCTCTGCTCTCAACGAAGAGTCCTTTCGGATTTGGAAAGCAACTCTTTATCGTATTGATGGAATGGCTGAAGTGGAGAAAAGACGTCGTGTGAAGCTCCCTAAATTGCCTCATCCAATTCCCAGACCAAGCTTCCACAATCCTTATGAAACTATGAACCAGAAGAAAATCGCTGAAGGTGGCAATAGGAGAAGGGATAATGATCTTCACCGGTTACTATTTATGCCAAATGGACTTCCAGATGGAGCTAAATTGGCATACTATGTCAAAGGGCAGAGATTACTTGGTGGCTATAAGCAAGGAAATGGGATAGTCTGTAATTGCTGTGACAAAGAGATAAGCCCTTCACAGTTTGAAGCTCATGCTGGAATGGCTGCAAGGCGTCAACCTTACCGTCACATCTATACTTCCAATGGATTGACGCTTCATGATATAGCCATGTCATTGGCCAATGGGCAAAACCTGACAATTGGTGGCAGTGATGGAAATGATGATATGTGTGCTGTATGTGGACATGATACAGGGGATTTGATTTTCTGTGATGGATGCCCTCGTGCTTATCATTCAGCTTGTTTGGATTTAGCATTGGTTCCTCAAGGTGATTGGCATTGTCCAGATTGTAGAGATAAGTTTGAACCTGGTAAAAAAGCTGCTGCCGGTGGGGAATCTTCAAATATTGGAAGACCTATTGTAATACGTTTGACACGGGTCTTCAATGCACCTGAGTATGAAATTGGTGGCTGCGTTGTTTGCAGGAGCCAAGATTTCAGTGCAGCTTTATTTGATGAACGAACGGTTATAATCTGTGACCAGTGTGAGAAGGAATTCCATGTTGGTTGCTTACGGGACAGTGGATTATGTGACTTAAAAGAACTCCCCAAAGATAAATGGTTTTGTTGTGATGACTGTAATAGGATTCATGCAGCTTTACAGAATTTAGTATTCAATGGAGCAGAGAGTGTTCTCGCTCCATTATCAGATACAATAATCCGGAAGCATGCAGATAGAGGTTTGTTTATTGACGGAGTGGCAGATGTTCAATGGCGAGTTTTCAGTGGAAAGAGTCGCTATCCGGAACACCTACCCTTTCTTTCAAGGGCTGCTGCTATTTTTCGAGAGTGCTTTGACCCTATTGTTGCACAGTCTGGTCGTGACTTGATCCCTGTTATGGTATATGGGAGAAATATTTCAGGTCAAGAGTTTGGAGGCATGTACTGTGTTGTTTTGATAGTGGGATCTGTTGTTGTATCTGCTGGTCTCCTTAGGGTTTTTGGTCGGGAGGTTGCTGAGCTTCCGATCGTTGCTACTAGTAGAGAACATCAAGGAAAAGGTTACTTCCAAGCACTATTTTCATGTATAGAGAGGTTACTTATTTCCCTGAAAGTGGAAAAACTGGTTCTCCCCGCGGCTGAGGAAGCCGAGTCAATCTGGACGAGGAAGTTAGGATTTAGAAAGATGAAAGATGAGCAATTATCGAAATACATGAGAGATGTGCAGTTGACAATTTTCCGAGGGACGTCAATGCTAGAGAAGGCAGTGAAGTTGACGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas PHD

Protein Analysis

842

Amino Acids

93.04

Weight (kDa)

6.17

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 253 - 307 6.7e-13 Tify domain binding domain
TDBD PF16135 424 - 469 1.4e-13 Tify domain binding domain
PHD-1st_NSD PF23011 488 - 532 3e-06 Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PHD PF00628 491 - 531 4.7e-08 PHD-finger
IDM1_C PF23209 699 - 835 2.5e-51 Increased DNA methylation 1, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 764, 1772
AatII GACGTC 2 cut(s) 1060, 2492
Acc36I ACCTGC 2 cut(s) 250, 557
AccI GTMKAC 1 cut(s) 692
AccII CGCG 1 cut(s) 2378
AccIII TCCGGA 3 cut(s) 518, 1962, 2044
AciI CCGC 6 cut(s) 111, 276, 771, 786, 2376, 2378
AclWI GGATC 2 cut(s) 2125, 2215
AcoI YGGCCR 1 cut(s) 1419
AcsI RAATTY 5 cut(s) 304, 414, 461, 1796, 1906
AcuI CTGAAG 3 cut(s) 944, 1062, 1167
AcyI GRCGYC 3 cut(s) 1057, 1354, 2489
AfaI GTAC 5 cut(s) 343, 547, 616, 816, 2186
AfiI CCNNNNNNNGG 2 cut(s) 2140, 2356
AgeI ACCGGT 1 cut(s) 1182
AhlI ACTAGT 1 cut(s) 2279
AjnI CCWGG 2 cut(s) 809, 1609
AjuI GAANNNNNNNTTGG 2 cut(s) 1788, 1820
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 4 cut(s) 101, 201, 314, 2234
AlwI GGATC 2 cut(s) 2125, 2215
Ama87I CYCGRG 3 cut(s) 64, 399, 714
Aor13HI TCCGGA 3 cut(s) 518, 1962, 2044
AoxI GGCC 2 cut(s) 896, 1419
ApoI RAATTY 5 cut(s) 304, 414, 461, 1796, 1906
AsiGI ACCGGT 1 cut(s) 1182
Asp700I GAANNNNTTC 2 cut(s) 1796, 2158
AspLEI GCGC 1 cut(s) 590
AspS9I GGNCC 1 cut(s) 148
AsuHPI GGTGA 6 cut(s) 17, 290, 395, 799, 1172, 1583
AvaI CYCGRG 3 cut(s) 64, 399, 714
AvaII GGWCC 1 cut(s) 148
AxyI CCTNAGG 1 cut(s) 2234
BalI TGGCCA 1 cut(s) 1421
BanII GRGCYC 2 cut(s) 314, 715
BauI CACGAG 2 cut(s) 89, 1524
BbsI GAAGAC 3 cut(s) 932, 1660, 1675
Bbv12I GWGCWC 1 cut(s) 90
BbvCI CCTCAGC 1 cut(s) 2382
BccI CCATC 7 cut(s) 32, 326, 701, 1025, 1208, 1448, 1508
BcgI CGANNNNNNTGC 2 cut(s) 255, 289
BciT130I CCWGG 2 cut(s) 811, 1611
BcoDI GTCTC 4 cut(s) 101, 201, 314, 2234
BcuI ACTAGT 1 cut(s) 2279
BfaI CTAG 4 cut(s) 234, 543, 2280, 2498
BfuAI ACCTGC 2 cut(s) 250, 557
BlpI GCTNAGC 1 cut(s) 2259
Bme1390I CCNGG 2 cut(s) 811, 1611
Bme18I GGWCC 1 cut(s) 148
BmeT110I CYCGRG 3 cut(s) 64, 399, 714
BmgT120I GGNCC 1 cut(s) 148
BmiI GGNNCC 3 cut(s) 214, 1563, 1730
BmrFI CCNGG 2 cut(s) 811, 1611
BmsI GCATC 3 cut(s) 871, 918, 1508
BoxI GACNNNNGTC 1 cut(s) 1679
BpiI GAAGAC 3 cut(s) 932, 1660, 1675
BplI GAGNNNNNCTC 2 cut(s) 197, 229
Bpu10I CCTNAGC 2 cut(s) 420, 2382
Bpu1102I GCTNAGC 1 cut(s) 2259
BpuEI CTTGAG 3 cut(s) 277, 346, 1551
BsaBI GATNNNNATC 1 cut(s) 1173
BsaHI GRCGYC 3 cut(s) 1057, 1354, 2489
BsaI GGTCTC 2 cut(s) 314, 2234
BsaJI CCNNGG 3 cut(s) 810, 2376, 2482
BsaWI WCCGGW 4 cut(s) 518, 1182, 1962, 2044
BsaXI ACNNNNNCTCC 2 cut(s) 2355, 2385
Bsc4I CCNNNNNNNGG 2 cut(s) 2140, 2356
Bse118I RCCGGY 2 cut(s) 1182, 1628
Bse1I ACTGG 4 cut(s) 700, 899, 1783, 2370
Bse21I CCTNAGG 1 cut(s) 2234
Bse3DI GCAATG 1 cut(s) 543
Bse8I GATNNNNATC 1 cut(s) 1173
BseAI TCCGGA 3 cut(s) 518, 1962, 2044
BseBI CCWGG 2 cut(s) 811, 1611
BseDI CCNNGG 3 cut(s) 810, 2376, 2482
BseGI GGATG 5 cut(s) 607, 862, 955, 1084, 1523
BseJI GATNNNNATC 1 cut(s) 1173
BseLI CCNNNNNNNGG 2 cut(s) 2140, 2356
BseMI GCAATG 1 cut(s) 543
BseMII CTCAG 5 cut(s) 306, 832, 1686, 2250, 2373
BseNI ACTGG 4 cut(s) 700, 899, 1783, 2370
BseRI GAGGAG 1 cut(s) 332
BsgI GTGCAG 2 cut(s) 1764, 2486
Bsh1236I CGCG 1 cut(s) 2378
Bsh1285I CGRYCG 1 cut(s) 2271
BshFI GGCC 2 cut(s) 898, 1421
BshTI ACCGGT 1 cut(s) 1182
BsiEI CGRYCG 1 cut(s) 2271
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 3 cut(s) 64, 399, 714
BsiSI CCGG 6 cut(s) 519, 597, 1183, 1629, 1963, 2045
BslFI GGGAC 2 cut(s) 1832, 2500
BslI CCNNNNNNNGG 2 cut(s) 2140, 2356
BsmAI GTCTC 4 cut(s) 101, 201, 314, 2234
BsmFI GGGAC 2 cut(s) 1832, 2500
BsmI GAATGC 1 cut(s) 441
BsnI GGCC 2 cut(s) 898, 1421
Bso31I GGTCTC 2 cut(s) 314, 2234
BsoBI CYCGRG 3 cut(s) 64, 399, 714
Bsp1286I GDGCHC 3 cut(s) 90, 314, 715
Bsp13I TCCGGA 3 cut(s) 518, 1962, 2044
Bsp143I GATC 4 cut(s) 1174, 2130, 2207, 2268
Bsp1720I GCTNAGC 1 cut(s) 2259
BspACI CCGC 6 cut(s) 111, 276, 771, 786, 2376, 2378
BspANI GGCC 2 cut(s) 898, 1421
BspCNI CTCAG 5 cut(s) 307, 831, 1687, 2251, 2374
BspEI TCCGGA 3 cut(s) 518, 1962, 2044
BspFNI CGCG 1 cut(s) 2378
BspHI TCATGA 1 cut(s) 1399
BspLI GGNNCC 3 cut(s) 214, 1563, 1730
BspMI ACCTGC 2 cut(s) 250, 557
BspPI GGATC 2 cut(s) 2125, 2215
BspTNI GGTCTC 2 cut(s) 314, 2234
BsrDI GCAATG 1 cut(s) 543
BsrFI RCCGGY 2 cut(s) 1182, 1628
BsrI ACTGG 4 cut(s) 700, 899, 1783, 2370
BssAI RCCGGY 2 cut(s) 1182, 1628
BssECI CCNNGG 3 cut(s) 810, 2376, 2482
BssMI GATC 4 cut(s) 1174, 2130, 2207, 2268
BssNI GRCGYC 3 cut(s) 1057, 1354, 2489
BssSI CACGAG 2 cut(s) 89, 1524
Bst2BI CACGAG 2 cut(s) 89, 1524
Bst2UI CCWGG 2 cut(s) 811, 1611
Bst4CI ACNGT 9 cut(s) 339, 346, 1323, 1367, 1768, 1823, 1880, 2115, 2189
Bst6I CTCTTC 3 cut(s) 3, 496, 984
BstACI GRCGYC 3 cut(s) 1057, 1354, 2489
BstC8I GCNNGC 3 cut(s) 843, 973, 1971
BstDEI CTNAG 8 cut(s) 315, 420, 818, 938, 1695, 2234, 2259, 2382
BstDSI CCRYGG 1 cut(s) 2376
BstF5I GGATG 5 cut(s) 607, 862, 955, 1084, 1523
BstFNI CGCG 1 cut(s) 2378
BstHHI GCGC 1 cut(s) 590
BstKTI GATC 4 cut(s) 1177, 2133, 2210, 2271
BstMAI GTCTC 4 cut(s) 101, 201, 314, 2234
BstMBI GATC 4 cut(s) 1174, 2130, 2207, 2268
BstMCI CGRYCG 1 cut(s) 2271
BstMWI GCNNNNNNNGC 6 cut(s) 798, 977, 1226, 1343, 1722, 2387
BstNI CCWGG 2 cut(s) 811, 1611
BstNSI RCATGY 3 cut(s) 845, 1973, 2185
BstPAI GACNNNNGTC 1 cut(s) 1679
BstSCI CCNGG 2 cut(s) 809, 1609
BstUI CGCG 1 cut(s) 2378
BstV2I GAAGAC 3 cut(s) 932, 1660, 1675
BstX2I RGATCY 1 cut(s) 2207
BstXI CCANNNNNNTGG 1 cut(s) 1417
BstYI RGATCY 1 cut(s) 2207
Bsu36I CCTNAGG 1 cut(s) 2234
BsuRI GGCC 2 cut(s) 898, 1421
BtgI CCRYGG 1 cut(s) 2376
BtgZI GCGATG 1 cut(s) 345
BtsCI GGATG 5 cut(s) 607, 862, 955, 1084, 1523
BtsI GCAGTG 3 cut(s) 590, 1456, 2514
BtsIMutI CAGTG 9 cut(s) 344, 590, 826, 1456, 1747, 1790, 1828, 2032, 2514
BveI ACCTGC 2 cut(s) 250, 557
Cac8I GCNNGC 3 cut(s) 843, 973, 1971
CciI TCATGA 1 cut(s) 1399
CfoI GCGC 1 cut(s) 590
Cfr10I RCCGGY 2 cut(s) 1182, 1628
Cfr13I GGNCC 1 cut(s) 148
Cfr42I CCGCGG 1 cut(s) 2379
CseI GACGC 2 cut(s) 1343, 1402
CsiI ACCWGGT 1 cut(s) 1609
Csp6I GTAC 5 cut(s) 342, 546, 615, 815, 2185
CspAI ACCGGT 1 cut(s) 1182
CspCI CAANNNNNGTGG 1 cut(s) 38
CviQI GTAC 5 cut(s) 342, 546, 615, 815, 2185
DdeI CTNAG 8 cut(s) 315, 420, 818, 938, 1695, 2234, 2259, 2382
DpnI GATC 4 cut(s) 1176, 2132, 2209, 2270
DpnII GATC 4 cut(s) 1174, 2130, 2207, 2268
EaeI YGGCCR 1 cut(s) 1419
Eam1104I CTCTTC 3 cut(s) 3, 496, 984
EarI CTCTTC 3 cut(s) 3, 496, 984
Eco24I GRGCYC 2 cut(s) 314, 715
Eco31I GGTCTC 2 cut(s) 314, 2234
Eco47I GGWCC 1 cut(s) 148
Eco57I CTGAAG 3 cut(s) 944, 1062, 1167
Eco81I CCTNAGG 1 cut(s) 2234
Eco88I CYCGRG 3 cut(s) 64, 399, 714
EcoRI GAATTC 2 cut(s) 304, 1796
EcoRII CCWGG 2 cut(s) 809, 1609
EcoT38I GRGCYC 2 cut(s) 314, 715
FalI AAGNNNNNCTT 2 cut(s) 1002, 1034
FaqI GGGAC 2 cut(s) 1832, 2500
FauI CCCGC 2 cut(s) 104, 2383
FauNDI CATATG 1 cut(s) 826
FblI GTMKAC 1 cut(s) 692
FokI GGATG 5 cut(s) 594, 849, 962, 1071, 1530
FriOI GRGCYC 2 cut(s) 314, 715
FspBI CTAG 4 cut(s) 234, 543, 2280, 2498
GlaI GCGC 1 cut(s) 589
HaeIII GGCC 2 cut(s) 898, 1421
HapII CCGG 6 cut(s) 519, 597, 1183, 1629, 1963, 2045
HgaI GACGC 2 cut(s) 1343, 1402
HhaI GCGC 1 cut(s) 590
Hin1I GRCGYC 3 cut(s) 1057, 1354, 2489
Hin6I GCGC 1 cut(s) 588
HinP1I GCGC 1 cut(s) 588
HincII GTYRAC 3 cut(s) 1358, 2472, 2517
HindII GTYRAC 3 cut(s) 1358, 2472, 2517
HindIII AAGCTT 2 cut(s) 422, 1102
HpaII CCGG 6 cut(s) 519, 597, 1183, 1629, 1963, 2045
HphI GGTGA 6 cut(s) 17, 290, 395, 799, 1172, 1583
Hpy166II GTNNAC 6 cut(s) 342, 693, 1358, 1484, 2472, 2517
Hpy188I TCNGA 9 cut(s) 101, 175, 201, 316, 657, 1002, 1951, 2268, 2483
Hpy8I GTNNAC 6 cut(s) 342, 693, 1358, 1484, 2472, 2517
Hpy99I CGWCG 1 cut(s) 1062
HpyAV CCTTC 7 cut(s) 139, 678, 1142, 1158, 1326, 1786, 2497
HpyCH4III ACNGT 9 cut(s) 339, 346, 1323, 1367, 1768, 1823, 1880, 2115, 2189
HpyCH4IV ACGT 5 cut(s) 169, 455, 1057, 1669, 2489
HpyF10VI GCNNNNNNNGC 6 cut(s) 798, 977, 1226, 1343, 1722, 2387
HpyF3I CTNAG 8 cut(s) 315, 420, 818, 938, 1695, 2234, 2259, 2382
HpySE526I ACGT 5 cut(s) 169, 455, 1057, 1669, 2489
Hsp92I GRCGYC 3 cut(s) 1057, 1354, 2489
HspAI GCGC 1 cut(s) 588
Kpn2I TCCGGA 3 cut(s) 518, 1962, 2044
KspI CCGCGG 1 cut(s) 2379
Kzo9I GATC 4 cut(s) 1174, 2130, 2207, 2268
LmnI GCTCC 7 cut(s) 218, 937, 1074, 1217, 1728, 1922, 1945
LweI GCATC 3 cut(s) 871, 918, 1508
MabI ACCWGGT 1 cut(s) 1609
MaeI CTAG 4 cut(s) 234, 543, 2280, 2498
MaeII ACGT 5 cut(s) 169, 455, 1057, 1669, 2489
MaeIII GTNAC 8 cut(s) 1185, 1298, 1367, 1778, 1832, 2123, 2303, 2337
MalI GATC 4 cut(s) 1176, 2132, 2209, 2270
MboI GATC 4 cut(s) 1174, 2130, 2207, 2268
MboII GAAGA 9 cut(s) 20, 483, 937, 1001, 1147, 1169, 1632, 1665, 1675
MfeI CAATTG 1 cut(s) 1440
MflI RGATCY 1 cut(s) 2207
MhlI GDGCHC 3 cut(s) 90, 314, 715
MlsI TGGCCA 1 cut(s) 1421
MluNI TGGCCA 1 cut(s) 1421
MlyI GAGTC 8 cut(s) 113, 296, 482, 524, 850, 1001, 2044, 2402
MmeI TCCRAC 2 cut(s) 557, 612
Mox20I TGGCCA 1 cut(s) 1421
MroI TCCGGA 3 cut(s) 518, 1962, 2044
MroXI GAANNNNTTC 2 cut(s) 1796, 2158
MscI TGGCCA 1 cut(s) 1421
MseI TTAA 2 cut(s) 678, 1838
MslI CAYNNNNRTG 4 cut(s) 156, 501, 846, 881
Msp20I TGGCCA 1 cut(s) 1421
MspA1I CMGCKG 1 cut(s) 2378
MspI CCGG 6 cut(s) 519, 597, 1183, 1629, 1963, 2045
MspR9I CCNGG 2 cut(s) 811, 1611
MunI CAATTG 1 cut(s) 1440
Mva1269I GAATGC 1 cut(s) 441
MvaI CCWGG 2 cut(s) 811, 1611
MvnI CGCG 1 cut(s) 2378
MwoI GCNNNNNNNGC 6 cut(s) 798, 977, 1226, 1343, 1722, 2387
NdeI CATATG 1 cut(s) 826
NdeII GATC 4 cut(s) 1174, 2130, 2207, 2268
NlaIV GGNNCC 3 cut(s) 214, 1563, 1730
NmeAIII GCCGAG 2 cut(s) 838, 2416
NmuCI GTSAC 5 cut(s) 1298, 1367, 1778, 1832, 2123
NspI RCATGY 3 cut(s) 845, 1973, 2185
PaeI GCATGC 2 cut(s) 845, 1973
PaeR7I CTCGAG 1 cut(s) 714
PagI TCATGA 1 cut(s) 1399
PctI GAATGC 1 cut(s) 441
PdmI GAANNNNTTC 2 cut(s) 1796, 2158
PfeI GAWTC 3 cut(s) 593, 1637, 1888
PinAI ACCGGT 1 cut(s) 1182
Ple19I CGATCG 1 cut(s) 2271
PleI GAGTC 8 cut(s) 113, 295, 482, 523, 850, 1000, 2043, 2401
PpsI GAGTC 8 cut(s) 113, 295, 482, 523, 850, 1000, 2043, 2401
PshAI GACNNNNGTC 1 cut(s) 1679
PsiI TTATAA 2 cut(s) 764, 1772
Psp6I CCWGG 2 cut(s) 809, 1609
PspGI CCWGG 2 cut(s) 809, 1609
PspN4I GGNNCC 3 cut(s) 214, 1563, 1730
PspPI GGNCC 1 cut(s) 148
PspXI VCTCGAGB 1 cut(s) 714
PsuI RGATCY 1 cut(s) 2207
PvuI CGATCG 1 cut(s) 2271
RsaI GTAC 5 cut(s) 343, 547, 616, 816, 2186
RsaNI GTAC 5 cut(s) 342, 546, 615, 815, 2185
RseI CAYNNNNRTG 4 cut(s) 156, 501, 846, 881
SacII CCGCGG 1 cut(s) 2379
SaqAI TTAA 2 cut(s) 678, 1838
Sau3AI GATC 4 cut(s) 1174, 2130, 2207, 2268
Sau96I GGNCC 1 cut(s) 148
SchI GAGTC 8 cut(s) 113, 296, 482, 524, 850, 1001, 2044, 2402
ScrFI CCNGG 2 cut(s) 811, 1611
SduI GDGCHC 3 cut(s) 90, 314, 715
SexAI ACCWGGT 1 cut(s) 1609
SfaNI GCATC 3 cut(s) 871, 918, 1508
Sfr274I CTCGAG 1 cut(s) 714
Sfr303I CCGCGG 1 cut(s) 2379
SgrBI CCGCGG 1 cut(s) 2379
SinI GGWCC 1 cut(s) 148
SlaI CTCGAG 1 cut(s) 714
SmiMI CAYNNNNRTG 4 cut(s) 156, 501, 846, 881
SmlI CTYRAG 4 cut(s) 292, 325, 714, 1566
SmoI CTYRAG 4 cut(s) 292, 325, 714, 1566
SpeI ACTAGT 1 cut(s) 2279
SphI GCATGC 2 cut(s) 845, 1973
SsiI CCGC 6 cut(s) 111, 276, 771, 786, 2376, 2378
SspI AATATT 2 cut(s) 1648, 2158
SspMI CTAG 4 cut(s) 234, 543, 2280, 2498
StyD4I CCNGG 2 cut(s) 809, 1609
TaaI ACNGT 9 cut(s) 339, 346, 1323, 1367, 1768, 1823, 1880, 2115, 2189
TaiI ACGT 5 cut(s) 172, 458, 1060, 1672, 2492
TaqI TCGA 3 cut(s) 715, 2086, 2447
TatI WGTACW 4 cut(s) 341, 545, 614, 2184
TauI GCSGC 2 cut(s) 789, 2381
TfiI GAWTC 3 cut(s) 593, 1637, 1888
Tru1I TTAA 2 cut(s) 678, 1838
Tru9I TTAA 2 cut(s) 678, 1838
TscAI CASTG 9 cut(s) 344, 590, 826, 1456, 1747, 1790, 1828, 2032, 2514
TseFI GTSAC 5 cut(s) 1298, 1367, 1778, 1832, 2123
Tsp45I GTSAC 5 cut(s) 1298, 1367, 1778, 1832, 2123
TspGWI ACGGA 1 cut(s) 2010
TspRI CASTG 9 cut(s) 344, 590, 826, 1456, 1747, 1790, 1828, 2032, 2514
VpaK11BI GGWCC 1 cut(s) 148
XapI RAATTY 5 cut(s) 304, 414, 461, 1796, 1906
XceI RCATGY 3 cut(s) 845, 1973, 2185
XhoI CTCGAG 1 cut(s) 714
XmiI GTMKAC 1 cut(s) 692
XmnI GAANNNNTTC 2 cut(s) 1796, 2158
XspI CTAG 4 cut(s) 234, 543, 2280, 2498
ZraI GACGTC 2 cut(s) 1058, 2490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.