Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0012100

Physical Location & Seq

Genomic Coordinates Forward (+)

15810552 .. 15816117

Gene Structure 5566 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGCTGTTGAAGAAGGTGTCGAGCAGGTAGTCGCGCCGCCGCAGAAGGCGAAGGAGCCTTCCGAAGATGAGAAGCGGAGGAAGAAGATAGCGGCCGGAGGTTTGATGAAAGCGGTGATGAGGCCCGGTGGAGGCGATTCGACACCTTCAGATGGTTATCAGGTTGTATATCATTCCACTGTTAGAACATTGGACGGAGTCATTGTTGAATCGTCCCGATCGGAATATGGAGGCAAGGGCACTCCTATACGACATGTTTTGGGGAAGAGCAAGATCATAGTGGGATTACTCGAAGGAATTCCAACAATGCTGAAGGGTGAAGTTGCGATGTTCAAAATGAAACCTCAAGTGCACTATGGTGAGGACGACTGCCCTGTTTCAGCACCCAGCGGCTTTCCCAAGGATGATGAACTTCATTTTGAAATTGAGATGATCGATTTCTTTAAAGCCAAGGTCATTAGTGATGACTTGGGAGTGGTAAAGAAGGTAATAACTGAAGGTCAGGGTTGGGAATCGCCAAGGGAACCTTATGAAGTAAAAGCCTGGATTTCAGCAAAGACAGGTGATGGAAAAGTGCTTGTTTCACATACTCAAGGAGAGCCATTTTTCTTTAATTTTGGAAAGTCAGAGGTACCTAAAGGTCTTGAGATGGGAATTGGTACAATGACACGGAAAGAGAAGGCAATAATATATGTGACCAAGCAGTACTTAACTCCATCTCCTTTCCTTCCTGTGGTAGAAGGTGTTGAGGAAGTTCATTTTGAAGTGGAGCTTGCCCACTTTATTCAGGTGCGCGACATGCTTGGTGATGGGCGCCTGATAAAACGTCGTATTCATGATGGAAAAGGTGAGTTTCCTATGGATTGCCCTCTTCATGACAGCCTACTACGTGTCCATTATAAGGGTATGCTTCTTAACGAGGAAAAGACAATCTTCTATGATACAAGAGTTGATAACGATGGTCAACCTTTGGAGTTTTGTTCTGGAGAAGGCCTTGTGCCCGAGGGATTTGAAATGTGTGTTCGTTTGATGCTGCCTGAAGAGAGAGCTCTCGTCACATGTCCTCCTGATTATGCATACGACAAATTTCCTAGGCCTGCTAATGTTCCTGAAGGTGCTCATATTCAATGGGAAATTGAGCTTCTTGGGTTTGAGATGCCAAAGGATTGGACTGGTTTAAATTTTCAAAGCATAATGGATGAAGCAGAGAAGATTAGAAACACGGGGAACAGGCTATTCAAAGAAGGAAAATTTGAACTTGCTAAGGCAAAGTATGACAAGGTGCTTCGGGAATTTAATCATGTTAATCCACAAGATGATGAAGAGGGGAAAATATTTGCCAATACAAGGAATCTGTTACATCTGAATGTCGCCGCATGCTTCCTGAAGATGGGAGAATGCAGAAAATCCATCGAGACATGCAACAAGGTTTTAGAAGCAAACCCTGGACACGTCAAGGCTCTTTACCGTCGAGGTATGGCCTACATGACTCTTGGAGATTTCGAGGAAGCAAAGAGTGACTTCAACAAGATGATCGATCTAGACAAGTCAACTGAACCTGATGCTACAGCTGCTCTTCAAAAAGTTAAGCAGAAAGAACAGGAAGTTGAGAAGAAGGTGCGGAAGCAATTCAAGGGGCTATTTGACAAGAAGCCAGGGGAAATTGCAGAGGCTGGAACTGAAGATGGAGATCAGCCTGCAGTTGAGAACCCCAAGAATGATGATAAGGAGGATTCCGACGGAGATAATTCAGACGAATCTCATGAAACTGCAGAGGATGTACCTAGATCGTCCTGGTTGTCTTTTTTGTGGCCTAAACGACTACTTGCAGCTCTTGGGCGGCCAGGATGTACGATTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000038 GO:0000413 GO:0000902 GO:0003006 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0006082 GO:0006457 GO:0006464 GO:0006629 GO:0006631 GO:0006633 GO:0006807 GO:0007163 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009880 GO:0009987 GO:0010033 GO:0010154 GO:0012505 GO:0016043 GO:0016049 GO:0016053 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0019752 GO:0022414 GO:0022622 GO:0030010 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042761 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0048316 GO:0048364 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0061077 GO:0061458 GO:0071704 GO:0071840 GO:0072330 GO:0090696 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_6 TPR_8

Protein Analysis

621

Amino Acids

69.53

Weight (kDa)

5.36

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	46 - 144	9.5e-15	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	171 - 258	2.7e-07	FKBP-type peptidyl-prolyl cis-trans isomerase
FKBP_C	PF00254	294 - 382	5.1e-15	FKBP-type peptidyl-prolyl cis-trans isomerase
TPR_1	PF00515	485 - 516	3.3e-07	Tetratricopeptide repeat
TPR_2	PF07719	486 - 516	3.3e-06	Tetratricopeptide repeat
TPR_8	PF13181	486 - 517	1.9e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0012100)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54010 AT3G54010
fragaria_vesca	FvH4_6g12640 FvH4_6g12640 FvH4_6g12640
malus_domestica	MD04G1140300.v1.1 MD12G1155600.v1.1
prunus_persica	Prupe.6G265400_v2.0.a1
pyrus_communis	pycom04g12790 pycom12g14770
rosa_chinensis	RchiOBHm_Chr3g0464491
rosa_laevigata	RLG00000024692
rosa_multiflora	Rmu_sc0003074.1_g000006
rosa_roxburghii	Rroxscaffold_6G00415620
rosa_rugosa	Rorug03G0072600
rosa_samantha	Rh3BG134800 Rh3CG137300 Rh3DG136100
rosa_wichuraiana	Rw3G011020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	900
Acc36I	ACCTGC	1 cut(s)	16
Acc65I	GGTACC	1 cut(s)	631
AccB1I	GGYRCC	2 cut(s)	631, 813
AccII	CGCG	2 cut(s)	35, 795
AciI	CCGC	9 cut(s)	38, 41, 76, 92, 113, 390, 1374, 1621, 1840
AcoI	YGGCCR	2 cut(s)	93, 1841
AcsI	RAATTY	5 cut(s)	297, 1085, 1180, 1250, 1292
AcuI	CTGAAG	7 cut(s)	132, 332, 516, 1059, 1131, 1406, 1701
AcyI	GRCGYC	1 cut(s)	814
AfaI	GTAC	5 cut(s)	633, 661, 707, 1782, 1852
AfiI	CCNNNNNNNGG	6 cut(s)	131, 152, 733, 901, 1347, 1390
AflIII	ACRYGT	4 cut(s)	253, 889, 1058, 1450
AjiI	CACGTC	1 cut(s)	1453
AjnI	CCWGG	5 cut(s)	542, 1444, 1654, 1793, 1843
AleI	CACNNNNGTG	1 cut(s)	357
AluBI	AGCT	5 cut(s)	772, 1049, 1141, 1571, 1832
AluI	AGCT	5 cut(s)	772, 1049, 1141, 1571, 1832
Alw21I	GWGCWC	3 cut(s)	354, 1051, 1120
Alw26I	GTCTC	1 cut(s)	1409
Alw44I	GTGCAC	1 cut(s)	350
AlwNI	CAGNNNCTG	1 cut(s)	1673
Ama87I	CYCGRG	1 cut(s)	1001
AoxI	GGCC	7 cut(s)	93, 122, 991, 1094, 1479, 1811, 1841
ApaLI	GTGCAC	1 cut(s)	350
ApeKI	GCWGC	3 cut(s)	1033, 1571, 1829
ApoI	RAATTY	5 cut(s)	297, 1085, 1180, 1250, 1292
Asp700I	GAANNNNTTC	2 cut(s)	297, 1628
Asp718I	GGTACC	1 cut(s)	631
AspA2I	CCTAGG	1 cut(s)	1091
AspLEI	GCGC	3 cut(s)	37, 795, 816
AspS9I	GGNCC	1 cut(s)	123
AsuC2I	CCSGG	1 cut(s)	126
AsuHPI	GGTGA	6 cut(s)	127, 329, 371, 575, 818, 860
AvaI	CYCGRG	1 cut(s)	1001
AvrII	CCTAGG	1 cut(s)	1091
BaeGI	GKGCMC	3 cut(s)	242, 354, 1002
BaeI	ACNNNNGTAYC	2 cut(s)	933, 966
BanI	GGYRCC	2 cut(s)	631, 813
BanII	GRGCYC	1 cut(s)	1051
Bbv12I	GWGCWC	3 cut(s)	354, 1051, 1120
BbvI	GCAGC	3 cut(s)	1020, 1558, 1841
BciT130I	CCWGG	5 cut(s)	544, 1446, 1656, 1795, 1845
BcnI	CCSGG	1 cut(s)	126
BcoDI	GTCTC	1 cut(s)	1409
BfaI	CTAG	3 cut(s)	1092, 1541, 1785
BfmI	CTRYAG	3 cut(s)	1566, 1698, 1770
BfoI	RGCGCY	1 cut(s)	817
BfuAI	ACCTGC	1 cut(s)	16
BisI	GCNGC	9 cut(s)	38, 41, 93, 391, 1034, 1374, 1572, 1830, 1841
BlnI	CCTAGG	1 cut(s)	1091
BlsI	GCNGC	9 cut(s)	39, 42, 94, 392, 1035, 1375, 1573, 1831, 1842
BmcAI	AGTACT	1 cut(s)	707
Bme1390I	CCNGG	6 cut(s)	126, 544, 1446, 1656, 1795, 1845
BmeT110I	CYCGRG	1 cut(s)	1001
BmgBI	CACGTC	1 cut(s)	1453
BmgT120I	GGNCC	1 cut(s)	123
BmiI	GGNNCC	4 cut(s)	57, 525, 633, 815
BmrFI	CCNGG	6 cut(s)	126, 544, 1446, 1656, 1795, 1845
BmsI	GCATC	3 cut(s)	1020, 1146, 1552
BpmI	CTGGAG	1 cut(s)	1005
Bpu10I	CCTNAGC	1 cut(s)	1263
BpuEI	CTTGAG	3 cut(s)	330, 576, 665
BpuMI	CCSGG	1 cut(s)	126
Bsa29I	ATCGAT	2 cut(s)	435, 1536
BsaAI	YACGTR	1 cut(s)	890
BsaBI	GATNNNNATC	2 cut(s)	156, 1689
BsaHI	GRCGYC	1 cut(s)	814
BsaJI	CCNNGG	7 cut(s)	399, 450, 518, 1002, 1091, 1444, 1655
BsaXI	ACNNNNNCTCC	6 cut(s)	189, 219, 703, 733, 1048, 1078
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 152, 733, 901, 1347, 1390
Bse1I	ACTGG	1 cut(s)	1177
Bse8I	GATNNNNATC	2 cut(s)	156, 1689
BseBI	CCWGG	5 cut(s)	544, 1446, 1656, 1795, 1845
BseCI	ATCGAT	2 cut(s)	435, 1536
BseDI	CCNNGG	7 cut(s)	399, 450, 518, 1002, 1091, 1444, 1655
BseGI	GGATG	4 cut(s)	409, 1204, 1783, 1853
BseJI	GATNNNNATC	2 cut(s)	156, 1689
BseLI	CCNNNNNNNGG	6 cut(s)	131, 152, 733, 901, 1347, 1390
BseNI	ACTGG	1 cut(s)	1177
BseSI	GKGCMC	3 cut(s)	242, 354, 1002
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	3 cut(s)	1020, 1558, 1841
BseYI	CCCAGC	1 cut(s)	386
Bsh1236I	CGCG	2 cut(s)	35, 795
Bsh1285I	CGRYCG	2 cut(s)	96, 221
BshFI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BshNI	GGYRCC	2 cut(s)	631, 813
BshVI	ATCGAT	2 cut(s)	435, 1536
BsiEI	CGRYCG	2 cut(s)	96, 221
BsiHKAI	GWGCWC	3 cut(s)	354, 1051, 1120
BsiHKCI	CYCGRG	1 cut(s)	1001
BsiSI	CCGG	2 cut(s)	96, 126
BslFI	GGGAC	1 cut(s)	199
BslI	CCNNNNNNNGG	6 cut(s)	131, 152, 733, 901, 1347, 1390
BsmAI	GTCTC	1 cut(s)	1409
BsmFI	GGGAC	1 cut(s)	199
BsmI	GAATGC	1 cut(s)	1403
BsnI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BsoBI	CYCGRG	1 cut(s)	1001
Bsp1286I	GDGCHC	5 cut(s)	242, 354, 1002, 1051, 1120
Bsp143I	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
BspACI	CCGC	9 cut(s)	38, 41, 76, 92, 113, 390, 1374, 1621, 1840
BspANI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BspDI	ATCGAT	2 cut(s)	435, 1536
BspFNI	CGCG	2 cut(s)	35, 795
BspHI	TCATGA	3 cut(s)	835, 874, 1762
BspLI	GGNNCC	4 cut(s)	57, 525, 633, 815
BspMAI	CTGCAG	2 cut(s)	1702, 1774
BspMI	ACCTGC	1 cut(s)	16
BspQI	GCTCTTC	2 cut(s)	260, 1581
BspT107I	GGYRCC	2 cut(s)	631, 813
BsrI	ACTGG	1 cut(s)	1177
BssECI	CCNNGG	7 cut(s)	399, 450, 518, 1002, 1091, 1444, 1655
BssMI	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
BssNI	GRCGYC	1 cut(s)	814
BssT1I	CCWWGG	4 cut(s)	399, 450, 518, 1091
Bst2UI	CCWGG	5 cut(s)	544, 1446, 1656, 1795, 1845
Bst4CI	ACNGT	2 cut(s)	181, 1469
Bst6I	CTCTTC	5 cut(s)	260, 876, 1035, 1317, 1581
BstACI	GRCGYC	1 cut(s)	814
BstBAI	YACGTR	1 cut(s)	890
BstC8I	GCNNGC	4 cut(s)	774, 1098, 1378, 1698
BstDEI	CTNAG	1 cut(s)	1263
BstF5I	GGATG	4 cut(s)	409, 1204, 1783, 1853
BstFNI	CGCG	2 cut(s)	35, 795
BstH2I	RGCGCY	1 cut(s)	817
BstHHI	GCGC	3 cut(s)	37, 795, 816
BstKTI	GATC	7 cut(s)	221, 276, 435, 1536, 1540, 1693, 1790
BstMAI	GTCTC	1 cut(s)	1409
BstMBI	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
BstMCI	CGRYCG	2 cut(s)	96, 221
BstMWI	GCNNNNNNNGC	2 cut(s)	799, 1571
BstNI	CCWGG	5 cut(s)	544, 1446, 1656, 1795, 1845
BstNSI	RCATGY	5 cut(s)	257, 802, 1062, 1380, 1422
BstSCI	CCNGG	6 cut(s)	124, 542, 1444, 1654, 1793, 1843
BstSFI	CTRYAG	3 cut(s)	1566, 1698, 1770
BstSLI	GKGCMC	3 cut(s)	242, 354, 1002
BstUI	CGCG	2 cut(s)	35, 795
BstV1I	GCAGC	3 cut(s)	1020, 1558, 1841
BstXI	CCANNNNNNTGG	1 cut(s)	1167
BstZI	CGGCCG	1 cut(s)	93
Bsu15I	ATCGAT	2 cut(s)	435, 1536
BsuRI	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
BsuTUI	ATCGAT	2 cut(s)	435, 1536
BtgZI	GCGATG	1 cut(s)	341
BtrI	CACGTC	1 cut(s)	1453
BtsCI	GGATG	4 cut(s)	409, 1204, 1783, 1853
BtsIMutI	CAGTG	1 cut(s)	177
BveI	ACCTGC	1 cut(s)	16
Cac8I	GCNNGC	4 cut(s)	774, 1098, 1378, 1698
CaiI	CAGNNNCTG	1 cut(s)	1673
CciI	TCATGA	3 cut(s)	835, 874, 1762
CfoI	GCGC	3 cut(s)	37, 795, 816
Cfr13I	GGNCC	1 cut(s)	123
ClaI	ATCGAT	2 cut(s)	435, 1536
Csp6I	GTAC	5 cut(s)	632, 660, 706, 1781, 1851
CviQI	GTAC	5 cut(s)	632, 660, 706, 1781, 1851
DdeI	CTNAG	1 cut(s)	1263
DinI	GGCGCC	1 cut(s)	815
DpnI	GATC	7 cut(s)	220, 275, 434, 1535, 1539, 1692, 1789
DpnII	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
DraI	TTTAAA	2 cut(s)	445, 1179
EaeI	YGGCCR	2 cut(s)	93, 1841
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	5 cut(s)	260, 876, 1035, 1317, 1581
EarI	CTCTTC	5 cut(s)	260, 876, 1035, 1317, 1581
Ecl136II	GAGCTC	1 cut(s)	1049
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	4 cut(s)	399, 450, 518, 1091
Eco147I	AGGCCT	2 cut(s)	993, 1096
Eco24I	GRGCYC	1 cut(s)	1051
Eco52I	CGGCCG	1 cut(s)	93
Eco53kI	GAGCTC	1 cut(s)	1049
Eco57I	CTGAAG	7 cut(s)	132, 332, 516, 1059, 1131, 1406, 1701
Eco88I	CYCGRG	1 cut(s)	1001
EcoICRI	GAGCTC	1 cut(s)	1049
EcoRI	GAATTC	1 cut(s)	297
EcoRII	CCWGG	5 cut(s)	542, 1444, 1654, 1793, 1843
EcoT14I	CCWWGG	4 cut(s)	399, 450, 518, 1091
EcoT22I	ATGCAT	1 cut(s)	1078
EcoT38I	GRGCYC	1 cut(s)	1051
EgeI	GGCGCC	1 cut(s)	815
EheI	GGCGCC	1 cut(s)	815
ErhI	CCWWGG	4 cut(s)	399, 450, 518, 1091
FaqI	GGGAC	1 cut(s)	199
Fnu4HI	GCNGC	9 cut(s)	38, 41, 93, 391, 1034, 1374, 1572, 1830, 1841
FokI	GGATG	3 cut(s)	416, 1211, 1790
FriOI	GRGCYC	1 cut(s)	1051
Fsp4HI	GCNGC	9 cut(s)	38, 41, 93, 391, 1034, 1374, 1572, 1830, 1841
FspBI	CTAG	3 cut(s)	1092, 1541, 1785
GlaI	GCGC	3 cut(s)	36, 794, 815
GluI	GCNGC	9 cut(s)	38, 41, 93, 391, 1034, 1374, 1572, 1830, 1841
GsaI	CCCAGC	1 cut(s)	390
GsuI	CTGGAG	1 cut(s)	1005
HaeII	RGCGCY	1 cut(s)	817
HaeIII	GGCC	7 cut(s)	95, 124, 993, 1096, 1481, 1813, 1843
HapII	CCGG	2 cut(s)	96, 126
HhaI	GCGC	3 cut(s)	37, 795, 816
Hin1I	GRCGYC	1 cut(s)	814
Hin6I	GCGC	3 cut(s)	35, 793, 814
HinP1I	GCGC	3 cut(s)	35, 793, 814
HincII	GTYRAC	2 cut(s)	965, 1551
HindII	GTYRAC	2 cut(s)	965, 1551
HinfI	GANTC	8 cut(s)	137, 198, 209, 512, 1351, 1489, 1733, 1757
HpaII	CCGG	2 cut(s)	96, 126
HphI	GGTGA	6 cut(s)	127, 329, 371, 575, 818, 860
Hpy166II	GTNNAC	3 cut(s)	352, 965, 1551
Hpy188I	TCNGA	7 cut(s)	64, 151, 223, 628, 1365, 1738, 1753
Hpy8I	GTNNAC	3 cut(s)	352, 965, 1551
Hpy99I	CGWCG	3 cut(s)	831, 1473, 1742
HpyCH4III	ACNGT	2 cut(s)	181, 1469
HpyCH4IV	ACGT	3 cut(s)	826, 889, 1452
HpyCH4V	TGCA	8 cut(s)	352, 1076, 1401, 1422, 1667, 1700, 1772, 1829
HpyF10VI	GCNNNNNNNGC	2 cut(s)	799, 1571
HpyF3I	CTNAG	1 cut(s)	1263
HpySE526I	ACGT	3 cut(s)	826, 889, 1452
Hsp92I	GRCGYC	1 cut(s)	814
HspAI	GCGC	3 cut(s)	35, 793, 814
KasI	GGCGCC	1 cut(s)	813
KpnI	GGTACC	1 cut(s)	635
Kzo9I	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
LguI	GCTCTTC	2 cut(s)	260, 1581
LmnI	GCTCC	2 cut(s)	55, 769
Lsp1109I	GCAGC	3 cut(s)	1020, 1558, 1841
LweI	GCATC	3 cut(s)	1020, 1146, 1552
MaeI	CTAG	3 cut(s)	1092, 1541, 1785
MaeII	ACGT	3 cut(s)	826, 889, 1452
MaeIII	GTNAC	4 cut(s)	694, 1054, 1356, 1517
MalI	GATC	7 cut(s)	220, 275, 434, 1535, 1539, 1692, 1789
MboI	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
MhlI	GDGCHC	5 cut(s)	242, 354, 1002, 1051, 1120
Mly113I	GGCGCC	1 cut(s)	814
MlyI	GAGTC	2 cut(s)	207, 1483
MmeI	TCCRAC	2 cut(s)	326, 1761
Mph1103I	ATGCAT	1 cut(s)	1078
MroXI	GAANNNNTTC	2 cut(s)	297, 1628
MseI	TTAA	8 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587
MslI	CAYNNNNRTG	2 cut(s)	357, 1365
MspA1I	CMGCKG	2 cut(s)	390, 1571
MspI	CCGG	2 cut(s)	96, 126
MspR9I	CCNGG	6 cut(s)	126, 544, 1446, 1656, 1795, 1845
Mva1269I	GAATGC	1 cut(s)	1403
MvaI	CCWGG	5 cut(s)	544, 1446, 1656, 1795, 1845
MvnI	CGCG	2 cut(s)	35, 795
MwoI	GCNNNNNNNGC	2 cut(s)	799, 1571
NarI	GGCGCC	1 cut(s)	814
NciI	CCSGG	1 cut(s)	126
NdeII	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
NlaIV	GGNNCC	4 cut(s)	57, 525, 633, 815
NmuCI	GTSAC	3 cut(s)	694, 1054, 1517
NsiI	ATGCAT	1 cut(s)	1078
NspI	RCATGY	5 cut(s)	257, 802, 1062, 1380, 1422
OliI	CACNNNNGTG	1 cut(s)	357
PaeI	GCATGC	1 cut(s)	1380
PagI	TCATGA	3 cut(s)	835, 874, 1762
PceI	AGGCCT	2 cut(s)	993, 1096
PciI	ACATGT	2 cut(s)	253, 1058
PciSI	GCTCTTC	2 cut(s)	260, 1581
PctI	GAATGC	1 cut(s)	1403
PdmI	GAANNNNTTC	2 cut(s)	297, 1628
PfeI	GAWTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
PflFI	GACNNNGTC	1 cut(s)	197
PkrI	GCNGC	9 cut(s)	39, 42, 94, 392, 1035, 1375, 1573, 1831, 1842
Ple19I	CGATCG	1 cut(s)	221
PleI	GAGTC	2 cut(s)	206, 1483
PluTI	GGCGCC	1 cut(s)	817
PpsI	GAGTC	2 cut(s)	206, 1483
Ppu21I	YACGTR	1 cut(s)	890
PscI	ACATGT	2 cut(s)	253, 1058
PsiI	TTATAA	1 cut(s)	900
Psp124BI	GAGCTC	1 cut(s)	1051
Psp6I	CCWGG	5 cut(s)	542, 1444, 1654, 1793, 1843
PspFI	CCCAGC	1 cut(s)	386
PspGI	CCWGG	5 cut(s)	542, 1444, 1654, 1793, 1843
PspN4I	GGNNCC	4 cut(s)	57, 525, 633, 815
PspPI	GGNCC	1 cut(s)	123
PstI	CTGCAG	2 cut(s)	1702, 1774
PstNI	CAGNNNCTG	1 cut(s)	1673
PsyI	GACNNNGTC	1 cut(s)	197
PvuI	CGATCG	1 cut(s)	221
PvuII	CAGCTG	1 cut(s)	1571
RsaI	GTAC	5 cut(s)	633, 661, 707, 1782, 1852
RsaNI	GTAC	5 cut(s)	632, 660, 706, 1781, 1851
RseI	CAYNNNNRTG	2 cut(s)	357, 1365
SacI	GAGCTC	1 cut(s)	1051
SapI	GCTCTTC	2 cut(s)	260, 1581
SaqAI	TTAA	8 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587
SatI	GCNGC	9 cut(s)	38, 41, 93, 391, 1034, 1374, 1572, 1830, 1841
Sau3AI	GATC	7 cut(s)	218, 273, 432, 1533, 1537, 1690, 1787
Sau96I	GGNCC	1 cut(s)	123
ScaI	AGTACT	1 cut(s)	707
SchI	GAGTC	2 cut(s)	207, 1483
ScrFI	CCNGG	6 cut(s)	126, 544, 1446, 1656, 1795, 1845
SduI	GDGCHC	5 cut(s)	242, 354, 1002, 1051, 1120
SfaNI	GCATC	3 cut(s)	1020, 1146, 1552
SfcI	CTRYAG	3 cut(s)	1566, 1698, 1770
SfoI	GGCGCC	1 cut(s)	815
SmiMI	CAYNNNNRTG	2 cut(s)	357, 1365
SmlI	CTYRAG	3 cut(s)	345, 591, 644
SmoI	CTYRAG	3 cut(s)	345, 591, 644
SphI	GCATGC	1 cut(s)	1380
SseBI	AGGCCT	2 cut(s)	993, 1096
SsiI	CCGC	9 cut(s)	38, 41, 76, 92, 113, 390, 1374, 1621, 1840
SspDI	GGCGCC	1 cut(s)	813
SspI	AATATT	1 cut(s)	1335
SspMI	CTAG	3 cut(s)	1092, 1541, 1785
SstI	GAGCTC	1 cut(s)	1051
StuI	AGGCCT	2 cut(s)	993, 1096
StyD4I	CCNGG	6 cut(s)	124, 542, 1444, 1654, 1793, 1843
StyI	CCWWGG	4 cut(s)	399, 450, 518, 1091
TaaI	ACNGT	2 cut(s)	181, 1469
TaiI	ACGT	3 cut(s)	829, 892, 1455
TaqI	TCGA	8 cut(s)	21, 140, 291, 435, 1413, 1471, 1503, 1536
TatI	WGTACW	1 cut(s)	705
TauI	GCSGC	6 cut(s)	40, 43, 95, 393, 1376, 1843
TfiI	GAWTC	6 cut(s)	137, 209, 512, 1351, 1733, 1757
Tru1I	TTAA	8 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587
Tru9I	TTAA	8 cut(s)	444, 612, 710, 915, 1178, 1296, 1305, 1587
TscAI	CASTG	1 cut(s)	184
TseFI	GTSAC	3 cut(s)	694, 1054, 1517
TseI	GCWGC	3 cut(s)	1033, 1571, 1829
Tsp45I	GTSAC	3 cut(s)	694, 1054, 1517
TspGWI	ACGGA	3 cut(s)	210, 685, 1755
TspRI	CASTG	1 cut(s)	184
Tth111I	GACNNNGTC	1 cut(s)	197
VneI	GTGCAC	1 cut(s)	350
XapI	RAATTY	5 cut(s)	297, 1085, 1180, 1250, 1292
XbaI	TCTAGA	1 cut(s)	1540
XceI	RCATGY	5 cut(s)	257, 802, 1062, 1380, 1422
XmaJI	CCTAGG	1 cut(s)	1091
XmnI	GAANNNNTTC	2 cut(s)	297, 1628
XspI	CTAG	3 cut(s)	1092, 1541, 1785
ZrmI	AGTACT	1 cut(s)	707
Zsp2I	ATGCAT	1 cut(s)	1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.