PITH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04780 |
| fragaria_vesca | FvH4_6g03140 |
| malus_domestica | MD04G1222600.v1.1 MD12G1238700.v1.1 |
| prunus_persica | Prupe.6G341600_v2.0.a1 |
| pyrus_communis | pycom04g19690 pycom12g21940 |
| rosa_chinensis | RchiOBHm_Chr3g0451391 |
| rosa_laevigata | RLG00000025663 |
| rosa_multiflora | Rmu_sc0021369.1_g000001 |
| rosa_roxburghii | Rroxscaffold_164G00436530 Rroxscaffold_6G00428810 |
| rosa_rugosa | Rorug02G0633500 |
| rosa_samantha | Rh3AG036500 Rh3BG037100 Rh3CG035700 Rh3DG036600 |
| rosa_wichuraiana | Rw3G002690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 167, 474 |
| AcuI | CTGAAG | 1 cut(s) | 261 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 234 |
| AluBI | AGCT | 3 cut(s) | 17, 178, 405 |
| AluI | AGCT | 3 cut(s) | 17, 178, 405 |
| Alw21I | GWGCWC | 1 cut(s) | 288 |
| AoxI | GGCC | 1 cut(s) | 236 |
| ApeKI | GCWGC | 2 cut(s) | 175, 402 |
| AspS9I | GGNCC | 2 cut(s) | 236, 251 |
| AsuHPI | GGTGA | 1 cut(s) | 217 |
| AvaII | GGWCC | 1 cut(s) | 251 |
| BbsI | GAAGAC | 1 cut(s) | 249 |
| Bbv12I | GWGCWC | 1 cut(s) | 288 |
| BbvI | GCAGC | 2 cut(s) | 187, 414 |
| BccI | CCATC | 1 cut(s) | 137 |
| BfaI | CTAG | 1 cut(s) | 18 |
| BisI | GCNGC | 2 cut(s) | 176, 403 |
| BlsI | GCNGC | 2 cut(s) | 177, 404 |
| Bme18I | GGWCC | 1 cut(s) | 251 |
| BmgT120I | GGNCC | 2 cut(s) | 236, 251 |
| BmrI | ACTGGG | 1 cut(s) | 359 |
| BmsI | GCATC | 1 cut(s) | 154 |
| BmuI | ACTGGG | 1 cut(s) | 359 |
| BoxI | GACNNNNGTC | 1 cut(s) | 249 |
| BpiI | GAAGAC | 1 cut(s) | 249 |
| BpmI | CTGGAG | 1 cut(s) | 176 |
| BpuEI | CTTGAG | 1 cut(s) | 104 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 234 |
| Bse1I | ACTGG | 1 cut(s) | 365 |
| BseGI | GGATG | 1 cut(s) | 175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 234 |
| BseNI | ACTGG | 1 cut(s) | 365 |
| BseXI | GCAGC | 2 cut(s) | 187, 414 |
| BseYI | CCCAGC | 1 cut(s) | 316 |
| BshFI | GGCC | 1 cut(s) | 238 |
| BsiHKAI | GWGCWC | 1 cut(s) | 288 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 234 |
| BsmI | GAATGC | 1 cut(s) | 83 |
| BsnI | GGCC | 1 cut(s) | 238 |
| Bsp1286I | GDGCHC | 1 cut(s) | 288 |
| Bsp143I | GATC | 1 cut(s) | 43 |
| BspACI | CCGC | 2 cut(s) | 167, 474 |
| BspANI | GGCC | 1 cut(s) | 238 |
| BsrI | ACTGG | 1 cut(s) | 365 |
| BssMI | GATC | 1 cut(s) | 43 |
| Bst4CI | ACNGT | 3 cut(s) | 262, 412, 484 |
| BstDEI | CTNAG | 1 cut(s) | 255 |
| BstF5I | GGATG | 1 cut(s) | 175 |
| BstKTI | GATC | 1 cut(s) | 46 |
| BstMBI | GATC | 1 cut(s) | 43 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 249 |
| BstV1I | GCAGC | 2 cut(s) | 187, 414 |
| BstV2I | GAAGAC | 1 cut(s) | 249 |
| BsuRI | GGCC | 1 cut(s) | 238 |
| BtgZI | GCGATG | 1 cut(s) | 177 |
| BtsCI | GGATG | 1 cut(s) | 175 |
| BtsIMutI | CAGTG | 1 cut(s) | 529 |
| Cfr13I | GGNCC | 2 cut(s) | 236, 251 |
| CviAII | CATG | 2 cut(s) | 289, 499 |
| CviJI | RGCY | 5 cut(s) | 17, 36, 178, 238, 405 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 36, 178, 238, 405 |
| DdeI | CTNAG | 1 cut(s) | 255 |
| DpnI | GATC | 1 cut(s) | 45 |
| DpnII | GATC | 1 cut(s) | 43 |
| Eco47I | GGWCC | 1 cut(s) | 251 |
| Eco57I | CTGAAG | 1 cut(s) | 261 |
| EcoO109I | RGGNCCY | 2 cut(s) | 236, 251 |
| FaeI | CATG | 2 cut(s) | 292, 502 |
| FaiI | YATR | 7 cut(s) | 59, 132, 189, 191, 290, 381, 500 |
| FatI | CATG | 2 cut(s) | 288, 498 |
| Fnu4HI | GCNGC | 2 cut(s) | 176, 403 |
| FokI | GGATG | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 2 cut(s) | 176, 403 |
| FspBI | CTAG | 1 cut(s) | 18 |
| GluI | GCNGC | 2 cut(s) | 176, 403 |
| GsaI | CCCAGC | 1 cut(s) | 320 |
| GsuI | CTGGAG | 1 cut(s) | 176 |
| HaeIII | GGCC | 1 cut(s) | 238 |
| Hin1II | CATG | 2 cut(s) | 292, 502 |
| HinfI | GANTC | 4 cut(s) | 11, 151, 294, 443 |
| HphI | GGTGA | 1 cut(s) | 217 |
| Hpy188I | TCNGA | 1 cut(s) | 442 |
| Hpy188III | TCNNGA | 1 cut(s) | 155 |
| HpyAV | CCTTC | 4 cut(s) | 238, 242, 349, 496 |
| HpyCH4III | ACNGT | 3 cut(s) | 262, 412, 484 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 1 cut(s) | 23 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| HpyF3I | CTNAG | 1 cut(s) | 255 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 2 cut(s) | 292, 502 |
| Kzo9I | GATC | 1 cut(s) | 43 |
| LmnI | GCTCC | 1 cut(s) | 283 |
| LpnPI | CCDG | 8 cut(s) | 54, 110, 140, 252, 330, 357, 378, 420 |
| Lsp1109I | GCAGC | 2 cut(s) | 187, 414 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 18 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 1 cut(s) | 323 |
| MalI | GATC | 1 cut(s) | 45 |
| MboI | GATC | 1 cut(s) | 43 |
| MboII | GAAGA | 4 cut(s) | 149, 191, 254, 523 |
| MhlI | GDGCHC | 1 cut(s) | 288 |
| MluCI | AATT | 2 cut(s) | 349, 516 |
| MnlI | CCTC | 3 cut(s) | 92, 415, 514 |
| Mva1269I | GAATGC | 1 cut(s) | 83 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 1 cut(s) | 43 |
| NlaIII | CATG | 2 cut(s) | 292, 502 |
| NmuCI | GTSAC | 1 cut(s) | 323 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 488 |
| PctI | GAATGC | 1 cut(s) | 83 |
| PfeI | GAWTC | 4 cut(s) | 11, 151, 294, 443 |
| PkrI | GCNGC | 2 cut(s) | 177, 404 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| PshAI | GACNNNNGTC | 1 cut(s) | 249 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| PspFI | CCCAGC | 1 cut(s) | 316 |
| PspPI | GGNCC | 2 cut(s) | 236, 251 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| SatI | GCNGC | 2 cut(s) | 176, 403 |
| Sau3AI | GATC | 1 cut(s) | 43 |
| Sau96I | GGNCC | 2 cut(s) | 236, 251 |
| SduI | GDGCHC | 1 cut(s) | 288 |
| SetI | ASST | 7 cut(s) | 19, 180, 196, 230, 253, 306, 407 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SinI | GGWCC | 1 cut(s) | 251 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| Sse9I | AATT | 2 cut(s) | 349, 516 |
| SsiI | CCGC | 2 cut(s) | 167, 474 |
| SspMI | CTAG | 1 cut(s) | 18 |
| TaaI | ACNGT | 3 cut(s) | 262, 412, 484 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 1 cut(s) | 420 |
| TasI | AATT | 2 cut(s) | 349, 516 |
| TfiI | GAWTC | 4 cut(s) | 11, 151, 294, 443 |
| TseFI | GTSAC | 1 cut(s) | 323 |
| TseI | GCWGC | 2 cut(s) | 175, 402 |
| Tsp45I | GTSAC | 1 cut(s) | 323 |
| TspDTI | ATGAA | 2 cut(s) | 46, 515 |
| VpaK11BI | GGWCC | 1 cut(s) | 251 |
| XspI | CTAG | 1 cut(s) | 18 |