PITH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04780 |
| fragaria_vesca | FvH4_6g03140 |
| malus_domestica | MD04G1222600.v1.1 MD12G1238700.v1.1 |
| prunus_persica | Prupe.6G341600_v2.0.a1 |
| pyrus_communis | pycom04g19690 pycom12g21940 |
| rosa_chinensis | RchiOBHm_Chr3g0451391 |
| rosa_laevigata | RLG00000025663 |
| rosa_multiflora | Rmu_sc0021369.1_g000001 |
| rosa_roxburghii | Rroxscaffold_164G00436530 Rroxscaffold_6G00428810 |
| rosa_rugosa | Rorug02G0633500 |
| rosa_samantha | Rh3AG036500 Rh3BG037100 Rh3CG035700 Rh3DG036600 |
| rosa_wichuraiana | Rw3G002690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 15 |
| AciI | CCGC | 2 cut(s) | 173, 332 |
| AcsI | RAATTY | 1 cut(s) | 146 |
| AcuI | CTGAAG | 1 cut(s) | 426 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 57 |
| AgsI | TTSAA | 9 cut(s) | 74, 242, 316, 368, 441, 541, 557, 623, 676 |
| AluBI | AGCT | 3 cut(s) | 92, 343, 570 |
| AluI | AGCT | 3 cut(s) | 92, 343, 570 |
| Alw21I | GWGCWC | 1 cut(s) | 453 |
| AoxI | GGCC | 1 cut(s) | 401 |
| ApeKI | GCWGC | 2 cut(s) | 340, 567 |
| ApoI | RAATTY | 1 cut(s) | 146 |
| AspS9I | GGNCC | 2 cut(s) | 401, 416 |
| AvaII | GGWCC | 1 cut(s) | 416 |
| BanI | GGYRCC | 1 cut(s) | 15 |
| BbsI | GAAGAC | 1 cut(s) | 414 |
| Bbv12I | GWGCWC | 1 cut(s) | 453 |
| BbvI | GCAGC | 2 cut(s) | 352, 579 |
| BccI | CCATC | 2 cut(s) | 118, 302 |
| BceAI | ACGGC | 1 cut(s) | 3 |
| BfaI | CTAG | 1 cut(s) | 77 |
| BisI | GCNGC | 2 cut(s) | 341, 568 |
| BlsI | GCNGC | 2 cut(s) | 342, 569 |
| Bme18I | GGWCC | 1 cut(s) | 416 |
| BmgT120I | GGNCC | 2 cut(s) | 401, 416 |
| BmiI | GGNNCC | 1 cut(s) | 17 |
| BmsI | GCATC | 1 cut(s) | 319 |
| BoxI | GACNNNNGTC | 1 cut(s) | 414 |
| BpiI | GAAGAC | 1 cut(s) | 414 |
| BpmI | CTGGAG | 1 cut(s) | 341 |
| BpuEI | CTTGAG | 1 cut(s) | 269 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 57 |
| Bse1I | ACTGG | 2 cut(s) | 183, 530 |
| Bse3DI | GCAATG | 1 cut(s) | 472 |
| BseGI | GGATG | 1 cut(s) | 340 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BseMI | GCAATG | 1 cut(s) | 472 |
| BseNI | ACTGG | 2 cut(s) | 183, 530 |
| BseXI | GCAGC | 2 cut(s) | 352, 579 |
| BseYI | CCCAGC | 1 cut(s) | 481 |
| BsgI | GTGCAG | 1 cut(s) | 365 |
| BshFI | GGCC | 1 cut(s) | 403 |
| BshNI | GGYRCC | 1 cut(s) | 15 |
| BsiHKAI | GWGCWC | 1 cut(s) | 453 |
| BsiSI | CCGG | 1 cut(s) | 600 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BsmI | GAATGC | 1 cut(s) | 248 |
| BsnI | GGCC | 1 cut(s) | 403 |
| Bsp1286I | GDGCHC | 1 cut(s) | 453 |
| BspACI | CCGC | 2 cut(s) | 173, 332 |
| BspANI | GGCC | 1 cut(s) | 403 |
| BspLI | GGNNCC | 1 cut(s) | 17 |
| BspT107I | GGYRCC | 1 cut(s) | 15 |
| BsrDI | GCAATG | 1 cut(s) | 472 |
| BsrI | ACTGG | 2 cut(s) | 183, 530 |
| Bst4CI | ACNGT | 4 cut(s) | 15, 427, 577, 649 |
| Bst6I | CTCTTC | 1 cut(s) | 60 |
| BstDEI | CTNAG | 1 cut(s) | 420 |
| BstF5I | GGATG | 1 cut(s) | 340 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 170, 179 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 414 |
| BstV1I | GCAGC | 2 cut(s) | 352, 579 |
| BstV2I | GAAGAC | 1 cut(s) | 414 |
| BsuRI | GGCC | 1 cut(s) | 403 |
| BtgZI | GCGATG | 1 cut(s) | 342 |
| BtsCI | GGATG | 1 cut(s) | 340 |
| BtsIMutI | CAGTG | 2 cut(s) | 190, 694 |
| Cfr13I | GGNCC | 2 cut(s) | 401, 416 |
| CviAII | CATG | 3 cut(s) | 166, 454, 664 |
| DdeI | CTNAG | 1 cut(s) | 420 |
| Eam1104I | CTCTTC | 1 cut(s) | 60 |
| EarI | CTCTTC | 1 cut(s) | 60 |
| Eco47I | GGWCC | 1 cut(s) | 416 |
| Eco57I | CTGAAG | 1 cut(s) | 426 |
| EcoO109I | RGGNCCY | 2 cut(s) | 401, 416 |
| FaeI | CATG | 3 cut(s) | 169, 457, 667 |
| FatI | CATG | 3 cut(s) | 165, 453, 663 |
| Fnu4HI | GCNGC | 2 cut(s) | 341, 568 |
| FokI | GGATG | 1 cut(s) | 347 |
| Fsp4HI | GCNGC | 2 cut(s) | 341, 568 |
| FspBI | CTAG | 1 cut(s) | 77 |
| GluI | GCNGC | 2 cut(s) | 341, 568 |
| GsaI | CCCAGC | 1 cut(s) | 485 |
| GsuI | CTGGAG | 1 cut(s) | 341 |
| HaeIII | GGCC | 1 cut(s) | 403 |
| HapII | CCGG | 1 cut(s) | 600 |
| Hin1II | CATG | 3 cut(s) | 169, 457, 667 |
| HinfI | GANTC | 4 cut(s) | 67, 176, 316, 459 |
| HpaII | CCGG | 1 cut(s) | 600 |
| Hpy188I | TCNGA | 1 cut(s) | 66 |
| Hpy188III | TCNNGA | 1 cut(s) | 320 |
| Hpy99I | CGWCG | 1 cut(s) | 649 |
| HpyAV | CCTTC | 3 cut(s) | 57, 407, 661 |
| HpyCH4III | ACNGT | 4 cut(s) | 15, 427, 577, 649 |
| HpyCH4V | TGCA | 2 cut(s) | 188, 382 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 170, 179 |
| HpyF3I | CTNAG | 1 cut(s) | 420 |
| Hsp92II | CATG | 3 cut(s) | 169, 457, 667 |
| LmnI | GCTCC | 1 cut(s) | 448 |
| LpnPI | CCDG | 9 cut(s) | 196, 219, 275, 305, 417, 495, 522, 543, 613 |
| Lsp1109I | GCAGC | 2 cut(s) | 352, 579 |
| LweI | GCATC | 1 cut(s) | 319 |
| MaeI | CTAG | 1 cut(s) | 77 |
| MaeIII | GTNAC | 2 cut(s) | 488, 610 |
| MboII | GAAGA | 6 cut(s) | 47, 62, 314, 356, 419, 688 |
| MhlI | GDGCHC | 1 cut(s) | 453 |
| MluCI | AATT | 2 cut(s) | 146, 681 |
| MmeI | TCCRAC | 1 cut(s) | 163 |
| MnlI | CCTC | 6 cut(s) | 61, 110, 139, 257, 580, 679 |
| MseI | TTAA | 2 cut(s) | 152, 375 |
| MspI | CCGG | 1 cut(s) | 600 |
| Mva1269I | GAATGC | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 170, 179 |
| NlaIII | CATG | 3 cut(s) | 169, 457, 667 |
| NlaIV | GGNNCC | 1 cut(s) | 17 |
| NmuCI | GTSAC | 2 cut(s) | 488, 610 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 653 |
| PctI | GAATGC | 1 cut(s) | 248 |
| PfeI | GAWTC | 4 cut(s) | 67, 176, 316, 459 |
| PkrI | GCNGC | 2 cut(s) | 342, 569 |
| PpuMI | RGGWCCY | 1 cut(s) | 416 |
| PshAI | GACNNNNGTC | 1 cut(s) | 414 |
| Psp5II | RGGWCCY | 1 cut(s) | 416 |
| PspFI | CCCAGC | 1 cut(s) | 481 |
| PspN4I | GGNNCC | 1 cut(s) | 17 |
| PspPI | GGNCC | 2 cut(s) | 401, 416 |
| PspPPI | RGGWCCY | 1 cut(s) | 416 |
| SaqAI | TTAA | 2 cut(s) | 152, 375 |
| SatI | GCNGC | 2 cut(s) | 341, 568 |
| Sau96I | GGNCC | 2 cut(s) | 401, 416 |
| SduI | GDGCHC | 1 cut(s) | 453 |
| SetI | ASST | 5 cut(s) | 94, 345, 361, 418, 572 |
| SfaNI | GCATC | 1 cut(s) | 319 |
| SinI | GGWCC | 1 cut(s) | 416 |
| SmlI | CTYRAG | 1 cut(s) | 284 |
| SmoI | CTYRAG | 1 cut(s) | 284 |
| Sse9I | AATT | 2 cut(s) | 146, 681 |
| SsiI | CCGC | 2 cut(s) | 173, 332 |
| SspMI | CTAG | 1 cut(s) | 77 |
| TaaI | ACNGT | 4 cut(s) | 15, 427, 577, 649 |
| TaqI | TCGA | 1 cut(s) | 585 |
| TasI | AATT | 2 cut(s) | 146, 681 |
| TfiI | GAWTC | 4 cut(s) | 67, 176, 316, 459 |
| Tru1I | TTAA | 2 cut(s) | 152, 375 |
| Tru9I | TTAA | 2 cut(s) | 152, 375 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TseFI | GTSAC | 2 cut(s) | 488, 610 |
| TseI | GCWGC | 2 cut(s) | 340, 567 |
| Tsp45I | GTSAC | 2 cut(s) | 488, 610 |
| TspDTI | ATGAA | 2 cut(s) | 211, 680 |
| TspGWI | ACGGA | 1 cut(s) | 114 |
| TspRI | CASTG | 1 cut(s) | 190 |
| VpaK11BI | GGWCC | 1 cut(s) | 416 |
| XapI | RAATTY | 1 cut(s) | 146 |
| XspI | CTAG | 1 cut(s) | 77 |