Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0009239

Physical Location & Seq

Genomic Coordinates Reverse (-)

21438398 .. 21445894

Gene Structure 7497 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5052 bp

ATGGCGTCGGAGCTAGGGCAACAGACGGTGGGGTTCTCCGCCCTGGTGAGCCGCGCCGCCGAGGAATCTTTCCTCGCGCTGAAAGAGCTCACCGAGAAATCGAAGGCGGCGCCGGACCAGTCCGATACCGATAAGAAAATTGGACTGCTGAAGTACTTGGCCAAGACCCAGCAACGCATGCTCAGGCTCAATGTCCTCGCCAAGTGGTGCCAACAGGTCCCGTTAATACAATACTGCCAGCAACTTTCCTCCACTCTATCAAGTCATGATACCTGTTTCACTCAAGCAGCAGATTCACTATTTTTCATGCATGATGGGCTGCAGCAAGCTTGTGCTCCTGTTTACGATGTCCCATCTGCAATTGAAATCCTCCTAACAGGGTCATATCAGCGTTTGCCGAAATGTGTAGAAGATGTGGGCATCCAGAGTTCACTAGATGAGGAACAGCAGAAGCCGGCTTTGAACAAGCTGGACACACTTGTGCGATCTAAATTACTAGAAGTATCACTTCCAAAAGAAATTACTGATGTTAAAGTCTCCGATGGTACAGCAGTGATTCGTGTTGATGGAGAATTCAAGGTTTTGGTGACTCTAGGCTACCGAGGGCACCTATCAATGTGGAGGATACTGCATTTGGATCTGCTTGTTGGTGAGAAAAGTGGACCTGTAAAGCTTGAAGTATCGCGGCGTCATCTTCTTGGGGATGATTTAGAGCGCAGAATGGCTGATGCAGAAGATCCGTTCATGATACTTTACTCAGTTTTGCATGAGCTTTGTGTTGCACTTATCATGGGTACTGTCACAAGGCAAGTACAAGCTCTTCGGCAAGGGAGATGGAAAGACGCAATTCGATTTGAGCTTATATCTGATGGGAGCACGGGTCATGCAGGGACTTCTGCCTCTGCGCAATCAAATCAAGATGGAGAAACTGATTCATCTGGTCTACGAACGCCAGGGTTGAAAATTTTATACTGGCTAGATTTTGATAAAAACAATGGTATTTCTGGTTCAGGATCATGTCCGTCTATAAAAATTGAACCAGGACCGGATCTGCAGATAAAGTGTCTTCATAGCACATTTGTCATAGATCCATTAACTGGAAAGGAGGCAGAATTTTCTCTCGACCAAAACTGTATTGATGTTGAGAAGTTGCTTCTGAGAGCCATCTGCTGTAATAGATATACTCGTCTGCTTGAAATTCAGAAAGAGCTGGTGAAGAATGTTCAAATCTGCCGAGGTGCAGGGGATGTTTCTCTTCAGTCTCATGTGGAAGAAGTGGATGCAGACCATAAAAAGAAAGATGATAAGTCAAATGCTGGAGAGTATGAAGGGCAGGAAGTATTACGTGTGCGTGCCTATGGCTCATCATTTTTCACCCTGGGAATAAATTTAAGGAATGGGCGATTTCTTCTTCAGTCCTCTCGTAATATTCTTGCTTCTTCGGGAGTTTTGTCCGAATTTGAAGATGCTTTAAATCAAGGAAGTATGAATGCAGCTGAAGTTTTCATAAGCTTGAGAATCAAAAGTATTTTGCACTTATTTGCATCGACTGGCAGGTTTTTAGGCCTTGAGGTGTATGAACATGGTTTTCCTGCAGTTAAAATACCAAAGAACATTTTAAATGGTTCAACTATGTTGCTAATGGGGTTTCCTGATTGCGGTACCTCTTATTTCCTGCTGATGCAACTTGATAAGGACTTTAAACCCCTATTTAAATTGCTTGAAACTCATCCAGATCCGTCCAGAAAACCTGATTCTTTTAATGACCTAAATCATGTGATGCGGATCAAGAAAATTGATGTTAGCCAGATGCAGATGCATGAAGATGATATGAATTTAAGTTTGCTTGACTTGGGAAAACTACATTCCTTTCTGGCCAGTTCCAGGGGTTCTAATCAGTCTGCTGAAAATGGTCTTCTTTTGGAAATCAGCCATGAAGGTTCTATGCCTATTGCTGGGTGTCCGCCATCGAGTTTTTCTTCTGTTGTAGACGAAGTGTTTGAACTGGAGAAGGGGTTATCTGTACCTCCTTTTTCTGTTCCTGCTTCTCATTTTGGCTCTGTTCCGATGAATCGTCCCTCTCCTAAGTGGGAAGGAGGTGCGCTGATACCACAGTTAAACAATTCTTCAAAGCTTTCTAGTATGGCCACCCACTATAATGGATCATTATATCCATCAAATAATTTGAAAAGCCCCGTACATTCTACTTCTCTTGGTAATCTATCTTCTGGCCCAGGAAGGAGTGCCTCTGTGAAGAAAATACCAGTGTCAAAGTCTGATCAGGATTTGGCTTCTCTCAGGTCTCCACAGTCAGTTGAGTATGGTTCTGGTACTTCAATGGATGAAGATCAGCTGAGATTTCTGAATGAAACTCCAAAGAGTGCAATATATGGGAGTAAATCATCCCGGCTGTTATCTCCAACCCGGTCTACTGGCCCCAGAGTTTCTGGGCCAAGTGTGAGACCCAACGGGTCCAAAAGTTCACCTAATGGGCCTTTAACTGGACCTTTCAGAGTTTCCGGATCAACATGTGCAACAACTCCCGTATCCCAGGCCCCAGATTCTGGAGTATGTCATAGCCCTAATATTGATGTTGCGAAAAATGATAGAAAACCTCGCAAGCGCACACTTTCAGATATGTTGAATTTGATCCCATCACTTCAGGGTTTTAAAGCTGATTCAGGAGTTCTTAAAAAGAGGAAAACTTCTGAAGTAACTCGTCCTCAGCAGTATTCCTCACAGGTGCTTATGTCGAGGGATATAATTTCAAATTTTGAAGTCTACAATTACGGGGATCTTATATCTGAAGCAAACAGGGGAAATGCACCTTCCAGCATTTATGTTTCAGCCCTTCTTCATGTGATCAGGCACTGTTCACTTTGTATTAAGCATGCCAGATTAACTAGCCAGATGGCGGCTCTGGACATCCCTTATGTTGAAGAAGTGGGTCTAAGAAGTACATCATCAAACATATGGTTTCGAATTCCATTTGCCAGAGGTGATTCATGGCAACACTTATGCTTGCGACTTGGCAGACCTGGAAGCATTTATTGGGATGTCAAAATAAATGACCAGCATTTCAGGGATTTGTGGGAGCTTCAAAAAGGAAGCAATAGTACACCTTGGGGTACTGGTGTTCGAATTGCCAATACGTCTGACATAGACTCTCATGTTCGCTATGATCCAGAAGGTGTTGTTCTTTGTTACCAATCTGTGGAGGCTGATAGTATTAAGAAGTTAGTGGCAGACATCCAAAGACTTTCTAATGCAAGAATGTTTGCTCTTGGGATGCGGAAATTGCTTGGTGTTCGAGCAGATGATAAGCCAGAAGAAAGTAGCACAAACCCCGATTTTAAATCACCAGGAGTCAAAGGTTCTCAAGAGGCAACTGATAGACTATCTGAGCAAATGCGAAGGGCATTTAGAATTGAGGCTGTTGGACTTATGAGTCTGTGGTTCAGTTTTGGATCAGGTGTCCTTGCTCGCTTTGTTGTAGAGTGGGAATCAGGTAAAGAGGGTTGTACTATGCATGTATCCCCCGACCAACTTTGGCCCCATACCAAGTTTCTGGAAGATTTTATAAATGGAGCTGAAGTTGCATCACTTTTGGATTGCATTCGACTCACTGCAGGGCCCTTACATGCTCTTGCAGCTGCAACACGACCTGCACGAGCTAGTCCTATCCCGGGGGTCCCTGGAGGAGGAGTTCTCTCTTCTATCCCAAAACAGGCTGGGTACTTGTCATCTCAGGGCCTTATGCCAACTAGTTCAACCACAAATGCCGGTCAGTCTCCTGGCCCTATGGGGAACCCAGTTTCATCTCCTGCTACAGGGCCTCTTGCAAATCATAGCCTCCATGGGCCTGCTGGGTTAGCTGGTGCTGGCCGAGGTGGACCTGGCATTGTACCCAGCTCACTGTTGCCCATTGATGTCTCTGTTGTGCTACGTGGGCCCTATTGGATACGGATCATATACCGAAAGAATTTTGCAGTTGACATGCGCTGTTTTGCCGGAGATCAGGTTTGGTTGCAACCAGCAACGCCACCCAATGGGGGGCCTTCAATTGGAGGGTCATTACCTTGCCCTCAGTTTAGACCATTTATTATGGAGCATGTAGCCCAAGAATTGAATGGTTTAGACACTAATTTCACCGGTGGTCAACAGGCAGGACTGTCAAGTTCAATCAATCAAAACCCCAGTTCAGGTTCCCAGCTGTCAACTGTAAATGGAAATAGGGTTAACCTTCCTAGTTCTGCTGCAATGTCTAGGACAGGCAACAACCAAGTGGCTGGTTTAAACCGTGTCGGAAATGCTTCTCCAGTATCCTCAAATTTGGCTGTTGTGAGCTCAGCAGGGCCAGCTTTACGAAGATCCCCAGGTCCTGGTGTCCCTGCTCATGTGAGAGGAGAACTGAATACAGCCATTATTGGTCTTGGAGATGATGGAGGGTATGGAGGTGGTTGGGTTCCTCTTGTTGCTCTTAAAAAGGTGCTAAGAGGTATTCTCAAGTATCTTGGAGTTCTATGGCTATTCGCACAGCTACCAAATCTGTTGAAAGAGATTTTGGGGTCAATTCTGAAAGACAATGAAGGTGCCCTTCTAAATTTAGACCAGGAGCAGCCCGCCTTGAGATTCTTTGTTGGTGGCTATGTATTTGCAGTAAGCGTTCACAGAGTTCAACTTCTTCTTCGAGTACTGAGCGTGAAACGATTCCATCAGCAGCAGCAACAAGGGCAACAGCCAAATACAAACATTGCTAATGAGGAATTATCTACAGCCGAAATAGGAGAAATATGTGACTACTTCAGTCGACGTGTTGCTTCAGAGCCTTATGATGCTTCTCGGGTTGCGTCGTTCATTACTCTCCTCACCTTACCCATATCAGTTTTAAGAGAATTCTTGAAATTAATAGCATGGAAAAAAGCACTAGCCCAGTCACAAGGGGGAGATATGGCACCTGCTCAAAAACCCCGTGTTGAATTATGTCTTGAAAACCATGCTGGCTCGAGTATGGATCGATTCATCTGTTGCCAAAAGCAATATTCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008284 GO:0009266 GO:0009409 GO:0009506 GO:0009605 GO:0009607 GO:0009627 GO:0009628 GO:0009631 GO:0009814 GO:0016591 GO:0016592 GO:0030054 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0042127 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045087 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0055029 GO:0055044 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0090575 GO:0098542 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04919 map04919

Pfam Domains

Protein Families

Med14

Protein Analysis

1684

Amino Acids

183.0

Weight (kDa)

8.39

Isoelectric Point (pI)

43.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med14	PF08638	10 - 199	2.7e-50	Mediator complex subunit MED14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009239)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04740
fragaria_vesca	FvH4_6g02880 FvH4_6g02880 FvH4_6g02880 FvH4_6g02880
malus_domestica	MD04G1224900.v1.1 MD12G1241600.v1.1
prunus_persica	Prupe.6G343600_v2.0.a1
pyrus_communis	pycom04g19810 pycom12g22110
rosa_chinensis	RchiOBHm_Chr3g0451091
rosa_laevigata	RLG00000025691
rosa_multiflora	Rmu_co8423931.1_g000001 Rmu_ssc0000461.1_g000005
rosa_roxburghii	Rroxscaffold_6G00428560
rosa_rugosa	Rorug02G0631200 Rorug02G0631300
rosa_samantha	Rh3AG034200 Rh3BG034500 Rh3CG033200 Rh3DG034200
rosa_wichuraiana	Rw3G002480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3581
AarI	CACCTGC	1 cut(s)	4966
AasI	GACNNNNNNGTC	1 cut(s)	3447
Acc16I	TGCGCA	1 cut(s)	906
Acc36I	ACCTGC	3 cut(s)	1545, 3673, 4966
Acc65I	GGTACC	1 cut(s)	1661
AccB1I	GGYRCC	6 cut(s)	109, 207, 606, 1661, 4592, 4954
AccB7I	CCANNNNNTGG	5 cut(s)	1097, 2564, 3214, 4049, 4382
AccI	GTMKAC	5 cut(s)	943, 1989, 2429, 2781, 4810
AccII	CGCG	3 cut(s)	54, 77, 685
AccIII	TCCGGA	1 cut(s)	2519
AcoI	YGGCCR	4 cut(s)	159, 1875, 2145, 3883
AcyI	GRCGYC	3 cut(s)	5, 110, 688
AflIII	ACRYGT	3 cut(s)	1345, 2528, 4813
AgeI	ACCGGT	1 cut(s)	4151
AhlI	ACTAGT	1 cut(s)	3764
AjiI	CACGTC	1 cut(s)	4814
AjuI	GAANNNNNNNTTGG	4 cut(s)	3034, 3066, 4547, 4579
AleI	CACNNNNGTG	1 cut(s)	479
AloI	GAACNNNNNNTCC	2 cut(s)	3690, 3722
Alw21I	GWGCWC	4 cut(s)	90, 337, 878, 4349
Alw26I	GTCTC	6 cut(s)	541, 1266, 2307, 2455, 3795, 3937
AlwNI	CAGNNNCTG	3 cut(s)	2564, 2871, 4382
Ama87I	CYCGRG	3 cut(s)	3685, 4842, 5005
Aor13HI	TCCGGA	1 cut(s)	2519
ApaI	GGGCCC	2 cut(s)	3636, 3954
ArsI	GACNNNNNNTTYG	2 cut(s)	1982, 2014
AseI	ATTAAT	1 cut(s)	4907
AsiGI	ACCGGT	1 cut(s)	4151
Asp700I	GAANNNNTTC	2 cut(s)	4312, 4709
Asp718I	GGTACC	1 cut(s)	1661
AspLEI	GCGC	8 cut(s)	56, 79, 112, 717, 907, 2104, 2625, 4002
AsuC2I	CCSGG	4 cut(s)	2407, 2425, 3686, 3687
AsuII	TTCGAA	2 cut(s)	2980, 3139
AvaI	CYCGRG	3 cut(s)	3685, 4842, 5005
AvaII	GGWCC	9 cut(s)	115, 217, 662, 1043, 2472, 2504, 3691, 3893, 4379
BaeGI	GKGCMC	4 cut(s)	609, 3636, 3954, 4597
BaeI	ACNNNNGTAYC	8 cut(s)	537, 570, 2099, 2132, 2529, 2562, 3120, 3153
BalI	TGGCCA	3 cut(s)	161, 1877, 2147
BanI	GGYRCC	6 cut(s)	109, 207, 606, 1661, 4592, 4954
BanII	GRGCYC	4 cut(s)	90, 3636, 3954, 4349
BarI	GAAGNNNNNNTAC	6 cut(s)	804, 836, 2209, 2241, 3100, 3132
BauI	CACGAG	1 cut(s)	3669
BbsI	GAAGAC	2 cut(s)	1058, 1907
Bbv12I	GWGCWC	4 cut(s)	90, 337, 878, 4349
BbvCI	CCTCAGC	1 cut(s)	2724
BciVI	GTATCC	5 cut(s)	618, 2557, 3544, 3954, 4333
BclI	TGATCA	2 cut(s)	2278, 2862
BcnI	CCSGG	4 cut(s)	2407, 2425, 3686, 3687
BcoDI	GTCTC	6 cut(s)	541, 1266, 2307, 2455, 3795, 3937
BcuI	ACTAGT	1 cut(s)	3764
BfmI	CTRYAG	6 cut(s)	320, 1052, 1593, 3627, 3828, 4773
BfoI	RGCGCY	1 cut(s)	113
BfuAI	ACCTGC	3 cut(s)	1545, 3673, 4966
BfuI	GTATCC	5 cut(s)	618, 2557, 3544, 3954, 4333
BlpI	GCTNAGC	1 cut(s)	4348
BmcAI	AGTACT	2 cut(s)	155, 4695
Bme18I	GGWCC	9 cut(s)	115, 217, 662, 1043, 2472, 2504, 3691, 3893, 4379
BmeT110I	CYCGRG	3 cut(s)	3685, 4842, 5005
BmgBI	CACGTC	1 cut(s)	4814
BmrI	ACTGGG	3 cut(s)	3806, 4191, 4927
BmuI	ACTGGG	3 cut(s)	3806, 4191, 4927
BpiI	GAAGAC	2 cut(s)	1058, 1907
BplI	GAGNNNNNCTC	4 cut(s)	3693, 3725, 4488, 4520
BpmI	CTGGAG	5 cut(s)	1338, 2027, 2586, 3717, 4302
Bpu10I	CCTNAGC	2 cut(s)	182, 2724
Bpu1102I	GCTNAGC	1 cut(s)	4348
Bpu14I	TTCGAA	2 cut(s)	2980, 3139
BpuEI	CTTGAG	6 cut(s)	267, 1534, 1589, 3363, 4490, 4648
BpuMI	CCSGG	4 cut(s)	2407, 2425, 3686, 3687
Bsa29I	ATCGAT	1 cut(s)	5017
BsaAI	YACGTR	2 cut(s)	1346, 3947
BsaBI	GATNNNNATC	3 cut(s)	1784, 2346, 3965
BsaHI	GRCGYC	3 cut(s)	5, 110, 688
BsaI	GGTCTC	2 cut(s)	2307, 2455
BsaWI	WCCGGW	3 cut(s)	1045, 2519, 4151
Bse118I	RCCGGY	3 cut(s)	454, 3782, 4151
Bse3DI	GCAATG	2 cut(s)	4266, 4752
Bse8I	GATNNNNATC	3 cut(s)	1784, 2346, 3965
BseAI	TCCGGA	1 cut(s)	2519
BseCI	ATCGAT	1 cut(s)	5017
BseJI	GATNNNNATC	3 cut(s)	1784, 2346, 3965
BseMI	GCAATG	2 cut(s)	4266, 4752
BseRI	GAGGAG	4 cut(s)	3714, 3717, 4419, 4856
BseSI	GKGCMC	4 cut(s)	609, 3636, 3954, 4597
BseYI	CCCAGC	6 cut(s)	168, 1955, 3731, 3866, 3908, 4209
BsgI	GTGCAG	2 cut(s)	1260, 3651
Bsh1236I	CGCG	3 cut(s)	54, 77, 685
BshNI	GGYRCC	6 cut(s)	109, 207, 606, 1661, 4592, 4954
BshTI	ACCGGT	1 cut(s)	4151
BshVI	ATCGAT	1 cut(s)	5017
BsiHKAI	GWGCWC	4 cut(s)	90, 337, 878, 4349
BsiHKCI	CYCGRG	3 cut(s)	3685, 4842, 5005
BslFI	GGGAC	6 cut(s)	203, 335, 904, 2061, 3677, 4373
BsmAI	GTCTC	6 cut(s)	541, 1266, 2307, 2455, 3795, 3937
BsmFI	GGGAC	6 cut(s)	203, 335, 904, 2061, 3677, 4373
BsmI	GAATGC	2 cut(s)	1495, 3615
Bso31I	GGTCTC	2 cut(s)	2307, 2455
BsoBI	CYCGRG	3 cut(s)	3685, 4842, 5005
Bsp119I	TTCGAA	2 cut(s)	2980, 3139
Bsp120I	GGGCCC	2 cut(s)	3632, 3950
Bsp1286I	GDGCHC	8 cut(s)	90, 337, 609, 878, 3636, 3954, 4349, 4597
Bsp13I	TCCGGA	1 cut(s)	2519
Bsp1720I	GCTNAGC	1 cut(s)	4348
Bsp19I	CCATGG	1 cut(s)	3856
BspDI	ATCGAT	1 cut(s)	5017
BspEI	TCCGGA	1 cut(s)	2519
BspFNI	CGCG	3 cut(s)	54, 77, 685
BspHI	TCATGA	2 cut(s)	265, 744
BspMAI	CTGCAG	4 cut(s)	324, 1056, 1597, 3631
BspMI	ACCTGC	3 cut(s)	1545, 3673, 4966
BspQI	GCTCTTC	1 cut(s)	825
BspT104I	TTCGAA	2 cut(s)	2980, 3139
BspT107I	GGYRCC	6 cut(s)	109, 207, 606, 1661, 4592, 4954
BspTNI	GGTCTC	2 cut(s)	2307, 2455
BsrDI	GCAATG	2 cut(s)	4266, 4752
BsrFI	RCCGGY	3 cut(s)	454, 3782, 4151
BssAI	RCCGGY	3 cut(s)	454, 3782, 4151
BssNI	GRCGYC	3 cut(s)	5, 110, 688
BssSI	CACGAG	1 cut(s)	3669
BssT1I	CCWWGG	2 cut(s)	3122, 3856
Bst2BI	CACGAG	1 cut(s)	3669
Bst6I	CTCTTC	3 cut(s)	825, 1260, 3718
BstACI	GRCGYC	3 cut(s)	5, 110, 688
BstAPI	GCANNNNNTGC	1 cut(s)	178
BstBAI	YACGTR	2 cut(s)	1346, 3947
BstBI	TTCGAA	2 cut(s)	2980, 3139
BstDSI	CCRYGG	1 cut(s)	3856
BstENI	CCTNNNNNAGG	2 cut(s)	3699, 3828
BstFNI	CGCG	3 cut(s)	54, 77, 685
BstH2I	RGCGCY	1 cut(s)	113
BstHHI	GCGC	8 cut(s)	56, 79, 112, 717, 907, 2104, 2625, 4002
BstMAI	GTCTC	6 cut(s)	541, 1266, 2307, 2455, 3795, 3937
BstNSI	RCATGY	7 cut(s)	181, 2532, 2894, 3533, 3644, 4000, 4115
BstSFI	CTRYAG	6 cut(s)	320, 1052, 1593, 3627, 3828, 4773
BstSLI	GKGCMC	4 cut(s)	609, 3636, 3954, 4597
BstUI	CGCG	3 cut(s)	54, 77, 685
BstV2I	GAAGAC	2 cut(s)	1058, 1907
BstX2I	RGATCY	7 cut(s)	637, 736, 1048, 1087, 1735, 2794, 4370
BstXI	CCANNNNNNTGG	3 cut(s)	2159, 3568, 4289
BstYI	RGATCY	7 cut(s)	637, 736, 1048, 1087, 1735, 2794, 4370
Bsu15I	ATCGAT	1 cut(s)	5017
BsuI	GTATCC	5 cut(s)	618, 2557, 3544, 3954, 4333
BsuTUI	ATCGAT	1 cut(s)	5017
BtgI	CCRYGG	1 cut(s)	3856
BtrI	CACGTC	1 cut(s)	4814
BtsI	GCAGTG	2 cut(s)	558, 3624
BtsIMutI	CAGTG	5 cut(s)	558, 2271, 2869, 3624, 3914
BveI	ACCTGC	3 cut(s)	1545, 3673, 4966
CaiI	CAGNNNCTG	3 cut(s)	2564, 2871, 4382
CciI	TCATGA	2 cut(s)	265, 744
CfoI	GCGC	8 cut(s)	56, 79, 112, 717, 907, 2104, 2625, 4002
Cfr10I	RCCGGY	3 cut(s)	454, 3782, 4151
Cfr9I	CCCGGG	1 cut(s)	3685
ClaI	ATCGAT	1 cut(s)	5017
CseI	GACGC	3 cut(s)	677, 851, 4839
CspAI	ACCGGT	1 cut(s)	4151
DinI	GGCGCC	1 cut(s)	111
DraI	TTTAAA	7 cut(s)	1473, 1620, 1702, 1714, 2671, 3355, 4296
DrdI	GACNNNNNNGTC	1 cut(s)	3447
DseDI	GACNNNNNNGTC	1 cut(s)	3447
EaeI	YGGCCR	4 cut(s)	159, 1875, 2145, 3883
Eam1104I	CTCTTC	3 cut(s)	825, 1260, 3718
EarI	CTCTTC	3 cut(s)	825, 1260, 3718
EciI	GGCGGA	2 cut(s)	28, 1953
Ecl136II	GAGCTC	2 cut(s)	88, 4347
Eco130I	CCWWGG	2 cut(s)	3122, 3856
Eco147I	AGGCCT	1 cut(s)	1566
Eco24I	GRGCYC	4 cut(s)	90, 3636, 3954, 4349
Eco31I	GGTCTC	2 cut(s)	2307, 2455
Eco47I	GGWCC	9 cut(s)	115, 217, 662, 1043, 2472, 2504, 3691, 3893, 4379
Eco53kI	GAGCTC	2 cut(s)	88, 4347
Eco88I	CYCGRG	3 cut(s)	3685, 4842, 5005
EcoICRI	GAGCTC	2 cut(s)	88, 4347
EcoNI	CCTNNNNNAGG	2 cut(s)	3699, 3828
EcoRI	GAATTC	3 cut(s)	572, 2982, 4895
EcoT14I	CCWWGG	2 cut(s)	3122, 3856
EcoT22I	ATGCAT	3 cut(s)	312, 1821, 3531
EcoT38I	GRGCYC	4 cut(s)	90, 3636, 3954, 4349
EgeI	GGCGCC	1 cut(s)	111
EheI	GGCGCC	1 cut(s)	111
ErhI	CCWWGG	2 cut(s)	3122, 3856
FalI	AAGNNNNNCTT	4 cut(s)	492, 524, 4581, 4613
FaqI	GGGAC	6 cut(s)	203, 335, 904, 2061, 3677, 4373
FauI	CCCGC	1 cut(s)	4630
FauNDI	CATATG	1 cut(s)	2972
FbaI	TGATCA	2 cut(s)	2278, 2862
FblI	GTMKAC	5 cut(s)	943, 1989, 2429, 2781, 4810
FriOI	GRGCYC	4 cut(s)	90, 3636, 3954, 4349
FspI	TGCGCA	1 cut(s)	906
GlaI	GCGC	8 cut(s)	55, 78, 111, 716, 906, 2103, 2624, 4001
GsaI	CCCAGC	6 cut(s)	172, 1959, 3735, 3870, 3912, 4213
GsuI	CTGGAG	5 cut(s)	1338, 2027, 2586, 3717, 4302
HaeII	RGCGCY	1 cut(s)	113
HgaI	GACGC	3 cut(s)	677, 851, 4839
HhaI	GCGC	8 cut(s)	56, 79, 112, 717, 907, 2104, 2625, 4002
Hin1I	GRCGYC	3 cut(s)	5, 110, 688
Hin6I	GCGC	8 cut(s)	54, 77, 110, 715, 905, 2102, 2623, 4000
HinP1I	GCGC	8 cut(s)	54, 77, 110, 715, 905, 2102, 2623, 4000
HincII	GTYRAC	5 cut(s)	3994, 4160, 4218, 4240, 4811
HindII	GTYRAC	5 cut(s)	3994, 4160, 4218, 4240, 4811
HindIII	AAGCTT	4 cut(s)	327, 671, 1510, 2132
HpaI	GTTAAC	1 cut(s)	4240
Hpy99I	CGWCG	3 cut(s)	10, 4815, 4855
HpyCH4IV	ACGT	4 cut(s)	1345, 3152, 3946, 4813
HpySE526I	ACGT	4 cut(s)	1345, 3152, 3946, 4813
Hsp92I	GRCGYC	3 cut(s)	5, 110, 688
HspAI	GCGC	8 cut(s)	54, 77, 110, 715, 905, 2102, 2623, 4000
KasI	GGCGCC	1 cut(s)	109
KflI	GGGWCCC	1 cut(s)	3691
Kpn2I	TCCGGA	1 cut(s)	2519
KpnI	GGTACC	1 cut(s)	1665
KroI	GCCGGC	1 cut(s)	454
KroNI	GCCGGC	1 cut(s)	456
Ksp22I	TGATCA	2 cut(s)	2278, 2862
KspAI	GTTAAC	1 cut(s)	4240
LguI	GCTCTTC	1 cut(s)	825
LmnI	GCTCC	7 cut(s)	10, 340, 873, 3094, 3587, 4108, 4615
MaeII	ACGT	4 cut(s)	1345, 3152, 3946, 4813
MaeIII	GTNAC	6 cut(s)	586, 799, 2713, 3203, 4796, 4935
MfeI	CAATTG	2 cut(s)	360, 4062
MflI	RGATCY	7 cut(s)	637, 736, 1048, 1087, 1735, 2794, 4370
MhlI	GDGCHC	8 cut(s)	90, 337, 609, 878, 3636, 3954, 4349, 4597
MlsI	TGGCCA	3 cut(s)	161, 1877, 2147
MluNI	TGGCCA	3 cut(s)	161, 1877, 2147
Mly113I	GGCGCC	1 cut(s)	110
MlyI	GAGTC	5 cut(s)	583, 3158, 3375, 3457, 3615
MmeI	TCCRAC	3 cut(s)	2444, 3418, 4285
Mox20I	TGGCCA	3 cut(s)	161, 1877, 2147
Mph1103I	ATGCAT	3 cut(s)	312, 1821, 3531
MroI	TCCGGA	1 cut(s)	2519
MroNI	GCCGGC	1 cut(s)	454
MroXI	GAANNNNTTC	2 cut(s)	4312, 4709
MscI	TGGCCA	3 cut(s)	161, 1877, 2147
MslI	CAYNNNNRTG	3 cut(s)	479, 1824, 2157
Msp20I	TGGCCA	3 cut(s)	161, 1877, 2147
MspA1I	CMGCKG	4 cut(s)	1496, 2353, 3653, 4213
MssI	GTTTAAAC	1 cut(s)	4296
MunI	CAATTG	2 cut(s)	360, 4062
Mva1269I	GAATGC	2 cut(s)	1495, 3615
MvnI	CGCG	3 cut(s)	54, 77, 685
NaeI	GCCGGC	1 cut(s)	456
NarI	GGCGCC	1 cut(s)	110
NciI	CCSGG	4 cut(s)	2407, 2425, 3686, 3687
NcoI	CCATGG	1 cut(s)	3856
NdeI	CATATG	1 cut(s)	2972
NgoMIV	GCCGGC	1 cut(s)	454
NmeAIII	GCCGAG	3 cut(s)	85, 1259, 3911
NmuCI	GTSAC	4 cut(s)	586, 799, 4796, 4935
NsbI	TGCGCA	1 cut(s)	906
NsiI	ATGCAT	3 cut(s)	312, 1821, 3531
NspI	RCATGY	7 cut(s)	181, 2532, 2894, 3533, 3644, 4000, 4115
NspV	TTCGAA	2 cut(s)	2980, 3139
OliI	CACNNNNGTG	1 cut(s)	479
PaeI	GCATGC	2 cut(s)	181, 2894
PaeR7I	CTCGAG	1 cut(s)	5005
PagI	TCATGA	2 cut(s)	265, 744
PaqCI	CACCTGC	1 cut(s)	4966
PasI	CCCWGGG	1 cut(s)	1378
PceI	AGGCCT	1 cut(s)	1566
PciI	ACATGT	1 cut(s)	2528
PciSI	GCTCTTC	1 cut(s)	825
PcsI	WCGNNNNNNNCGW	1 cut(s)	3667
PctI	GAATGC	2 cut(s)	1495, 3615
PdiI	GCCGGC	1 cut(s)	456
PdmI	GAANNNNTTC	2 cut(s)	4312, 4709
PflMI	CCANNNNNTGG	5 cut(s)	1097, 2564, 3214, 4049, 4382
PinAI	ACCGGT	1 cut(s)	4151
PleI	GAGTC	5 cut(s)	583, 3158, 3374, 3456, 3615
PluTI	GGCGCC	1 cut(s)	113
PmeI	GTTTAAAC	1 cut(s)	4296
PpsI	GAGTC	5 cut(s)	583, 3158, 3374, 3456, 3615
Ppu21I	YACGTR	2 cut(s)	1346, 3947
PpuMI	RGGWCCY	3 cut(s)	217, 3691, 4379
PscI	ACATGT	1 cut(s)	2528
PshBI	ATTAAT	1 cut(s)	4907
PsiI	TTATAA	1 cut(s)	3581
Psp124BI	GAGCTC	2 cut(s)	90, 4349
Psp5II	RGGWCCY	3 cut(s)	217, 3691, 4379
PspFI	CCCAGC	6 cut(s)	168, 1955, 3731, 3866, 3908, 4209
PspOMI	GGGCCC	2 cut(s)	3632, 3950
PspPPI	RGGWCCY	3 cut(s)	217, 3691, 4379
PspXI	VCTCGAGB	1 cut(s)	5005
PsrI	GAACNNNNNNTAC	2 cut(s)	991, 1023
PstI	CTGCAG	4 cut(s)	324, 1056, 1597, 3631
PstNI	CAGNNNCTG	3 cut(s)	2564, 2871, 4382
PsuI	RGATCY	7 cut(s)	637, 736, 1048, 1087, 1735, 2794, 4370
PvuII	CAGCTG	4 cut(s)	1496, 2353, 3653, 4213
RseI	CAYNNNNRTG	3 cut(s)	479, 1824, 2157
SacI	GAGCTC	2 cut(s)	90, 4349
SalI	GTCGAC	1 cut(s)	4809
SapI	GCTCTTC	1 cut(s)	825
ScaI	AGTACT	2 cut(s)	155, 4695
SchI	GAGTC	5 cut(s)	583, 3158, 3375, 3457, 3615
SduI	GDGCHC	8 cut(s)	90, 337, 609, 878, 3636, 3954, 4349, 4597
SfcI	CTRYAG	6 cut(s)	320, 1052, 1593, 3627, 3828, 4773
SfoI	GGCGCC	1 cut(s)	111
Sfr274I	CTCGAG	1 cut(s)	5005
SfuI	TTCGAA	2 cut(s)	2980, 3139
SgrAI	CRCCGGYG	1 cut(s)	4151
SinI	GGWCC	9 cut(s)	115, 217, 662, 1043, 2472, 2504, 3691, 3893, 4379
SlaI	CTCGAG	1 cut(s)	5005
SmaI	CCCGGG	1 cut(s)	3687
SmiI	ATTTAAAT	1 cut(s)	1714
SmiMI	CAYNNNNRTG	3 cut(s)	479, 1824, 2157
SmlI	CTYRAG	7 cut(s)	282, 1513, 1568, 3378, 4505, 4627, 5005
SmoI	CTYRAG	7 cut(s)	282, 1513, 1568, 3378, 4505, 4627, 5005
SpeI	ACTAGT	1 cut(s)	3764
SphI	GCATGC	2 cut(s)	181, 2894
SseBI	AGGCCT	1 cut(s)	1566
SspDI	GGCGCC	1 cut(s)	109
SspI	AATATT	3 cut(s)	1429, 2587, 5042
SstI	GAGCTC	2 cut(s)	90, 4349
StuI	AGGCCT	1 cut(s)	1566
StyI	CCWWGG	2 cut(s)	3122, 3856
SwaI	ATTTAAAT	1 cut(s)	1714
TaiI	ACGT	4 cut(s)	1348, 3155, 3949, 4816
TatI	WGTACW	6 cut(s)	153, 811, 2957, 3116, 3521, 4693
TauI	GCSGC	5 cut(s)	54, 59, 110, 688, 2918
TscAI	CASTG	5 cut(s)	558, 2271, 2876, 3631, 3921
TseFI	GTSAC	4 cut(s)	586, 799, 4796, 4935
Tsp45I	GTSAC	4 cut(s)	586, 799, 4796, 4935
TspGWI	ACGGA	4 cut(s)	729, 1011, 1728, 3979
TspMI	CCCGGG	1 cut(s)	3685
TspRI	CASTG	5 cut(s)	558, 2271, 2876, 3631, 3921
Van91I	CCANNNNNTGG	5 cut(s)	1097, 2564, 3214, 4049, 4382
VpaK11BI	GGWCC	9 cut(s)	115, 217, 662, 1043, 2472, 2504, 3691, 3893, 4379
VspI	ATTAAT	1 cut(s)	4907
XagI	CCTNNNNNAGG	2 cut(s)	3699, 3828
XceI	RCATGY	7 cut(s)	181, 2532, 2894, 3533, 3644, 4000, 4115
XcmI	CCANNNNNNNNNTGG	2 cut(s)	3863, 4127
XhoI	CTCGAG	1 cut(s)	5005
XmaI	CCCGGG	1 cut(s)	3685
XmiI	GTMKAC	5 cut(s)	943, 1989, 2429, 2781, 4810
XmnI	GAANNNNTTC	2 cut(s)	4312, 4709
ZrmI	AGTACT	2 cut(s)	155, 4695
Zsp2I	ATGCAT	3 cut(s)	312, 1821, 3531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.