mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04740 |
| fragaria_vesca | FvH4_6g02880 FvH4_6g02880 FvH4_6g02880 FvH4_6g02880 |
| malus_domestica | MD04G1224900.v1.1 MD12G1241600.v1.1 |
| prunus_persica | Prupe.6G343600_v2.0.a1 |
| pyrus_communis | pycom04g19810 pycom12g22110 |
| rosa_chinensis | RchiOBHm_Chr3g0451091 |
| rosa_laevigata | RLG00000025691 |
| rosa_multiflora | Rmu_co8423931.1_g000001 Rmu_ssc0000461.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00428560 |
| rosa_rugosa | Rorug02G0631200 Rorug02G0631300 |
| rosa_samantha | Rh3AG034200 Rh3BG034500 Rh3CG033200 Rh3DG034200 |
| rosa_wichuraiana | Rw3G002480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 362, 1902 |
| AarI | CACCTGC | 3 cut(s) | 2446, 4082, 4633 |
| AbsI | CCTCGAGG | 1 cut(s) | 1628 |
| Acc16I | TGCGCA | 1 cut(s) | 600 |
| Acc36I | ACCTGC | 5 cut(s) | 1294, 2446, 3908, 4082, 4633 |
| AccB1I | GGYRCC | 2 cut(s) | 300, 1937 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 791, 1352 |
| AccI | GTMKAC | 4 cut(s) | 13, 386, 663, 4516 |
| AccII | CGCG | 3 cut(s) | 2799, 3382, 4014 |
| AclI | AACGTT | 2 cut(s) | 915, 3492 |
| AcoI | YGGCCR | 3 cut(s) | 1093, 3598, 3809 |
| AcsI | RAATTY | 9 cut(s) | 266, 806, 891, 1528, 3892, 4042, 4312, 4497, 4601 |
| AcuI | CTGAAG | 6 cut(s) | 101, 1091, 2445, 2541, 3324, 3759 |
| AdeI | CACNNNGTG | 2 cut(s) | 131, 4088 |
| AfaI | GTAC | 9 cut(s) | 241, 449, 507, 2341, 2674, 3235, 3449, 3621, 4220 |
| AfeI | AGCGCT | 1 cut(s) | 1576 |
| AflII | CTTAAG | 1 cut(s) | 496 |
| AflIII | ACRYGT | 3 cut(s) | 1039, 4519, 5089 |
| AjiI | CACGTC | 1 cut(s) | 4520 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2749, 2781 |
| Alw21I | GWGCWC | 5 cut(s) | 31, 572, 1361, 4061, 4306 |
| Alw26I | GTCTC | 8 cut(s) | 175, 235, 1412, 1996, 2052, 2197, 3507, 5050 |
| Alw44I | GTGCAC | 1 cut(s) | 4302 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2586 |
| Ama87I | CYCGRG | 1 cut(s) | 1628 |
| Aor51HI | AGCGCT | 1 cut(s) | 1576 |
| ApaI | GGGCCC | 1 cut(s) | 3773 |
| ApaLI | GTGCAC | 1 cut(s) | 4302 |
| ApoI | RAATTY | 9 cut(s) | 266, 806, 891, 1528, 3892, 4042, 4312, 4497, 4601 |
| AseI | ATTAAT | 1 cut(s) | 4613 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 810, 2992, 4024, 4418 |
| AspLEI | GCGC | 6 cut(s) | 411, 601, 1577, 3382, 4016, 5149 |
| AsuC2I | CCSGG | 2 cut(s) | 1117, 3445 |
| AsuHPI | GGTGA | 4 cut(s) | 2084, 2726, 4074, 4667 |
| AsuII | TTCGAA | 1 cut(s) | 2332 |
| AvaI | CYCGRG | 1 cut(s) | 1628 |
| BaeGI | GKGCMC | 5 cut(s) | 303, 1029, 1940, 3773, 4306 |
| BamHI | GGATCC | 1 cut(s) | 1907 |
| BanI | GGYRCC | 2 cut(s) | 300, 1937 |
| BanII | GRGCYC | 4 cut(s) | 1361, 2635, 3773, 4061 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 498, 530, 2815, 2847 |
| BauI | CACGAG | 1 cut(s) | 4548 |
| BbsI | GAAGAC | 7 cut(s) | 107, 875, 1050, 1097, 1601, 1941, 1962 |
| Bbv12I | GWGCWC | 5 cut(s) | 31, 572, 1361, 4061, 4306 |
| BceAI | ACGGC | 2 cut(s) | 1108, 3577 |
| BciVI | GTATCC | 3 cut(s) | 312, 3669, 4045 |
| BclI | TGATCA | 1 cut(s) | 2023 |
| BcnI | CCSGG | 2 cut(s) | 1117, 3445 |
| BcoDI | GTCTC | 8 cut(s) | 175, 235, 1412, 1996, 2052, 2197, 3507, 5050 |
| BfmI | CTRYAG | 5 cut(s) | 51, 423, 1185, 1287, 3540 |
| BfoI | RGCGCY | 1 cut(s) | 1578 |
| BfrI | CTTAAG | 1 cut(s) | 496 |
| BfuAI | ACCTGC | 5 cut(s) | 1294, 2446, 3908, 4082, 4633 |
| BfuI | GTATCC | 3 cut(s) | 312, 3669, 4045 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2175 |
| BglII | AGATCT | 3 cut(s) | 742, 1583, 2141 |
| BlpI | GCTNAGC | 1 cut(s) | 2439 |
| BmeT110I | CYCGRG | 1 cut(s) | 1628 |
| BmgBI | CACGTC | 1 cut(s) | 4520 |
| BmrI | ACTGGG | 4 cut(s) | 1555, 2047, 2166, 4990 |
| BmuI | ACTGGG | 4 cut(s) | 1555, 2047, 2166, 4990 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5040 |
| BpiI | GAAGAC | 7 cut(s) | 107, 875, 1050, 1097, 1601, 1941, 1962 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4197, 4229 |
| BpmI | CTGGAG | 4 cut(s) | 926, 1721, 2301, 4014 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2042, 4060 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2439 |
| Bpu14I | TTCGAA | 1 cut(s) | 2332 |
| BpuEI | CTTGAG | 6 cut(s) | 1228, 1283, 1436, 4199, 4449, 4718 |
| BpuMI | CCSGG | 2 cut(s) | 1117, 3445 |
| BsaAI | YACGTR | 3 cut(s) | 1040, 3244, 4076 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1478, 2088, 2140, 2313 |
| BsaI | GGTCTC | 2 cut(s) | 2052, 2197 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 559, 589, 1694, 1724, 3291, 3321, 3720, 3750 |
| Bse118I | RCCGGY | 1 cut(s) | 3376 |
| Bse3DI | GCAATG | 1 cut(s) | 3585 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1478, 2088, 2140, 2313 |
| BseJI | GATNNNNATC | 4 cut(s) | 1478, 2088, 2140, 2313 |
| BseMI | GCAATG | 1 cut(s) | 3585 |
| BseRI | GAGGAG | 1 cut(s) | 4128 |
| BseSI | GKGCMC | 5 cut(s) | 303, 1029, 1940, 3773, 4306 |
| BseX3I | CGGCCG | 1 cut(s) | 1093 |
| BseYI | CCCAGC | 4 cut(s) | 3924, 4245, 4638, 4709 |
| BsgI | GTGCAG | 8 cut(s) | 308, 1701, 3936, 3957, 4110, 4667, 4875, 5151 |
| Bsh1236I | CGCG | 3 cut(s) | 2799, 3382, 4014 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1096, 3377 |
| BshNI | GGYRCC | 2 cut(s) | 300, 1937 |
| BsiEI | CGRYCG | 2 cut(s) | 1096, 3377 |
| BsiHKAI | GWGCWC | 5 cut(s) | 31, 572, 1361, 4061, 4306 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1628 |
| BsiSI | CCGG | 3 cut(s) | 1117, 3377, 3444 |
| BslFI | GGGAC | 7 cut(s) | 598, 3330, 3416, 3494, 3906, 4082, 4160 |
| BsmAI | GTCTC | 8 cut(s) | 175, 235, 1412, 1996, 2052, 2197, 3507, 5050 |
| BsmFI | GGGAC | 7 cut(s) | 598, 3330, 3416, 3494, 3906, 4082, 4160 |
| BsmI | GAATGC | 1 cut(s) | 3327 |
| Bso31I | GGTCTC | 2 cut(s) | 2052, 2197 |
| BsoBI | CYCGRG | 1 cut(s) | 1628 |
| Bsp119I | TTCGAA | 1 cut(s) | 2332 |
| Bsp120I | GGGCCC | 1 cut(s) | 3769 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2439 |
| Bsp19I | CCATGG | 1 cut(s) | 4945 |
| BspFNI | CGCG | 3 cut(s) | 2799, 3382, 4014 |
| BspHI | TCATGA | 4 cut(s) | 2302, 2317, 3156, 4053 |
| BspMAI | CTGCAG | 4 cut(s) | 55, 427, 1189, 1291 |
| BspMI | ACCTGC | 5 cut(s) | 1294, 2446, 3908, 4082, 4633 |
| BspQI | GCTCTTC | 2 cut(s) | 519, 2571 |
| BspT104I | TTCGAA | 1 cut(s) | 2332 |
| BspT107I | GGYRCC | 2 cut(s) | 300, 1937 |
| BspTI | CTTAAG | 1 cut(s) | 496 |
| BspTNI | GGTCTC | 2 cut(s) | 2052, 2197 |
| BsrDI | GCAATG | 1 cut(s) | 3585 |
| BsrFI | RCCGGY | 1 cut(s) | 3376 |
| BssAI | RCCGGY | 1 cut(s) | 3376 |
| BssNAI | GTATAC | 2 cut(s) | 387, 664 |
| BssSI | CACGAG | 1 cut(s) | 4548 |
| BssT1I | CCWWGG | 4 cut(s) | 2837, 2997, 4222, 4945 |
| Bst1107I | GTATAC | 2 cut(s) | 387, 664 |
| Bst2BI | CACGAG | 1 cut(s) | 4548 |
| Bst6I | CTCTTC | 6 cut(s) | 519, 1737, 2452, 2571, 3430, 4575 |
| BstAFI | CTTAAG | 1 cut(s) | 496 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2267, 4853 |
| BstBAI | YACGTR | 3 cut(s) | 1040, 3244, 4076 |
| BstBI | TTCGAA | 1 cut(s) | 2332 |
| BstDSI | CCRYGG | 1 cut(s) | 4945 |
| BstEII | GGTNACC | 1 cut(s) | 87 |
| BstFNI | CGCG | 3 cut(s) | 2799, 3382, 4014 |
| BstH2I | RGCGCY | 1 cut(s) | 1578 |
| BstHHI | GCGC | 6 cut(s) | 411, 601, 1577, 3382, 4016, 5149 |
| BstMAI | GTCTC | 8 cut(s) | 175, 235, 1412, 1996, 2052, 2197, 3507, 5050 |
| BstMCI | CGRYCG | 2 cut(s) | 1096, 3377 |
| BstNSI | RCATGY | 6 cut(s) | 172, 2609, 3356, 3715, 3830, 5093 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5040 |
| BstPI | GGTNACC | 1 cut(s) | 87 |
| BstSFI | CTRYAG | 5 cut(s) | 51, 423, 1185, 1287, 3540 |
| BstSLI | GKGCMC | 5 cut(s) | 303, 1029, 1940, 3773, 4306 |
| BstSNI | TACGTA | 1 cut(s) | 4076 |
| BstUI | CGCG | 3 cut(s) | 2799, 3382, 4014 |
| BstV2I | GAAGAC | 7 cut(s) | 107, 875, 1050, 1097, 1601, 1941, 1962 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1904 |
| BstZ17I | GTATAC | 2 cut(s) | 387, 664 |
| BstZI | CGGCCG | 1 cut(s) | 1093 |
| BsuI | GTATCC | 3 cut(s) | 312, 3669, 4045 |
| BtgI | CCRYGG | 1 cut(s) | 4945 |
| BtgZI | GCGATG | 3 cut(s) | 2304, 2436, 3730 |
| BtrI | CACGTC | 1 cut(s) | 4520 |
| BtsI | GCAGTG | 4 cut(s) | 245, 2372, 3336, 4458 |
| BveI | ACCTGC | 5 cut(s) | 1294, 2446, 3908, 4082, 4633 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2586 |
| CciI | TCATGA | 4 cut(s) | 2302, 2317, 3156, 4053 |
| CfoI | GCGC | 6 cut(s) | 411, 601, 1577, 3382, 4016, 5149 |
| Cfr10I | RCCGGY | 1 cut(s) | 3376 |
| CsiI | ACCWGGT | 1 cut(s) | 4084 |
| Csp6I | GTAC | 9 cut(s) | 240, 448, 506, 2340, 2673, 3234, 3448, 3620, 4219 |
| CviQI | GTAC | 9 cut(s) | 240, 448, 506, 2340, 2673, 3234, 3448, 3620, 4219 |
| DraI | TTTAAA | 2 cut(s) | 1167, 1408 |
| DraIII | CACNNNGTG | 2 cut(s) | 131, 4088 |
| EaeI | YGGCCR | 3 cut(s) | 1093, 3598, 3809 |
| EagI | CGGCCG | 1 cut(s) | 1093 |
| Eam1104I | CTCTTC | 6 cut(s) | 519, 1737, 2452, 2571, 3430, 4575 |
| EarI | CTCTTC | 6 cut(s) | 519, 1737, 2452, 2571, 3430, 4575 |
| Ecl136II | GAGCTC | 2 cut(s) | 1359, 4059 |
| EclXI | CGGCCG | 1 cut(s) | 1093 |
| Eco105I | TACGTA | 1 cut(s) | 4076 |
| Eco130I | CCWWGG | 4 cut(s) | 2837, 2997, 4222, 4945 |
| Eco147I | AGGCCT | 1 cut(s) | 1260 |
| Eco24I | GRGCYC | 4 cut(s) | 1361, 2635, 3773, 4061 |
| Eco31I | GGTCTC | 2 cut(s) | 2052, 2197 |
| Eco32I | GATATC | 2 cut(s) | 1621, 2965 |
| Eco47III | AGCGCT | 1 cut(s) | 1576 |
| Eco52I | CGGCCG | 1 cut(s) | 1093 |
| Eco53kI | GAGCTC | 2 cut(s) | 1359, 4059 |
| Eco57I | CTGAAG | 6 cut(s) | 101, 1091, 2445, 2541, 3324, 3759 |
| Eco88I | CYCGRG | 1 cut(s) | 1628 |
| Eco91I | GGTNACC | 1 cut(s) | 87 |
| EcoICRI | GAGCTC | 2 cut(s) | 1359, 4059 |
| EcoO109I | RGGNCCY | 8 cut(s) | 553, 3344, 3463, 3545, 3769, 3770, 3920, 4174 |
| EcoO65I | GGTNACC | 1 cut(s) | 87 |
| EcoRI | GAATTC | 3 cut(s) | 266, 806, 4601 |
| EcoRV | GATATC | 2 cut(s) | 1621, 2965 |
| EcoT14I | CCWWGG | 4 cut(s) | 2837, 2997, 4222, 4945 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1515 |
| EcoT38I | GRGCYC | 4 cut(s) | 1361, 2635, 3773, 4061 |
| ErhI | CCWWGG | 4 cut(s) | 2837, 2997, 4222, 4945 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1810, 1842, 2662, 2694 |
| FaqI | GGGAC | 7 cut(s) | 598, 3330, 3416, 3494, 3906, 4082, 4160 |
| FauI | CCCGC | 1 cut(s) | 3334 |
| FauNDI | CATATG | 3 cut(s) | 860, 2131, 2687 |
| FbaI | TGATCA | 1 cut(s) | 2023 |
| FblI | GTMKAC | 4 cut(s) | 13, 386, 663, 4516 |
| FriOI | GRGCYC | 4 cut(s) | 1361, 2635, 3773, 4061 |
| FspI | TGCGCA | 1 cut(s) | 600 |
| GlaI | GCGC | 6 cut(s) | 410, 600, 1576, 3381, 4015, 5148 |
| GsaI | CCCAGC | 4 cut(s) | 3928, 4249, 4642, 4713 |
| GsuI | CTGGAG | 4 cut(s) | 926, 1721, 2301, 4014 |
| HaeII | RGCGCY | 1 cut(s) | 1578 |
| HapII | CCGG | 3 cut(s) | 1117, 3377, 3444 |
| HhaI | GCGC | 6 cut(s) | 411, 601, 1577, 3382, 4016, 5149 |
| Hin6I | GCGC | 6 cut(s) | 409, 599, 1575, 3380, 4014, 5147 |
| HinP1I | GCGC | 6 cut(s) | 409, 599, 1575, 3380, 4014, 5147 |
| HincII | GTYRAC | 5 cut(s) | 1498, 2469, 3709, 3955, 4517 |
| HindII | GTYRAC | 5 cut(s) | 1498, 2469, 3709, 3955, 4517 |
| HindIII | AAGCTT | 2 cut(s) | 21, 1534 |
| HpaI | GTTAAC | 2 cut(s) | 1498, 3955 |
| HpaII | CCGG | 3 cut(s) | 1117, 3377, 3444 |
| HphI | GGTGA | 4 cut(s) | 2084, 2726, 4074, 4667 |
| Hpy99I | CGWCG | 1 cut(s) | 4521 |
| HpyCH4IV | ACGT | 6 cut(s) | 915, 1039, 3243, 3492, 4075, 4519 |
| HpySE526I | ACGT | 6 cut(s) | 915, 1039, 3243, 3492, 4075, 4519 |
| HspAI | GCGC | 6 cut(s) | 409, 599, 1575, 3380, 4014, 5147 |
| KflI | GGGWCCC | 2 cut(s) | 3344, 4174 |
| Ksp22I | TGATCA | 1 cut(s) | 2023 |
| KspAI | GTTAAC | 2 cut(s) | 1498, 3955 |
| LguI | GCTCTTC | 2 cut(s) | 519, 2571 |
| MabI | ACCWGGT | 1 cut(s) | 4084 |
| MaeII | ACGT | 6 cut(s) | 915, 1039, 3243, 3492, 4075, 4519 |
| MaeIII | GTNAC | 8 cut(s) | 87, 977, 1925, 2209, 2248, 3741, 4502, 5042 |
| MfeI | CAATTG | 1 cut(s) | 1644 |
| MlyI | GAGTC | 6 cut(s) | 1414, 2235, 2292, 2873, 3147, 4471 |
| MmeI | TCCRAC | 4 cut(s) | 2719, 3760, 4478, 4505 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1515 |
| MroXI | GAANNNNTTC | 4 cut(s) | 810, 2992, 4024, 4418 |
| MslI | CAYNNNNRTG | 5 cut(s) | 173, 709, 1518, 1902, 4839 |
| MspA1I | CMGCKG | 5 cut(s) | 85, 382, 3365, 3928, 4249 |
| MspCI | CTTAAG | 1 cut(s) | 496 |
| MspI | CCGG | 3 cut(s) | 1117, 3377, 3444 |
| MunI | CAATTG | 1 cut(s) | 1644 |
| Mva1269I | GAATGC | 1 cut(s) | 3327 |
| MvnI | CGCG | 3 cut(s) | 2799, 3382, 4014 |
| NciI | CCSGG | 2 cut(s) | 1117, 3445 |
| NcoI | CCATGG | 1 cut(s) | 4945 |
| NdeI | CATATG | 3 cut(s) | 860, 2131, 2687 |
| NmeAIII | GCCGAG | 1 cut(s) | 3626 |
| NmuCI | GTSAC | 3 cut(s) | 977, 4502, 5042 |
| NsbI | TGCGCA | 1 cut(s) | 600 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1515 |
| NspI | RCATGY | 6 cut(s) | 172, 2609, 3356, 3715, 3830, 5093 |
| NspV | TTCGAA | 1 cut(s) | 2332 |
| PaeI | GCATGC | 1 cut(s) | 2609 |
| PaeR7I | CTCGAG | 1 cut(s) | 1628 |
| PagI | TCATGA | 4 cut(s) | 2302, 2317, 3156, 4053 |
| PaqCI | CACCTGC | 3 cut(s) | 2446, 4082, 4633 |
| PasI | CCCWGGG | 1 cut(s) | 3460 |
| PceI | AGGCCT | 1 cut(s) | 1260 |
| PciI | ACATGT | 1 cut(s) | 5089 |
| PciSI | GCTCTTC | 2 cut(s) | 519, 2571 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3379 |
| PctI | GAATGC | 1 cut(s) | 3327 |
| PdmI | GAANNNNTTC | 4 cut(s) | 810, 2992, 4024, 4418 |
| PflFI | GACNNNGTC | 1 cut(s) | 491 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 791, 1352 |
| PfoI | TCCNGGA | 2 cut(s) | 733, 1115 |
| PleI | GAGTC | 6 cut(s) | 1414, 2234, 2291, 2873, 3147, 4471 |
| PpsI | GAGTC | 6 cut(s) | 1414, 2234, 2291, 2873, 3147, 4471 |
| Ppu21I | YACGTR | 3 cut(s) | 1040, 3244, 4076 |
| PpuMI | RGGWCCY | 5 cut(s) | 553, 3344, 3545, 3920, 4174 |
| PscI | ACATGT | 1 cut(s) | 5089 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5040 |
| PshBI | ATTAAT | 1 cut(s) | 4613 |
| PsiI | TTATAA | 2 cut(s) | 362, 1902 |
| Psp124BI | GAGCTC | 2 cut(s) | 1361, 4061 |
| Psp1406I | AACGTT | 2 cut(s) | 915, 3492 |
| Psp5II | RGGWCCY | 5 cut(s) | 553, 3344, 3545, 3920, 4174 |
| PspEI | GGTNACC | 1 cut(s) | 87 |
| PspFI | CCCAGC | 4 cut(s) | 3924, 4245, 4638, 4709 |
| PspOMI | GGGCCC | 1 cut(s) | 3769 |
| PspPPI | RGGWCCY | 5 cut(s) | 553, 3344, 3545, 3920, 4174 |
| PspXI | VCTCGAGB | 1 cut(s) | 1628 |
| PstI | CTGCAG | 4 cut(s) | 55, 427, 1189, 1291 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2586 |
| PsyI | GACNNNGTC | 1 cut(s) | 491 |
| PvuII | CAGCTG | 3 cut(s) | 3365, 3928, 4249 |
| RsaI | GTAC | 9 cut(s) | 241, 449, 507, 2341, 2674, 3235, 3449, 3621, 4220 |
| RsaNI | GTAC | 9 cut(s) | 240, 448, 506, 2340, 2673, 3234, 3448, 3620, 4219 |
| RseI | CAYNNNNRTG | 5 cut(s) | 173, 709, 1518, 1902, 4839 |
| SacI | GAGCTC | 2 cut(s) | 1361, 4061 |
| SalI | GTCGAC | 1 cut(s) | 4515 |
| SapI | GCTCTTC | 2 cut(s) | 519, 2571 |
| SchI | GAGTC | 6 cut(s) | 1414, 2235, 2292, 2873, 3147, 4471 |
| SexAI | ACCWGGT | 1 cut(s) | 4084 |
| SfcI | CTRYAG | 5 cut(s) | 51, 423, 1185, 1287, 3540 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 2175 |
| Sfr274I | CTCGAG | 1 cut(s) | 1628 |
| SfuI | TTCGAA | 1 cut(s) | 2332 |
| SlaI | CTCGAG | 1 cut(s) | 1628 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 173, 709, 1518, 1902, 4839 |
| SmlI | CTYRAG | 8 cut(s) | 496, 1207, 1262, 1415, 1628, 4214, 4464, 4697 |
| SmoI | CTYRAG | 8 cut(s) | 496, 1207, 1262, 1415, 1628, 4214, 4464, 4697 |
| SnaBI | TACGTA | 1 cut(s) | 4076 |
| SphI | GCATGC | 1 cut(s) | 2609 |
| SseBI | AGGCCT | 1 cut(s) | 1260 |
| SspI | AATATT | 1 cut(s) | 1123 |
| SstI | GAGCTC | 2 cut(s) | 1361, 4061 |
| StuI | AGGCCT | 1 cut(s) | 1260 |
| StyI | CCWWGG | 4 cut(s) | 2837, 2997, 4222, 4945 |
| TaiI | ACGT | 6 cut(s) | 918, 1042, 3246, 3495, 4078, 4522 |
| TatI | WGTACW | 4 cut(s) | 447, 505, 2672, 3233 |
| TauI | GCSGC | 2 cut(s) | 1098, 4847 |
| TseFI | GTSAC | 3 cut(s) | 977, 4502, 5042 |
| Tsp45I | GTSAC | 3 cut(s) | 977, 4502, 5042 |
| TspGWI | ACGGA | 7 cut(s) | 36, 705, 1492, 1631, 2486, 3312, 5061 |
| Tth111I | GACNNNGTC | 1 cut(s) | 491 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 791, 1352 |
| Vha464I | CTTAAG | 1 cut(s) | 496 |
| VneI | GTGCAC | 1 cut(s) | 4302 |
| VspI | ATTAAT | 1 cut(s) | 4613 |
| XapI | RAATTY | 9 cut(s) | 266, 806, 891, 1528, 3892, 4042, 4312, 4497, 4601 |
| XceI | RCATGY | 6 cut(s) | 172, 2609, 3356, 3715, 3830, 5093 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1830, 3842 |
| XhoI | CTCGAG | 1 cut(s) | 1628 |
| XmiI | GTMKAC | 4 cut(s) | 13, 386, 663, 4516 |
| XmnI | GAANNNNTTC | 4 cut(s) | 810, 2992, 4024, 4418 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1515 |