Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Reverse (-)

3116289 .. 3119685

Gene Structure 3397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGCGGCGGCGGTATCGGGTCCGGTGGCTCAACCAGTGTCTCCGGCCGCTCAACAGGCGCCGCCGGTTGCGGCTCCGGCGGTTTATGGGAACGTGTCGCTGTACGTAGGCGATCGGGACCCGAGTGTGAACGAAGCGCAGCTGTACGATCTGTTCAACCAAATGGGGCAGATCGTTTCGATTCGGGTCTGTCGGGATCAGAACCGCATGCACTCCCTCGGCTATGCCTACGTTAATTACATCGATCCTCAACACGCTGCTAATGCCCTGGAAGTGTTGAATTTTACTCCAATCAATGGGAAACCCATTAGGATTATGTACTCTCATCGAGATCCAAGCATTCGGAAGAGCGGAAAGGCCAATGTATTCATTAAGAACCTGGACAAAAGTATTGATCATAAGGCGTTATTGGACACTTTTTCAACCTTTGGCAACGTTCTTTCTTGCAAGGTTGCACTTGATAGCAGCGGTCAATCGAAAGGCTATGGGTTCGTACAGTTTGACAATGAGGAATCTGCACAGGAGGCAATCAAGAAGCTGAATAAAATGCTGATAAATGGAAAACTGGTTTATGTAGGACTTTTTCAACGAGGCCAGGAGAGGAATCAGCCAAATGGATCACCACATTTCACTAATGTTTATGTGAAAAATTTGTCGGAGACAACTACAGATGAAGACCTTAAGAAAATTATGGGCGAGCATGGTAACATTACTAGTGCGGTTGTTATGAGGGATGGTTCTGGAAAGTCTAGATGTTTTGGTTTTGTTAACTTTGAGAAGCCAGAAGCAGCAGCTGCTGCAATTGAGAAGTTGAATGGGAGCACCAGTAGTGGTGACAAGGTTTTATTTGTTGGGAGGGCTCAAAGGAAATCCGAGAGGGAGGCGGAGTTGAGAGCTAAGTTTGAACAGGAAAGACTCAGTAGATTTGAGAAGCTACAAGGTGCTAATTTATATCTCAAAAATCTAGATGACACAATAAATGATGAAAAACTAAAGGAGCTATTTTCTGAATTTGGAACAATAACATCGTGCAAGGTCATGCTTGATCAGCAAGGGGTGAGCAAGGGTTCTGGATTTGTTGCATTTTCTACTCCAGAGGAAGCCAATAAAGCCTTGGCTGAAATGAATGGCAAGATGATTGGACGAAAGCCTCTGTATGTCGCTGTGGCCCAACGCAAAGAAGAGCGAAAGGCTCGATTACAGGCACGCTTTGCCCAAATCCGAGCACCAGGTGGAATGATGCCATCAGGACTTCCTGGTTATCATGCTGGGGCACCTAGACTTGCCCCTCAACAATTGTATTATGGTCAAGGTTCTCCTGGCCTTCTACCCCGACAGCCTGCTGGTTATGGCTTCCAGCAGCAGCTCTTGCCTGGCATGCGCCCGGGTATTGGTCCAAACTTCATTATGCCATACCACCTTCAGAGGCAAGGTCAACCTGGGCAGCGAATGGGCGCACGTCGAGGTGGGAACCTCCAACATGCGCAGCAGCAGCAGCAGCAGTTACTGCACCGTCACTCCAATCAAGGCTTGAGATACATGGGAAATGCGCGGAATGGAGTGGACCCATCTTTGGCTCCTCAAGGTCTTGTGGGTCCAATGATGCCTTTGCCACTTGACGGTGCAGGGCTGCCTGTGACTCGTAATGATATCCATCGTTCTGGGCCGTTGCCAATGTCAACACTTGCTTCAGCTTTAGCTTCTGCTACCCCAGAGAATCAGCGTTTGCGCATTGAGCCTGAACACACGGCTAAGGTGACTGGGATGTTGCTAGAGATGGATCAGACGGAGGTTCTCCATCTGATTGAGTCTCCAGATGCCTTGAAAGCCAAGGTAGCTGAGGCAATGGATGTTCTGGATAAAGCTGCAACGAAGTCTGAAGTTACTGATGAGCTTGGTGCATTGGATCTGAATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

640

Amino Acids

69.82

Weight (kDa)

9.14

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	34 - 104	6.9e-15	RNA recognition motif
RRM_1	PF00076	122 - 190	1.2e-20	RNA recognition motif
RRM_1	PF00076	213 - 278	4.4e-20	RNA recognition motif
RRM_1	PF00076	317 - 385	7.2e-21	RNA recognition motif
MLLE	PF00658	577 - 619	2.1e-16	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1485, 1730
AccB1I	GGYRCC	2 cut(s)	58, 1273
AccB7I	CCANNNNNTGG	1 cut(s)	296
AccBSI	CCGCTC	2 cut(s)	50, 351
AccII	CGCG	1 cut(s)	1552
AclI	AACGTT	1 cut(s)	435
AclWI	GGATC	6 cut(s)	204, 239, 326, 625, 1788, 1914
AcoI	YGGCCR	1 cut(s)	45
AcsI	RAATTY	3 cut(s)	280, 649, 1010
AcuI	CTGAAG	3 cut(s)	1406, 1674, 1899
AcyI	GRCGYC	1 cut(s)	59
AdeI	CACNNNGTG	1 cut(s)	1232
AfaI	GTAC	4 cut(s)	104, 146, 320, 495
AfiI	CCNNNNNNNGG	4 cut(s)	296, 1391, 1573, 1619
AflII	CTTAAG	1 cut(s)	680
AflIII	ACRYGT	1 cut(s)	93
AgsI	TTSAA	7 cut(s)	157, 280, 423, 587, 814, 905, 1825
AhlI	ACTAGT	1 cut(s)	713
AjiI	CACGTC	1 cut(s)	1460
AjnI	CCWGG	8 cut(s)	267, 378, 594, 1228, 1255, 1318, 1372, 1438
Alw21I	GWGCWC	2 cut(s)	824, 1228
Alw26I	GTCTC	3 cut(s)	45, 653, 1815
AlwI	GGATC	6 cut(s)	204, 239, 326, 625, 1788, 1914
AlwNI	CAGNNNCTG	3 cut(s)	794, 797, 1507
Ama87I	CYCGRG	2 cut(s)	121, 1384
AoxI	GGCC	6 cut(s)	45, 357, 592, 1167, 1321, 1664
ApoI	RAATTY	3 cut(s)	280, 649, 1010
AspLEI	GCGC	7 cut(s)	61, 139, 1383, 1457, 1486, 1552, 1731
AspS9I	GGNCC	7 cut(s)	20, 118, 1168, 1394, 1564, 1595, 1664
AsuC2I	CCSGG	2 cut(s)	1385, 1386
AsuHPI	GGTGA	4 cut(s)	612, 845, 1069, 1768
AvaI	CYCGRG	2 cut(s)	121, 1384
AvaII	GGWCC	5 cut(s)	20, 118, 1394, 1564, 1595
BaeGI	GKGCMC	1 cut(s)	1276
BanI	GGYRCC	2 cut(s)	58, 1273
BanII	GRGCYC	1 cut(s)	862
BbsI	GAAGAC	1 cut(s)	681
Bbv12I	GWGCWC	2 cut(s)	824, 1228
BbvCI	CCTCAGC	1 cut(s)	1839
BccI	CCATC	6 cut(s)	728, 1252, 1576, 1662, 1771, 1806
BceAI	ACGGC	2 cut(s)	1651, 1764
BciT130I	CCWGG	8 cut(s)	269, 380, 596, 1230, 1257, 1320, 1374, 1440
BclI	TGATCA	2 cut(s)	394, 1045
BcnI	CCSGG	2 cut(s)	1385, 1386
BcoDI	GTCTC	3 cut(s)	45, 653, 1815
BcuI	ACTAGT	1 cut(s)	713
BfaI	CTAG	5 cut(s)	714, 750, 965, 1278, 1772
BfmI	CTRYAG	1 cut(s)	666
BfoI	RGCGCY	1 cut(s)	62
BfrI	CTTAAG	1 cut(s)	680
Bme18I	GGWCC	5 cut(s)	20, 118, 1394, 1564, 1595
BmeT110I	CYCGRG	2 cut(s)	121, 1384
BmgBI	CACGTC	1 cut(s)	1460
BmgT120I	GGNCC	7 cut(s)	20, 118, 1168, 1394, 1564, 1595, 1664
BmrI	ACTGGG	1 cut(s)	1770
BmsI	GCATC	3 cut(s)	1230, 1593, 1807
BmuI	ACTGGG	1 cut(s)	1770
BpiI	GAAGAC	1 cut(s)	681
BpmI	CTGGAG	2 cut(s)	1077, 1797
Bpu10I	CCTNAGC	2 cut(s)	1752, 1839
BpuEI	CTTGAG	2 cut(s)	1552, 1566
BpuMI	CCSGG	2 cut(s)	1385, 1386
Bsa29I	ATCGAT	1 cut(s)	243
BsaAI	YACGTR	1 cut(s)	106
BsaBI	GATNNNNATC	1 cut(s)	1653
BsaHI	GRCGYC	1 cut(s)	59
BsaJI	CCNNGG	6 cut(s)	217, 267, 1113, 1384, 1439, 1830
BsaWI	WCCGGW	1 cut(s)	22
BsaXI	ACNNNNNCTCC	6 cut(s)	811, 841, 872, 902, 1502, 1532
Bsc4I	CCNNNNNNNGG	4 cut(s)	296, 1391, 1573, 1619
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	4 cut(s)	35, 570, 825, 1765
Bse3DI	GCAATG	1 cut(s)	1851
Bse8I	GATNNNNATC	1 cut(s)	1653
BseBI	CCWGG	8 cut(s)	269, 380, 596, 1230, 1257, 1320, 1374, 1440
BseCI	ATCGAT	1 cut(s)	243
BseDI	CCNNGG	6 cut(s)	217, 267, 1113, 1384, 1439, 1830
BseGI	GGATG	3 cut(s)	739, 1770, 1855
BseJI	GATNNNNATC	1 cut(s)	1653
BseLI	CCNNNNNNNGG	4 cut(s)	296, 1391, 1573, 1619
BseMI	GCAATG	1 cut(s)	1851
BseMII	CTCAG	2 cut(s)	931, 1830
BseNI	ACTGG	4 cut(s)	35, 570, 825, 1765
BseRI	GAGGAG	1 cut(s)	1569
BseSI	GKGCMC	1 cut(s)	1276
BseX3I	CGGCCG	1 cut(s)	45
BseYI	CCCAGC	1 cut(s)	1268
BsgI	GTGCAG	3 cut(s)	501, 1493, 1644
Bsh1236I	CGCG	1 cut(s)	1552
Bsh1285I	CGRYCG	2 cut(s)	48, 115
BshFI	GGCC	6 cut(s)	47, 359, 594, 1169, 1323, 1666
BshNI	GGYRCC	2 cut(s)	58, 1273
BshVI	ATCGAT	1 cut(s)	243
BsiEI	CGRYCG	2 cut(s)	48, 115
BsiHKAI	GWGCWC	2 cut(s)	824, 1228
BsiHKCI	CYCGRG	2 cut(s)	121, 1384
BsiSI	CCGG	5 cut(s)	23, 44, 65, 77, 1385
BslFI	GGGAC	1 cut(s)	131
BslI	CCNNNNNNNGG	4 cut(s)	296, 1391, 1573, 1619
BsmAI	GTCTC	3 cut(s)	45, 653, 1815
BsmFI	GGGAC	1 cut(s)	131
BsmI	GAATGC	1 cut(s)	339
BsnI	GGCC	6 cut(s)	47, 359, 594, 1169, 1323, 1666
BsoBI	CYCGRG	2 cut(s)	121, 1384
Bsp1286I	GDGCHC	4 cut(s)	824, 862, 1228, 1276
BspANI	GGCC	6 cut(s)	47, 359, 594, 1169, 1323, 1666
BspCNI	CTCAG	2 cut(s)	930, 1831
BspDI	ATCGAT	1 cut(s)	243
BspFNI	CGCG	1 cut(s)	1552
BspPI	GGATC	6 cut(s)	204, 239, 326, 625, 1788, 1914
BspQI	GCTCTTC	2 cut(s)	341, 1176
BspT107I	GGYRCC	2 cut(s)	58, 1273
BspTI	CTTAAG	1 cut(s)	680
BsrBI	CCGCTC	2 cut(s)	50, 351
BsrDI	GCAATG	1 cut(s)	1851
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	4 cut(s)	35, 570, 825, 1765
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	6 cut(s)	217, 267, 1113, 1384, 1439, 1830
BssNI	GRCGYC	1 cut(s)	59
BssT1I	CCWWGG	2 cut(s)	1113, 1830
Bst2UI	CCWGG	8 cut(s)	269, 380, 596, 1230, 1257, 1320, 1374, 1440
Bst4CI	ACNGT	3 cut(s)	498, 1514, 1622
Bst6I	CTCTTC	2 cut(s)	341, 1176
BstACI	GRCGYC	1 cut(s)	59
BstAFI	CTTAAG	1 cut(s)	680
BstAPI	GCANNNNNTGC	5 cut(s)	794, 797, 1211, 1369, 1507
BstBAI	YACGTR	1 cut(s)	106
BstC8I	GCNNGC	5 cut(s)	209, 698, 1207, 1341, 1379
BstDEI	CTNAG	4 cut(s)	897, 917, 1752, 1839
BstF5I	GGATG	3 cut(s)	739, 1770, 1855
BstFNI	CGCG	1 cut(s)	1552
BstH2I	RGCGCY	1 cut(s)	62
BstHHI	GCGC	7 cut(s)	61, 139, 1383, 1457, 1486, 1552, 1731
BstMAI	GTCTC	3 cut(s)	45, 653, 1815
BstMCI	CGRYCG	2 cut(s)	48, 115
BstNI	CCWGG	8 cut(s)	269, 380, 596, 1230, 1257, 1320, 1374, 1440
BstNSI	RCATGY	3 cut(s)	211, 1381, 1484
BstSFI	CTRYAG	1 cut(s)	666
BstSLI	GKGCMC	1 cut(s)	1276
BstSNI	TACGTA	1 cut(s)	106
BstUI	CGCG	1 cut(s)	1552
BstV2I	GAAGAC	1 cut(s)	681
BstX2I	RGATCY	2 cut(s)	331, 1906
BstXI	CCANNNNNNTGG	1 cut(s)	1661
BstYI	RGATCY	2 cut(s)	331, 1906
BstZI	CGGCCG	1 cut(s)	45
Bsu15I	ATCGAT	1 cut(s)	243
BsuRI	GGCC	6 cut(s)	47, 359, 594, 1169, 1323, 1666
BsuTUI	ATCGAT	1 cut(s)	243
BtrI	CACGTC	1 cut(s)	1460
BtsCI	GGATG	3 cut(s)	739, 1770, 1855
BtsIMutI	CAGTG	1 cut(s)	42
Cac8I	GCNNGC	5 cut(s)	209, 698, 1207, 1341, 1379
CaiI	CAGNNNCTG	3 cut(s)	794, 797, 1507
CfoI	GCGC	7 cut(s)	61, 139, 1383, 1457, 1486, 1552, 1731
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	7 cut(s)	20, 118, 1168, 1394, 1564, 1595, 1664
Cfr9I	CCCGGG	1 cut(s)	1384
ClaI	ATCGAT	1 cut(s)	243
CsiI	ACCWGGT	1 cut(s)	1228
Csp6I	GTAC	4 cut(s)	103, 145, 319, 494
CviAII	CATG	7 cut(s)	208, 701, 1039, 1265, 1378, 1481, 1540
CviQI	GTAC	4 cut(s)	103, 145, 319, 494
DdeI	CTNAG	4 cut(s)	897, 917, 1752, 1839
DinI	GGCGCC	1 cut(s)	60
DraIII	CACNNNGTG	1 cut(s)	1232
EaeI	YGGCCR	1 cut(s)	45
EagI	CGGCCG	1 cut(s)	45
Eam1104I	CTCTTC	2 cut(s)	341, 1176
EarI	CTCTTC	2 cut(s)	341, 1176
EciI	GGCGGA	1 cut(s)	899
EclXI	CGGCCG	1 cut(s)	45
Eco105I	TACGTA	1 cut(s)	106
Eco130I	CCWWGG	2 cut(s)	1113, 1830
Eco24I	GRGCYC	1 cut(s)	862
Eco32I	GATATC	1 cut(s)	1651
Eco47I	GGWCC	5 cut(s)	20, 118, 1394, 1564, 1595
Eco52I	CGGCCG	1 cut(s)	45
Eco57I	CTGAAG	3 cut(s)	1406, 1674, 1899
Eco88I	CYCGRG	2 cut(s)	121, 1384
EcoO109I	RGGNCCY	1 cut(s)	118
EcoRII	CCWGG	8 cut(s)	267, 378, 594, 1228, 1255, 1318, 1372, 1438
EcoRV	GATATC	1 cut(s)	1651
EcoT14I	CCWWGG	2 cut(s)	1113, 1830
EcoT38I	GRGCYC	1 cut(s)	862
EgeI	GGCGCC	1 cut(s)	60
EheI	GGCGCC	1 cut(s)	60
ErhI	CCWWGG	2 cut(s)	1113, 1830
FaeI	CATG	7 cut(s)	211, 704, 1042, 1268, 1381, 1484, 1543
FaqI	GGGAC	1 cut(s)	131
FatI	CATG	7 cut(s)	207, 700, 1038, 1264, 1377, 1480, 1539
FbaI	TGATCA	2 cut(s)	394, 1045
FokI	GGATG	3 cut(s)	746, 1777, 1862
FriOI	GRGCYC	1 cut(s)	862
FspBI	CTAG	5 cut(s)	714, 750, 965, 1278, 1772
FspI	TGCGCA	2 cut(s)	1485, 1730
GlaI	GCGC	7 cut(s)	60, 138, 1382, 1456, 1485, 1551, 1730
GsaI	CCCAGC	1 cut(s)	1272
GsuI	CTGGAG	2 cut(s)	1077, 1797
HaeII	RGCGCY	1 cut(s)	62
HaeIII	GGCC	6 cut(s)	47, 359, 594, 1169, 1323, 1666
HapII	CCGG	5 cut(s)	23, 44, 65, 77, 1385
HhaI	GCGC	7 cut(s)	61, 139, 1383, 1457, 1486, 1552, 1731
Hin1I	GRCGYC	1 cut(s)	59
Hin1II	CATG	7 cut(s)	211, 704, 1042, 1268, 1381, 1484, 1543
Hin6I	GCGC	7 cut(s)	59, 137, 1381, 1455, 1484, 1550, 1729
HinP1I	GCGC	7 cut(s)	59, 137, 1381, 1455, 1484, 1550, 1729
HincII	GTYRAC	3 cut(s)	769, 1436, 1680
HindII	GTYRAC	3 cut(s)	769, 1436, 1680
HinfI	GANTC	7 cut(s)	181, 512, 604, 915, 1639, 1717, 1808
HpaI	GTTAAC	1 cut(s)	769
HpaII	CCGG	5 cut(s)	23, 44, 65, 77, 1385
HphI	GGTGA	4 cut(s)	612, 845, 1069, 1768
Hpy166II	GTNNAC	5 cut(s)	130, 769, 1436, 1564, 1680
Hpy8I	GTNNAC	5 cut(s)	130, 769, 1436, 1564, 1680
Hpy99I	CGWCG	1 cut(s)	1464
HpyAV	CCTTC	2 cut(s)	1334, 1430
HpyCH4III	ACNGT	3 cut(s)	498, 1514, 1622
HpyCH4IV	ACGT	5 cut(s)	93, 105, 231, 435, 1459
HpyF3I	CTNAG	4 cut(s)	897, 917, 1752, 1839
HpySE526I	ACGT	5 cut(s)	93, 105, 231, 435, 1459
Hsp92I	GRCGYC	1 cut(s)	59
Hsp92II	CATG	7 cut(s)	211, 704, 1042, 1268, 1381, 1484, 1543
HspAI	GCGC	7 cut(s)	59, 137, 1381, 1455, 1484, 1550, 1729
KasI	GGCGCC	1 cut(s)	58
KflI	GGGWCCC	1 cut(s)	118
Ksp22I	TGATCA	2 cut(s)	394, 1045
KspAI	GTTAAC	1 cut(s)	769
LguI	GCTCTTC	2 cut(s)	341, 1176
LmnI	GCTCC	4 cut(s)	79, 819, 997, 1582
LweI	GCATC	3 cut(s)	1230, 1593, 1807
MabI	ACCWGGT	1 cut(s)	1228
MaeI	CTAG	5 cut(s)	714, 750, 965, 1278, 1772
MaeII	ACGT	5 cut(s)	93, 105, 231, 435, 1459
MaeIII	GTNAC	7 cut(s)	704, 833, 1503, 1514, 1636, 1756, 1882
MbiI	CCGCTC	2 cut(s)	50, 351
MboII	GAAGA	3 cut(s)	358, 686, 1193
MfeI	CAATTG	2 cut(s)	801, 1295
MflI	RGATCY	2 cut(s)	331, 1906
MhlI	GDGCHC	4 cut(s)	824, 862, 1228, 1276
MluCI	AATT	8 cut(s)	235, 280, 649, 687, 801, 946, 1010, 1295
Mly113I	GGCGCC	1 cut(s)	59
MlyI	GAGTC	3 cut(s)	909, 1633, 1817
MmeI	TCCRAC	2 cut(s)	636, 1501
MseI	TTAA	4 cut(s)	234, 372, 681, 768
MspA1I	CMGCKG	3 cut(s)	142, 468, 794
MspCI	CTTAAG	1 cut(s)	680
MspI	CCGG	5 cut(s)	23, 44, 65, 77, 1385
MunI	CAATTG	2 cut(s)	801, 1295
Mva1269I	GAATGC	1 cut(s)	339
MvaI	CCWGG	8 cut(s)	269, 380, 596, 1230, 1257, 1320, 1374, 1440
MvnI	CGCG	1 cut(s)	1552
NarI	GGCGCC	1 cut(s)	59
NciI	CCSGG	2 cut(s)	1385, 1386
NlaIII	CATG	7 cut(s)	211, 704, 1042, 1268, 1381, 1484, 1543
NmeAIII	GCCGAG	1 cut(s)	198
NmuCI	GTSAC	4 cut(s)	833, 1514, 1636, 1756
NsbI	TGCGCA	2 cut(s)	1485, 1730
NspI	RCATGY	3 cut(s)	211, 1381, 1484
PaeI	GCATGC	2 cut(s)	211, 1381
PciSI	GCTCTTC	2 cut(s)	341, 1176
PctI	GAATGC	1 cut(s)	339
PfeI	GAWTC	4 cut(s)	181, 512, 604, 1717
PflMI	CCANNNNNTGG	1 cut(s)	296
Ple19I	CGATCG	1 cut(s)	115
PleI	GAGTC	3 cut(s)	909, 1633, 1816
PluTI	GGCGCC	1 cut(s)	62
PpsI	GAGTC	3 cut(s)	909, 1633, 1816
Ppu21I	YACGTR	1 cut(s)	106
PpuMI	RGGWCCY	1 cut(s)	118
Psp1406I	AACGTT	1 cut(s)	435
Psp5II	RGGWCCY	1 cut(s)	118
Psp6I	CCWGG	8 cut(s)	267, 378, 594, 1228, 1255, 1318, 1372, 1438
PspFI	CCCAGC	1 cut(s)	1268
PspGI	CCWGG	8 cut(s)	267, 378, 594, 1228, 1255, 1318, 1372, 1438
PspPI	GGNCC	7 cut(s)	20, 118, 1168, 1394, 1564, 1595, 1664
PspPPI	RGGWCCY	1 cut(s)	118
PsrI	GAACNNNNNNTAC	2 cut(s)	137, 169
PstNI	CAGNNNCTG	3 cut(s)	794, 797, 1507
PsuI	RGATCY	2 cut(s)	331, 1906
PvuI	CGATCG	1 cut(s)	115
PvuII	CAGCTG	2 cut(s)	142, 794
RsaI	GTAC	4 cut(s)	104, 146, 320, 495
RsaNI	GTAC	4 cut(s)	103, 145, 319, 494
SapI	GCTCTTC	2 cut(s)	341, 1176
SaqAI	TTAA	4 cut(s)	234, 372, 681, 768
Sau96I	GGNCC	7 cut(s)	20, 118, 1168, 1394, 1564, 1595, 1664
SchI	GAGTC	3 cut(s)	909, 1633, 1817
SduI	GDGCHC	4 cut(s)	824, 862, 1228, 1276
SexAI	ACCWGGT	1 cut(s)	1228
SfaNI	GCATC	3 cut(s)	1230, 1593, 1807
SfcI	CTRYAG	1 cut(s)	666
SfoI	GGCGCC	1 cut(s)	60
SinI	GGWCC	5 cut(s)	20, 118, 1394, 1564, 1595
SmaI	CCCGGG	1 cut(s)	1386
SmlI	CTYRAG	3 cut(s)	680, 1531, 1581
SmoI	CTYRAG	3 cut(s)	680, 1531, 1581
SnaBI	TACGTA	1 cut(s)	106
SpeI	ACTAGT	1 cut(s)	713
SphI	GCATGC	2 cut(s)	211, 1381
Sse9I	AATT	8 cut(s)	235, 280, 649, 687, 801, 946, 1010, 1295
SspDI	GGCGCC	1 cut(s)	58
SspMI	CTAG	5 cut(s)	714, 750, 965, 1278, 1772
StyI	CCWWGG	2 cut(s)	1113, 1830
TaaI	ACNGT	3 cut(s)	498, 1514, 1622
TaiI	ACGT	5 cut(s)	96, 108, 234, 438, 1462
TaqI	TCGA	6 cut(s)	179, 243, 328, 476, 1195, 1462
TasI	AATT	8 cut(s)	235, 280, 649, 687, 801, 946, 1010, 1295
TatI	WGTACW	1 cut(s)	318
TauI	GCSGC	5 cut(s)	8, 11, 50, 64, 74
TfiI	GAWTC	4 cut(s)	181, 512, 604, 1717
Tru1I	TTAA	4 cut(s)	234, 372, 681, 768
Tru9I	TTAA	4 cut(s)	234, 372, 681, 768
TscAI	CASTG	1 cut(s)	42
TseFI	GTSAC	4 cut(s)	833, 1514, 1636, 1756
Tsp45I	GTSAC	4 cut(s)	833, 1514, 1636, 1756
TspDTI	ATGAA	5 cut(s)	358, 687, 999, 1139, 1393
TspGWI	ACGGA	1 cut(s)	1802
TspMI	CCCGGG	1 cut(s)	1384
TspRI	CASTG	1 cut(s)	42
Van91I	CCANNNNNTGG	1 cut(s)	296
Vha464I	CTTAAG	1 cut(s)	680
VpaK11BI	GGWCC	5 cut(s)	20, 118, 1394, 1564, 1595
XapI	RAATTY	3 cut(s)	280, 649, 1010
XbaI	TCTAGA	2 cut(s)	749, 964
XceI	RCATGY	3 cut(s)	211, 1381, 1484
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1111
XmaI	CCCGGG	1 cut(s)	1384
XspI	CTAG	5 cut(s)	714, 750, 965, 1278, 1772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.