pycom05g03220

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
3703255 .. 3704802
1548 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g03220.1

Sequence Viewer

Length: 1548 bp
ATGTTGGACTTGGAACATACTCGGTTCTTGTCCTACCCTCCTGAGACAGAGTCGCCGATTTTCTTTTTCTCTGCGGGAATATTGACTTGCAGGTTGAATTGTCTTGGAAGTAGTGCTTGTGATGCTTTGACGTCTTTGTCTGATGGCACAGGGCTATGTTACACCAAGACACCAGGTTTTCTGAGTGGGTATCACAGTCCAGCTATGTCCAGTAGTTCATATATCAAGGTATGTGGACCAGTGATTCCAAATCCATCATCATCACTGGGGACTGCTGGCAACAAAAAGAATTGGAAGTTGCGTAGATGGATAGTGGTTGTTGTAGTTTTAGCCACCGTCTTTGGTTTGATGGCATTTGAAGGTGGTTTGTGGTGGTGGTTTTGCAGAAACAGTCGCAGCTTTGGTGGATTGTCTGCTCAATATGCGCTTCTTGAGTATGCTTCTGGTGCACCGGTTCAGTTCTCGTATAAGGAGCTCCAACGCTCAACGAAGGGATTCAAGGAGAAGCTTGGGGCAGGAGGATTTGGGGCTGTTTATAAAGGCATTCTTGCTAATAGAACTGTTGTTGCAGTTAAGCAACTTGAGGGGATTGAGCAAGGGGAGAAACAGTTCAGGATGGAGGTTGCAACAATTAGTAGCACACACCATTTGAATCTGGTTAGGCTGATTGGTTTTTGCTCCGAGGGGCGCCATAGGCTTCTGGTATATGAGTTCATGAAAAATGGGTCCCTTGATAGTTTTCTTTTTGCAACAGAAGAGCAATCAGGAAAGTTGTTGAATTGGGAGTCTCGGTTCCACATTGCCCTCGGCACTGCAAGGGGGATCACATACCTTCATGAGGAATGCCGAGACTGCATTGTGCATTGTGATATAAAACCAGAGAACATTCTGTTAGATGAGAATTACAATGCCAAGGTGTCAGATTTTGGCCTCGCAAAGCTCGTTAATCCAAAGGACCATAGGTATCGAACCTTGACAAGTGTTAGGGGTACTAGAGGGTATTTGGCACCAGAATGGCTAGCAAATCTTCCAATAACTTCCAAATCTGATGTTTACAGTTACGGTATGGTTTTGCTAGAGATAGTGAGTGGGAGAAGGAATTTTGAAGTTTCTGAGGCAACAAATAGGAAGAAGTTCTCCTTATGGGCTTTTGAGGAATTTGAGAAGGGTAACATCAAGGGAATTGTTGATAGAAGGCTAGTCGACCAAGATGTTGATATGGATCAAGTGAAGAGAGCAATTCAGGTAACCTTCTGGTGCATACAGGAACAACCATCTCACAGGCCGATGATGGGAAAAGTTGTGCAGATGCTGGAAGGAATTACGGATATTGAAAACCCCCCAGACCCAAGGGCTGTCATCGAAGGGTCTGCCGGGGGAACCAGCATGACTGTGAGCAGTAATGTCAACCCTTTATCTACTGCCGCAGAATCAGCCCCAGCTCCTTCCTCATTTTCATCATTCCAAAGTTCAGGTGTATCGCCTCTAACATCAGGGAGGAATACGGAGAAGGCAACTGCATCCCTTATACAGTCAGACCCAAATTGA

Protein Analysis

516

Amino Acids

56.86

Weight (kDa)

8.2

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 166 - 438 5.2e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 167 - 436 5.5e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 537
AasI GACNNNNNNGTC 1 cut(s) 136
AatII GACGTC 1 cut(s) 134
Acc36I ACCTGC 1 cut(s) 81
AccB1I GGYRCC 2 cut(s) 687, 1006
AccI GTMKAC 1 cut(s) 1203
AciI CCGC 2 cut(s) 74, 1425
AclWI GGATC 2 cut(s) 830, 1230
AcsI RAATTY 2 cut(s) 1099, 1157
AcyI GRCGYC 2 cut(s) 131, 688
AfaI GTAC 1 cut(s) 991
AfiI CCNNNNNNNGG 2 cut(s) 838, 1292
AgeI ACCGGT 1 cut(s) 451
AgsI TTSAA 7 cut(s) 97, 359, 499, 652, 778, 1106, 1334
AjnI CCWGG 1 cut(s) 172
AloI GAACNNNNNNTCC 4 cut(s) 593, 625, 776, 808
AluBI AGCT 6 cut(s) 203, 399, 475, 508, 940, 1442
AluI AGCT 6 cut(s) 203, 399, 475, 508, 940, 1442
Alw21I GWGCWC 2 cut(s) 451, 477
Alw26I GTCTC 3 cut(s) 38, 792, 843
Alw44I GTGCAC 1 cut(s) 447
AlwI GGATC 2 cut(s) 830, 1230
AlwNI CAGNNNCTG 1 cut(s) 1312
AoxI GGCC 2 cut(s) 928, 1283
ApaLI GTGCAC 1 cut(s) 447
ApeKI GCWGC 1 cut(s) 396
ApoI RAATTY 2 cut(s) 1099, 1157
AsiGI ACCGGT 1 cut(s) 451
Asp700I GAANNNNTTC 3 cut(s) 494, 608, 1133
AspLEI GCGC 2 cut(s) 427, 690
AspS9I GGNCC 3 cut(s) 236, 726, 955
AsuC2I CCSGG 1 cut(s) 1375
AsuNHI GCTAGC 1 cut(s) 1018
AvaII GGWCC 3 cut(s) 236, 726, 955
BaeGI GKGCMC 1 cut(s) 451
BanI GGYRCC 2 cut(s) 687, 1006
BanII GRGCYC 1 cut(s) 477
Bbv12I GWGCWC 2 cut(s) 451, 477
BbvI GCAGC 1 cut(s) 408
BccI CCATC 7 cut(s) 137, 262, 300, 343, 610, 1282, 1285
BcgI CGANNNNNNTGC 2 cut(s) 1352, 1386
BciT130I CCWGG 1 cut(s) 174
BcnI CCSGG 1 cut(s) 1375
BcoDI GTCTC 3 cut(s) 38, 792, 843
BfaI CTAG 4 cut(s) 993, 1019, 1076, 1199
BfoI RGCGCY 1 cut(s) 691
BfuAI ACCTGC 1 cut(s) 81
BisI GCNGC 2 cut(s) 397, 1425
BlsI GCNGC 2 cut(s) 398, 1426
Bme1390I CCNGG 2 cut(s) 174, 1375
Bme18I GGWCC 3 cut(s) 236, 726, 955
BmgT120I GGNCC 3 cut(s) 236, 726, 955
BmiI GGNNCC 6 cut(s) 689, 727, 728, 794, 1008, 1381
BmrFI CCNGG 2 cut(s) 174, 1375
BmrI ACTGGG 1 cut(s) 275
BmsI GCATC 3 cut(s) 112, 1299, 1529
BmtI GCTAGC 1 cut(s) 1022
BmuI ACTGGG 1 cut(s) 275
BpuEI CTTGAG 2 cut(s) 452, 602
BpuMI CCSGG 1 cut(s) 1375
BsaBI GATNNNNATC 1 cut(s) 1221
BsaHI GRCGYC 2 cut(s) 131, 688
BsaJI CCNNGG 5 cut(s) 681, 805, 912, 1349, 1374
BsaWI WCCGGW 1 cut(s) 451
BsaXI ACNNNNNCTCC 4 cut(s) 593, 623, 776, 806
Bsc4I CCNNNNNNNGG 2 cut(s) 838, 1292
Bse118I RCCGGY 1 cut(s) 451
Bse1I ACTGG 3 cut(s) 210, 239, 270
Bse3DI GCAATG 1 cut(s) 798
Bse8I GATNNNNATC 1 cut(s) 1221
BseBI CCWGG 1 cut(s) 174
BseDI CCNNGG 5 cut(s) 681, 805, 912, 1349, 1374
BseGI GGATG 2 cut(s) 621, 1520
BseJI GATNNNNATC 1 cut(s) 1221
BseLI CCNNNNNNNGG 2 cut(s) 838, 1292
BseMI GCAATG 1 cut(s) 798
BseMII CTCAG 3 cut(s) 33, 173, 1104
BseNI ACTGG 3 cut(s) 210, 239, 270
BseSI GKGCMC 1 cut(s) 451
BseXI GCAGC 1 cut(s) 408
BseYI CCCAGC 1 cut(s) 1438
BsgI GTGCAG 1 cut(s) 1325
BshFI GGCC 2 cut(s) 930, 1285
BshNI GGYRCC 2 cut(s) 687, 1006
BshTI ACCGGT 1 cut(s) 451
BsiHKAI GWGCWC 2 cut(s) 451, 477
BsiSI CCGG 2 cut(s) 452, 1374
BslFI GGGAC 2 cut(s) 283, 712
BslI CCNNNNNNNGG 2 cut(s) 838, 1292
BsmAI GTCTC 3 cut(s) 38, 792, 843
BsmFI GGGAC 2 cut(s) 283, 712
BsmI GAATGC 2 cut(s) 543, 848
BsnI GGCC 2 cut(s) 930, 1285
Bsp1286I GDGCHC 2 cut(s) 451, 477
Bsp143I GATC 2 cut(s) 822, 1222
BspACI CCGC 2 cut(s) 74, 1425
BspANI GGCC 2 cut(s) 930, 1285
BspCNI CTCAG 3 cut(s) 34, 174, 1105
BspHI TCATGA 2 cut(s) 714, 835
BspLI GGNNCC 6 cut(s) 689, 727, 728, 794, 1008, 1381
BspMI ACCTGC 1 cut(s) 81
BspOI GCTAGC 1 cut(s) 1022
BspPI GGATC 2 cut(s) 830, 1230
BspQI GCTCTTC 1 cut(s) 750
BspT107I GGYRCC 2 cut(s) 687, 1006
BsrDI GCAATG 1 cut(s) 798
BsrFI RCCGGY 1 cut(s) 451
BsrI ACTGG 3 cut(s) 210, 239, 270
BssAI RCCGGY 1 cut(s) 451
BssECI CCNNGG 5 cut(s) 681, 805, 912, 1349, 1374
BssMI GATC 2 cut(s) 822, 1222
BssNI GRCGYC 2 cut(s) 131, 688
BssT1I CCWWGG 2 cut(s) 912, 1349
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 9 cut(s) 197, 337, 392, 562, 609, 1058, 1064, 1393, 1533
Bst6I CTCTTC 2 cut(s) 750, 1226
BstACI GRCGYC 2 cut(s) 131, 688
BstC8I GCNNGC 2 cut(s) 277, 1020
BstDEI CTNAG 3 cut(s) 42, 182, 1113
BstEII GGTNACC 1 cut(s) 1246
BstENI CCTNNNNNAGG 1 cut(s) 836
BstF5I GGATG 2 cut(s) 621, 1520
BstH2I RGCGCY 1 cut(s) 691
BstHHI GCGC 2 cut(s) 427, 690
BstKTI GATC 2 cut(s) 825, 1225
BstMAI GTCTC 3 cut(s) 38, 792, 843
BstMBI GATC 2 cut(s) 822, 1222
BstMWI GCNNNNNNNGC 6 cut(s) 122, 422, 446, 694, 852, 1433
BstNI CCWGG 1 cut(s) 174
BstPI GGTNACC 1 cut(s) 1246
BstSCI CCNGG 2 cut(s) 172, 1373
BstSLI GKGCMC 1 cut(s) 451
BstV1I GCAGC 1 cut(s) 408
BsuRI GGCC 2 cut(s) 930, 1285
BtsCI GGATG 2 cut(s) 621, 1520
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 3 cut(s) 246, 263, 810
BveI ACCTGC 1 cut(s) 81
Cac8I GCNNGC 2 cut(s) 277, 1020
CaiI CAGNNNCTG 1 cut(s) 1312
CciI TCATGA 2 cut(s) 714, 835
CfoI GCGC 2 cut(s) 427, 690
Cfr10I RCCGGY 1 cut(s) 451
Cfr13I GGNCC 3 cut(s) 236, 726, 955
CsiI ACCWGGT 1 cut(s) 172
Csp6I GTAC 1 cut(s) 990
CspAI ACCGGT 1 cut(s) 451
CspCI CAANNNNNGTGG 4 cut(s) 214, 249, 322, 357
CviAII CATG 3 cut(s) 715, 836, 1387
CviQI GTAC 1 cut(s) 990
DdeI CTNAG 3 cut(s) 42, 182, 1113
DinI GGCGCC 1 cut(s) 689
DpnI GATC 2 cut(s) 824, 1224
DpnII GATC 2 cut(s) 822, 1222
DrdI GACNNNNNNGTC 1 cut(s) 136
DseDI GACNNNNNNGTC 1 cut(s) 136
Eam1104I CTCTTC 2 cut(s) 750, 1226
EarI CTCTTC 2 cut(s) 750, 1226
Ecl136II GAGCTC 1 cut(s) 475
Eco130I CCWWGG 2 cut(s) 912, 1349
Eco24I GRGCYC 1 cut(s) 477
Eco47I GGWCC 3 cut(s) 236, 726, 955
Eco53kI GAGCTC 1 cut(s) 475
Eco91I GGTNACC 1 cut(s) 1246
EcoICRI GAGCTC 1 cut(s) 475
EcoNI CCTNNNNNAGG 1 cut(s) 836
EcoO109I RGGNCCY 1 cut(s) 726
EcoO65I GGTNACC 1 cut(s) 1246
EcoRII CCWGG 1 cut(s) 172
EcoT14I CCWWGG 2 cut(s) 912, 1349
EcoT38I GRGCYC 1 cut(s) 477
EgeI GGCGCC 1 cut(s) 689
EheI GGCGCC 1 cut(s) 689
ErhI CCWWGG 2 cut(s) 912, 1349
FaeI CATG 3 cut(s) 718, 839, 1390
FalI AAGNNNNNCTT 6 cut(s) 100, 132, 531, 563, 1124, 1156
FaqI GGGAC 2 cut(s) 283, 712
FatI CATG 3 cut(s) 714, 835, 1386
FauI CCCGC 1 cut(s) 67
FblI GTMKAC 1 cut(s) 1203
Fnu4HI GCNGC 2 cut(s) 397, 1425
FokI GGATG 2 cut(s) 628, 1507
FriOI GRGCYC 1 cut(s) 477
Fsp4HI GCNGC 2 cut(s) 397, 1425
FspBI CTAG 4 cut(s) 993, 1019, 1076, 1199
GlaI GCGC 2 cut(s) 426, 689
GluI GCNGC 2 cut(s) 397, 1425
GsaI CCCAGC 1 cut(s) 1442
HaeII RGCGCY 1 cut(s) 691
HaeIII GGCC 2 cut(s) 930, 1285
HapII CCGG 2 cut(s) 452, 1374
HhaI GCGC 2 cut(s) 427, 690
Hin1I GRCGYC 2 cut(s) 131, 688
Hin1II CATG 3 cut(s) 718, 839, 1390
Hin6I GCGC 2 cut(s) 425, 688
HinP1I GCGC 2 cut(s) 425, 688
HincII GTYRAC 2 cut(s) 1204, 1408
HindII GTYRAC 2 cut(s) 1204, 1408
HindIII AAGCTT 1 cut(s) 506
HinfI GANTC 6 cut(s) 50, 244, 495, 652, 785, 1430
HpaII CCGG 2 cut(s) 452, 1374
Hpy166II GTNNAC 5 cut(s) 236, 449, 1054, 1204, 1408
Hpy188I TCNGA 7 cut(s) 142, 183, 682, 922, 1048, 1114, 1537
Hpy188III TCNNGA 6 cut(s) 41, 431, 613, 715, 765, 836
Hpy8I GTNNAC 5 cut(s) 236, 449, 1054, 1204, 1408
HpyCH4III ACNGT 9 cut(s) 197, 337, 392, 562, 609, 1058, 1064, 1393, 1533
HpyCH4IV ACGT 1 cut(s) 131
HpyF10VI GCNNNNNNNGC 6 cut(s) 122, 422, 446, 694, 852, 1433
HpyF3I CTNAG 3 cut(s) 42, 182, 1113
HpySE526I ACGT 1 cut(s) 131
Hsp92I GRCGYC 2 cut(s) 131, 688
Hsp92II CATG 3 cut(s) 718, 839, 1390
HspAI GCGC 2 cut(s) 425, 688
KasI GGCGCC 1 cut(s) 687
KflI GGGWCCC 1 cut(s) 726
Kzo9I GATC 2 cut(s) 822, 1222
LguI GCTCTTC 1 cut(s) 750
LmnI GCTCC 4 cut(s) 472, 480, 683, 1447
Lsp1109I GCAGC 1 cut(s) 408
LweI GCATC 3 cut(s) 112, 1299, 1529
MabI ACCWGGT 1 cut(s) 172
MaeI CTAG 4 cut(s) 993, 1019, 1076, 1199
MaeII ACGT 1 cut(s) 131
MaeIII GTNAC 4 cut(s) 158, 1058, 1169, 1246
MalI GATC 2 cut(s) 824, 1224
MboI GATC 2 cut(s) 822, 1222
MboII GAAGA 4 cut(s) 767, 1019, 1141, 1243
MhlI GDGCHC 2 cut(s) 451, 477
Mly113I GGCGCC 1 cut(s) 688
MlyI GAGTC 2 cut(s) 59, 794
MmeI TCCRAC 1 cut(s) 502
MroXI GAANNNNTTC 3 cut(s) 494, 608, 1133
MseI TTAA 2 cut(s) 573, 945
MslI CAYNNNNRTG 2 cut(s) 1012, 1391
MspI CCGG 2 cut(s) 452, 1374
MspR9I CCNGG 2 cut(s) 174, 1375
Mva1269I GAATGC 2 cut(s) 543, 848
MvaI CCWGG 1 cut(s) 174
MwoI GCNNNNNNNGC 6 cut(s) 122, 422, 446, 694, 852, 1433
NarI GGCGCC 1 cut(s) 688
NciI CCSGG 1 cut(s) 1375
NdeII GATC 2 cut(s) 822, 1222
NheI GCTAGC 1 cut(s) 1018
NlaIII CATG 3 cut(s) 718, 839, 1390
NlaIV GGNNCC 6 cut(s) 689, 727, 728, 794, 1008, 1381
NmeAIII GCCGAG 2 cut(s) 786, 872
PagI TCATGA 2 cut(s) 714, 835
PciSI GCTCTTC 1 cut(s) 750
PcsI WCGNNNNNNNCGW 1 cut(s) 939
PctI GAATGC 2 cut(s) 543, 848
PdmI GAANNNNTTC 3 cut(s) 494, 608, 1133
PfeI GAWTC 4 cut(s) 244, 495, 652, 1430
PflFI GACNNNGTC 1 cut(s) 49
PinAI ACCGGT 1 cut(s) 451
PkrI GCNGC 2 cut(s) 398, 1426
PleI GAGTC 2 cut(s) 58, 793
PluTI GGCGCC 1 cut(s) 691
PpsI GAGTC 2 cut(s) 58, 793
PpuMI RGGWCCY 1 cut(s) 726
PsiI TTATAA 1 cut(s) 537
Psp124BI GAGCTC 1 cut(s) 477
Psp5II RGGWCCY 1 cut(s) 726
Psp6I CCWGG 1 cut(s) 172
PspEI GGTNACC 1 cut(s) 1246
PspFI CCCAGC 1 cut(s) 1438
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 6 cut(s) 689, 727, 728, 794, 1008, 1381
PspPI GGNCC 3 cut(s) 236, 726, 955
PspPPI RGGWCCY 1 cut(s) 726
PstNI CAGNNNCTG 1 cut(s) 1312
PsyI GACNNNGTC 1 cut(s) 49
RsaI GTAC 1 cut(s) 991
RsaNI GTAC 1 cut(s) 990
RseI CAYNNNNRTG 2 cut(s) 1012, 1391
SacI GAGCTC 1 cut(s) 477
SalI GTCGAC 1 cut(s) 1202
SapI GCTCTTC 1 cut(s) 750
SaqAI TTAA 2 cut(s) 573, 945
SatI GCNGC 2 cut(s) 397, 1425
Sau3AI GATC 2 cut(s) 822, 1222
Sau96I GGNCC 3 cut(s) 236, 726, 955
SchI GAGTC 2 cut(s) 59, 794
ScrFI CCNGG 2 cut(s) 174, 1375
SduI GDGCHC 2 cut(s) 451, 477
SexAI ACCWGGT 1 cut(s) 172
SfaNI GCATC 3 cut(s) 112, 1299, 1529
SfoI GGCGCC 1 cut(s) 689
SinI GGWCC 3 cut(s) 236, 726, 955
SmiMI CAYNNNNRTG 2 cut(s) 1012, 1391
SmlI CTYRAG 2 cut(s) 431, 581
SmoI CTYRAG 2 cut(s) 431, 581
SsiI CCGC 2 cut(s) 74, 1425
SspDI GGCGCC 1 cut(s) 687
SspI AATATT 1 cut(s) 81
SspMI CTAG 4 cut(s) 993, 1019, 1076, 1199
SstI GAGCTC 1 cut(s) 477
StyD4I CCNGG 2 cut(s) 172, 1373
StyI CCWWGG 2 cut(s) 912, 1349
TaaI ACNGT 9 cut(s) 197, 337, 392, 562, 609, 1058, 1064, 1393, 1533
TaiI ACGT 1 cut(s) 134
TaqI TCGA 3 cut(s) 967, 1203, 1362
TauI GCSGC 1 cut(s) 1427
TfiI GAWTC 4 cut(s) 244, 495, 652, 1430
Tru1I TTAA 2 cut(s) 573, 945
Tru9I TTAA 2 cut(s) 573, 945
TscAI CASTG 3 cut(s) 246, 270, 817
TseI GCWGC 1 cut(s) 396
TspDTI ATGAA 5 cut(s) 207, 703, 731, 824, 1446
TspGWI ACGGA 2 cut(s) 1340, 1520
TspRI CASTG 3 cut(s) 246, 270, 817
Tth111I GACNNNGTC 1 cut(s) 49
VneI GTGCAC 1 cut(s) 447
VpaK11BI GGWCC 3 cut(s) 236, 726, 955
XagI CCTNNNNNAGG 1 cut(s) 836
XapI RAATTY 2 cut(s) 1099, 1157
XmiI GTMKAC 1 cut(s) 1203
XmnI GAANNNNTTC 3 cut(s) 494, 608, 1133
XspI CTAG 4 cut(s) 993, 1019, 1076, 1199
ZraI GACGTC 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.