Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017109.1

Orthogroup ID

OG0010037

Physical Location & Seq

Genomic Coordinates Forward (+)

1858 .. 5905

Gene Structure 4048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017109.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

atgggttgggctttgattggggaggtttcgaggcgcggtcgactcctcctccttcgctgccgtcccagaatttgctctaggcaccagatcagatctaccggggatgaaattgctatgggaacttcgttgacagccgtcaggtgggtggataaagatggtcaacgatggcagagcgtcaaagtctcccctccctccctccttaaaccaaaaccggagcttcctcattatccatacttcaccggagcacccaaaatgccgatcaaattccggcttgtgctcctccctctcttctgtcttttatcccaaaccatctgggccgccacaatttcacccggctcttctctcctcgcttctaatcctaaccaaacctggtcttccccagacagctccttctcttttggcttcattccctctgacccacccacctcacccccttctttcaccgccgccataacctactccggcggcgtccccatctggtctcccggccgcagcgttgactccgccggggccctccacttcctctcatccggcgccctccgcctcgtcgacggctccaacagaaccatatgggactccgacaccgccagccgcggcgtctcctccgctgagctcgacgattccggcaacctggtgctccggagcggcaccggtgctgcggtctggtccagcttcgacaacccgatggatacgatcgtgccgtcgcagaacttcactgtgggtaaggttttgcgatctggtatgtactcgtttaagctcgtcaagaacgggaatctgaccctgttgtggaacgatagtattgtgtattggaatcaagggttgaactcgtctgttactaacagcactcccaatttgacttcacccactttaggattgcagtctattggtattctgagcatttctgatccaaagttgcccactgctgctattgttgcttatagtaatgattatgctgaggctggtgatattttgaggttcttgaagctagagagtgatgggaatgtgaggatttatagctctagtaaaggtagcggggataaaactgagagatgggcagctgttactgatcagtgtcaggtgtttggctactgtgggaacatgggaatttgcagttataatgattccaatcccatatgcagctgcccttctcttaatttcgagccagttgataccaaagatagcaggaaagggtgtaggaggaagatggagattaaggactgccctcagagtgtcactatgttggatttggttcatactaggttcttgacctaccctcctgagacggattcacaggttttctttgtgggtatatcagcctgtaggttaaactgtcttgttaatgatccttgtgatgcttcaacatctttgtctgatggcacagggctctgttactacaagacacccggttttctcagcgggtatcacactccagctttgactagcagttcatatatcaaggtttgtggaccggtgattccaaatccgccctcttcgttggatagtgctggcaagaaaaaggattggaagatcagggcttggatagtggctcttgtggttgtcgcttcccttttgggtttgatggcactggagggtggtctgtggtggtggttttgcaggaacagtccaagctttggtgcattgtctgctcagtatgctcttcttgagtatgcttctggtgcgccagttcagttttcgtacaaagaactccagcgctctaccaagggattcaaggagaagcttggagccggaggatttggagctgtttataagggcattcttgctaatagaactgttgttgcagtgaagcaactcgaggggattgagcaaggagaaaagcagtttaggatggaggttgcaacaattagtagcacccatcatttaaatctagtgaggctgattggtttctgctctgagggccgtcataggcttttagtatatgagttcatgaaaaatgggtcccttgatgatttcctttttgccacagaagagcagtcaggaaaattcttaagttgggagaatcgattcaagattgcccttggcactgcaagggggatcacataccttcacgaggagtgccgagactgcattgtgcattgtgatataaaaccagagaacattctcttggatgagaattacaattccaaagtatctgattttggcctcgctaagcttgttagtccaaaggaccacaggtaccgaactttgaccagtgttagagggactagaggttatttggcaccagaatggttggcaaatctgcctataacttccaaatctgatatttatagttatggtatggttctgttagagatagttagtgggagaaggaattttgaagtttctgaggagacagataggaaaaagttctccatatgggcctttgacgaatttgagaagggtaatatcaagggaatcgttgataaaaggctggctgaccaagatgttgatatggatcaagtgatgagagcaattcaggtgacattctggtgcatacaagagcagccatctcataggccaatgatgggaaaagttgtacaaatgctggaaggaattacagagatggggaaacccccatctccaagggctatcattgaagggcctataattgaaatgcctgttagtggaaccagcactagtgttgtagccccctcctcattttcatcatttcaaatttcagaagtatcgccttctgcaccagctcggaacatggagacagcgactgcatcccttatacagtcagacctgagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

916

Amino Acids

100.6

Weight (kDa)

8.22

Isoelectric Point (pI)

42.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34300
fragaria_vesca	FvH4_2g12390
malus_domestica	MD05G1039400.v1.1 MD05G1039500.v1.1 MD10G1044900.v1.1
prunus_persica	Prupe.8G051900_v2.0.a1
pyrus_communis	pycom05g03200 pycom05g03220 pycom10g03130 pycom10g03140
rosa_chinensis	RchiOBHm_Chr6g0272421
rosa_laevigata	RLG00000013671
rosa_multiflora	Rmu_co8482727.1_g000001 Rmu_sc0017109.1_g000001 Rmu_ssc0000204.1_g000064
rosa_rugosa	Rorug06G0069700
rosa_samantha	Rh6AG185500 Rh6BG188600 Rh6CG186600 Rh6DG178200
rosa_wichuraiana	Rw6G016020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1116, 1767
Acc65I	GGTACC	1 cut(s)	2193
AccB1I	GGYRCC	5 cut(s)	81, 533, 647, 2193, 2236
AccB7I	CCANNNNNTGG	1 cut(s)	1631
AccBSI	CCGCTC	1 cut(s)	645
AccI	GTMKAC	2 cut(s)	40, 549
AccII	CGCG	2 cut(s)	36, 594
AccIII	TCCGGA	1 cut(s)	639
AclWI	GGATC	4 cut(s)	899, 1337, 2060, 2460
AcoI	YGGCCR	1 cut(s)	487
AcsI	RAATTY	7 cut(s)	69, 263, 1104, 2000, 2329, 2387, 2670
AcyI	GRCGYC	3 cut(s)	468, 534, 597
AfaI	GTAC	4 cut(s)	746, 1697, 2195, 2535
AfeI	AGCGCT	1 cut(s)	1712
AfiI	CCNNNNNNNGG	7 cut(s)	141, 786, 869, 1631, 2068, 2522, 2621
AflII	CTTAAG	1 cut(s)	2005
AgeI	ACCGGT	2 cut(s)	650, 1468
AgsI	TTSAA	9 cut(s)	823, 982, 1359, 1729, 2026, 2336, 2594, 2609, 2669
AhlI	ACTAGT	1 cut(s)	2633
AjnI	CCWGG	2 cut(s)	368, 630
AjuI	GAANNNNNNNTTGG	2 cut(s)	2105, 2137
Alw21I	GWGCWC	4 cut(s)	247, 279, 615, 639
Alw26I	GTCTC	7 cut(s)	187, 486, 604, 1274, 2073, 2342, 2705
AlwI	GGATC	4 cut(s)	899, 1337, 2060, 2460
AlwNI	CAGNNNCTG	1 cut(s)	2720
Ama87I	CYCGRG	1 cut(s)	1811
Aor13HI	TCCGGA	1 cut(s)	639
Aor51HI	AGCGCT	1 cut(s)	1712
AoxI	GGCC	8 cut(s)	315, 487, 510, 1915, 2158, 2376, 2513, 2597
ApaI	GGGCCC	1 cut(s)	514
ApeKI	GCWGC	8 cut(s)	57, 492, 656, 923, 1055, 1137, 1140, 2500
ApoI	RAATTY	7 cut(s)	69, 263, 1104, 2000, 2329, 2387, 2670
AsiGI	ACCGGT	2 cut(s)	650, 1468
Asp700I	GAANNNNTTC	2 cut(s)	2021, 2363
Asp718I	GGTACC	1 cut(s)	2193
AspLEI	GCGC	4 cut(s)	36, 536, 1681, 1713
AsuC2I	CCSGG	5 cut(s)	100, 333, 486, 508, 1404
AsuHPI	GGTGA	8 cut(s)	229, 321, 420, 433, 852, 974, 1483, 2488
AvaI	CYCGRG	1 cut(s)	1811
AvaII	GGWCC	4 cut(s)	666, 1466, 1956, 2185
BaeGI	GKGCMC	1 cut(s)	514
BaeI	ACNNNNGTAYC	2 cut(s)	681, 714
BanI	GGYRCC	5 cut(s)	81, 533, 647, 2193, 2236
BanII	GRGCYC	3 cut(s)	514, 615, 1386
BauI	CACGAG	1 cut(s)	2066
BbsI	GAAGAC	1 cut(s)	366
Bbv12I	GWGCWC	4 cut(s)	247, 279, 615, 639
BbvCI	CCTCAGC	1 cut(s)	954
BbvI	GCAGC	8 cut(s)	44, 504, 643, 910, 1067, 1127, 1149, 2512
BceAI	ACGGC	5 cut(s)	45, 119, 568, 685, 1902
BciT130I	CCWGG	2 cut(s)	370, 632
BciVI	GTATCC	1 cut(s)	682
BclI	TGATCA	1 cut(s)	1066
BcnI	CCSGG	5 cut(s)	100, 333, 486, 508, 1404
BcoDI	GTCTC	7 cut(s)	187, 486, 604, 1274, 2073, 2342, 2705
BcuI	ACTAGT	1 cut(s)	2633
BfaI	CTAG	8 cut(s)	78, 986, 1020, 1257, 1440, 1886, 2223, 2634
BfmI	CTRYAG	1 cut(s)	1318
BfoI	RGCGCY	2 cut(s)	537, 1714
BfrI	CTTAAG	1 cut(s)	2005
BfuI	GTATCC	1 cut(s)	682
BglII	AGATCT	1 cut(s)	92
BlpI	GCTNAGC	2 cut(s)	609, 2166
Bme1390I	CCNGG	7 cut(s)	100, 333, 370, 486, 508, 632, 1404
Bme18I	GGWCC	4 cut(s)	666, 1466, 1956, 2185
BmeT110I	CYCGRG	1 cut(s)	1811
BmrFI	CCNGG	7 cut(s)	100, 333, 370, 486, 508, 632, 1404
BmsI	GCATC	2 cut(s)	1342, 2732
BoxI	GACNNNNGTC	1 cut(s)	134
BpiI	GAAGAC	1 cut(s)	366
BpmI	CTGGAG	3 cut(s)	1413, 1607, 1691
Bpu10I	CCTNAGC	1 cut(s)	954
Bpu1102I	GCTNAGC	2 cut(s)	609, 2166
BpuEI	CTTGAG	1 cut(s)	1682
BpuMI	CCSGG	5 cut(s)	100, 333, 486, 508, 1404
Bsa29I	ATCGAT	1 cut(s)	2020
BsaBI	GATNNNNATC	2 cut(s)	1125, 2451
BsaHI	GRCGYC	3 cut(s)	468, 534, 597
BsaI	GGTCTC	1 cut(s)	486
BsaJI	CCNNGG	6 cut(s)	99, 507, 592, 1719, 2035, 2579
BsaWI	WCCGGW	5 cut(s)	211, 239, 639, 650, 1468
BsaXI	ACNNNNNCTCC	4 cut(s)	33, 63, 1258, 1288
Bsc4I	CCNNNNNNNGG	7 cut(s)	141, 786, 869, 1631, 2068, 2522, 2621
Bse118I	RCCGGY	2 cut(s)	650, 1468
Bse1I	ACTGG	4 cut(s)	1163, 1590, 1682, 2208
Bse8I	GATNNNNATC	2 cut(s)	1125, 2451
BseAI	TCCGGA	1 cut(s)	639
BseBI	CCWGG	2 cut(s)	370, 632
BseCI	ATCGAT	1 cut(s)	2020
BseDI	CCNNGG	6 cut(s)	99, 507, 592, 1719, 2035, 2579
BseGI	GGATG	5 cut(s)	109, 527, 1851, 2131, 2723
BseJI	GATNNNNATC	2 cut(s)	1125, 2451
BseLI	CCNNNNNNNGG	7 cut(s)	141, 786, 869, 1631, 2068, 2522, 2621
BseNI	ACTGG	4 cut(s)	1163, 1590, 1682, 2208
BseRI	GAGGAG	8 cut(s)	35, 38, 269, 335, 592, 2084, 2360, 2641
BseSI	GKGCMC	1 cut(s)	514
BseX3I	CGGCCG	1 cut(s)	487
BseXI	GCAGC	8 cut(s)	44, 504, 643, 910, 1067, 1127, 1149, 2512
BsgI	GTGCAG	1 cut(s)	2676
Bsh1236I	CGCG	2 cut(s)	36, 594
Bsh1285I	CGRYCG	3 cut(s)	40, 490, 696
BshFI	GGCC	8 cut(s)	317, 489, 512, 1917, 2160, 2378, 2515, 2599
BshNI	GGYRCC	5 cut(s)	81, 533, 647, 2193, 2236
BshTI	ACCGGT	2 cut(s)	650, 1468
BshVI	ATCGAT	1 cut(s)	2020
BsiEI	CGRYCG	3 cut(s)	40, 490, 696
BsiHKAI	GWGCWC	4 cut(s)	247, 279, 615, 639
BsiHKCI	CYCGRG	1 cut(s)	1811
BslFI	GGGAC	5 cut(s)	48, 455, 587, 1942, 2233
BslI	CCNNNNNNNGG	7 cut(s)	141, 786, 869, 1631, 2068, 2522, 2621
BsmAI	GTCTC	7 cut(s)	187, 486, 604, 1274, 2073, 2342, 2705
BsmBI	CGTCTC	2 cut(s)	604, 1274
BsmFI	GGGAC	5 cut(s)	48, 455, 587, 1942, 2233
BsmI	GAATGC	1 cut(s)	1773
BsnI	GGCC	8 cut(s)	317, 489, 512, 1917, 2160, 2378, 2515, 2599
Bso31I	GGTCTC	1 cut(s)	486
BsoBI	CYCGRG	1 cut(s)	1811
Bsp120I	GGGCCC	1 cut(s)	510
Bsp1286I	GDGCHC	6 cut(s)	247, 279, 514, 615, 639, 1386
Bsp13I	TCCGGA	1 cut(s)	639
Bsp1407I	TGTACA	1 cut(s)	2533
Bsp1720I	GCTNAGC	2 cut(s)	609, 2166
BspANI	GGCC	8 cut(s)	317, 489, 512, 1917, 2160, 2378, 2515, 2599
BspDI	ATCGAT	1 cut(s)	2020
BspEI	TCCGGA	1 cut(s)	639
BspFNI	CGCG	2 cut(s)	36, 594
BspHI	TCATGA	1 cut(s)	1944
BspPI	GGATC	4 cut(s)	899, 1337, 2060, 2460
BspQI	GCTCTTC	3 cut(s)	343, 1662, 1980
BspT107I	GGYRCC	5 cut(s)	81, 533, 647, 2193, 2236
BspTI	CTTAAG	1 cut(s)	2005
BspTNI	GGTCTC	1 cut(s)	486
BsrBI	CCGCTC	1 cut(s)	645
BsrFI	RCCGGY	2 cut(s)	650, 1468
BsrGI	TGTACA	1 cut(s)	2533
BsrI	ACTGG	4 cut(s)	1163, 1590, 1682, 2208
BssAI	RCCGGY	2 cut(s)	650, 1468
BssECI	CCNNGG	6 cut(s)	99, 507, 592, 1719, 2035, 2579
BssNI	GRCGYC	3 cut(s)	468, 534, 597
BssSI	CACGAG	1 cut(s)	2066
BssT1I	CCWWGG	3 cut(s)	1719, 2035, 2579
Bst2BI	CACGAG	1 cut(s)	2066
Bst2UI	CCWGG	2 cut(s)	370, 632
Bst4CI	ACNGT	6 cut(s)	718, 1091, 1331, 1622, 1792, 2736
Bst6I	CTCTTC	5 cut(s)	293, 343, 1495, 1662, 1980
BstACI	GRCGYC	3 cut(s)	468, 534, 597
BstAFI	CTTAAG	1 cut(s)	2005
BstAPI	GCANNNNNTGC	1 cut(s)	1643
BstAUI	TGTACA	1 cut(s)	2533
BstC8I	GCNNGC	3 cut(s)	589, 1507, 2430
BstDSI	CCRYGG	1 cut(s)	592
BstENI	CCTNNNNNAGG	1 cut(s)	2066
BstF5I	GGATG	5 cut(s)	109, 527, 1851, 2131, 2723
BstFNI	CGCG	2 cut(s)	36, 594
BstH2I	RGCGCY	2 cut(s)	537, 1714
BstHHI	GCGC	4 cut(s)	36, 536, 1681, 1713
BstMAI	GTCTC	7 cut(s)	187, 486, 604, 1274, 2073, 2342, 2705
BstMCI	CGRYCG	3 cut(s)	40, 490, 696
BstMWI	GCNNNNNNNGC	7 cut(s)	540, 932, 1643, 1652, 1676, 1914, 2082
BstNI	CCWGG	2 cut(s)	370, 632
BstPAI	GACNNNNGTC	1 cut(s)	134
BstSCI	CCNGG	7 cut(s)	98, 331, 368, 484, 506, 630, 1402
BstSFI	CTRYAG	1 cut(s)	1318
BstSLI	GKGCMC	1 cut(s)	514
BstUI	CGCG	2 cut(s)	36, 594
BstV1I	GCAGC	8 cut(s)	44, 504, 643, 910, 1067, 1127, 1149, 2512
BstV2I	GAAGAC	1 cut(s)	366
BstX2I	RGATCY	1 cut(s)	92
BstYI	RGATCY	1 cut(s)	92
BstZI	CGGCCG	1 cut(s)	487
Bsu15I	ATCGAT	1 cut(s)	2020
BsuI	GTATCC	1 cut(s)	682
BsuRI	GGCC	8 cut(s)	317, 489, 512, 1917, 2160, 2378, 2515, 2599
BsuTUI	ATCGAT	1 cut(s)	2020
BtgI	CCRYGG	1 cut(s)	592
BtsCI	GGATG	5 cut(s)	109, 527, 1851, 2131, 2723
BtsI	GCAGTG	3 cut(s)	918, 1806, 2040
BtsIMutI	CAGTG	7 cut(s)	714, 918, 1076, 1583, 1806, 2040, 2215
Cac8I	GCNNGC	3 cut(s)	589, 1507, 2430
CaiI	CAGNNNCTG	1 cut(s)	2720
CciI	TCATGA	1 cut(s)	1944
CfoI	GCGC	4 cut(s)	36, 536, 1681, 1713
Cfr10I	RCCGGY	2 cut(s)	650, 1468
Cfr42I	CCGCGG	1 cut(s)	595
ClaI	ATCGAT	1 cut(s)	2020
CseI	GACGC	3 cut(s)	163, 457, 586
CsiI	ACCWGGT	2 cut(s)	368, 630
Csp6I	GTAC	4 cut(s)	745, 1696, 2194, 2534
CspAI	ACCGGT	2 cut(s)	650, 1468
CspCI	CAANNNNNGTGG	2 cut(s)	1444, 1479
CviAII	CATG	3 cut(s)	1099, 1945, 2707
CviQI	GTAC	4 cut(s)	745, 1696, 2194, 2534
DinI	GGCGCC	1 cut(s)	535
DraI	TTTAAA	1 cut(s)	1881
EaeI	YGGCCR	1 cut(s)	487
EagI	CGGCCG	1 cut(s)	487
Eam1104I	CTCTTC	5 cut(s)	293, 343, 1495, 1662, 1980
EarI	CTCTTC	5 cut(s)	293, 343, 1495, 1662, 1980
EciI	GGCGGA	3 cut(s)	493, 530, 1473
Ecl136II	GAGCTC	1 cut(s)	613
EclXI	CGGCCG	1 cut(s)	487
Eco130I	CCWWGG	3 cut(s)	1719, 2035, 2579
Eco24I	GRGCYC	3 cut(s)	514, 615, 1386
Eco31I	GGTCTC	1 cut(s)	486
Eco47I	GGWCC	4 cut(s)	666, 1466, 1956, 2185
Eco47III	AGCGCT	1 cut(s)	1712
Eco52I	CGGCCG	1 cut(s)	487
Eco53kI	GAGCTC	1 cut(s)	613
Eco88I	CYCGRG	1 cut(s)	1811
EcoICRI	GAGCTC	1 cut(s)	613
EcoNI	CCTNNNNNAGG	1 cut(s)	2066
EcoO109I	RGGNCCY	4 cut(s)	510, 511, 1956, 2597
EcoRII	CCWGG	2 cut(s)	368, 630
EcoT14I	CCWWGG	3 cut(s)	1719, 2035, 2579
EcoT38I	GRGCYC	3 cut(s)	514, 615, 1386
EgeI	GGCGCC	1 cut(s)	535
EheI	GGCGCC	1 cut(s)	535
ErhI	CCWWGG	3 cut(s)	1719, 2035, 2579
Esp3I	CGTCTC	2 cut(s)	604, 1274
FaeI	CATG	3 cut(s)	1102, 1948, 2710
FaqI	GGGAC	5 cut(s)	48, 455, 587, 1942, 2233
FatI	CATG	3 cut(s)	1098, 1944, 2706
FauI	CCCGC	2 cut(s)	1025, 1409
FauNDI	CATATG	3 cut(s)	569, 1133, 2372
FbaI	TGATCA	1 cut(s)	1066
FblI	GTMKAC	2 cut(s)	40, 549
FokI	GGATG	5 cut(s)	116, 514, 1858, 2138, 2710
FriOI	GRGCYC	3 cut(s)	514, 615, 1386
FspBI	CTAG	8 cut(s)	78, 986, 1020, 1257, 1440, 1886, 2223, 2634
GlaI	GCGC	4 cut(s)	35, 535, 1680, 1712
GsuI	CTGGAG	3 cut(s)	1413, 1607, 1691
HaeII	RGCGCY	2 cut(s)	537, 1714
HaeIII	GGCC	8 cut(s)	317, 489, 512, 1917, 2160, 2378, 2515, 2599
HgaI	GACGC	3 cut(s)	163, 457, 586
HhaI	GCGC	4 cut(s)	36, 536, 1681, 1713
Hin1I	GRCGYC	3 cut(s)	468, 534, 597
Hin1II	CATG	3 cut(s)	1102, 1948, 2710
Hin6I	GCGC	4 cut(s)	34, 534, 1679, 1711
HinP1I	GCGC	4 cut(s)	34, 534, 1679, 1711
HincII	GTYRAC	5 cut(s)	41, 129, 161, 499, 550
HindII	GTYRAC	5 cut(s)	41, 129, 161, 499, 550
HindIII	AAGCTT	3 cut(s)	1627, 1736, 2168
HphI	GGTGA	8 cut(s)	229, 321, 420, 433, 852, 974, 1483, 2488
Hpy166II	GTNNAC	6 cut(s)	41, 129, 161, 499, 550, 1466
Hpy8I	GTNNAC	6 cut(s)	41, 129, 161, 499, 550, 1466
Hpy99I	CGWCG	4 cut(s)	551, 554, 620, 706
HpyCH4III	ACNGT	6 cut(s)	718, 1091, 1331, 1622, 1792, 2736
HpyF10VI	GCNNNNNNNGC	7 cut(s)	540, 932, 1643, 1652, 1676, 1914, 2082
Hsp92I	GRCGYC	3 cut(s)	468, 534, 597
Hsp92II	CATG	3 cut(s)	1102, 1948, 2710
HspAI	GCGC	4 cut(s)	34, 534, 1679, 1711
KasI	GGCGCC	1 cut(s)	533
KflI	GGGWCCC	1 cut(s)	1956
Kpn2I	TCCGGA	1 cut(s)	639
KpnI	GGTACC	1 cut(s)	2197
Ksp22I	TGATCA	1 cut(s)	1066
KspI	CCGCGG	1 cut(s)	595
LguI	GCTCTTC	3 cut(s)	343, 1662, 1980
LmnI	GCTCC	9 cut(s)	214, 242, 282, 392, 560, 642, 642, 1742, 1757
Lsp1109I	GCAGC	8 cut(s)	44, 504, 643, 910, 1067, 1127, 1149, 2512
LweI	GCATC	2 cut(s)	1342, 2732
MabI	ACCWGGT	2 cut(s)	368, 630
MaeI	CTAG	8 cut(s)	78, 986, 1020, 1257, 1440, 1886, 2223, 2634
MaeIII	GTNAC	5 cut(s)	832, 1060, 1231, 1388, 2476
MbiI	CCGCTC	1 cut(s)	645
MboII	GAAGA	8 cut(s)	280, 330, 366, 1213, 1482, 1537, 1649, 1997
MflI	RGATCY	1 cut(s)	92
MhlI	GDGCHC	6 cut(s)	247, 279, 514, 615, 639, 1386
Mly113I	GGCGCC	1 cut(s)	534
MlyI	GAGTC	3 cut(s)	36, 494, 569
MmeI	TCCRAC	4 cut(s)	582, 603, 1221, 1476
MroI	TCCGGA	1 cut(s)	639
MroXI	GAANNNNTTC	2 cut(s)	2021, 2363
MseI	TTAA	8 cut(s)	201, 753, 1152, 1212, 1325, 1338, 1880, 2006
MslI	CAYNNNNRTG	2 cut(s)	2242, 2485
MspA1I	CMGCKG	5 cut(s)	594, 608, 1058, 1140, 1416
MspCI	CTTAAG	1 cut(s)	2005
MspR9I	CCNGG	7 cut(s)	100, 333, 370, 486, 508, 632, 1404
Mva1269I	GAATGC	1 cut(s)	1773
MvaI	CCWGG	2 cut(s)	370, 632
MvnI	CGCG	2 cut(s)	36, 594
MwoI	GCNNNNNNNGC	7 cut(s)	540, 932, 1643, 1652, 1676, 1914, 2082
NarI	GGCGCC	1 cut(s)	534
NciI	CCSGG	5 cut(s)	100, 333, 486, 508, 1404
NdeI	CATATG	3 cut(s)	569, 1133, 2372
NlaIII	CATG	3 cut(s)	1102, 1948, 2710
NmeAIII	GCCGAG	1 cut(s)	2102
NmuCI	GTSAC	2 cut(s)	1231, 2476
PaeR7I	CTCGAG	1 cut(s)	1811
PagI	TCATGA	1 cut(s)	1944
PciSI	GCTCTTC	3 cut(s)	343, 1662, 1980
PcsI	WCGNNNNNNNCGW	1 cut(s)	698
PctI	GAATGC	1 cut(s)	1773
PdmI	GAANNNNTTC	2 cut(s)	2021, 2363
PflMI	CCANNNNNTGG	1 cut(s)	1631
PinAI	ACCGGT	2 cut(s)	650, 1468
Ple19I	CGATCG	1 cut(s)	696
PleI	GAGTC	3 cut(s)	36, 494, 569
PluTI	GGCGCC	1 cut(s)	537
PpsI	GAGTC	3 cut(s)	36, 494, 569
PpuMI	RGGWCCY	1 cut(s)	1956
PshAI	GACNNNNGTC	1 cut(s)	134
PsiI	TTATAA	2 cut(s)	1116, 1767
Psp124BI	GAGCTC	1 cut(s)	615
Psp5II	RGGWCCY	1 cut(s)	1956
Psp6I	CCWGG	2 cut(s)	368, 630
PspGI	CCWGG	2 cut(s)	368, 630
PspOMI	GGGCCC	1 cut(s)	510
PspPPI	RGGWCCY	1 cut(s)	1956
PspXI	VCTCGAGB	1 cut(s)	1811
PstNI	CAGNNNCTG	1 cut(s)	2720
PsuI	RGATCY	1 cut(s)	92
PvuI	CGATCG	1 cut(s)	696
PvuII	CAGCTG	2 cut(s)	1058, 1140
RsaI	GTAC	4 cut(s)	746, 1697, 2195, 2535
RsaNI	GTAC	4 cut(s)	745, 1696, 2194, 2534
RseI	CAYNNNNRTG	2 cut(s)	2242, 2485
SacI	GAGCTC	1 cut(s)	615
SacII	CCGCGG	1 cut(s)	595
SalI	GTCGAC	2 cut(s)	39, 548
SapI	GCTCTTC	3 cut(s)	343, 1662, 1980
SaqAI	TTAA	8 cut(s)	201, 753, 1152, 1212, 1325, 1338, 1880, 2006
SchI	GAGTC	3 cut(s)	36, 494, 569
ScrFI	CCNGG	7 cut(s)	100, 333, 370, 486, 508, 632, 1404
SduI	GDGCHC	6 cut(s)	247, 279, 514, 615, 639, 1386
SexAI	ACCWGGT	2 cut(s)	368, 630
SfaNI	GCATC	2 cut(s)	1342, 2732
SfcI	CTRYAG	1 cut(s)	1318
SfoI	GGCGCC	1 cut(s)	535
Sfr274I	CTCGAG	1 cut(s)	1811
Sfr303I	CCGCGG	1 cut(s)	595
SgrAI	CRCCGGYG	1 cut(s)	650
SgrBI	CCGCGG	1 cut(s)	595
SgrDI	CGTCGACG	1 cut(s)	548
SinI	GGWCC	4 cut(s)	666, 1466, 1956, 2185
SlaI	CTCGAG	1 cut(s)	1811
SmiI	ATTTAAAT	1 cut(s)	1881
SmiMI	CAYNNNNRTG	2 cut(s)	2242, 2485
SmlI	CTYRAG	3 cut(s)	1661, 1811, 2005
SmoI	CTYRAG	3 cut(s)	1661, 1811, 2005
SpeI	ACTAGT	1 cut(s)	2633
SspDI	GGCGCC	1 cut(s)	533
SspMI	CTAG	8 cut(s)	78, 986, 1020, 1257, 1440, 1886, 2223, 2634
SstI	GAGCTC	1 cut(s)	615
StyD4I	CCNGG	7 cut(s)	98, 331, 368, 484, 506, 630, 1402
StyI	CCWWGG	3 cut(s)	1719, 2035, 2579
SwaI	ATTTAAAT	1 cut(s)	1881
TaaI	ACNGT	6 cut(s)	718, 1091, 1331, 1622, 1792, 2736
TaqI	TCGA	8 cut(s)	29, 40, 549, 615, 675, 1158, 1812, 2020
TatI	WGTACW	2 cut(s)	744, 2533
TauI	GCSGC	7 cut(s)	320, 449, 468, 492, 594, 597, 648
Tru1I	TTAA	8 cut(s)	201, 753, 1152, 1212, 1325, 1338, 1880, 2006
Tru9I	TTAA	8 cut(s)	201, 753, 1152, 1212, 1325, 1338, 1880, 2006
TscAI	CASTG	7 cut(s)	721, 925, 1076, 1590, 1806, 2047, 2215
TseFI	GTSAC	2 cut(s)	1231, 2476
TseI	GCWGC	8 cut(s)	57, 492, 656, 923, 1055, 1137, 1140, 2500
Tsp45I	GTSAC	2 cut(s)	1231, 2476
TspDTI	ATGAA	7 cut(s)	120, 394, 1241, 1437, 1933, 1961, 2649
TspGWI	ACGGA	1 cut(s)	1298
TspRI	CASTG	7 cut(s)	721, 925, 1076, 1590, 1806, 2047, 2215
Van91I	CCANNNNNTGG	1 cut(s)	1631
Vha464I	CTTAAG	1 cut(s)	2005
VpaK11BI	GGWCC	4 cut(s)	666, 1466, 1956, 2185
XagI	CCTNNNNNAGG	1 cut(s)	2066
XapI	RAATTY	7 cut(s)	69, 263, 1104, 2000, 2329, 2387, 2670
XhoI	CTCGAG	1 cut(s)	1811
XmiI	GTMKAC	2 cut(s)	40, 549
XmnI	GAANNNNTTC	2 cut(s)	2021, 2363
XspI	CTAG	8 cut(s)	78, 986, 1020, 1257, 1440, 1886, 2223, 2634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.