Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0010037

Physical Location & Seq

Genomic Coordinates Forward (+)

35477981 .. 35480479

Gene Structure 2499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013671

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGCCGATCCAATTCCGGCTTGCGCTCCTCCCTCTCTTCTGTCTTTTATCCCAAACCGTCTGGGCCGCCACAATTTCACCCGGCTCTTCTCTCTTTGCTTCTAATCCTAACCAAACCTGGTCTTCCCCAGACAGCTCCTTCTCTTTTGGCTTCATTCCCTCTGACCCACCCACCTCACCCCCTTCTTTCACCCCCGCCATAACCTACTCCGGCGGCGTCCCCATCTGGTCTCCCGGCAGCAGCGTTGACTCCGCCGGGGCCCTCCACTTCCTCTCATCCGGCGCCCTCCGCCTCGTCGACGGCTCCGGCAAAACCATATGGGACTCCAAAACCGCCAGCCGCGGCGTCTCCTCTGCCGAGCTCGGCGATTCCGGCGACCTGGTGCTCCGGAACGGCACCGGTGCTGCGGTCTGGTCCAGCTTCGACAACCCGACGGATACGATCGTGCCGTCGCAGAACTTCACTGTGGGTAAGGTTTTGCGATCTGGTATGTACTCGTTTAAGCTCATCAAGAATGGGAATCTGACTCTGTTGTGGAACGATAGTATTGTGTATTGGAATCAAGGTTTGAATTCGTCTGTTACTAACAATACCCCCAATTTGACTTCACCTACTTTAGGATTGCAGTCTATTGGTATTCTGACCATTTCTGATCCAAAGTTGCCCACTGCTGCTATTGTTGCTTATAGTAATGATTATGCCGAAGCTGGTGATATTTTGAGGTTCTTCAAGCTAGAGAGTGATGGGACTGTGAGGATTTATAGCACTAGTAAAGGTAGCGGGGATAAAATTGAGAGATGGGCAGCTGTTACTGATCAGTGTCAGGTGTTTGGCTACTGTGGGAACATGGGAATTTGCAGTTATAATGATTCCAATCCCATATGCGGCTGCCCTTCTCTTAATTTCGAGCCAGTTGATCCCAAAGATAGCAGGCAAGGGTGTAGGAGGAAGATGGAGATTAAGGACTGTCCTCAGAGTGTGACTATGTTGGATTTGGATCATACTAGGTTCTTGACCTACCCTCCTGAGACGGATTCACAGATTTTCTTTGTGGGTATATCAGCCTGTAGGTTGAACTGTCTTGTTAATGATCCTTGTGATGCTTCAACATCTTTGTCTGATGGCACAGGGCTCTGTTACTACAAGACACCCGGTTTTCTCAGCGGGTATCACACTCCAGCTTTGACTAGCAGTTCATATATCAAGGTTTGTGGACCGGTGATTCCAAATCCGCCCTCTTCGTTGGATAGTGCTGGCAAGAAAAAGGGTTGGAAGATGAGGGCTTGGATAGTGGTTCTTGTGGTTGTCGCTTCCCTTGTGGGTTTGATGGCACTGGAGGGTGGTCTGTGGTGGTGGTTTTGCAGGAACAGTCCAAGCTTTGGTGCATTGTCTGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCGCCAGTTCAGTTTTCGTACAAAGAACTCCAGCGCTCTACCAAGGGATTCAAGGAGCAGCTTGGAGCCGGAGGATTTGGAGCTGTTTATAAGGGCATTCTTGCTAATAGAACAGTTGTTGCAGTGAAGCAACTCGAGGGGATTGAGCAAGGAGAAAAGCAGTTTAGGATGGAGGTTGCAACAATTAGTAGCACCCATCATTTAAATCTAGTGAGGCTGATTGGTTTCTGCTCTGAGGGCCGTCATAGGCTTTTAGTATATGAGTTCATGAAAAATGGGTCCCTTGATGATTTCCTTTTTGCCACAGAAGAGCAGTCAGGAAAATTCTTAAGTTGGGAGAATCGATTCAAGATTGCCCTTGGCACTGCAAGGGGGATCACATACCTTCACGAGGAGTGCCGAGATTGCATTGTGCATTGTGATATAAAACCAGAGAACATTCTCTTGGATGAGAATTACAATTCCAAAGTATCTGATTTTGGCCTCGCTAAGCTTGTTAATCCAAAGGACCACAGGTACCGAACTTTGACCAGTGTTAGAGGGACTAGAGGTTATTTGGCACCAGAATGGTTGGCAAATCTGCCAATAACTTCCAAATCTGATATTTATAGTTATGGTATGGTTCTGTTAGAGATAGTTAGTGGGAGAAGGAATTTTGAAGTTTCTGACGAGACAGATAGGAAAAAGTTCTCCATATGGGCCTTTGACGAATTTGAGAAGGGTAATATCAAGGGAATCATTGATAAAAGGCTAGCTGACCAAGATGTTGATATGGATCAAGTGATGAGAGCAATTCAGGTGACGTTCTGGTGCATACAAGAGCAGCCATCTCATAGGCCAATGATGGGAAAAGTTGTACAAATGCTGGAAGGAATTACAGAGATGGGGAAACCCCCATCTCCAAGGGCTATCATTGAAGGGCCTACAATTGAAAGGCCTGTTAGTGGAACCAGCTCTAGTCTTGTAGCCCCCTCCTCATTTTCATCATTTCAAATTTCAGAAGTATCGCCTTCTGCACCAGCTAGGAACATGGAGACGGCAACTGCATCTCTTATACAGTCAGACCTGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

833

Amino Acids

91.0

Weight (kDa)

6.14

Isoelectric Point (pI)

39.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	83 - 158	3.4e-13	D-mannose binding lectin
S_locus_glycop	PF00954	237 - 298	3.2e-06	S-locus glycoprotein domain
PK_Tyr_Ser-Thr	PF07714	492 - 764	1.1e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	493 - 762	2e-50	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34300
fragaria_vesca	FvH4_2g12390
malus_domestica	MD05G1039400.v1.1 MD05G1039500.v1.1 MD10G1044900.v1.1
prunus_persica	Prupe.8G051900_v2.0.a1
pyrus_communis	pycom05g03200 pycom05g03220 pycom10g03130 pycom10g03140
rosa_chinensis	RchiOBHm_Chr6g0272421
rosa_laevigata	RLG00000013671
rosa_multiflora	Rmu_co8482727.1_g000001 Rmu_sc0017109.1_g000001 Rmu_ssc0000204.1_g000064
rosa_rugosa	Rorug06G0069700
rosa_samantha	Rh6AG185500 Rh6BG188600 Rh6CG186600 Rh6DG178200
rosa_wichuraiana	Rw6G016020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	864, 1515
Acc65I	GGTACC	1 cut(s)	1941
AccB1I	GGYRCC	4 cut(s)	281, 395, 1941, 1984
AccB7I	CCANNNNNTGG	1 cut(s)	1379
AccI	GTMKAC	1 cut(s)	297
AccII	CGCG	1 cut(s)	342
AccIII	TCCGGA	1 cut(s)	387
AclWI	GGATC	6 cut(s)	647, 911, 1005, 1085, 1808, 2208
AcsI	RAATTY	6 cut(s)	571, 852, 1748, 2077, 2135, 2418
AcyI	GRCGYC	3 cut(s)	216, 282, 345
AfaI	GTAC	4 cut(s)	494, 1445, 1943, 2283
AfeI	AGCGCT	1 cut(s)	1460
AfiI	CCNNNNNNNGG	6 cut(s)	617, 884, 1379, 1816, 2270, 2369
AflII	CTTAAG	1 cut(s)	1753
AgeI	ACCGGT	2 cut(s)	398, 1216
AhlI	ACTAGT	1 cut(s)	767
AjnI	CCWGG	2 cut(s)	116, 378
AjuI	GAANNNNNNNTTGG	2 cut(s)	1853, 1885
Alw21I	GWGCWC	2 cut(s)	363, 387
Alw26I	GTCTC	5 cut(s)	234, 352, 1022, 2090, 2453
AlwI	GGATC	6 cut(s)	647, 911, 1005, 1085, 1808, 2208
Ama87I	CYCGRG	1 cut(s)	1559
Aor13HI	TCCGGA	1 cut(s)	387
Aor51HI	AGCGCT	1 cut(s)	1460
AoxI	GGCC	8 cut(s)	63, 258, 1663, 1906, 2124, 2261, 2345, 2360
ApaI	GGGCCC	1 cut(s)	262
ApeKI	GCWGC	8 cut(s)	237, 240, 404, 671, 803, 888, 1483, 2248
ApoI	RAATTY	6 cut(s)	571, 852, 1748, 2077, 2135, 2418
AsiGI	ACCGGT	2 cut(s)	398, 1216
Asp700I	GAANNNNTTC	2 cut(s)	1769, 2111
Asp718I	GGTACC	1 cut(s)	1941
AspLEI	GCGC	4 cut(s)	25, 284, 1429, 1461
AsuC2I	CCSGG	4 cut(s)	81, 234, 256, 1152
AsuHPI	GGTGA	7 cut(s)	69, 168, 181, 600, 722, 1231, 2236
AsuNHI	GCTAGC	1 cut(s)	2176
AvaI	CYCGRG	1 cut(s)	1559
AvaII	GGWCC	4 cut(s)	414, 1214, 1704, 1933
BaeGI	GKGCMC	1 cut(s)	262
BaeI	ACNNNNGTAYC	2 cut(s)	429, 462
BanI	GGYRCC	4 cut(s)	281, 395, 1941, 1984
BanII	GRGCYC	3 cut(s)	262, 363, 1134
BauI	CACGAG	1 cut(s)	1814
BbsI	GAAGAC	1 cut(s)	114
Bbv12I	GWGCWC	2 cut(s)	363, 387
BbvI	GCAGC	8 cut(s)	249, 252, 391, 658, 815, 875, 1495, 2260
BceAI	ACGGC	5 cut(s)	316, 409, 433, 1650, 2478
BciT130I	CCWGG	2 cut(s)	118, 380
BciVI	GTATCC	1 cut(s)	430
BclI	TGATCA	1 cut(s)	814
BcnI	CCSGG	4 cut(s)	81, 234, 256, 1152
BcoDI	GTCTC	5 cut(s)	234, 352, 1022, 2090, 2453
BcuI	ACTAGT	1 cut(s)	767
BfaI	CTAG	9 cut(s)	734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
BfmI	CTRYAG	1 cut(s)	1066
BfoI	RGCGCY	2 cut(s)	285, 1462
BfrI	CTTAAG	1 cut(s)	1753
BfuI	GTATCC	1 cut(s)	430
BlpI	GCTNAGC	1 cut(s)	1914
Bme1390I	CCNGG	6 cut(s)	81, 118, 234, 256, 380, 1152
Bme18I	GGWCC	4 cut(s)	414, 1214, 1704, 1933
BmeT110I	CYCGRG	1 cut(s)	1559
BmrFI	CCNGG	6 cut(s)	81, 118, 234, 256, 380, 1152
BmsI	GCATC	2 cut(s)	1090, 2480
BmtI	GCTAGC	1 cut(s)	2180
BpiI	GAAGAC	1 cut(s)	114
BpmI	CTGGAG	3 cut(s)	1161, 1355, 1439
Bpu1102I	GCTNAGC	1 cut(s)	1914
BpuEI	CTTGAG	1 cut(s)	1430
BpuMI	CCSGG	4 cut(s)	81, 234, 256, 1152
Bsa29I	ATCGAT	1 cut(s)	1768
BsaBI	GATNNNNATC	3 cut(s)	873, 996, 2199
BsaHI	GRCGYC	3 cut(s)	216, 282, 345
BsaI	GGTCTC	1 cut(s)	234
BsaJI	CCNNGG	5 cut(s)	255, 340, 1467, 1783, 2327
BsaWI	WCCGGW	3 cut(s)	387, 398, 1216
BsaXI	ACNNNNNCTCC	2 cut(s)	1006, 1036
Bsc4I	CCNNNNNNNGG	6 cut(s)	617, 884, 1379, 1816, 2270, 2369
Bse118I	RCCGGY	2 cut(s)	398, 1216
Bse1I	ACTGG	4 cut(s)	911, 1338, 1430, 1956
Bse8I	GATNNNNATC	3 cut(s)	873, 996, 2199
BseAI	TCCGGA	1 cut(s)	387
BseBI	CCWGG	2 cut(s)	118, 380
BseCI	ATCGAT	1 cut(s)	1768
BseDI	CCNNGG	5 cut(s)	255, 340, 1467, 1783, 2327
BseGI	GGATG	3 cut(s)	275, 1599, 1879
BseJI	GATNNNNATC	3 cut(s)	873, 996, 2199
BseLI	CCNNNNNNNGG	6 cut(s)	617, 884, 1379, 1816, 2270, 2369
BseMII	CTCAG	6 cut(s)	986, 1017, 1174, 1409, 1650, 2483
BseNI	ACTGG	4 cut(s)	911, 1338, 1430, 1956
BseRI	GAGGAG	4 cut(s)	17, 340, 1832, 2389
BseSI	GKGCMC	1 cut(s)	262
BseXI	GCAGC	8 cut(s)	249, 252, 391, 658, 815, 875, 1495, 2260
BsgI	GTGCAG	1 cut(s)	2424
Bsh1236I	CGCG	1 cut(s)	342
Bsh1285I	CGRYCG	1 cut(s)	444
BshFI	GGCC	8 cut(s)	65, 260, 1665, 1908, 2126, 2263, 2347, 2362
BshNI	GGYRCC	4 cut(s)	281, 395, 1941, 1984
BshTI	ACCGGT	2 cut(s)	398, 1216
BshVI	ATCGAT	1 cut(s)	1768
BsiEI	CGRYCG	1 cut(s)	444
BsiHKAI	GWGCWC	2 cut(s)	363, 387
BsiHKCI	CYCGRG	1 cut(s)	1559
BslFI	GGGAC	5 cut(s)	203, 335, 760, 1690, 1981
BslI	CCNNNNNNNGG	6 cut(s)	617, 884, 1379, 1816, 2270, 2369
BsmAI	GTCTC	5 cut(s)	234, 352, 1022, 2090, 2453
BsmBI	CGTCTC	3 cut(s)	352, 1022, 2453
BsmFI	GGGAC	5 cut(s)	203, 335, 760, 1690, 1981
BsmI	GAATGC	1 cut(s)	1521
BsnI	GGCC	8 cut(s)	65, 260, 1665, 1908, 2126, 2263, 2347, 2362
Bso31I	GGTCTC	1 cut(s)	234
BsoBI	CYCGRG	1 cut(s)	1559
Bsp120I	GGGCCC	1 cut(s)	258
Bsp1286I	GDGCHC	4 cut(s)	262, 363, 387, 1134
Bsp13I	TCCGGA	1 cut(s)	387
Bsp1407I	TGTACA	1 cut(s)	2281
Bsp1720I	GCTNAGC	1 cut(s)	1914
BspANI	GGCC	8 cut(s)	65, 260, 1665, 1908, 2126, 2263, 2347, 2362
BspCNI	CTCAG	6 cut(s)	985, 1018, 1173, 1408, 1651, 2484
BspDI	ATCGAT	1 cut(s)	1768
BspEI	TCCGGA	1 cut(s)	387
BspFNI	CGCG	1 cut(s)	342
BspHI	TCATGA	1 cut(s)	1692
BspOI	GCTAGC	1 cut(s)	2180
BspPI	GGATC	6 cut(s)	647, 911, 1005, 1085, 1808, 2208
BspQI	GCTCTTC	3 cut(s)	91, 1410, 1728
BspT107I	GGYRCC	4 cut(s)	281, 395, 1941, 1984
BspTI	CTTAAG	1 cut(s)	1753
BspTNI	GGTCTC	1 cut(s)	234
BsrFI	RCCGGY	2 cut(s)	398, 1216
BsrGI	TGTACA	1 cut(s)	2281
BsrI	ACTGG	4 cut(s)	911, 1338, 1430, 1956
BssAI	RCCGGY	2 cut(s)	398, 1216
BssECI	CCNNGG	5 cut(s)	255, 340, 1467, 1783, 2327
BssNI	GRCGYC	3 cut(s)	216, 282, 345
BssSI	CACGAG	1 cut(s)	1814
BssT1I	CCWWGG	3 cut(s)	1467, 1783, 2327
Bst2BI	CACGAG	1 cut(s)	1814
Bst2UI	CCWGG	2 cut(s)	118, 380
Bst4CI	ACNGT	9 cut(s)	58, 466, 751, 839, 968, 1079, 1370, 1540, 2484
Bst6I	CTCTTC	5 cut(s)	41, 91, 1243, 1410, 1728
BstACI	GRCGYC	3 cut(s)	216, 282, 345
BstAFI	CTTAAG	1 cut(s)	1753
BstAPI	GCANNNNNTGC	1 cut(s)	1391
BstAUI	TGTACA	1 cut(s)	2281
BstC8I	GCNNGC	5 cut(s)	21, 337, 932, 1255, 2178
BstDEI	CTNAG	7 cut(s)	972, 1026, 1160, 1395, 1659, 1914, 2492
BstDSI	CCRYGG	1 cut(s)	340
BstENI	CCTNNNNNAGG	2 cut(s)	615, 1814
BstF5I	GGATG	3 cut(s)	275, 1599, 1879
BstFNI	CGCG	1 cut(s)	342
BstH2I	RGCGCY	2 cut(s)	285, 1462
BstHHI	GCGC	4 cut(s)	25, 284, 1429, 1461
BstMAI	GTCTC	5 cut(s)	234, 352, 1022, 2090, 2453
BstMCI	CGRYCG	1 cut(s)	444
BstMWI	GCNNNNNNNGC	8 cut(s)	288, 372, 680, 1391, 1400, 1424, 1662, 1830
BstNI	CCWGG	2 cut(s)	118, 380
BstSCI	CCNGG	6 cut(s)	79, 116, 232, 254, 378, 1150
BstSFI	CTRYAG	1 cut(s)	1066
BstSLI	GKGCMC	1 cut(s)	262
BstUI	CGCG	1 cut(s)	342
BstV1I	GCAGC	8 cut(s)	249, 252, 391, 658, 815, 875, 1495, 2260
BstV2I	GAAGAC	1 cut(s)	114
Bsu15I	ATCGAT	1 cut(s)	1768
BsuI	GTATCC	1 cut(s)	430
BsuRI	GGCC	8 cut(s)	65, 260, 1665, 1908, 2126, 2263, 2347, 2362
BsuTUI	ATCGAT	1 cut(s)	1768
BtgI	CCRYGG	1 cut(s)	340
BtsCI	GGATG	3 cut(s)	275, 1599, 1879
BtsI	GCAGTG	3 cut(s)	666, 1554, 1788
BtsIMutI	CAGTG	7 cut(s)	462, 666, 824, 1331, 1554, 1788, 1963
Cac8I	GCNNGC	5 cut(s)	21, 337, 932, 1255, 2178
CciI	TCATGA	1 cut(s)	1692
CfoI	GCGC	4 cut(s)	25, 284, 1429, 1461
Cfr10I	RCCGGY	2 cut(s)	398, 1216
Cfr42I	CCGCGG	1 cut(s)	343
ClaI	ATCGAT	1 cut(s)	1768
CseI	GACGC	2 cut(s)	205, 334
CsiI	ACCWGGT	2 cut(s)	116, 378
Csp6I	GTAC	4 cut(s)	493, 1444, 1942, 2282
CspAI	ACCGGT	2 cut(s)	398, 1216
CspCI	CAANNNNNGTGG	2 cut(s)	1192, 1227
CviAII	CATG	3 cut(s)	847, 1693, 2455
CviQI	GTAC	4 cut(s)	493, 1444, 1942, 2282
DdeI	CTNAG	7 cut(s)	972, 1026, 1160, 1395, 1659, 1914, 2492
DinI	GGCGCC	1 cut(s)	283
DraI	TTTAAA	1 cut(s)	1629
Eam1104I	CTCTTC	5 cut(s)	41, 91, 1243, 1410, 1728
EarI	CTCTTC	5 cut(s)	41, 91, 1243, 1410, 1728
EciI	GGCGGA	3 cut(s)	241, 278, 1221
Ecl136II	GAGCTC	1 cut(s)	361
Eco130I	CCWWGG	3 cut(s)	1467, 1783, 2327
Eco147I	AGGCCT	1 cut(s)	2362
Eco24I	GRGCYC	3 cut(s)	262, 363, 1134
Eco31I	GGTCTC	1 cut(s)	234
Eco47I	GGWCC	4 cut(s)	414, 1214, 1704, 1933
Eco47III	AGCGCT	1 cut(s)	1460
Eco53kI	GAGCTC	1 cut(s)	361
Eco88I	CYCGRG	1 cut(s)	1559
EcoICRI	GAGCTC	1 cut(s)	361
EcoNI	CCTNNNNNAGG	2 cut(s)	615, 1814
EcoO109I	RGGNCCY	4 cut(s)	258, 259, 1704, 2345
EcoRI	GAATTC	1 cut(s)	571
EcoRII	CCWGG	2 cut(s)	116, 378
EcoT14I	CCWWGG	3 cut(s)	1467, 1783, 2327
EcoT38I	GRGCYC	3 cut(s)	262, 363, 1134
EgeI	GGCGCC	1 cut(s)	283
EheI	GGCGCC	1 cut(s)	283
ErhI	CCWWGG	3 cut(s)	1467, 1783, 2327
Esp3I	CGTCTC	3 cut(s)	352, 1022, 2453
FaeI	CATG	3 cut(s)	850, 1696, 2458
FaqI	GGGAC	5 cut(s)	203, 335, 760, 1690, 1981
FatI	CATG	3 cut(s)	846, 1692, 2454
FauI	CCCGC	3 cut(s)	202, 773, 1157
FauNDI	CATATG	3 cut(s)	317, 881, 2120
FbaI	TGATCA	1 cut(s)	814
FblI	GTMKAC	1 cut(s)	297
FokI	GGATG	3 cut(s)	262, 1606, 1886
FriOI	GRGCYC	3 cut(s)	262, 363, 1134
FspBI	CTAG	9 cut(s)	734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
GlaI	GCGC	4 cut(s)	24, 283, 1428, 1460
GsuI	CTGGAG	3 cut(s)	1161, 1355, 1439
HaeII	RGCGCY	2 cut(s)	285, 1462
HaeIII	GGCC	8 cut(s)	65, 260, 1665, 1908, 2126, 2263, 2347, 2362
HgaI	GACGC	2 cut(s)	205, 334
HhaI	GCGC	4 cut(s)	25, 284, 1429, 1461
Hin1I	GRCGYC	3 cut(s)	216, 282, 345
Hin1II	CATG	3 cut(s)	850, 1696, 2458
Hin6I	GCGC	4 cut(s)	23, 282, 1427, 1459
HinP1I	GCGC	4 cut(s)	23, 282, 1427, 1459
HincII	GTYRAC	2 cut(s)	247, 298
HindII	GTYRAC	2 cut(s)	247, 298
HindIII	AAGCTT	2 cut(s)	1375, 1916
HphI	GGTGA	7 cut(s)	69, 168, 181, 600, 722, 1231, 2236
Hpy166II	GTNNAC	3 cut(s)	247, 298, 1214
Hpy188III	TCNNGA	9 cut(s)	388, 511, 1012, 1025, 1409, 1693, 1743, 1774, 1814
Hpy8I	GTNNAC	3 cut(s)	247, 298, 1214
Hpy99I	CGWCG	4 cut(s)	299, 302, 436, 454
HpyAV	CCTTC	9 cut(s)	148, 192, 903, 1820, 2067, 2137, 2288, 2336, 2445
HpyCH4III	ACNGT	9 cut(s)	58, 466, 751, 839, 968, 1079, 1370, 1540, 2484
HpyCH4IV	ACGT	1 cut(s)	2228
HpyF10VI	GCNNNNNNNGC	8 cut(s)	288, 372, 680, 1391, 1400, 1424, 1662, 1830
HpyF3I	CTNAG	7 cut(s)	972, 1026, 1160, 1395, 1659, 1914, 2492
HpySE526I	ACGT	1 cut(s)	2228
Hsp92I	GRCGYC	3 cut(s)	216, 282, 345
Hsp92II	CATG	3 cut(s)	850, 1696, 2458
HspAI	GCGC	4 cut(s)	23, 282, 1427, 1459
KasI	GGCGCC	1 cut(s)	281
KflI	GGGWCCC	1 cut(s)	1704
Kpn2I	TCCGGA	1 cut(s)	387
KpnI	GGTACC	1 cut(s)	1945
Ksp22I	TGATCA	1 cut(s)	814
KspI	CCGCGG	1 cut(s)	343
LguI	GCTCTTC	3 cut(s)	91, 1410, 1728
LmnI	GCTCC	7 cut(s)	30, 140, 308, 390, 1480, 1490, 1505
Lsp1109I	GCAGC	8 cut(s)	249, 252, 391, 658, 815, 875, 1495, 2260
LweI	GCATC	2 cut(s)	1090, 2480
MabI	ACCWGGT	2 cut(s)	116, 378
MaeI	CTAG	9 cut(s)	734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
MaeII	ACGT	1 cut(s)	2228
MaeIII	GTNAC	5 cut(s)	580, 808, 979, 1136, 2224
MboII	GAAGA	9 cut(s)	28, 78, 114, 718, 961, 1230, 1285, 1397, 1745
MfeI	CAATTG	1 cut(s)	2352
MhlI	GDGCHC	4 cut(s)	262, 363, 387, 1134
Mly113I	GGCGCC	1 cut(s)	282
MlyI	GAGTC	3 cut(s)	242, 317, 520
MmeI	TCCRAC	3 cut(s)	969, 1224, 1250
MroI	TCCGGA	1 cut(s)	387
MroXI	GAANNNNTTC	2 cut(s)	1769, 2111
MseI	TTAA	7 cut(s)	501, 900, 960, 1086, 1628, 1754, 1923
MslI	CAYNNNNRTG	1 cut(s)	1990
MspA1I	CMGCKG	3 cut(s)	342, 806, 1164
MspCI	CTTAAG	1 cut(s)	1753
MspR9I	CCNGG	6 cut(s)	81, 118, 234, 256, 380, 1152
MunI	CAATTG	1 cut(s)	2352
Mva1269I	GAATGC	1 cut(s)	1521
MvaI	CCWGG	2 cut(s)	118, 380
MvnI	CGCG	1 cut(s)	342
MwoI	GCNNNNNNNGC	8 cut(s)	288, 372, 680, 1391, 1400, 1424, 1662, 1830
NarI	GGCGCC	1 cut(s)	282
NciI	CCSGG	4 cut(s)	81, 234, 256, 1152
NdeI	CATATG	3 cut(s)	317, 881, 2120
NheI	GCTAGC	1 cut(s)	2176
NlaIII	CATG	3 cut(s)	850, 1696, 2458
NmeAIII	GCCGAG	3 cut(s)	342, 382, 1850
NmuCI	GTSAC	2 cut(s)	979, 2224
PaeR7I	CTCGAG	1 cut(s)	1559
PagI	TCATGA	1 cut(s)	1692
PceI	AGGCCT	1 cut(s)	2362
PciSI	GCTCTTC	3 cut(s)	91, 1410, 1728
PcsI	WCGNNNNNNNCGW	1 cut(s)	446
PctI	GAATGC	1 cut(s)	1521
PdmI	GAANNNNTTC	2 cut(s)	1769, 2111
PflMI	CCANNNNNTGG	1 cut(s)	1379
PinAI	ACCGGT	2 cut(s)	398, 1216
Ple19I	CGATCG	1 cut(s)	444
PleI	GAGTC	3 cut(s)	242, 317, 520
PluTI	GGCGCC	1 cut(s)	285
PpsI	GAGTC	3 cut(s)	242, 317, 520
PpuMI	RGGWCCY	1 cut(s)	1704
PsiI	TTATAA	2 cut(s)	864, 1515
Psp124BI	GAGCTC	1 cut(s)	363
Psp5II	RGGWCCY	1 cut(s)	1704
Psp6I	CCWGG	2 cut(s)	116, 378
PspGI	CCWGG	2 cut(s)	116, 378
PspOMI	GGGCCC	1 cut(s)	258
PspPPI	RGGWCCY	1 cut(s)	1704
PspXI	VCTCGAGB	1 cut(s)	1559
PvuI	CGATCG	1 cut(s)	444
PvuII	CAGCTG	1 cut(s)	806
RsaI	GTAC	4 cut(s)	494, 1445, 1943, 2283
RsaNI	GTAC	4 cut(s)	493, 1444, 1942, 2282
RseI	CAYNNNNRTG	1 cut(s)	1990
SacI	GAGCTC	1 cut(s)	363
SacII	CCGCGG	1 cut(s)	343
SalI	GTCGAC	1 cut(s)	296
SapI	GCTCTTC	3 cut(s)	91, 1410, 1728
SaqAI	TTAA	7 cut(s)	501, 900, 960, 1086, 1628, 1754, 1923
SchI	GAGTC	3 cut(s)	242, 317, 520
ScrFI	CCNGG	6 cut(s)	81, 118, 234, 256, 380, 1152
SduI	GDGCHC	4 cut(s)	262, 363, 387, 1134
SexAI	ACCWGGT	2 cut(s)	116, 378
SfaNI	GCATC	2 cut(s)	1090, 2480
SfcI	CTRYAG	1 cut(s)	1066
SfoI	GGCGCC	1 cut(s)	283
Sfr274I	CTCGAG	1 cut(s)	1559
Sfr303I	CCGCGG	1 cut(s)	343
SgrAI	CRCCGGYG	1 cut(s)	398
SgrBI	CCGCGG	1 cut(s)	343
SgrDI	CGTCGACG	1 cut(s)	296
SinI	GGWCC	4 cut(s)	414, 1214, 1704, 1933
SlaI	CTCGAG	1 cut(s)	1559
SmiI	ATTTAAAT	1 cut(s)	1629
SmiMI	CAYNNNNRTG	1 cut(s)	1990
SmlI	CTYRAG	3 cut(s)	1409, 1559, 1753
SmoI	CTYRAG	3 cut(s)	1409, 1559, 1753
SpeI	ACTAGT	1 cut(s)	767
SseBI	AGGCCT	1 cut(s)	2362
SspDI	GGCGCC	1 cut(s)	281
SspMI	CTAG	9 cut(s)	734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448
SstI	GAGCTC	1 cut(s)	363
StuI	AGGCCT	1 cut(s)	2362
StyD4I	CCNGG	6 cut(s)	79, 116, 232, 254, 378, 1150
StyI	CCWWGG	3 cut(s)	1467, 1783, 2327
SwaI	ATTTAAAT	1 cut(s)	1629
TaaI	ACNGT	9 cut(s)	58, 466, 751, 839, 968, 1079, 1370, 1540, 2484
TaiI	ACGT	1 cut(s)	2231
TaqI	TCGA	5 cut(s)	297, 423, 906, 1560, 1768
TatI	WGTACW	2 cut(s)	492, 2281
TauI	GCSGC	5 cut(s)	68, 216, 342, 345, 888
Tru1I	TTAA	7 cut(s)	501, 900, 960, 1086, 1628, 1754, 1923
Tru9I	TTAA	7 cut(s)	501, 900, 960, 1086, 1628, 1754, 1923
TscAI	CASTG	7 cut(s)	469, 673, 824, 1338, 1554, 1795, 1963
TseFI	GTSAC	2 cut(s)	979, 2224
TseI	GCWGC	8 cut(s)	237, 240, 404, 671, 803, 888, 1483, 2248
Tsp45I	GTSAC	2 cut(s)	979, 2224
TspDTI	ATGAA	5 cut(s)	142, 1185, 1681, 1709, 2397
TspGWI	ACGGA	2 cut(s)	449, 1046
TspRI	CASTG	7 cut(s)	469, 673, 824, 1338, 1554, 1795, 1963
Van91I	CCANNNNNTGG	1 cut(s)	1379
Vha464I	CTTAAG	1 cut(s)	1753
VpaK11BI	GGWCC	4 cut(s)	414, 1214, 1704, 1933
XagI	CCTNNNNNAGG	2 cut(s)	615, 1814
XapI	RAATTY	6 cut(s)	571, 852, 1748, 2077, 2135, 2418
XhoI	CTCGAG	1 cut(s)	1559
XmiI	GTMKAC	1 cut(s)	297
XmnI	GAANNNNTTC	2 cut(s)	1769, 2111
XspI	CTAG	9 cut(s)	734, 768, 1005, 1188, 1634, 1971, 2177, 2382, 2448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.