pycom05g15830

Forkhead associated domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
19318270 .. 19320257
1988 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15830.3

Sequence Viewer

Length: 993 bp
ATGGCGGCGAGCAGCAGCGATGTGGAGGCGGGGTTCGCGAAGCTCCAAGGCGAAGACTTCGAATACTACATGCAGACCTACTCCATAATCCTGGGCCGGAACTCCAAGAAATCGACGGTGGACGTTGACCTCTCCAGCCTAGGCGGCGGTATGAACATTTCGCGCCACCACGCGCGAATCTTTTACGACTTCACGCGTCGTCGATTCGCGCTCGAGGTCCTCGGAAAGAACGGCTGCCTCGTGGAGGGCGTGCTCCACCTGCCCGGGAACCCGCCGGTCAAGCTCGACTCGCAGGACCTTCTTCAGATCGGAGATAAGGAGTTCTACTTTCTGCTGCCGGTGAGGAGCATTCTCGGTGGACCTGTGGGGCCGAGGCATTACCCCACCTCGGTGCCGGTGGTGCCGAGCCCCGTCGGCCCGGCCCATTACGGGTACCACTCGGGTTCGGGCACTGGGCCAATTGGGAAGAAGGGGAGGGGGAGGGATTTGTATGAGGAGGAGTATGAGGACGAGGACGATGTTGGTGGGGGGAGTGGGAGTGGGAAGAAGATGAGGAGAGAAGGGTATGATGGTTTTGGATACGGTGGCGGGTCGGGTTCTGGTTCAGGCAAGGCCGGAGCTTTGGAGAAGAAGGGAGATGGAAGGTCAAGGGTTGATCGATACACTGACAATCAGCAACTTCTGCATTTGGAGGAAAAGGATGTGGTGTCCTCTGTTGCTACTGTGCTCTCCGATCTTTGTGGTCCAGGAGAATGGATGCCTATGGAGAAACTTCATGCCGAGTTGGTGGACCAGTACAGCAGCATCTGGCATCACACTCGAGTGAGGAGGTATCTCACTTCCGAGGACTGGCCTGGTCCAGAGTCAAAAGGGAAACCGTGGTATGGCTTGCTTATGTTGCTAAGAAAATACCCAGAACACTTCGTCATCAACACAAGGTCCAAGGGCCGGGTAACACTGGAGTTTGTTTCTCTCGTCTCTCTGCTTTCATAA

Protein Analysis

331

Amino Acids

36.31

Weight (kDa)

6.61

Isoelectric Point (pI)

50.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015944)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07220
fragaria_vesca FvH4_2g18540
malus_domestica MD05G1171600.v1.1 MD10G1159800.v1.1
prunus_persica Prupe.8G198900_v2.0.a1
pyrus_communis pycom05g15830 pycom10g13800
rosa_chinensis RchiOBHm_Chr6g0284101
rosa_laevigata RLG00000012769
rosa_multiflora Rmu_sc0003778.1_g000044 Rmu_sc0015649.1_g000003
rosa_roxburghii Rroxscaffold_7G00184930
rosa_rugosa Rorug06G0160700.1
rosa_samantha Rh6BG274200
rosa_wichuraiana Rw6G023540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 267
Acc36I ACCTGC 1 cut(s) 267
Acc65I GGTACC 1 cut(s) 432
AccB1I GGYRCC 3 cut(s) 391, 400, 432
AccII CGCG 6 cut(s) 38, 163, 173, 175, 196, 209
AciI CCGC 6 cut(s) 5, 29, 144, 147, 272, 588
AcuI CTGAAG 1 cut(s) 287
AfaI GTAC 2 cut(s) 434, 797
AfiI CCNNNNNNNGG 6 cut(s) 244, 388, 429, 849, 884, 948
AflIII ACRYGT 1 cut(s) 194
AjnI CCWGG 3 cut(s) 90, 745, 853
AleI CACNNNNGTG 2 cut(s) 389, 821
AloI GAACNNNNNNTCC 2 cut(s) 17, 49
AluBI AGCT 3 cut(s) 43, 283, 620
AluI AGCT 3 cut(s) 43, 283, 620
Alw21I GWGCWC 2 cut(s) 255, 729
Alw26I GTCTC 1 cut(s) 982
AlwNI CAGNNNCTG 1 cut(s) 807
Ama87I CYCGRG 4 cut(s) 212, 263, 439, 819
AoxI GGCC 8 cut(s) 94, 368, 415, 420, 455, 612, 851, 946
ApeKI GCWGC 5 cut(s) 12, 15, 234, 334, 801
Asp718I GGTACC 1 cut(s) 432
AspA2I CCTAGG 1 cut(s) 139
AspLEI GCGC 3 cut(s) 165, 175, 211
AsuC2I CCSGG 4 cut(s) 264, 265, 419, 950
AsuHPI GGTGA 1 cut(s) 352
AsuII TTCGAA 1 cut(s) 60
AvaI CYCGRG 4 cut(s) 212, 263, 439, 819
AvaII GGWCC 7 cut(s) 217, 295, 359, 743, 790, 857, 939
AvrII CCTAGG 1 cut(s) 139
BaeGI GKGCMC 1 cut(s) 452
BanI GGYRCC 3 cut(s) 391, 400, 432
BanII GRGCYC 1 cut(s) 410
BauI CACGAG 1 cut(s) 239
BbsI GAAGAC 1 cut(s) 60
Bbv12I GWGCWC 2 cut(s) 255, 729
BbvI GCAGC 5 cut(s) 24, 27, 221, 321, 813
BccI CCATC 2 cut(s) 563, 632
BceAI ACGGC 1 cut(s) 247
BcgI CGANNNNNNTGC 2 cut(s) 800, 834
BciT130I CCWGG 3 cut(s) 92, 747, 855
BciVI GTATCC 1 cut(s) 572
BcnI CCSGG 4 cut(s) 264, 265, 419, 950
BcoDI GTCTC 1 cut(s) 982
BfaI CTAG 1 cut(s) 140
BfuAI ACCTGC 1 cut(s) 267
BfuI GTATCC 1 cut(s) 572
BglI GCCNNNNNGGC 2 cut(s) 144, 414
BisI GCNGC 7 cut(s) 6, 13, 16, 145, 235, 335, 802
BlnI CCTAGG 1 cut(s) 139
BlsI GCNGC 7 cut(s) 7, 14, 17, 146, 236, 336, 803
Bme1390I CCNGG 7 cut(s) 92, 264, 265, 419, 747, 855, 950
Bme18I GGWCC 7 cut(s) 217, 295, 359, 743, 790, 857, 939
BmeT110I CYCGRG 4 cut(s) 212, 263, 439, 819
BmiI GGNNCC 5 cut(s) 269, 369, 393, 402, 434
BmrFI CCNGG 7 cut(s) 92, 264, 265, 419, 747, 855, 950
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 3 cut(s) 747, 813, 820
BmuI ACTGGG 1 cut(s) 462
BpiI GAAGAC 1 cut(s) 60
BpmI CTGGAG 2 cut(s) 118, 980
Bpu14I TTCGAA 1 cut(s) 60
BpuMI CCSGG 4 cut(s) 264, 265, 419, 950
Bsa29I ATCGAT 1 cut(s) 658
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 523, 553
Bsc4I CCNNNNNNNGG 6 cut(s) 244, 388, 429, 849, 884, 948
Bse118I RCCGGY 3 cut(s) 274, 337, 394
Bse1I ACTGG 4 cut(s) 457, 793, 854, 963
BseBI CCWGG 3 cut(s) 92, 747, 855
BseCI ATCGAT 1 cut(s) 658
BseGI GGATG 2 cut(s) 706, 762
BseLI CCNNNNNNNGG 6 cut(s) 244, 388, 429, 849, 884, 948
BseNI ACTGG 4 cut(s) 457, 793, 854, 963
BseRI GAGGAG 5 cut(s) 358, 509, 512, 568, 841
BseSI GKGCMC 1 cut(s) 452
BseXI GCAGC 5 cut(s) 24, 27, 221, 321, 813
Bsh1236I CGCG 6 cut(s) 38, 163, 173, 175, 196, 209
BshFI GGCC 8 cut(s) 96, 370, 417, 422, 457, 614, 853, 948
BshNI GGYRCC 3 cut(s) 391, 400, 432
BshVI ATCGAT 1 cut(s) 658
BsiHKAI GWGCWC 2 cut(s) 255, 729
BsiHKCI CYCGRG 4 cut(s) 212, 263, 439, 819
BsiSI CCGG 8 cut(s) 97, 264, 275, 338, 395, 419, 615, 949
BslI CCNNNNNNNGG 6 cut(s) 244, 388, 429, 849, 884, 948
BsmAI GTCTC 1 cut(s) 982
BsmBI CGTCTC 1 cut(s) 982
BsmI GAATGC 1 cut(s) 348
BsnI GGCC 8 cut(s) 96, 370, 417, 422, 457, 614, 853, 948
BsoBI CYCGRG 4 cut(s) 212, 263, 439, 819
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 4 cut(s) 255, 410, 452, 729
Bsp143I GATC 3 cut(s) 306, 655, 733
Bsp68I TCGCGA 1 cut(s) 38
BspACI CCGC 6 cut(s) 5, 29, 144, 147, 272, 588
BspANI GGCC 8 cut(s) 96, 370, 417, 422, 457, 614, 853, 948
BspDI ATCGAT 1 cut(s) 658
BspFNI CGCG 6 cut(s) 38, 163, 173, 175, 196, 209
BspLI GGNNCC 5 cut(s) 269, 369, 393, 402, 434
BspMI ACCTGC 1 cut(s) 267
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 3 cut(s) 391, 400, 432
BsrFI RCCGGY 3 cut(s) 274, 337, 394
BsrI ACTGG 4 cut(s) 457, 793, 854, 963
BssAI RCCGGY 3 cut(s) 274, 337, 394
BssMI GATC 3 cut(s) 306, 655, 733
BssSI CACGAG 1 cut(s) 239
BssT1I CCWWGG 3 cut(s) 46, 139, 942
Bst2BI CACGAG 1 cut(s) 239
Bst2UI CCWGG 3 cut(s) 92, 747, 855
Bst4CI ACNGT 4 cut(s) 118, 584, 724, 879
BstAPI GCANNNNNTGC 1 cut(s) 682
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 3 cut(s) 10, 251, 890
BstDEI CTNAG 1 cut(s) 902
BstDSI CCRYGG 1 cut(s) 878
BstENI CCTNNNNNAGG 1 cut(s) 242
BstF5I GGATG 2 cut(s) 706, 762
BstFNI CGCG 6 cut(s) 38, 163, 173, 175, 196, 209
BstHHI GCGC 3 cut(s) 165, 175, 211
BstKTI GATC 3 cut(s) 309, 658, 736
BstMAI GTCTC 1 cut(s) 982
BstMBI GATC 3 cut(s) 306, 655, 733
BstMWI GCNNNNNNNGC 9 cut(s) 35, 144, 259, 280, 289, 400, 414, 682, 898
BstNI CCWGG 3 cut(s) 92, 747, 855
BstNSI RCATGY 1 cut(s) 73
BstSCI CCNGG 7 cut(s) 90, 262, 263, 417, 745, 853, 948
BstSLI GKGCMC 1 cut(s) 452
BstUI CGCG 6 cut(s) 38, 163, 173, 175, 196, 209
BstV1I GCAGC 5 cut(s) 24, 27, 221, 321, 813
BstV2I GAAGAC 1 cut(s) 60
BstXI CCANNNNNNTGG 2 cut(s) 91, 753
Bsu15I ATCGAT 1 cut(s) 658
BsuI GTATCC 1 cut(s) 572
BsuRI GGCC 8 cut(s) 96, 370, 417, 422, 457, 614, 853, 948
BsuTUI ATCGAT 1 cut(s) 658
BtgI CCRYGG 1 cut(s) 878
BtgZI GCGATG 1 cut(s) 33
BtsCI GGATG 2 cut(s) 706, 762
BtsIMutI CAGTG 3 cut(s) 450, 663, 956
BtuMI TCGCGA 1 cut(s) 38
BveI ACCTGC 1 cut(s) 267
Cac8I GCNNGC 3 cut(s) 10, 251, 890
CaiI CAGNNNCTG 1 cut(s) 807
CfoI GCGC 3 cut(s) 165, 175, 211
Cfr10I RCCGGY 3 cut(s) 274, 337, 394
Cfr9I CCCGGG 1 cut(s) 263
ClaI ATCGAT 1 cut(s) 658
CseI GACGC 1 cut(s) 185
Csp6I GTAC 2 cut(s) 433, 796
CviAII CATG 2 cut(s) 70, 776
CviQI GTAC 2 cut(s) 433, 796
DdeI CTNAG 1 cut(s) 902
DpnI GATC 3 cut(s) 308, 657, 735
DpnII GATC 3 cut(s) 306, 655, 733
Eco130I CCWWGG 3 cut(s) 46, 139, 942
Eco24I GRGCYC 1 cut(s) 410
Eco47I GGWCC 7 cut(s) 217, 295, 359, 743, 790, 857, 939
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 4 cut(s) 212, 263, 439, 819
EcoNI CCTNNNNNAGG 1 cut(s) 242
EcoO109I RGGNCCY 2 cut(s) 217, 295
EcoRII CCWGG 3 cut(s) 90, 745, 853
EcoT14I CCWWGG 3 cut(s) 46, 139, 942
EcoT38I GRGCYC 1 cut(s) 410
ErhI CCWWGG 3 cut(s) 46, 139, 942
Esp3I CGTCTC 1 cut(s) 982
FaeI CATG 2 cut(s) 73, 779
FatI CATG 2 cut(s) 69, 775
FauI CCCGC 3 cut(s) 22, 279, 581
Fnu4HI GCNGC 7 cut(s) 6, 13, 16, 145, 235, 335, 802
FokI GGATG 2 cut(s) 713, 769
FriOI GRGCYC 1 cut(s) 410
Fsp4HI GCNGC 7 cut(s) 6, 13, 16, 145, 235, 335, 802
FspBI CTAG 1 cut(s) 140
GlaI GCGC 3 cut(s) 164, 174, 210
GluI GCNGC 7 cut(s) 6, 13, 16, 145, 235, 335, 802
GsuI CTGGAG 2 cut(s) 118, 980
HaeIII GGCC 8 cut(s) 96, 370, 417, 422, 457, 614, 853, 948
HapII CCGG 8 cut(s) 97, 264, 275, 338, 395, 419, 615, 949
HgaI GACGC 1 cut(s) 185
HhaI GCGC 3 cut(s) 165, 175, 211
Hin1II CATG 2 cut(s) 73, 779
Hin6I GCGC 3 cut(s) 163, 173, 209
HinP1I GCGC 3 cut(s) 163, 173, 209
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HinfI GANTC 4 cut(s) 177, 204, 287, 863
HpaII CCGG 8 cut(s) 97, 264, 275, 338, 395, 419, 615, 949
HphI GGTGA 1 cut(s) 352
Hpy166II GTNNAC 4 cut(s) 121, 127, 359, 790
Hpy188I TCNGA 5 cut(s) 224, 306, 311, 733, 844
Hpy188III TCNNGA 2 cut(s) 37, 860
Hpy8I GTNNAC 4 cut(s) 121, 127, 359, 790
Hpy99I CGWCG 4 cut(s) 118, 201, 204, 416
HpyAV CCTTC 5 cut(s) 308, 463, 554, 625, 636
HpyCH4III ACNGT 4 cut(s) 118, 584, 724, 879
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 2 cut(s) 73, 685
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 144, 259, 280, 289, 400, 414, 682, 898
HpyF3I CTNAG 1 cut(s) 902
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 2 cut(s) 73, 779
HspAI GCGC 3 cut(s) 163, 173, 209
KpnI GGTACC 1 cut(s) 436
Kzo9I GATC 3 cut(s) 306, 655, 733
LmnI GCTCC 4 cut(s) 48, 258, 345, 617
Lsp1109I GCAGC 5 cut(s) 24, 27, 221, 321, 813
LweI GCATC 3 cut(s) 747, 813, 820
MaeI CTAG 1 cut(s) 140
MaeII ACGT 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 952
MalI GATC 3 cut(s) 308, 657, 735
MboI GATC 3 cut(s) 306, 655, 733
MboII GAAGA 6 cut(s) 65, 293, 478, 556, 559, 640
MfeI CAATTG 1 cut(s) 459
MhlI GDGCHC 4 cut(s) 255, 410, 452, 729
MluCI AATT 1 cut(s) 459
MluI ACGCGT 1 cut(s) 194
MlyI GAGTC 2 cut(s) 281, 872
MslI CAYNNNNRTG 2 cut(s) 389, 821
MspI CCGG 8 cut(s) 97, 264, 275, 338, 395, 419, 615, 949
MspR9I CCNGG 7 cut(s) 92, 264, 265, 419, 747, 855, 950
MunI CAATTG 1 cut(s) 459
Mva1269I GAATGC 1 cut(s) 348
MvaI CCWGG 3 cut(s) 92, 747, 855
MvnI CGCG 6 cut(s) 38, 163, 173, 175, 196, 209
MwoI GCNNNNNNNGC 9 cut(s) 35, 144, 259, 280, 289, 400, 414, 682, 898
NciI CCSGG 4 cut(s) 264, 265, 419, 950
NdeII GATC 3 cut(s) 306, 655, 733
NlaIII CATG 2 cut(s) 73, 779
NlaIV GGNNCC 5 cut(s) 269, 369, 393, 402, 434
NmeAIII GCCGAG 3 cut(s) 396, 429, 805
NruI TCGCGA 1 cut(s) 38
NspI RCATGY 1 cut(s) 73
NspV TTCGAA 1 cut(s) 60
OliI CACNNNNGTG 2 cut(s) 389, 821
PaeR7I CTCGAG 2 cut(s) 212, 819
PaqCI CACCTGC 1 cut(s) 267
PcsI WCGNNNNNNNCGW 2 cut(s) 237, 246
PctI GAATGC 1 cut(s) 348
PfeI GAWTC 2 cut(s) 177, 204
PfoI TCCNGGA 1 cut(s) 745
PkrI GCNGC 7 cut(s) 7, 14, 17, 146, 236, 336, 803
PleI GAGTC 2 cut(s) 281, 871
PpsI GAGTC 2 cut(s) 281, 871
PpuMI RGGWCCY 2 cut(s) 217, 295
Psp5II RGGWCCY 2 cut(s) 217, 295
Psp6I CCWGG 3 cut(s) 90, 745, 853
PspGI CCWGG 3 cut(s) 90, 745, 853
PspN4I GGNNCC 5 cut(s) 269, 369, 393, 402, 434
PspPPI RGGWCCY 2 cut(s) 217, 295
PspXI VCTCGAGB 2 cut(s) 212, 819
PstNI CAGNNNCTG 1 cut(s) 807
RruI TCGCGA 1 cut(s) 38
RsaI GTAC 2 cut(s) 434, 797
RsaNI GTAC 2 cut(s) 433, 796
RseI CAYNNNNRTG 2 cut(s) 389, 821
SatI GCNGC 7 cut(s) 6, 13, 16, 145, 235, 335, 802
Sau3AI GATC 3 cut(s) 306, 655, 733
SchI GAGTC 2 cut(s) 281, 872
ScrFI CCNGG 7 cut(s) 92, 264, 265, 419, 747, 855, 950
SduI GDGCHC 4 cut(s) 255, 410, 452, 729
SfaNI GCATC 3 cut(s) 747, 813, 820
Sfr274I CTCGAG 2 cut(s) 212, 819
SfuI TTCGAA 1 cut(s) 60
SinI GGWCC 7 cut(s) 217, 295, 359, 743, 790, 857, 939
SlaI CTCGAG 2 cut(s) 212, 819
SmaI CCCGGG 1 cut(s) 265
SmiMI CAYNNNNRTG 2 cut(s) 389, 821
SmlI CTYRAG 2 cut(s) 212, 819
SmoI CTYRAG 2 cut(s) 212, 819
Sse9I AATT 1 cut(s) 459
SsiI CCGC 6 cut(s) 5, 29, 144, 147, 272, 588
SspMI CTAG 1 cut(s) 140
StyD4I CCNGG 7 cut(s) 90, 262, 263, 417, 745, 853, 948
StyI CCWWGG 3 cut(s) 46, 139, 942
TaaI ACNGT 4 cut(s) 118, 584, 724, 879
TaiI ACGT 1 cut(s) 126
TaqI TCGA 7 cut(s) 60, 113, 202, 213, 285, 658, 820
TasI AATT 1 cut(s) 459
TatI WGTACW 1 cut(s) 795
TauI GCSGC 2 cut(s) 8, 147
TfiI GAWTC 2 cut(s) 177, 204
TscAI CASTG 3 cut(s) 457, 670, 963
TseI GCWGC 5 cut(s) 12, 15, 234, 334, 801
TspDTI ATGAA 3 cut(s) 167, 764, 978
TspMI CCCGGG 1 cut(s) 263
TspRI CASTG 3 cut(s) 457, 670, 963
VpaK11BI GGWCC 7 cut(s) 217, 295, 359, 743, 790, 857, 939
XagI CCTNNNNNAGG 1 cut(s) 242
XceI RCATGY 1 cut(s) 73
XhoI CTCGAG 2 cut(s) 212, 819
XmaI CCCGGG 1 cut(s) 263
XmaJI CCTAGG 1 cut(s) 139
XspI CTAG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.