Forkhead associated domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07220 |
| fragaria_vesca | FvH4_2g18540 |
| malus_domestica | MD05G1171600.v1.1 MD10G1159800.v1.1 |
| prunus_persica | Prupe.8G198900_v2.0.a1 |
| pyrus_communis | pycom05g15830 pycom10g13800 |
| rosa_chinensis | RchiOBHm_Chr6g0284101 |
| rosa_laevigata | RLG00000012769 |
| rosa_multiflora | Rmu_sc0003778.1_g000044 Rmu_sc0015649.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00184930 |
| rosa_rugosa | Rorug06G0160700.1 |
| rosa_samantha | Rh6BG274200 |
| rosa_wichuraiana | Rw6G023540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 267 |
| Acc36I | ACCTGC | 1 cut(s) | 267 |
| Acc65I | GGTACC | 1 cut(s) | 432 |
| AccB1I | GGYRCC | 3 cut(s) | 391, 400, 432 |
| AccII | CGCG | 6 cut(s) | 38, 163, 173, 175, 196, 209 |
| AciI | CCGC | 6 cut(s) | 5, 29, 144, 147, 272, 588 |
| AcuI | CTGAAG | 1 cut(s) | 287 |
| AfaI | GTAC | 2 cut(s) | 434, 797 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 244, 388, 429, 849, 884, 948 |
| AflIII | ACRYGT | 1 cut(s) | 194 |
| AjnI | CCWGG | 3 cut(s) | 90, 745, 853 |
| AleI | CACNNNNGTG | 2 cut(s) | 389, 821 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 17, 49 |
| AluBI | AGCT | 3 cut(s) | 43, 283, 620 |
| AluI | AGCT | 3 cut(s) | 43, 283, 620 |
| Alw21I | GWGCWC | 2 cut(s) | 255, 729 |
| Alw26I | GTCTC | 1 cut(s) | 982 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 807 |
| Ama87I | CYCGRG | 4 cut(s) | 212, 263, 439, 819 |
| AoxI | GGCC | 8 cut(s) | 94, 368, 415, 420, 455, 612, 851, 946 |
| ApeKI | GCWGC | 5 cut(s) | 12, 15, 234, 334, 801 |
| Asp718I | GGTACC | 1 cut(s) | 432 |
| AspA2I | CCTAGG | 1 cut(s) | 139 |
| AspLEI | GCGC | 3 cut(s) | 165, 175, 211 |
| AsuC2I | CCSGG | 4 cut(s) | 264, 265, 419, 950 |
| AsuHPI | GGTGA | 1 cut(s) | 352 |
| AsuII | TTCGAA | 1 cut(s) | 60 |
| AvaI | CYCGRG | 4 cut(s) | 212, 263, 439, 819 |
| AvaII | GGWCC | 7 cut(s) | 217, 295, 359, 743, 790, 857, 939 |
| AvrII | CCTAGG | 1 cut(s) | 139 |
| BaeGI | GKGCMC | 1 cut(s) | 452 |
| BanI | GGYRCC | 3 cut(s) | 391, 400, 432 |
| BanII | GRGCYC | 1 cut(s) | 410 |
| BauI | CACGAG | 1 cut(s) | 239 |
| BbsI | GAAGAC | 1 cut(s) | 60 |
| Bbv12I | GWGCWC | 2 cut(s) | 255, 729 |
| BbvI | GCAGC | 5 cut(s) | 24, 27, 221, 321, 813 |
| BccI | CCATC | 2 cut(s) | 563, 632 |
| BceAI | ACGGC | 1 cut(s) | 247 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 800, 834 |
| BciT130I | CCWGG | 3 cut(s) | 92, 747, 855 |
| BciVI | GTATCC | 1 cut(s) | 572 |
| BcnI | CCSGG | 4 cut(s) | 264, 265, 419, 950 |
| BcoDI | GTCTC | 1 cut(s) | 982 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BfuAI | ACCTGC | 1 cut(s) | 267 |
| BfuI | GTATCC | 1 cut(s) | 572 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 144, 414 |
| BisI | GCNGC | 7 cut(s) | 6, 13, 16, 145, 235, 335, 802 |
| BlnI | CCTAGG | 1 cut(s) | 139 |
| BlsI | GCNGC | 7 cut(s) | 7, 14, 17, 146, 236, 336, 803 |
| Bme1390I | CCNGG | 7 cut(s) | 92, 264, 265, 419, 747, 855, 950 |
| Bme18I | GGWCC | 7 cut(s) | 217, 295, 359, 743, 790, 857, 939 |
| BmeT110I | CYCGRG | 4 cut(s) | 212, 263, 439, 819 |
| BmiI | GGNNCC | 5 cut(s) | 269, 369, 393, 402, 434 |
| BmrFI | CCNGG | 7 cut(s) | 92, 264, 265, 419, 747, 855, 950 |
| BmrI | ACTGGG | 1 cut(s) | 462 |
| BmsI | GCATC | 3 cut(s) | 747, 813, 820 |
| BmuI | ACTGGG | 1 cut(s) | 462 |
| BpiI | GAAGAC | 1 cut(s) | 60 |
| BpmI | CTGGAG | 2 cut(s) | 118, 980 |
| Bpu14I | TTCGAA | 1 cut(s) | 60 |
| BpuMI | CCSGG | 4 cut(s) | 264, 265, 419, 950 |
| Bsa29I | ATCGAT | 1 cut(s) | 658 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 17, 47, 523, 553 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 244, 388, 429, 849, 884, 948 |
| Bse118I | RCCGGY | 3 cut(s) | 274, 337, 394 |
| Bse1I | ACTGG | 4 cut(s) | 457, 793, 854, 963 |
| BseBI | CCWGG | 3 cut(s) | 92, 747, 855 |
| BseCI | ATCGAT | 1 cut(s) | 658 |
| BseGI | GGATG | 2 cut(s) | 706, 762 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 244, 388, 429, 849, 884, 948 |
| BseNI | ACTGG | 4 cut(s) | 457, 793, 854, 963 |
| BseRI | GAGGAG | 5 cut(s) | 358, 509, 512, 568, 841 |
| BseSI | GKGCMC | 1 cut(s) | 452 |
| BseXI | GCAGC | 5 cut(s) | 24, 27, 221, 321, 813 |
| Bsh1236I | CGCG | 6 cut(s) | 38, 163, 173, 175, 196, 209 |
| BshFI | GGCC | 8 cut(s) | 96, 370, 417, 422, 457, 614, 853, 948 |
| BshNI | GGYRCC | 3 cut(s) | 391, 400, 432 |
| BshVI | ATCGAT | 1 cut(s) | 658 |
| BsiHKAI | GWGCWC | 2 cut(s) | 255, 729 |
| BsiHKCI | CYCGRG | 4 cut(s) | 212, 263, 439, 819 |
| BsiSI | CCGG | 8 cut(s) | 97, 264, 275, 338, 395, 419, 615, 949 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 244, 388, 429, 849, 884, 948 |
| BsmAI | GTCTC | 1 cut(s) | 982 |
| BsmBI | CGTCTC | 1 cut(s) | 982 |
| BsmI | GAATGC | 1 cut(s) | 348 |
| BsnI | GGCC | 8 cut(s) | 96, 370, 417, 422, 457, 614, 853, 948 |
| BsoBI | CYCGRG | 4 cut(s) | 212, 263, 439, 819 |
| Bsp119I | TTCGAA | 1 cut(s) | 60 |
| Bsp1286I | GDGCHC | 4 cut(s) | 255, 410, 452, 729 |
| Bsp143I | GATC | 3 cut(s) | 306, 655, 733 |
| Bsp68I | TCGCGA | 1 cut(s) | 38 |
| BspACI | CCGC | 6 cut(s) | 5, 29, 144, 147, 272, 588 |
| BspANI | GGCC | 8 cut(s) | 96, 370, 417, 422, 457, 614, 853, 948 |
| BspDI | ATCGAT | 1 cut(s) | 658 |
| BspFNI | CGCG | 6 cut(s) | 38, 163, 173, 175, 196, 209 |
| BspLI | GGNNCC | 5 cut(s) | 269, 369, 393, 402, 434 |
| BspMI | ACCTGC | 1 cut(s) | 267 |
| BspT104I | TTCGAA | 1 cut(s) | 60 |
| BspT107I | GGYRCC | 3 cut(s) | 391, 400, 432 |
| BsrFI | RCCGGY | 3 cut(s) | 274, 337, 394 |
| BsrI | ACTGG | 4 cut(s) | 457, 793, 854, 963 |
| BssAI | RCCGGY | 3 cut(s) | 274, 337, 394 |
| BssMI | GATC | 3 cut(s) | 306, 655, 733 |
| BssSI | CACGAG | 1 cut(s) | 239 |
| BssT1I | CCWWGG | 3 cut(s) | 46, 139, 942 |
| Bst2BI | CACGAG | 1 cut(s) | 239 |
| Bst2UI | CCWGG | 3 cut(s) | 92, 747, 855 |
| Bst4CI | ACNGT | 4 cut(s) | 118, 584, 724, 879 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 682 |
| BstBI | TTCGAA | 1 cut(s) | 60 |
| BstC8I | GCNNGC | 3 cut(s) | 10, 251, 890 |
| BstDEI | CTNAG | 1 cut(s) | 902 |
| BstDSI | CCRYGG | 1 cut(s) | 878 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 242 |
| BstF5I | GGATG | 2 cut(s) | 706, 762 |
| BstFNI | CGCG | 6 cut(s) | 38, 163, 173, 175, 196, 209 |
| BstHHI | GCGC | 3 cut(s) | 165, 175, 211 |
| BstKTI | GATC | 3 cut(s) | 309, 658, 736 |
| BstMAI | GTCTC | 1 cut(s) | 982 |
| BstMBI | GATC | 3 cut(s) | 306, 655, 733 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 35, 144, 259, 280, 289, 400, 414, 682, 898 |
| BstNI | CCWGG | 3 cut(s) | 92, 747, 855 |
| BstNSI | RCATGY | 1 cut(s) | 73 |
| BstSCI | CCNGG | 7 cut(s) | 90, 262, 263, 417, 745, 853, 948 |
| BstSLI | GKGCMC | 1 cut(s) | 452 |
| BstUI | CGCG | 6 cut(s) | 38, 163, 173, 175, 196, 209 |
| BstV1I | GCAGC | 5 cut(s) | 24, 27, 221, 321, 813 |
| BstV2I | GAAGAC | 1 cut(s) | 60 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 91, 753 |
| Bsu15I | ATCGAT | 1 cut(s) | 658 |
| BsuI | GTATCC | 1 cut(s) | 572 |
| BsuRI | GGCC | 8 cut(s) | 96, 370, 417, 422, 457, 614, 853, 948 |
| BsuTUI | ATCGAT | 1 cut(s) | 658 |
| BtgI | CCRYGG | 1 cut(s) | 878 |
| BtgZI | GCGATG | 1 cut(s) | 33 |
| BtsCI | GGATG | 2 cut(s) | 706, 762 |
| BtsIMutI | CAGTG | 3 cut(s) | 450, 663, 956 |
| BtuMI | TCGCGA | 1 cut(s) | 38 |
| BveI | ACCTGC | 1 cut(s) | 267 |
| Cac8I | GCNNGC | 3 cut(s) | 10, 251, 890 |
| CaiI | CAGNNNCTG | 1 cut(s) | 807 |
| CfoI | GCGC | 3 cut(s) | 165, 175, 211 |
| Cfr10I | RCCGGY | 3 cut(s) | 274, 337, 394 |
| Cfr9I | CCCGGG | 1 cut(s) | 263 |
| ClaI | ATCGAT | 1 cut(s) | 658 |
| CseI | GACGC | 1 cut(s) | 185 |
| Csp6I | GTAC | 2 cut(s) | 433, 796 |
| CviAII | CATG | 2 cut(s) | 70, 776 |
| CviQI | GTAC | 2 cut(s) | 433, 796 |
| DdeI | CTNAG | 1 cut(s) | 902 |
| DpnI | GATC | 3 cut(s) | 308, 657, 735 |
| DpnII | GATC | 3 cut(s) | 306, 655, 733 |
| Eco130I | CCWWGG | 3 cut(s) | 46, 139, 942 |
| Eco24I | GRGCYC | 1 cut(s) | 410 |
| Eco47I | GGWCC | 7 cut(s) | 217, 295, 359, 743, 790, 857, 939 |
| Eco57I | CTGAAG | 1 cut(s) | 287 |
| Eco88I | CYCGRG | 4 cut(s) | 212, 263, 439, 819 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 242 |
| EcoO109I | RGGNCCY | 2 cut(s) | 217, 295 |
| EcoRII | CCWGG | 3 cut(s) | 90, 745, 853 |
| EcoT14I | CCWWGG | 3 cut(s) | 46, 139, 942 |
| EcoT38I | GRGCYC | 1 cut(s) | 410 |
| ErhI | CCWWGG | 3 cut(s) | 46, 139, 942 |
| Esp3I | CGTCTC | 1 cut(s) | 982 |
| FaeI | CATG | 2 cut(s) | 73, 779 |
| FatI | CATG | 2 cut(s) | 69, 775 |
| FauI | CCCGC | 3 cut(s) | 22, 279, 581 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 13, 16, 145, 235, 335, 802 |
| FokI | GGATG | 2 cut(s) | 713, 769 |
| FriOI | GRGCYC | 1 cut(s) | 410 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 13, 16, 145, 235, 335, 802 |
| FspBI | CTAG | 1 cut(s) | 140 |
| GlaI | GCGC | 3 cut(s) | 164, 174, 210 |
| GluI | GCNGC | 7 cut(s) | 6, 13, 16, 145, 235, 335, 802 |
| GsuI | CTGGAG | 2 cut(s) | 118, 980 |
| HaeIII | GGCC | 8 cut(s) | 96, 370, 417, 422, 457, 614, 853, 948 |
| HapII | CCGG | 8 cut(s) | 97, 264, 275, 338, 395, 419, 615, 949 |
| HgaI | GACGC | 1 cut(s) | 185 |
| HhaI | GCGC | 3 cut(s) | 165, 175, 211 |
| Hin1II | CATG | 2 cut(s) | 73, 779 |
| Hin6I | GCGC | 3 cut(s) | 163, 173, 209 |
| HinP1I | GCGC | 3 cut(s) | 163, 173, 209 |
| HincII | GTYRAC | 1 cut(s) | 127 |
| HindII | GTYRAC | 1 cut(s) | 127 |
| HinfI | GANTC | 4 cut(s) | 177, 204, 287, 863 |
| HpaII | CCGG | 8 cut(s) | 97, 264, 275, 338, 395, 419, 615, 949 |
| HphI | GGTGA | 1 cut(s) | 352 |
| Hpy166II | GTNNAC | 4 cut(s) | 121, 127, 359, 790 |
| Hpy188I | TCNGA | 5 cut(s) | 224, 306, 311, 733, 844 |
| Hpy188III | TCNNGA | 2 cut(s) | 37, 860 |
| Hpy8I | GTNNAC | 4 cut(s) | 121, 127, 359, 790 |
| Hpy99I | CGWCG | 4 cut(s) | 118, 201, 204, 416 |
| HpyAV | CCTTC | 5 cut(s) | 308, 463, 554, 625, 636 |
| HpyCH4III | ACNGT | 4 cut(s) | 118, 584, 724, 879 |
| HpyCH4IV | ACGT | 1 cut(s) | 123 |
| HpyCH4V | TGCA | 2 cut(s) | 73, 685 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 35, 144, 259, 280, 289, 400, 414, 682, 898 |
| HpyF3I | CTNAG | 1 cut(s) | 902 |
| HpySE526I | ACGT | 1 cut(s) | 123 |
| Hsp92II | CATG | 2 cut(s) | 73, 779 |
| HspAI | GCGC | 3 cut(s) | 163, 173, 209 |
| KpnI | GGTACC | 1 cut(s) | 436 |
| Kzo9I | GATC | 3 cut(s) | 306, 655, 733 |
| LmnI | GCTCC | 4 cut(s) | 48, 258, 345, 617 |
| Lsp1109I | GCAGC | 5 cut(s) | 24, 27, 221, 321, 813 |
| LweI | GCATC | 3 cut(s) | 747, 813, 820 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MaeII | ACGT | 1 cut(s) | 123 |
| MaeIII | GTNAC | 1 cut(s) | 952 |
| MalI | GATC | 3 cut(s) | 308, 657, 735 |
| MboI | GATC | 3 cut(s) | 306, 655, 733 |
| MboII | GAAGA | 6 cut(s) | 65, 293, 478, 556, 559, 640 |
| MfeI | CAATTG | 1 cut(s) | 459 |
| MhlI | GDGCHC | 4 cut(s) | 255, 410, 452, 729 |
| MluCI | AATT | 1 cut(s) | 459 |
| MluI | ACGCGT | 1 cut(s) | 194 |
| MlyI | GAGTC | 2 cut(s) | 281, 872 |
| MslI | CAYNNNNRTG | 2 cut(s) | 389, 821 |
| MspI | CCGG | 8 cut(s) | 97, 264, 275, 338, 395, 419, 615, 949 |
| MspR9I | CCNGG | 7 cut(s) | 92, 264, 265, 419, 747, 855, 950 |
| MunI | CAATTG | 1 cut(s) | 459 |
| Mva1269I | GAATGC | 1 cut(s) | 348 |
| MvaI | CCWGG | 3 cut(s) | 92, 747, 855 |
| MvnI | CGCG | 6 cut(s) | 38, 163, 173, 175, 196, 209 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 35, 144, 259, 280, 289, 400, 414, 682, 898 |
| NciI | CCSGG | 4 cut(s) | 264, 265, 419, 950 |
| NdeII | GATC | 3 cut(s) | 306, 655, 733 |
| NlaIII | CATG | 2 cut(s) | 73, 779 |
| NlaIV | GGNNCC | 5 cut(s) | 269, 369, 393, 402, 434 |
| NmeAIII | GCCGAG | 3 cut(s) | 396, 429, 805 |
| NruI | TCGCGA | 1 cut(s) | 38 |
| NspI | RCATGY | 1 cut(s) | 73 |
| NspV | TTCGAA | 1 cut(s) | 60 |
| OliI | CACNNNNGTG | 2 cut(s) | 389, 821 |
| PaeR7I | CTCGAG | 2 cut(s) | 212, 819 |
| PaqCI | CACCTGC | 1 cut(s) | 267 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 237, 246 |
| PctI | GAATGC | 1 cut(s) | 348 |
| PfeI | GAWTC | 2 cut(s) | 177, 204 |
| PfoI | TCCNGGA | 1 cut(s) | 745 |
| PkrI | GCNGC | 7 cut(s) | 7, 14, 17, 146, 236, 336, 803 |
| PleI | GAGTC | 2 cut(s) | 281, 871 |
| PpsI | GAGTC | 2 cut(s) | 281, 871 |
| PpuMI | RGGWCCY | 2 cut(s) | 217, 295 |
| Psp5II | RGGWCCY | 2 cut(s) | 217, 295 |
| Psp6I | CCWGG | 3 cut(s) | 90, 745, 853 |
| PspGI | CCWGG | 3 cut(s) | 90, 745, 853 |
| PspN4I | GGNNCC | 5 cut(s) | 269, 369, 393, 402, 434 |
| PspPPI | RGGWCCY | 2 cut(s) | 217, 295 |
| PspXI | VCTCGAGB | 2 cut(s) | 212, 819 |
| PstNI | CAGNNNCTG | 1 cut(s) | 807 |
| RruI | TCGCGA | 1 cut(s) | 38 |
| RsaI | GTAC | 2 cut(s) | 434, 797 |
| RsaNI | GTAC | 2 cut(s) | 433, 796 |
| RseI | CAYNNNNRTG | 2 cut(s) | 389, 821 |
| SatI | GCNGC | 7 cut(s) | 6, 13, 16, 145, 235, 335, 802 |
| Sau3AI | GATC | 3 cut(s) | 306, 655, 733 |
| SchI | GAGTC | 2 cut(s) | 281, 872 |
| ScrFI | CCNGG | 7 cut(s) | 92, 264, 265, 419, 747, 855, 950 |
| SduI | GDGCHC | 4 cut(s) | 255, 410, 452, 729 |
| SfaNI | GCATC | 3 cut(s) | 747, 813, 820 |
| Sfr274I | CTCGAG | 2 cut(s) | 212, 819 |
| SfuI | TTCGAA | 1 cut(s) | 60 |
| SinI | GGWCC | 7 cut(s) | 217, 295, 359, 743, 790, 857, 939 |
| SlaI | CTCGAG | 2 cut(s) | 212, 819 |
| SmaI | CCCGGG | 1 cut(s) | 265 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 389, 821 |
| SmlI | CTYRAG | 2 cut(s) | 212, 819 |
| SmoI | CTYRAG | 2 cut(s) | 212, 819 |
| Sse9I | AATT | 1 cut(s) | 459 |
| SsiI | CCGC | 6 cut(s) | 5, 29, 144, 147, 272, 588 |
| SspMI | CTAG | 1 cut(s) | 140 |
| StyD4I | CCNGG | 7 cut(s) | 90, 262, 263, 417, 745, 853, 948 |
| StyI | CCWWGG | 3 cut(s) | 46, 139, 942 |
| TaaI | ACNGT | 4 cut(s) | 118, 584, 724, 879 |
| TaiI | ACGT | 1 cut(s) | 126 |
| TaqI | TCGA | 7 cut(s) | 60, 113, 202, 213, 285, 658, 820 |
| TasI | AATT | 1 cut(s) | 459 |
| TatI | WGTACW | 1 cut(s) | 795 |
| TauI | GCSGC | 2 cut(s) | 8, 147 |
| TfiI | GAWTC | 2 cut(s) | 177, 204 |
| TscAI | CASTG | 3 cut(s) | 457, 670, 963 |
| TseI | GCWGC | 5 cut(s) | 12, 15, 234, 334, 801 |
| TspDTI | ATGAA | 3 cut(s) | 167, 764, 978 |
| TspMI | CCCGGG | 1 cut(s) | 263 |
| TspRI | CASTG | 3 cut(s) | 457, 670, 963 |
| VpaK11BI | GGWCC | 7 cut(s) | 217, 295, 359, 743, 790, 857, 939 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 242 |
| XceI | RCATGY | 1 cut(s) | 73 |
| XhoI | CTCGAG | 2 cut(s) | 212, 819 |
| XmaI | CCCGGG | 1 cut(s) | 263 |
| XmaJI | CCTAGG | 1 cut(s) | 139 |
| XspI | CTAG | 1 cut(s) | 140 |