Prupe.8G198900_v2.0.a1

Forkhead associated domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
18915629 .. 18918068
2440 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G198900.1

Sequence Viewer

Length: 1005 bp
ATGGCGGCGACCAGCGGCGATGTGGAGGCTGGCTTCGCCAAGCTTCAAGGCGAAGACTTTGAGTACTACATGCAGACCTACTCCATAATCCTGGGCCGGAATTCCAAGAAATCAACGGTGGACGTCGACCTCTCGAGCCTCGGCGGCGGCATGAACATTTCGCGCCACCACGCGCGAATCTTCTACGATTTCACACGGCGCCGTTTCGCGCTCGAGGTCCTCGGCAAGAACGGCTGCCTCGTCGAGGGCGTGCTCCACCTTCCCGGAAACGCGCCGGTCAAGCTCGACTCGCAAGACCTTCTTCAGATCGGCGACAAGGAGTTCTATTTTCTGTTGCCGGTGAGGAGTATTCTCGGTGGGCCTGTGGGCCCCAGGCATTACGCCGCCTCGGTGGCGGTGCCGAGCCCCGTGGGCCCGGCTCATTACGGGTACCATTCGGGTTCGGGGACCGGGCCGATTGTGAAAAAGGGGAGGGGGAGGGAGTTTTATGAGGAGGAGTATGAGGAAGAGGAGGATGTTGGTGGTGGTGGTGGCGGTGGTGGGAGTGGGAGTGGGAAGAAGATGAGGAGAGAAGGGTATGAGGGTTTTGCGTATGGTGGTGGGTCGGGTTCTGGGTCAGGCAAGGCCGGAGCTTTGGAGAAGAAGGGAGATGGAAGATCAAGGGTTGATCGAGACACTGATAATCAGCAACTTCTGCATTTGGAGGAAAAGGATGTTGTGTCATCTGTTGCTACAGTGCTCTCTGATCTTTGTGGTCCTGGAGAATGGATGCCTATGGAGAAACTTCATACTGAGTTGGTCGAGCAGTATAGCAGCATTTGGCATCACACTCGAGTACGGCGGTATCTCACTTCTGAGGACTGGCCTGGCCCTGAGTCAAAAGGGAAACCATGGTACGGCTTGCTTATGTTGCTAAGAAAATACCCAGAACACTTTGTCATCAACACAAGGTCCAAGGGCCGTGTAACGCTGGAATTTGTTTCTCTTGTCTCTCTGCTTTCATAA

Protein Analysis

335

Amino Acids

36.51

Weight (kDa)

6.43

Isoelectric Point (pI)

54.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 126
Acc65I GGTACC 1 cut(s) 429
AccB1I GGYRCC 3 cut(s) 198, 397, 429
AccI GTMKAC 1 cut(s) 126
AccII CGCG 5 cut(s) 163, 173, 175, 209, 272
AciI CCGC 8 cut(s) 5, 15, 144, 147, 384, 395, 534, 841
AcsI RAATTY 2 cut(s) 100, 974
AcuI CTGAAG 1 cut(s) 287
AcyI GRCGYC 2 cut(s) 123, 199
AfaI GTAC 4 cut(s) 65, 431, 837, 896
AfiI CCNNNNNNNGG 2 cut(s) 244, 896
AgsI TTSAA 1 cut(s) 47
AjnI CCWGG 4 cut(s) 90, 371, 757, 865
AluBI AGCT 3 cut(s) 43, 283, 632
AluI AGCT 3 cut(s) 43, 283, 632
Alw21I GWGCWC 2 cut(s) 255, 741
Alw26I GTCTC 2 cut(s) 666, 994
Ama87I CYCGRG 3 cut(s) 133, 212, 831
AoxI GGCC 9 cut(s) 94, 359, 367, 412, 452, 624, 863, 868, 958
ApaI GGGCCC 2 cut(s) 371, 416
ApeKI GCWGC 2 cut(s) 234, 813
ApoI RAATTY 2 cut(s) 100, 974
Asp718I GGTACC 1 cut(s) 429
AspLEI GCGC 5 cut(s) 165, 175, 201, 211, 274
AsuC2I CCSGG 3 cut(s) 264, 416, 451
AsuHPI GGTGA 1 cut(s) 352
AvaI CYCGRG 3 cut(s) 133, 212, 831
AvaII GGWCC 4 cut(s) 217, 447, 755, 951
BaeGI GKGCMC 2 cut(s) 371, 416
BaeI ACNNNNGTAYC 2 cut(s) 827, 860
BanI GGYRCC 3 cut(s) 198, 397, 429
BanII GRGCYC 3 cut(s) 371, 407, 416
BbsI GAAGAC 1 cut(s) 60
Bbv12I GWGCWC 2 cut(s) 255, 741
BbvI GCAGC 2 cut(s) 221, 825
BccI CCATC 1 cut(s) 644
BceAI ACGGC 6 cut(s) 186, 212, 247, 854, 913, 945
BcgI CGANNNNNNTGC 2 cut(s) 812, 846
BciT130I CCWGG 4 cut(s) 92, 373, 759, 867
BcnI CCSGG 3 cut(s) 264, 416, 451
BcoDI GTCTC 2 cut(s) 666, 994
BfmI CTRYAG 1 cut(s) 732
BfoI RGCGCY 1 cut(s) 202
BglI GCCNNNNNGGC 3 cut(s) 144, 392, 411
BisI GCNGC 7 cut(s) 6, 16, 145, 148, 235, 384, 814
BlsI GCNGC 7 cut(s) 7, 17, 146, 149, 236, 385, 815
BmcAI AGTACT 1 cut(s) 65
Bme1390I CCNGG 7 cut(s) 92, 264, 373, 416, 451, 759, 867
Bme18I GGWCC 4 cut(s) 217, 447, 755, 951
BmeT110I CYCGRG 3 cut(s) 133, 212, 831
BmiI GGNNCC 7 cut(s) 200, 369, 370, 399, 414, 431, 448
BmrFI CCNGG 7 cut(s) 92, 264, 373, 416, 451, 759, 867
BmsI GCATC 2 cut(s) 759, 832
BpiI GAAGAC 1 cut(s) 60
BpmI CTGGAG 1 cut(s) 780
BpuMI CCSGG 3 cut(s) 264, 416, 451
BsaHI GRCGYC 2 cut(s) 123, 199
BsaJI CCNNGG 8 cut(s) 91, 139, 220, 371, 387, 408, 890, 954
BsaXI ACNNNNNCTCC 2 cut(s) 535, 565
Bsc4I CCNNNNNNNGG 2 cut(s) 244, 896
Bse118I RCCGGY 2 cut(s) 274, 337
Bse1I ACTGG 1 cut(s) 866
BseBI CCWGG 4 cut(s) 92, 373, 759, 867
BseDI CCNNGG 8 cut(s) 91, 139, 220, 371, 387, 408, 890, 954
BseGI GGATG 3 cut(s) 520, 718, 774
BseLI CCNNNNNNNGG 2 cut(s) 244, 896
BseMII CTCAG 3 cut(s) 783, 846, 864
BseNI ACTGG 1 cut(s) 866
BseRI GAGGAG 5 cut(s) 358, 506, 509, 524, 580
BseSI GKGCMC 2 cut(s) 371, 416
BseXI GCAGC 2 cut(s) 221, 825
Bsh1236I CGCG 5 cut(s) 163, 173, 175, 209, 272
BshFI GGCC 9 cut(s) 96, 361, 369, 414, 454, 626, 865, 870, 960
BshNI GGYRCC 3 cut(s) 198, 397, 429
BsiHKAI GWGCWC 2 cut(s) 255, 741
BsiHKCI CYCGRG 3 cut(s) 133, 212, 831
BsiSI CCGG 7 cut(s) 97, 264, 275, 338, 416, 450, 627
BslFI GGGAC 1 cut(s) 460
BslI CCNNNNNNNGG 2 cut(s) 244, 896
BsmAI GTCTC 2 cut(s) 666, 994
BsmFI GGGAC 1 cut(s) 460
BsnI GGCC 9 cut(s) 96, 361, 369, 414, 454, 626, 865, 870, 960
BsoBI CYCGRG 3 cut(s) 133, 212, 831
Bsp120I GGGCCC 2 cut(s) 367, 412
Bsp1286I GDGCHC 5 cut(s) 255, 371, 407, 416, 741
Bsp143I GATC 4 cut(s) 306, 656, 667, 745
Bsp19I CCATGG 1 cut(s) 890
BspACI CCGC 8 cut(s) 5, 15, 144, 147, 384, 395, 534, 841
BspANI GGCC 9 cut(s) 96, 361, 369, 414, 454, 626, 865, 870, 960
BspCNI CTCAG 3 cut(s) 784, 847, 865
BspFNI CGCG 5 cut(s) 163, 173, 175, 209, 272
BspLI GGNNCC 7 cut(s) 200, 369, 370, 399, 414, 431, 448
BspT107I GGYRCC 3 cut(s) 198, 397, 429
BsrFI RCCGGY 2 cut(s) 274, 337
BsrI ACTGG 1 cut(s) 866
BssAI RCCGGY 2 cut(s) 274, 337
BssECI CCNNGG 8 cut(s) 91, 139, 220, 371, 387, 408, 890, 954
BssMI GATC 4 cut(s) 306, 656, 667, 745
BssNI GRCGYC 2 cut(s) 123, 199
BssT1I CCWWGG 2 cut(s) 890, 954
Bst2UI CCWGG 4 cut(s) 92, 373, 759, 867
Bst4CI ACNGT 2 cut(s) 118, 736
Bst6I CTCTTC 1 cut(s) 501
BstACI GRCGYC 2 cut(s) 123, 199
BstAPI GCANNNNNTGC 1 cut(s) 694
BstC8I GCNNGC 3 cut(s) 31, 251, 902
BstDEI CTNAG 4 cut(s) 792, 855, 873, 914
BstDSI CCRYGG 2 cut(s) 408, 890
BstENI CCTNNNNNAGG 1 cut(s) 242
BstF5I GGATG 3 cut(s) 520, 718, 774
BstFNI CGCG 5 cut(s) 163, 173, 175, 209, 272
BstH2I RGCGCY 1 cut(s) 202
BstHHI GCGC 5 cut(s) 165, 175, 201, 211, 274
BstKTI GATC 4 cut(s) 309, 659, 670, 748
BstMAI GTCTC 2 cut(s) 666, 994
BstMBI GATC 4 cut(s) 306, 656, 667, 745
BstMWI GCNNNNNNNGC 9 cut(s) 35, 144, 231, 280, 289, 392, 411, 694, 910
BstNI CCWGG 4 cut(s) 92, 373, 759, 867
BstNSI RCATGY 1 cut(s) 73
BstSCI CCNGG 7 cut(s) 90, 262, 371, 414, 449, 757, 865
BstSFI CTRYAG 1 cut(s) 732
BstSLI GKGCMC 2 cut(s) 371, 416
BstUI CGCG 5 cut(s) 163, 173, 175, 209, 272
BstV1I GCAGC 2 cut(s) 221, 825
BstV2I GAAGAC 1 cut(s) 60
BstXI CCANNNNNNTGG 1 cut(s) 91
BsuRI GGCC 9 cut(s) 96, 361, 369, 414, 454, 626, 865, 870, 960
BtgI CCRYGG 2 cut(s) 408, 890
BtgZI GCGATG 1 cut(s) 33
BtsCI GGATG 3 cut(s) 520, 718, 774
BtsIMutI CAGTG 2 cut(s) 675, 741
Cac8I GCNNGC 3 cut(s) 31, 251, 902
CfoI GCGC 5 cut(s) 165, 175, 201, 211, 274
Cfr10I RCCGGY 2 cut(s) 274, 337
Csp6I GTAC 4 cut(s) 64, 430, 836, 895
CviAII CATG 3 cut(s) 70, 151, 891
CviQI GTAC 4 cut(s) 64, 430, 836, 895
DdeI CTNAG 4 cut(s) 792, 855, 873, 914
DinI GGCGCC 1 cut(s) 200
DpnI GATC 4 cut(s) 308, 658, 669, 747
DpnII GATC 4 cut(s) 306, 656, 667, 745
Eam1104I CTCTTC 1 cut(s) 501
EarI CTCTTC 1 cut(s) 501
Eco130I CCWWGG 2 cut(s) 890, 954
Eco24I GRGCYC 3 cut(s) 371, 407, 416
Eco47I GGWCC 4 cut(s) 217, 447, 755, 951
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 3 cut(s) 133, 212, 831
EcoNI CCTNNNNNAGG 1 cut(s) 242
EcoO109I RGGNCCY 2 cut(s) 217, 368
EcoRI GAATTC 1 cut(s) 100
EcoRII CCWGG 4 cut(s) 90, 371, 757, 865
EcoT14I CCWWGG 2 cut(s) 890, 954
EcoT38I GRGCYC 3 cut(s) 371, 407, 416
EgeI GGCGCC 1 cut(s) 200
EheI GGCGCC 1 cut(s) 200
ErhI CCWWGG 2 cut(s) 890, 954
FaeI CATG 3 cut(s) 73, 154, 894
FalI AAGNNNNNCTT 2 cut(s) 285, 317
FaqI GGGAC 1 cut(s) 460
FatI CATG 3 cut(s) 69, 150, 890
FblI GTMKAC 1 cut(s) 126
Fnu4HI GCNGC 7 cut(s) 6, 16, 145, 148, 235, 384, 814
FokI GGATG 3 cut(s) 527, 725, 781
FriOI GRGCYC 3 cut(s) 371, 407, 416
Fsp4HI GCNGC 7 cut(s) 6, 16, 145, 148, 235, 384, 814
GlaI GCGC 5 cut(s) 164, 174, 200, 210, 273
GluI GCNGC 7 cut(s) 6, 16, 145, 148, 235, 384, 814
GsuI CTGGAG 1 cut(s) 780
HaeII RGCGCY 1 cut(s) 202
HaeIII GGCC 9 cut(s) 96, 361, 369, 414, 454, 626, 865, 870, 960
HapII CCGG 7 cut(s) 97, 264, 275, 338, 416, 450, 627
HhaI GCGC 5 cut(s) 165, 175, 201, 211, 274
Hin1I GRCGYC 2 cut(s) 123, 199
Hin1II CATG 3 cut(s) 73, 154, 894
Hin6I GCGC 5 cut(s) 163, 173, 199, 209, 272
HinP1I GCGC 5 cut(s) 163, 173, 199, 209, 272
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HindIII AAGCTT 1 cut(s) 41
HinfI GANTC 3 cut(s) 177, 287, 875
HpaII CCGG 7 cut(s) 97, 264, 275, 338, 416, 450, 627
HphI GGTGA 1 cut(s) 352
Hpy166II GTNNAC 2 cut(s) 121, 127
Hpy188I TCNGA 3 cut(s) 306, 745, 856
Hpy188III TCNNGA 2 cut(s) 133, 671
Hpy8I GTNNAC 2 cut(s) 121, 127
Hpy99I CGWCG 2 cut(s) 128, 245
HpyAV CCTTC 4 cut(s) 269, 308, 566, 637
HpyCH4III ACNGT 2 cut(s) 118, 736
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 2 cut(s) 73, 697
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 144, 231, 280, 289, 392, 411, 694, 910
HpyF3I CTNAG 4 cut(s) 792, 855, 873, 914
HpySE526I ACGT 1 cut(s) 123
Hsp92I GRCGYC 2 cut(s) 123, 199
Hsp92II CATG 3 cut(s) 73, 154, 894
HspAI GCGC 5 cut(s) 163, 173, 199, 209, 272
KasI GGCGCC 1 cut(s) 198
KpnI GGTACC 1 cut(s) 433
Kzo9I GATC 4 cut(s) 306, 656, 667, 745
LmnI GCTCC 2 cut(s) 258, 629
Lsp1109I GCAGC 2 cut(s) 221, 825
LweI GCATC 2 cut(s) 759, 832
MaeII ACGT 1 cut(s) 123
MaeIII GTNAC 1 cut(s) 964
MalI GATC 4 cut(s) 308, 658, 669, 747
MboI GATC 4 cut(s) 306, 656, 667, 745
MboII GAAGA 8 cut(s) 65, 172, 293, 518, 568, 571, 652, 666
MhlI GDGCHC 5 cut(s) 255, 371, 407, 416, 741
MluCI AATT 2 cut(s) 100, 974
Mly113I GGCGCC 1 cut(s) 199
MlyI GAGTC 2 cut(s) 281, 884
MspA1I CMGCKG 1 cut(s) 15
MspI CCGG 7 cut(s) 97, 264, 275, 338, 416, 450, 627
MspR9I CCNGG 7 cut(s) 92, 264, 373, 416, 451, 759, 867
MvaI CCWGG 4 cut(s) 92, 373, 759, 867
MvnI CGCG 5 cut(s) 163, 173, 175, 209, 272
MwoI GCNNNNNNNGC 9 cut(s) 35, 144, 231, 280, 289, 392, 411, 694, 910
NarI GGCGCC 1 cut(s) 199
NciI CCSGG 3 cut(s) 264, 416, 451
NcoI CCATGG 1 cut(s) 890
NdeII GATC 4 cut(s) 306, 656, 667, 745
NlaIII CATG 3 cut(s) 73, 154, 894
NlaIV GGNNCC 7 cut(s) 200, 369, 370, 399, 414, 431, 448
NmeAIII GCCGAG 3 cut(s) 120, 201, 426
NspI RCATGY 1 cut(s) 73
PaeR7I CTCGAG 3 cut(s) 133, 212, 831
PcsI WCGNNNNNNNCGW 2 cut(s) 237, 246
PfeI GAWTC 1 cut(s) 177
PfoI TCCNGGA 2 cut(s) 262, 757
PkrI GCNGC 7 cut(s) 7, 17, 146, 149, 236, 385, 815
PleI GAGTC 2 cut(s) 281, 883
PluTI GGCGCC 1 cut(s) 202
PpsI GAGTC 2 cut(s) 281, 883
PpuMI RGGWCCY 1 cut(s) 217
Psp5II RGGWCCY 1 cut(s) 217
Psp6I CCWGG 4 cut(s) 90, 371, 757, 865
PspGI CCWGG 4 cut(s) 90, 371, 757, 865
PspN4I GGNNCC 7 cut(s) 200, 369, 370, 399, 414, 431, 448
PspOMI GGGCCC 2 cut(s) 367, 412
PspPPI RGGWCCY 1 cut(s) 217
PspXI VCTCGAGB 2 cut(s) 212, 831
RsaI GTAC 4 cut(s) 65, 431, 837, 896
RsaNI GTAC 4 cut(s) 64, 430, 836, 895
SalI GTCGAC 1 cut(s) 125
SatI GCNGC 7 cut(s) 6, 16, 145, 148, 235, 384, 814
Sau3AI GATC 4 cut(s) 306, 656, 667, 745
ScaI AGTACT 1 cut(s) 65
SchI GAGTC 2 cut(s) 281, 884
ScrFI CCNGG 7 cut(s) 92, 264, 373, 416, 451, 759, 867
SduI GDGCHC 5 cut(s) 255, 371, 407, 416, 741
SfaNI GCATC 2 cut(s) 759, 832
SfcI CTRYAG 1 cut(s) 732
SfoI GGCGCC 1 cut(s) 200
Sfr274I CTCGAG 3 cut(s) 133, 212, 831
SinI GGWCC 4 cut(s) 217, 447, 755, 951
SlaI CTCGAG 3 cut(s) 133, 212, 831
SmlI CTYRAG 3 cut(s) 133, 212, 831
SmoI CTYRAG 3 cut(s) 133, 212, 831
Sse9I AATT 2 cut(s) 100, 974
SsiI CCGC 8 cut(s) 5, 15, 144, 147, 384, 395, 534, 841
SspDI GGCGCC 1 cut(s) 198
StyD4I CCNGG 7 cut(s) 90, 262, 371, 414, 449, 757, 865
StyI CCWWGG 2 cut(s) 890, 954
TaaI ACNGT 2 cut(s) 118, 736
TaiI ACGT 1 cut(s) 126
TaqI TCGA 8 cut(s) 126, 134, 213, 243, 285, 670, 801, 832
TasI AATT 2 cut(s) 100, 974
TatI WGTACW 1 cut(s) 63
TauI GCSGC 5 cut(s) 8, 18, 147, 150, 386
TfiI GAWTC 1 cut(s) 177
TscAI CASTG 2 cut(s) 682, 741
TseI GCWGC 2 cut(s) 234, 813
TspDTI ATGAA 3 cut(s) 167, 776, 990
TspRI CASTG 2 cut(s) 682, 741
VpaK11BI GGWCC 4 cut(s) 217, 447, 755, 951
XagI CCTNNNNNAGG 1 cut(s) 242
XapI RAATTY 2 cut(s) 100, 974
XceI RCATGY 1 cut(s) 73
XcmI CCANNNNNNNNNTGG 1 cut(s) 19
XhoI CTCGAG 3 cut(s) 133, 212, 831
XmiI GTMKAC 1 cut(s) 126
ZraI GACGTC 1 cut(s) 124
ZrmI AGTACT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.