Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001537

Physical Location & Seq

Genomic Coordinates Forward (+)

15093851 .. 15096103

Gene Structure 2253 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0162600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGTTAACCTGAACCCTATCTCTCACCTCATTCTTCACCTTTTGCTCTTGCTATTTTTAGCTTCTTCATGTTCGGGGCATGGAGTTCCAGATTCATGCTTCGAGGAAGAGAGACAAGCTCTTCTCAACTTCAAACATGATCTTGCCGATCTTTCTGGCAGGCCTTCTAGCAGGCTTTCTTCTTGGGTGGGTCATGCATGCTGTCAATGGCAAGGAATTTCATGCAACAACCGAACTGGTCATGTTGAAAAGATGGACCTCCGAAATACATATCCAGATACCCACTATGAGGTTTGGAACGACACAGAGTATAACCAATCCTTTTTAGTGGGTAAGATGAATCATTCTTTGCTTTGCTTAAAACATTTATCTTACTTAGATCTAAGCTGGAACTATTTTCAAGGGGTTCACATCCCCAAGTTCATTAGGCAGCTTACGAGTTTGACTTATCTCAATCTCTCAAATTCCTACTTTGCCGGAGAGATTCCGTCATCTCTCGGTAACCTCTCAAACTTGAAATATTTAGACCTCAAATCTATTTATGGCGGTGTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCACTTCCCTAAAATACCTCAATCTTAGATATGTGAACCTTAGCAGCACTAGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTTCTTTCCAAATTGATGGAAACCAGCTTCCACTCTCCCTGCCCACAATTAACTTCACATCACTTTTGGTCCTTCATATGTCTTCCAATGTTATTGATTCTTCATTCCCCACATGGCTTTTAAATCTTACTAGCCTCAAATCCCTCGAACACCTAGACTTATCTTCTATGTATCTCCAAGGTCAAATTCCTCAAGGTATTGGACATCTGTGCAAGCTAAAGATGTTAAATCTTGGGTACAACCAATTTAGCGGAGGTCTTCAAGAGATTTTGAGTGGTTTCTCAAATTGTCGAGATAATGGGGGGATGGTAAGTGAATTGCAGCATCTTGACCTCAGTTCCAACTCTTTTTCTGGATCATTTCCAGAATCTTTTCAACACTTATCATCCTTGAAAACACTGGACCTCTCTTATAATAGTATGAACGGTTCCATTATTCCTCAAATTTTGGGACAACTCTCTCAGCTAGTTGATCTAGATCTGTCTAGGAATCCATGGAACGGAATTCTAACGGAAGCGCATCTCATGAACCTCAGGAGATTGGAGACATTTCGAATAGGCACAGACAGACCTGCTTTGTCATCATCCCTCATTTTCAATGTGACTGATGACTGGGTTCCCCCATTCAACCTCAGCGAAGTTTACATTCAAAACTGCAGAGTGGGTCCTGCGTTTCCGGTATGGCTTCGATCTCAAACTCAACTAGTTGATGTCCGCCTTGACAATACTGGAATTTCTGATCGAATACCTGAGGAATGGCTCTTGAAGATATCTTCACAGGTTGAATTCTTGTATTTACCTAACAATGGCAATGGTGGAAAACTTCCCTTCCAATTCAAGTTTCCGAATATAATTCTCATAGATTTGCGTCACAATCAATTTGAAGGCACACTCCAGCAGCTTTTGCCCACTAATATGCCTCTATTAGGAGGCTTGTTTCTTTCTGATAATCATTTGAAAGGAACTATTCCACCTTCAATTTGGCAAGTGCAACATATGAAAATCCTTTCTCTCAGGAACAATCAATTGTCCGGAGAGTTTCCTCAAGAATGGAGTCTGTGGAGCGAAATACGTATCGTGGATGTCTCAAACAACAATCTCTCTGGTAATATTCCCAGTTCAATGGGCATCCCATGTTCTCTTTCAGTTTTGAAGATGCACAACAATCATTTTGGAGGAGAAATTCCTTCTCTCTTGCAAAATTGCTCTGCTTTGATTGATATTGACCTGAGTGGCAACAAACTCACTGGAATCCTGCCTATATGGATAGGGTCAAAGCTTTCTTATTTGGAGTATGTACTATTGCGACGTAATTTTTTAAGCGGAAATATTCCCGAACAGTTGTGTAATCTTCAATACCTTCATATCCCAGACCTTGGCCATAACAACATTTCAGGGACTATTCCCACATGTTTGAGTAATTTGACTGCTATGCAGTATGAGGGGGTCGATTTTTTAGGCTTCATGGATTACGACGAGTTAACAGCAGTTATCATGAAAGGAAGAGAACTTGAATATAGCAGTGATCATACATTGCTTTTGGTAAAGAGCATTGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0006355 GO:0006357 GO:0008150 GO:0009653 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043565 GO:0044212 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

750

Amino Acids

84.48

Weight (kDa)

5.91

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 76	6.2e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	117 - 201	9.3e-07	Leucine-rich repeat region
LRR_14	PF23598	191 - 315	5.2e-08	Leucine-rich repeat region
LRR_8	PF13855	336 - 395	4.7e-11	Leucine rich repeat
LRR_14	PF23598	337 - 462	6.3e-07	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001537)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07260
prunus_persica	Prupe.7G068100_v2.0.a1 Prupe.7G068200_v2.0.a1 Prupe.8G198900_v2.0.a1
pyrus_communis	pycom14g05340 pycom14g05350 pycom14g05360
rosa_chinensis	RchiOBHm_Chr1g0319631 RchiOBHm_Chr3g0480971 RchiOBHm_Chr3g0480981 RchiOBHm_Chr5g0045161 RchiOBHm_Chr5g0045171 RchiOBHm_Chr5g0072291 RchiOBHm_Chr6g0245631
rosa_laevigata	RLG00000013572 RLG00000015457 RLG00000023437
rosa_multiflora	Rmu_co8060674.1_g000001 Rmu_sc0002402.1_g000001 Rmu_sc0022780.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032470 Rroxscaffold_6G00400780
rosa_rugosa	Rorug01G0028900 Rorug03G0188600 Rorug03G0335300 Rorug05G0162600 Rorug05G0246700
rosa_samantha	Rh1AG040600 Rh1AG078700 Rh1AG105700 Rh1BG037800 Rh2BG235700 Rh3AG239400 Rh3BG273900 Rh3BG294200 Rh3CG269400 Rh3DG265400 Rh3DG277600 Rh3DG283600 Rh4AG236400 Rh5BG311000 Rh5BG311100 Rh5BG311200 Rh5BG488800 Rh5CG512600 Rh6AG273500 Rh6CG275600 Rh6DG268700 Rh7AG445900
rosa_wichuraiana	Rw2G031500 Rw4G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1104
Acc36I	ACCTGC	1 cut(s)	1270
AccB7I	CCANNNNNTGG	1 cut(s)	2066
AccIII	TCCGGA	1 cut(s)	1721
AciI	CCGC	4 cut(s)	546, 942, 1405, 2013
AclWI	GGATC	1 cut(s)	1054
AcoI	YGGCCR	1 cut(s)	2068
AcsI	RAATTY	8 cut(s)	216, 463, 876, 1134, 1194, 1422, 1475, 1872
AfaI	GTAC	2 cut(s)	929, 1989
AfiI	CCNNNNNNNGG	5 cut(s)	289, 1190, 1496, 1616, 2066
AflIII	ACRYGT	1 cut(s)	2099
AhlI	ACTAGT	1 cut(s)	1393
AjuI	GAANNNNNNNTTGG	4 cut(s)	861, 893, 1515, 1547
AluBI	AGCT	9 cut(s)	62, 119, 387, 433, 718, 907, 1156, 1591, 1969
AluI	AGCT	9 cut(s)	62, 119, 387, 433, 718, 907, 1156, 1591, 1969
Alw26I	GTCTC	3 cut(s)	106, 1229, 1780
AlwI	GGATC	1 cut(s)	1054
Aor13HI	TCCGGA	1 cut(s)	1721
AoxI	GGCC	2 cut(s)	161, 2068
ApeKI	GCWGC	4 cut(s)	430, 627, 1012, 1588
ApoI	RAATTY	8 cut(s)	216, 463, 876, 1134, 1194, 1422, 1475, 1872
Asp700I	GAANNNNTTC	1 cut(s)	1062
AspLEI	GCGC	1 cut(s)	1210
AspS9I	GGNCC	4 cut(s)	256, 760, 1093, 1355
AsuHPI	GGTGA	2 cut(s)	17, 29
AsuII	TTCGAA	1 cut(s)	1243
AvaII	GGWCC	4 cut(s)	256, 760, 1093, 1355
AxyI	CCTNAGG	2 cut(s)	1223, 1440
BalI	TGGCCA	1 cut(s)	2070
BbsI	GAAGAC	3 cut(s)	684, 765, 941
BbvCI	CCTCAGC	1 cut(s)	1322
BbvI	GCAGC	4 cut(s)	442, 639, 1024, 1600
BccI	CCATC	3 cut(s)	247, 701, 991
BclI	TGATCA	1 cut(s)	2215
BcoDI	GTCTC	3 cut(s)	106, 1229, 1780
BcuI	ACTAGT	1 cut(s)	1393
BfaI	CTAG	8 cut(s)	168, 633, 822, 845, 1157, 1166, 1176, 1394
BfmI	CTRYAG	1 cut(s)	1345
BfuAI	ACCTGC	1 cut(s)	1270
BglII	AGATCT	2 cut(s)	379, 1168
BisI	GCNGC	4 cut(s)	431, 628, 1013, 1589
BlsI	GCNGC	4 cut(s)	432, 629, 1014, 1590
Bme18I	GGWCC	4 cut(s)	256, 760, 1093, 1355
BmgT120I	GGNCC	4 cut(s)	256, 760, 1093, 1355
BmiI	GGNNCC	3 cut(s)	1120, 1308, 1356
BmrI	ACTGGG	2 cut(s)	1312, 1800
BmsI	GCATC	4 cut(s)	1024, 1219, 1827, 1836
BmuI	ACTGGG	2 cut(s)	1312, 1800
BpiI	GAAGAC	3 cut(s)	684, 765, 941
BplI	GAGNNNNNCTC	2 cut(s)	103, 135
BpmI	CTGGAG	1 cut(s)	1568
Bpu10I	CCTNAGC	2 cut(s)	623, 1322
Bpu14I	TTCGAA	1 cut(s)	1243
BpuEI	CTTGAG	2 cut(s)	867, 1719
BsaAI	YACGTR	1 cut(s)	1763
BsaBI	GATNNNNATC	1 cut(s)	1167
BsaJI	CCNNGG	3 cut(s)	868, 1184, 2065
BsaWI	WCCGGW	2 cut(s)	1366, 1721
Bsc4I	CCNNNNNNNGG	5 cut(s)	289, 1190, 1496, 1616, 2066
Bse1I	ACTGG	6 cut(s)	241, 1095, 1307, 1423, 1806, 1942
Bse21I	CCTNAGG	2 cut(s)	1223, 1440
Bse3DI	GCAATG	2 cut(s)	1507, 2222
Bse8I	GATNNNNATC	1 cut(s)	1167
BseAI	TCCGGA	1 cut(s)	1721
BseDI	CCNNGG	3 cut(s)	868, 1184, 2065
BseGI	GGATG	6 cut(s)	411, 1002, 1076, 1274, 1777, 1818
BseJI	GATNNNNATC	1 cut(s)	1167
BseLI	CCNNNNNNNGG	5 cut(s)	289, 1190, 1496, 1616, 2066
BseMI	GCAATG	2 cut(s)	1507, 2222
BseMII	CTCAG	7 cut(s)	1039, 1166, 1237, 1336, 1431, 1717, 1910
BseNI	ACTGG	6 cut(s)	241, 1095, 1307, 1423, 1806, 1942
BseRI	GAGGAG	1 cut(s)	1881
BseXI	GCAGC	4 cut(s)	442, 639, 1024, 1600
BshFI	GGCC	2 cut(s)	163, 2070
BsiSI	CCGG	3 cut(s)	477, 1367, 1722
BslFI	GGGAC	2 cut(s)	1155, 2101
BslI	CCNNNNNNNGG	5 cut(s)	289, 1190, 1496, 1616, 2066
BsmAI	GTCTC	3 cut(s)	106, 1229, 1780
BsmFI	GGGAC	2 cut(s)	1155, 2101
BsnI	GGCC	2 cut(s)	163, 2070
Bsp119I	TTCGAA	1 cut(s)	1243
Bsp13I	TCCGGA	1 cut(s)	1721
Bsp143I	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
Bsp19I	CCATGG	1 cut(s)	1184
BspACI	CCGC	4 cut(s)	546, 942, 1405, 2013
BspANI	GGCC	2 cut(s)	163, 2070
BspCNI	CTCAG	7 cut(s)	1038, 1165, 1236, 1335, 1432, 1716, 1911
BspEI	TCCGGA	1 cut(s)	1721
BspHI	TCATGA	2 cut(s)	1215, 2184
BspLI	GGNNCC	3 cut(s)	1120, 1308, 1356
BspMAI	CTGCAG	1 cut(s)	1349
BspMI	ACCTGC	1 cut(s)	1270
BspPI	GGATC	1 cut(s)	1054
BspQI	GCTCTTC	1 cut(s)	126
BspT104I	TTCGAA	1 cut(s)	1243
BsrDI	GCAATG	2 cut(s)	1507, 2222
BsrI	ACTGG	6 cut(s)	241, 1095, 1307, 1423, 1806, 1942
BssECI	CCNNGG	3 cut(s)	868, 1184, 2065
BssMI	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
BssT1I	CCWWGG	3 cut(s)	868, 1184, 2065
Bst4CI	ACNGT	2 cut(s)	1118, 2031
Bst6I	CTCTTC	3 cut(s)	102, 126, 2188
BstAPI	GCANNNNNTGC	1 cut(s)	1594
BstBAI	YACGTR	1 cut(s)	1763
BstBI	TTCGAA	1 cut(s)	1243
BstC8I	GCNNGC	4 cut(s)	161, 173, 199, 905
BstDSI	CCRYGG	1 cut(s)	1184
BstEII	GGTNACC	1 cut(s)	500
BstENI	CCTNNNNNAGG	1 cut(s)	1614
BstF5I	GGATG	6 cut(s)	411, 1002, 1076, 1274, 1777, 1818
BstHHI	GCGC	1 cut(s)	1210
BstKTI	GATC	9 cut(s)	142, 151, 382, 1049, 1165, 1171, 1382, 1432, 2218
BstMAI	GTCTC	3 cut(s)	106, 1229, 1780
BstMBI	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
BstMWI	GCNNNNNNNGC	1 cut(s)	1594
BstNSI	RCATGY	3 cut(s)	201, 664, 2103
BstPI	GGTNACC	1 cut(s)	500
BstSFI	CTRYAG	1 cut(s)	1345
BstSNI	TACGTA	1 cut(s)	1763
BstV1I	GCAGC	4 cut(s)	442, 639, 1024, 1600
BstV2I	GAAGAC	3 cut(s)	684, 765, 941
BstX2I	RGATCY	2 cut(s)	379, 1168
BstXI	CCANNNNNNTGG	2 cut(s)	707, 1813
BstYI	RGATCY	2 cut(s)	379, 1168
Bsu36I	CCTNAGG	2 cut(s)	1223, 1440
BsuRI	GGCC	2 cut(s)	163, 2070
BtgI	CCRYGG	1 cut(s)	1184
BtsCI	GGATG	6 cut(s)	411, 1002, 1076, 1274, 1777, 1818
BtsI	GCAGTG	1 cut(s)	2218
BtsIMutI	CAGTG	3 cut(s)	1088, 1935, 2218
BveI	ACCTGC	1 cut(s)	1270
Cac8I	GCNNGC	4 cut(s)	161, 173, 199, 905
CciI	TCATGA	2 cut(s)	1215, 2184
CfoI	GCGC	1 cut(s)	1210
Cfr13I	GGNCC	4 cut(s)	256, 760, 1093, 1355
CseI	GACGC	1 cut(s)	1547
Csp6I	GTAC	2 cut(s)	928, 1988
CviQI	GTAC	2 cut(s)	928, 1988
DpnI	GATC	9 cut(s)	141, 150, 381, 1048, 1164, 1170, 1381, 1431, 2217
DpnII	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
DraI	TTTAAA	1 cut(s)	813
EaeI	YGGCCR	1 cut(s)	2068
Eam1104I	CTCTTC	3 cut(s)	102, 126, 2188
EarI	CTCTTC	3 cut(s)	102, 126, 2188
EciI	GGCGGA	1 cut(s)	1394
Eco105I	TACGTA	1 cut(s)	1763
Eco130I	CCWWGG	3 cut(s)	868, 1184, 2065
Eco147I	AGGCCT	1 cut(s)	163
Eco32I	GATATC	1 cut(s)	1461
Eco47I	GGWCC	4 cut(s)	256, 760, 1093, 1355
Eco81I	CCTNAGG	2 cut(s)	1223, 1440
Eco91I	GGTNACC	1 cut(s)	500
EcoNI	CCTNNNNNAGG	1 cut(s)	1614
EcoO109I	RGGNCCY	1 cut(s)	1355
EcoO65I	GGTNACC	1 cut(s)	500
EcoRI	GAATTC	2 cut(s)	1194, 1475
EcoRV	GATATC	1 cut(s)	1461
EcoT14I	CCWWGG	3 cut(s)	868, 1184, 2065
EcoT22I	ATGCAT	1 cut(s)	199
ErhI	CCWWGG	3 cut(s)	868, 1184, 2065
FaqI	GGGAC	2 cut(s)	1155, 2101
FauNDI	CATATG	2 cut(s)	768, 1686
FbaI	TGATCA	1 cut(s)	2215
Fnu4HI	GCNGC	4 cut(s)	431, 628, 1013, 1589
FokI	GGATG	6 cut(s)	398, 1009, 1063, 1261, 1784, 1805
Fsp4HI	GCNGC	4 cut(s)	431, 628, 1013, 1589
FspBI	CTAG	8 cut(s)	168, 633, 822, 845, 1157, 1166, 1176, 1394
GlaI	GCGC	1 cut(s)	1209
GluI	GCNGC	4 cut(s)	431, 628, 1013, 1589
GsuI	CTGGAG	1 cut(s)	1568
HaeIII	GGCC	2 cut(s)	163, 2070
HapII	CCGG	3 cut(s)	477, 1367, 1722
HgaI	GACGC	1 cut(s)	1547
HhaI	GCGC	1 cut(s)	1210
Hin6I	GCGC	1 cut(s)	1208
HinP1I	GCGC	1 cut(s)	1208
HincII	GTYRAC	3 cut(s)	7, 658, 2172
HindII	GTYRAC	3 cut(s)	7, 658, 2172
HindIII	AAGCTT	1 cut(s)	1967
HinfI	GANTC	8 cut(s)	92, 340, 484, 788, 1058, 1180, 1744, 1941
HpaI	GTTAAC	2 cut(s)	7, 2172
HpaII	CCGG	3 cut(s)	477, 1367, 1722
HphI	GGTGA	2 cut(s)	17, 29
Hpy166II	GTNNAC	6 cut(s)	7, 409, 619, 658, 1333, 2172
Hpy188I	TCNGA	4 cut(s)	263, 1429, 1536, 1636
Hpy8I	GTNNAC	6 cut(s)	7, 409, 619, 658, 1333, 2172
Hpy99I	CGWCG	2 cut(s)	2001, 2168
HpyAV	CCTTC	8 cut(s)	174, 678, 773, 1528, 1568, 1674, 1887, 2060
HpyCH4III	ACNGT	2 cut(s)	1118, 2031
HpyCH4IV	ACGT	2 cut(s)	1762, 1999
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1594
HpySE526I	ACGT	2 cut(s)	1762, 1999
HspAI	GCGC	1 cut(s)	1208
Kpn2I	TCCGGA	1 cut(s)	1721
Ksp22I	TGATCA	1 cut(s)	2215
KspAI	GTTAAC	2 cut(s)	7, 2172
Kzo9I	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
LguI	GCTCTTC	1 cut(s)	126
LmnI	GCTCC	1 cut(s)	1752
Lsp1109I	GCAGC	4 cut(s)	442, 639, 1024, 1600
LweI	GCATC	4 cut(s)	1024, 1219, 1827, 1836
MaeI	CTAG	8 cut(s)	168, 633, 822, 845, 1157, 1166, 1176, 1394
MaeII	ACGT	2 cut(s)	1762, 1999
MaeIII	GTNAC	3 cut(s)	500, 1291, 1559
MalI	GATC	9 cut(s)	141, 150, 381, 1048, 1164, 1170, 1381, 1431, 2217
MboI	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
MfeI	CAATTG	1 cut(s)	1715
MflI	RGATCY	2 cut(s)	379, 1168
MlsI	TGGCCA	1 cut(s)	2070
MluNI	TGGCCA	1 cut(s)	2070
MlyI	GAGTC	1 cut(s)	1753
MmeI	TCCRAC	1 cut(s)	1056
Mox20I	TGGCCA	1 cut(s)	2070
Mph1103I	ATGCAT	1 cut(s)	199
MroI	TCCGGA	1 cut(s)	1721
MroXI	GAANNNNTTC	1 cut(s)	1062
MscI	TGGCCA	1 cut(s)	2070
MseI	TTAA	7 cut(s)	6, 359, 741, 812, 917, 2009, 2171
MslI	CAYNNNNRTG	1 cut(s)	1604
Msp20I	TGGCCA	1 cut(s)	2070
MspI	CCGG	3 cut(s)	477, 1367, 1722
MunI	CAATTG	1 cut(s)	1715
MwoI	GCNNNNNNNGC	1 cut(s)	1594
NcoI	CCATGG	1 cut(s)	1184
NdeI	CATATG	2 cut(s)	768, 1686
NdeII	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
NlaIV	GGNNCC	3 cut(s)	1120, 1308, 1356
NmuCI	GTSAC	2 cut(s)	1291, 1559
NsiI	ATGCAT	1 cut(s)	199
NspI	RCATGY	3 cut(s)	201, 664, 2103
NspV	TTCGAA	1 cut(s)	1243
PaeI	GCATGC	1 cut(s)	201
PagI	TCATGA	2 cut(s)	1215, 2184
PceI	AGGCCT	1 cut(s)	163
PciI	ACATGT	1 cut(s)	2099
PciSI	GCTCTTC	1 cut(s)	126
PdmI	GAANNNNTTC	1 cut(s)	1062
PfeI	GAWTC	7 cut(s)	92, 340, 484, 788, 1058, 1180, 1941
PflMI	CCANNNNNTGG	1 cut(s)	2066
PkrI	GCNGC	4 cut(s)	432, 629, 1014, 1590
PleI	GAGTC	1 cut(s)	1752
PpsI	GAGTC	1 cut(s)	1752
Ppu21I	YACGTR	1 cut(s)	1763
PpuMI	RGGWCCY	1 cut(s)	1355
PscI	ACATGT	1 cut(s)	2099
PsiI	TTATAA	1 cut(s)	1104
Psp5II	RGGWCCY	1 cut(s)	1355
PspEI	GGTNACC	1 cut(s)	500
PspN4I	GGNNCC	3 cut(s)	1120, 1308, 1356
PspPI	GGNCC	4 cut(s)	256, 760, 1093, 1355
PspPPI	RGGWCCY	1 cut(s)	1355
PsrI	GAACNNNNNNTAC	2 cut(s)	1102, 1134
PstI	CTGCAG	1 cut(s)	1349
PsuI	RGATCY	2 cut(s)	379, 1168
RsaI	GTAC	2 cut(s)	929, 1989
RsaNI	GTAC	2 cut(s)	928, 1988
RseI	CAYNNNNRTG	1 cut(s)	1604
SapI	GCTCTTC	1 cut(s)	126
SaqAI	TTAA	7 cut(s)	6, 359, 741, 812, 917, 2009, 2171
SatI	GCNGC	4 cut(s)	431, 628, 1013, 1589
Sau3AI	GATC	9 cut(s)	139, 148, 379, 1046, 1162, 1168, 1379, 1429, 2215
Sau96I	GGNCC	4 cut(s)	256, 760, 1093, 1355
SchI	GAGTC	1 cut(s)	1753
SfaNI	GCATC	4 cut(s)	1024, 1219, 1827, 1836
SfcI	CTRYAG	1 cut(s)	1345
SfuI	TTCGAA	1 cut(s)	1243
SinI	GGWCC	4 cut(s)	256, 760, 1093, 1355
SmiMI	CAYNNNNRTG	1 cut(s)	1604
SmlI	CTYRAG	2 cut(s)	882, 1734
SmoI	CTYRAG	2 cut(s)	882, 1734
SnaBI	TACGTA	1 cut(s)	1763
SpeI	ACTAGT	1 cut(s)	1393
SphI	GCATGC	1 cut(s)	201
SseBI	AGGCCT	1 cut(s)	163
SsiI	CCGC	4 cut(s)	546, 942, 1405, 2013
SspI	AATATT	3 cut(s)	521, 1801, 2020
SspMI	CTAG	8 cut(s)	168, 633, 822, 845, 1157, 1166, 1176, 1394
StuI	AGGCCT	1 cut(s)	163
StyI	CCWWGG	3 cut(s)	868, 1184, 2065
TaaI	ACNGT	2 cut(s)	1118, 2031
TaiI	ACGT	2 cut(s)	1765, 2002
TaqI	TCGA	7 cut(s)	102, 837, 982, 1243, 1378, 1432, 2139
TatI	WGTACW	1 cut(s)	1987
TfiI	GAWTC	7 cut(s)	92, 340, 484, 788, 1058, 1180, 1941
Tru1I	TTAA	7 cut(s)	6, 359, 741, 812, 917, 2009, 2171
Tru9I	TTAA	7 cut(s)	6, 359, 741, 812, 917, 2009, 2171
TscAI	CASTG	3 cut(s)	1095, 1942, 2218
TseFI	GTSAC	2 cut(s)	1291, 1559
TseI	GCWGC	4 cut(s)	430, 627, 1012, 1588
Tsp45I	GTSAC	2 cut(s)	1291, 1559
TspGWI	ACGGA	3 cut(s)	477, 1206, 1217
TspRI	CASTG	3 cut(s)	1095, 1942, 2218
Van91I	CCANNNNNTGG	1 cut(s)	2066
VpaK11BI	GGWCC	4 cut(s)	256, 760, 1093, 1355
XagI	CCTNNNNNAGG	1 cut(s)	1614
XapI	RAATTY	8 cut(s)	216, 463, 876, 1134, 1194, 1422, 1475, 1872
XbaI	TCTAGA	1 cut(s)	1165
XceI	RCATGY	3 cut(s)	201, 664, 2103
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1668
XmnI	GAANNNNTTC	1 cut(s)	1062
XspI	CTAG	8 cut(s)	168, 633, 822, 845, 1157, 1166, 1176, 1394
Zsp2I	ATGCAT	1 cut(s)	199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.