Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0011427

Physical Location & Seq

Genomic Coordinates Forward (+)

27321153 .. 27324782

Gene Structure 3630 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g26080.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGGCGCCGAAGAAGAAGATAATCAGAAGAGCATACCAGTTCTGCCATGGATGCGAAGCCCAATCGATGTCAGTGCCGTCCACGAATGCCCTATCTCTCTCCTCCCCTGCATTGATCCCAGGTTGAAGGTGGCGTTGGAGAAGATGGGAATCTCTTCACTTTTCCCAGTTCAGCTTGCAGTTTGGCAGGAGACTGTTGGCCCGGGAGGTTTCGAGCGCGATTTGTGTGTTAATTCTCCAACTGGAAGTGGGAAGACTTTAGCTTATGCATTGCCAATTGTACAAATGCTGTCGACGCGCTCTGTGAAATGTCTTCGTGCGCTCGTGGTGCTGCCGACTCGGGATTTAGCATTGCAGGTGAAAGAGGTTTTTGCTGCAATTGCACCTGCAGTGGGGTTATCTGTTGGTCTTGCAGTTGGCCAATCTTCTATAGCTGATGAAATTTCAGAGCTTATCAATAGGCCTAAGCTTGAACTGGGTGTTAGATTTGACCCTGATGATGTTTTGCCCGAGTTACGAAGTTCTGTGGACATATTGGTGGCTACCCCAGGAAGGCTAATGGACCATATAAATAACACTAAAGGATTTACACTTGAGCATCTCTGTTATCTTGTTGTTGATGAAACAGATCGATTGCTAAGGGAGGCATACCAGTCTTGGCTACCCACTGTGCTTCAAATCACTCGCCCTGACGATGAAAGTTTCCTTCCCTGTGCTCAAAATTTTCTACCTTCCCCATTTGGTTCCTTAAAAACCATAAGGAGATCTGGTCTTGAGAGGGGGTTTAAGGGTAAATCTTACCCCAGGCTTGTGAAGATGGTTCTGTCAGCCACGCTAACCCAGGATCCAAGCAAACTTGCTCAGCTAGATCTGCATCATCCTTTGTTCTTGACAACTGGACAAAAGCGTTATCAGCTTCCAGAAAAGTTACAGTCCTACAAACTGTTATGCGAATCAAAATACAAGCCATTATATTTGGTTGGGCTCCTACAAAGTTTAGGAGCAGAGAAGTGCCTCGTTTTCACATCCTCTGTGGAGTCAACTCATCGTCTATGCACCTTATTGAACTCTTTTGATCATCTGCCTTTCAAGATTAAGGAGTATTCAAGCCTTCAACGTCAATCTGTTCGAAGCAAGACATTGAAGGCATTTCGGAAAGGGGAGATTCAAGTACTCGTTTCATCTGATGCAATGACTCGTGGAATGGATGTTGAAGGGGTGAGGAATGTCATTAATTATGATATGCCTCCATACATAAAGACATACATACACCGTGCAGGTCGGACAGCAAGAGCAGGCCAAAATGGTTGTTGCTTCACATTGTTGCGTAAAGAAGAGGTTAAGCGTTTCAACAAACTATTACGCAAAGCTGAGAATAACTCTTGCTCTAAATACTCTGTTCCTTCTAGTTACATTGAACCACTCCACTCTATCTATGAATCTGCACTGGAGAAATTGAAAGAGACTGTTGAAATGGAAACATCCCGGAAGAGAAAGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

501

Amino Acids

56.07

Weight (kDa)

9.09

Isoelectric Point (pI)

50.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15850
fragaria_vesca	FvH4_3g05121 FvH4_3g05121
malus_domestica	MD05G1280500.v1.1
prunus_persica	Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1
pyrus_communis	pycom05g26080
rosa_chinensis	RchiOBHm_Chr5g0014641
rosa_laevigata	RLG00000032134
rosa_multiflora	Rmu_sc0000120.1_g000019
rosa_roxburghii	Rroxscaffold_1G00061820
rosa_rugosa	Rorug05G0019900 Rorug05G0020000
rosa_samantha	Rh5AG115600 Rh5BG112200 Rh5CG123800 Rh5DG112000
rosa_wichuraiana	Rw5G009980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	346, 394
Acc36I	ACCTGC	3 cut(s)	346, 394, 1268
AccB1I	GGYRCC	1 cut(s)	5
AccI	GTMKAC	1 cut(s)	293
AccII	CGCG	2 cut(s)	219, 298
AciI	CCGC	1 cut(s)	1498
AclWI	GGATC	3 cut(s)	110, 839, 852
AcoI	YGGCCR	1 cut(s)	418
AcsI	RAATTY	2 cut(s)	441, 721
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	2 cut(s)	282, 1173
AfiI	CCNNNNNNNGG	2 cut(s)	392, 552
AjnI	CCWGG	4 cut(s)	119, 547, 803, 840
AjuI	GAANNNNNNNTTGG	2 cut(s)	119, 151
AluBI	AGCT	8 cut(s)	175, 263, 434, 451, 469, 865, 916, 1370
AluI	AGCT	8 cut(s)	175, 263, 434, 451, 469, 865, 916, 1370
Alw21I	GWGCWC	1 cut(s)	718
Alw26I	GTCTC	2 cut(s)	185, 1457
AlwI	GGATC	3 cut(s)	110, 839, 852
Ama87I	CYCGRG	3 cut(s)	202, 339, 509
AoxI	GGCC	4 cut(s)	199, 418, 461, 1297
ApeKI	GCWGC	2 cut(s)	331, 374
ApoI	RAATTY	2 cut(s)	441, 721
AseI	ATTAAT	1 cut(s)	1233
Asp700I	GAANNNNTTC	1 cut(s)	154
AspLEI	GCGC	4 cut(s)	8, 219, 300, 322
AspS9I	GGNCC	2 cut(s)	200, 562
AsuC2I	CCSGG	3 cut(s)	203, 204, 1486
AsuHPI	GGTGA	2 cut(s)	370, 1231
AsuII	TTCGAA	1 cut(s)	1129
AvaI	CYCGRG	3 cut(s)	202, 339, 509
AvaII	GGWCC	1 cut(s)	562
BalI	TGGCCA	1 cut(s)	420
BamHI	GGATCC	1 cut(s)	844
BanI	GGYRCC	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	987
BauI	CACGAG	2 cut(s)	323, 1197
BbsI	GAAGAC	2 cut(s)	260, 305
Bbv12I	GWGCWC	1 cut(s)	718
BbvI	GCAGC	2 cut(s)	318, 361
BccI	CCATC	2 cut(s)	139, 811
BceAI	ACGGC	1 cut(s)	62
BcgI	CGANNNNNNTGC	2 cut(s)	56, 90
BciT130I	CCWGG	4 cut(s)	121, 549, 805, 842
BclI	TGATCA	1 cut(s)	1075
BcnI	CCSGG	3 cut(s)	203, 204, 1486
BcoDI	GTCTC	2 cut(s)	185, 1457
BfaI	CTAG	2 cut(s)	866, 1407
BfmI	CTRYAG	2 cut(s)	387, 429
BfoI	RGCGCY	1 cut(s)	9
BfuAI	ACCTGC	3 cut(s)	346, 394, 1268
BglII	AGATCT	2 cut(s)	764, 868
BisI	GCNGC	2 cut(s)	332, 375
BlpI	GCTNAGC	1 cut(s)	861
BlsI	GCNGC	2 cut(s)	333, 376
BmcAI	AGTACT	1 cut(s)	1173
Bme1390I	CCNGG	7 cut(s)	121, 203, 204, 549, 805, 842, 1486
Bme18I	GGWCC	1 cut(s)	562
BmeT110I	CYCGRG	3 cut(s)	202, 339, 509
BmgT120I	GGNCC	2 cut(s)	200, 562
BmiI	GGNNCC	4 cut(s)	7, 745, 846, 986
BmrFI	CCNGG	7 cut(s)	121, 203, 204, 549, 805, 842, 1486
BmrI	ACTGGG	2 cut(s)	161, 485
BmsI	GCATC	4 cut(s)	42, 607, 883, 1177
BmuI	ACTGGG	2 cut(s)	161, 485
BpiI	GAAGAC	2 cut(s)	260, 305
BplI	GAGNNNNNCTC	2 cut(s)	1364, 1396
BpmI	CTGGAG	1 cut(s)	1469
Bpu10I	CCTNAGC	2 cut(s)	465, 638
Bpu1102I	GCTNAGC	1 cut(s)	861
Bpu14I	TTCGAA	1 cut(s)	1129
BpuEI	CTTGAG	2 cut(s)	614, 794
BpuMI	CCSGG	3 cut(s)	203, 204, 1486
Bsa29I	ATCGAT	2 cut(s)	66, 631
BsaBI	GATNNNNATC	2 cut(s)	149, 873
BsaHI	GRCGYC	1 cut(s)	6
BsaJI	CCNNGG	6 cut(s)	47, 119, 202, 547, 803, 840
BsaXI	ACNNNNNCTCC	2 cut(s)	754, 784
Bsc4I	CCNNNNNNNGG	2 cut(s)	392, 552
Bse1I	ACTGG	7 cut(s)	38, 167, 247, 480, 652, 901, 1452
Bse3DI	GCAATG	3 cut(s)	269, 350, 1197
Bse8I	GATNNNNATC	2 cut(s)	149, 873
BseBI	CCWGG	4 cut(s)	121, 549, 805, 842
BseCI	ATCGAT	2 cut(s)	66, 631
BseDI	CCNNGG	6 cut(s)	47, 119, 202, 547, 803, 840
BseGI	GGATG	5 cut(s)	57, 877, 1025, 1213, 1481
BseJI	GATNNNNATC	2 cut(s)	149, 873
BseLI	CCNNNNNNNGG	2 cut(s)	392, 552
BseMI	GCAATG	3 cut(s)	269, 350, 1197
BseMII	CTCAG	2 cut(s)	875, 1362
BseNI	ACTGG	7 cut(s)	38, 167, 247, 480, 652, 901, 1452
BseRI	GAGGAG	1 cut(s)	92
BseXI	GCAGC	2 cut(s)	318, 361
BsgI	GTGCAG	2 cut(s)	1296, 1428
Bsh1236I	CGCG	2 cut(s)	219, 298
BshFI	GGCC	4 cut(s)	201, 420, 463, 1299
BshNI	GGYRCC	1 cut(s)	5
BshVI	ATCGAT	2 cut(s)	66, 631
BsiHKAI	GWGCWC	1 cut(s)	718
BsiHKCI	CYCGRG	3 cut(s)	202, 339, 509
BsiSI	CCGG	2 cut(s)	203, 1486
BslI	CCNNNNNNNGG	2 cut(s)	392, 552
BsmAI	GTCTC	2 cut(s)	185, 1457
BsmI	GAATGC	1 cut(s)	92
BsnI	GGCC	4 cut(s)	201, 420, 463, 1299
BsoBI	CYCGRG	3 cut(s)	202, 339, 509
Bsp119I	TTCGAA	1 cut(s)	1129
Bsp1286I	GDGCHC	2 cut(s)	718, 987
Bsp1407I	TGTACA	1 cut(s)	280
Bsp143I	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
Bsp1720I	GCTNAGC	1 cut(s)	861
Bsp19I	CCATGG	1 cut(s)	47
BspACI	CCGC	1 cut(s)	1498
BspANI	GGCC	4 cut(s)	201, 420, 463, 1299
BspCNI	CTCAG	2 cut(s)	874, 1363
BspDI	ATCGAT	2 cut(s)	66, 631
BspFNI	CGCG	2 cut(s)	219, 298
BspLI	GGNNCC	4 cut(s)	7, 745, 846, 986
BspMAI	CTGCAG	1 cut(s)	391
BspMI	ACCTGC	3 cut(s)	346, 394, 1268
BspPI	GGATC	3 cut(s)	110, 839, 852
BspQI	GCTCTTC	1 cut(s)	23
BspT104I	TTCGAA	1 cut(s)	1129
BspT107I	GGYRCC	1 cut(s)	5
BsrDI	GCAATG	3 cut(s)	269, 350, 1197
BsrGI	TGTACA	1 cut(s)	280
BsrI	ACTGG	7 cut(s)	38, 167, 247, 480, 652, 901, 1452
BssECI	CCNNGG	6 cut(s)	47, 119, 202, 547, 803, 840
BssMI	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
BssNI	GRCGYC	1 cut(s)	6
BssSI	CACGAG	2 cut(s)	323, 1197
BssT1I	CCWWGG	1 cut(s)	47
Bst2BI	CACGAG	2 cut(s)	323, 1197
Bst2UI	CCWGG	4 cut(s)	121, 549, 805, 842
Bst4CI	ACNGT	6 cut(s)	196, 670, 933, 945, 1274, 1468
Bst6I	CTCTTC	4 cut(s)	23, 160, 1329, 1484
BstACI	GRCGYC	1 cut(s)	6
BstAUI	TGTACA	1 cut(s)	280
BstBI	TTCGAA	1 cut(s)	1129
BstC8I	GCNNGC	2 cut(s)	177, 1297
BstDEI	CTNAG	4 cut(s)	465, 638, 861, 1371
BstDSI	CCRYGG	1 cut(s)	47
BstF5I	GGATG	5 cut(s)	57, 877, 1025, 1213, 1481
BstFNI	CGCG	2 cut(s)	219, 298
BstH2I	RGCGCY	1 cut(s)	9
BstHHI	GCGC	4 cut(s)	8, 219, 300, 322
BstKTI	GATC	6 cut(s)	118, 631, 767, 847, 871, 1078
BstMAI	GTCTC	2 cut(s)	185, 1457
BstMBI	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
BstMWI	GCNNNNNNNGC	6 cut(s)	52, 295, 328, 380, 871, 913
BstNI	CCWGG	4 cut(s)	121, 549, 805, 842
BstSCI	CCNGG	7 cut(s)	119, 201, 202, 547, 803, 840, 1484
BstSFI	CTRYAG	2 cut(s)	387, 429
BstUI	CGCG	2 cut(s)	219, 298
BstV1I	GCAGC	2 cut(s)	318, 361
BstV2I	GAAGAC	2 cut(s)	260, 305
BstX2I	RGATCY	3 cut(s)	764, 844, 868
BstYI	RGATCY	3 cut(s)	764, 844, 868
Bsu15I	ATCGAT	2 cut(s)	66, 631
BsuRI	GGCC	4 cut(s)	201, 420, 463, 1299
BsuTUI	ATCGAT	2 cut(s)	66, 631
BtgI	CCRYGG	1 cut(s)	47
BtsCI	GGATG	5 cut(s)	57, 877, 1025, 1213, 1481
BtsI	GCAGTG	1 cut(s)	396
BtsIMutI	CAGTG	4 cut(s)	79, 396, 666, 1445
BveI	ACCTGC	3 cut(s)	346, 394, 1268
Cac8I	GCNNGC	2 cut(s)	177, 1297
CfoI	GCGC	4 cut(s)	8, 219, 300, 322
Cfr13I	GGNCC	2 cut(s)	200, 562
Cfr9I	CCCGGG	1 cut(s)	202
ClaI	ATCGAT	2 cut(s)	66, 631
CseI	GACGC	1 cut(s)	304
Csp6I	GTAC	2 cut(s)	281, 1172
CviAII	CATG	1 cut(s)	48
CviQI	GTAC	2 cut(s)	281, 1172
DdeI	CTNAG	4 cut(s)	465, 638, 861, 1371
DinI	GGCGCC	1 cut(s)	7
DpnI	GATC	6 cut(s)	117, 630, 766, 846, 870, 1077
DpnII	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
EaeI	YGGCCR	1 cut(s)	418
Eam1104I	CTCTTC	4 cut(s)	23, 160, 1329, 1484
EarI	CTCTTC	4 cut(s)	23, 160, 1329, 1484
Eco130I	CCWWGG	1 cut(s)	47
Eco147I	AGGCCT	1 cut(s)	463
Eco24I	GRGCYC	1 cut(s)	987
Eco47I	GGWCC	1 cut(s)	562
Eco88I	CYCGRG	3 cut(s)	202, 339, 509
EcoRII	CCWGG	4 cut(s)	119, 547, 803, 840
EcoT14I	CCWWGG	1 cut(s)	47
EcoT22I	ATGCAT	1 cut(s)	271
EcoT38I	GRGCYC	1 cut(s)	987
EgeI	GGCGCC	1 cut(s)	7
EheI	GGCGCC	1 cut(s)	7
ErhI	CCWWGG	1 cut(s)	47
FaeI	CATG	1 cut(s)	51
FatI	CATG	1 cut(s)	47
FbaI	TGATCA	1 cut(s)	1075
FblI	GTMKAC	1 cut(s)	293
Fnu4HI	GCNGC	2 cut(s)	332, 375
FokI	GGATG	5 cut(s)	64, 864, 1012, 1220, 1468
FriOI	GRGCYC	1 cut(s)	987
Fsp4HI	GCNGC	2 cut(s)	332, 375
FspBI	CTAG	2 cut(s)	866, 1407
GlaI	GCGC	4 cut(s)	7, 218, 299, 321
GluI	GCNGC	2 cut(s)	332, 375
GsuI	CTGGAG	1 cut(s)	1469
HaeII	RGCGCY	1 cut(s)	9
HaeIII	GGCC	4 cut(s)	201, 420, 463, 1299
HapII	CCGG	2 cut(s)	203, 1486
HgaI	GACGC	1 cut(s)	304
HhaI	GCGC	4 cut(s)	8, 219, 300, 322
Hin1I	GRCGYC	1 cut(s)	6
Hin1II	CATG	1 cut(s)	51
Hin6I	GCGC	4 cut(s)	6, 217, 298, 320
HinP1I	GCGC	4 cut(s)	6, 217, 298, 320
HincII	GTYRAC	2 cut(s)	294, 1041
HindII	GTYRAC	2 cut(s)	294, 1041
HindIII	AAGCTT	1 cut(s)	467
HinfI	GANTC	7 cut(s)	150, 337, 953, 1037, 1165, 1195, 1439
HpaII	CCGG	2 cut(s)	203, 1486
HphI	GGTGA	2 cut(s)	370, 1231
Hpy166II	GTNNAC	4 cut(s)	82, 294, 529, 1041
Hpy188I	TCNGA	5 cut(s)	27, 448, 1155, 1186, 1284
Hpy188III	TCNNGA	5 cut(s)	341, 773, 889, 920, 1090
Hpy8I	GTNNAC	4 cut(s)	82, 294, 529, 1041
Hpy99I	CGWCG	1 cut(s)	298
HpyAV	CCTTC	8 cut(s)	121, 546, 716, 741, 1121, 1138, 1208, 1413
HpyCH4III	ACNGT	6 cut(s)	196, 670, 933, 945, 1274, 1468
HpyCH4IV	ACGT	1 cut(s)	1117
HpyF10VI	GCNNNNNNNGC	6 cut(s)	52, 295, 328, 380, 871, 913
HpyF3I	CTNAG	4 cut(s)	465, 638, 861, 1371
HpySE526I	ACGT	1 cut(s)	1117
Hsp92I	GRCGYC	1 cut(s)	6
Hsp92II	CATG	1 cut(s)	51
HspAI	GCGC	4 cut(s)	6, 217, 298, 320
KasI	GGCGCC	1 cut(s)	5
Ksp22I	TGATCA	1 cut(s)	1075
Kzo9I	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
LguI	GCTCTTC	1 cut(s)	23
LmnI	GCTCC	2 cut(s)	990, 1001
Lsp1109I	GCAGC	2 cut(s)	318, 361
LweI	GCATC	4 cut(s)	42, 607, 883, 1177
MaeI	CTAG	2 cut(s)	866, 1407
MaeII	ACGT	1 cut(s)	1117
MaeIII	GTNAC	3 cut(s)	513, 927, 1409
MalI	GATC	6 cut(s)	117, 630, 766, 846, 870, 1077
MboI	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
MfeI	CAATTG	2 cut(s)	276, 378
MflI	RGATCY	3 cut(s)	764, 844, 868
MhlI	GDGCHC	2 cut(s)	718, 987
MlsI	TGGCCA	1 cut(s)	420
MluCI	AATT	7 cut(s)	232, 276, 378, 441, 721, 1234, 1454
MluNI	TGGCCA	1 cut(s)	420
Mly113I	GGCGCC	1 cut(s)	6
MlyI	GAGTC	3 cut(s)	331, 1046, 1189
MmeI	TCCRAC	3 cut(s)	117, 263, 1262
Mox20I	TGGCCA	1 cut(s)	420
Mph1103I	ATGCAT	1 cut(s)	271
MroXI	GAANNNNTTC	1 cut(s)	154
MscI	TGGCCA	1 cut(s)	420
MseI	TTAA	6 cut(s)	231, 749, 786, 1095, 1233, 1341
MslI	CAYNNNNRTG	1 cut(s)	536
Msp20I	TGGCCA	1 cut(s)	420
MspI	CCGG	2 cut(s)	203, 1486
MspR9I	CCNGG	7 cut(s)	121, 203, 204, 549, 805, 842, 1486
MunI	CAATTG	2 cut(s)	276, 378
Mva1269I	GAATGC	1 cut(s)	92
MvaI	CCWGG	4 cut(s)	121, 549, 805, 842
MvnI	CGCG	2 cut(s)	219, 298
MwoI	GCNNNNNNNGC	6 cut(s)	52, 295, 328, 380, 871, 913
NarI	GGCGCC	1 cut(s)	6
NciI	CCSGG	3 cut(s)	203, 204, 1486
NcoI	CCATGG	1 cut(s)	47
NdeII	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
NlaIII	CATG	1 cut(s)	51
NlaIV	GGNNCC	4 cut(s)	7, 745, 846, 986
NsiI	ATGCAT	1 cut(s)	271
NspV	TTCGAA	1 cut(s)	1129
PaqCI	CACCTGC	2 cut(s)	346, 394
PceI	AGGCCT	1 cut(s)	463
PciSI	GCTCTTC	1 cut(s)	23
PctI	GAATGC	1 cut(s)	92
PdmI	GAANNNNTTC	1 cut(s)	154
PfeI	GAWTC	4 cut(s)	150, 953, 1165, 1439
PfoI	TCCNGGA	1 cut(s)	1484
PkrI	GCNGC	2 cut(s)	333, 376
PleI	GAGTC	3 cut(s)	331, 1045, 1189
PluTI	GGCGCC	1 cut(s)	9
PpsI	GAGTC	3 cut(s)	331, 1045, 1189
PshBI	ATTAAT	1 cut(s)	1233
Psp6I	CCWGG	4 cut(s)	119, 547, 803, 840
PspGI	CCWGG	4 cut(s)	119, 547, 803, 840
PspN4I	GGNNCC	4 cut(s)	7, 745, 846, 986
PspPI	GGNCC	2 cut(s)	200, 562
PstI	CTGCAG	1 cut(s)	391
PsuI	RGATCY	3 cut(s)	764, 844, 868
RsaI	GTAC	2 cut(s)	282, 1173
RsaNI	GTAC	2 cut(s)	281, 1172
RseI	CAYNNNNRTG	1 cut(s)	536
SalI	GTCGAC	1 cut(s)	292
SapI	GCTCTTC	1 cut(s)	23
SaqAI	TTAA	6 cut(s)	231, 749, 786, 1095, 1233, 1341
SatI	GCNGC	2 cut(s)	332, 375
Sau3AI	GATC	6 cut(s)	115, 628, 764, 844, 868, 1075
Sau96I	GGNCC	2 cut(s)	200, 562
ScaI	AGTACT	1 cut(s)	1173
SchI	GAGTC	3 cut(s)	331, 1046, 1189
ScrFI	CCNGG	7 cut(s)	121, 203, 204, 549, 805, 842, 1486
SduI	GDGCHC	2 cut(s)	718, 987
SfaNI	GCATC	4 cut(s)	42, 607, 883, 1177
SfcI	CTRYAG	2 cut(s)	387, 429
SfoI	GGCGCC	1 cut(s)	7
SfuI	TTCGAA	1 cut(s)	1129
SinI	GGWCC	1 cut(s)	562
SmaI	CCCGGG	1 cut(s)	204
SmiMI	CAYNNNNRTG	1 cut(s)	536
SmlI	CTYRAG	2 cut(s)	593, 773
SmoI	CTYRAG	2 cut(s)	593, 773
Sse9I	AATT	7 cut(s)	232, 276, 378, 441, 721, 1234, 1454
SseBI	AGGCCT	1 cut(s)	463
SsiI	CCGC	1 cut(s)	1498
SspDI	GGCGCC	1 cut(s)	5
SspMI	CTAG	2 cut(s)	866, 1407
StuI	AGGCCT	1 cut(s)	463
StyD4I	CCNGG	7 cut(s)	119, 201, 202, 547, 803, 840, 1484
StyI	CCWWGG	1 cut(s)	47
TaaI	ACNGT	6 cut(s)	196, 670, 933, 945, 1274, 1468
TaiI	ACGT	1 cut(s)	1120
TaqI	TCGA	5 cut(s)	66, 213, 293, 631, 1129
TasI	AATT	7 cut(s)	232, 276, 378, 441, 721, 1234, 1454
TatI	WGTACW	2 cut(s)	280, 1171
TfiI	GAWTC	4 cut(s)	150, 953, 1165, 1439
Tru1I	TTAA	6 cut(s)	231, 749, 786, 1095, 1233, 1341
Tru9I	TTAA	6 cut(s)	231, 749, 786, 1095, 1233, 1341
TscAI	CASTG	4 cut(s)	79, 396, 673, 1452
TseI	GCWGC	2 cut(s)	331, 374
TspDTI	ATGAA	5 cut(s)	453, 636, 711, 1170, 1452
TspMI	CCCGGG	1 cut(s)	202
TspRI	CASTG	4 cut(s)	79, 396, 673, 1452
VpaK11BI	GGWCC	1 cut(s)	562
VspI	ATTAAT	1 cut(s)	1233
XapI	RAATTY	2 cut(s)	441, 721
XcmI	CCANNNNNNNNNTGG	2 cut(s)	45, 127
XmaI	CCCGGG	1 cut(s)	202
XmiI	GTMKAC	1 cut(s)	293
XmnI	GAANNNNTTC	1 cut(s)	154
XspI	CTAG	2 cut(s)	866, 1407
ZrmI	AGTACT	1 cut(s)	1173
Zsp2I	ATGCAT	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.