Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011427

Physical Location & Seq

Genomic Coordinates Forward (+)

83894190 .. 83899611

Gene Structure 5422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00061820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGGTAGAGAAGACGGTAAGCGAATTCGGAAACCAAAAGAAGAACGCGAAAAGCCAAAGAGCATACCAGTCCTGCCATGGATGCGAACCCCAATTGACGTCAGCGCCTTGGACGAAAAGCCCCTTTCTCTTCTGCCTCGCCTTGACCCCAGGTTGAAGGAGGCTTTGGAGAAGATGAAAATCTCATCCCTTTACCCAGTTCAGCTTGCTGTTTGGGAAGAGACTATTGGGCCTGGTGGGTTTCAGCGTGACTTGTGTGTTAATTCACCTACTGGAAGTGGGAAAACTCTGGCTTATGCTTTGCCAATTGTGCAAGCTTTGTCAACTCGCAATGTTAAATGCCTACGTGCTCTAGTTGTGTTGCCAACTCATGATTTAGCTTTGCAGGTGAAAGATGTGTTTTCTGCAATTGCTCCTGCAGTGGGCTTGTCGGTTGGTCTTGCAGTTGGGCAAACTTCGATTGCCAATGAGATATCAGAACTTATTGATAAGCCTAAGCTTGAGTTTGGCGTTTGTTTCGACCAAGAGGATCGTGTGCCTCAATTACGTAGTGCGGTGGACATATTGGTGGCTACCCCTGGAAGGCTAATGGACCATATTAATAACACCAAGGGATTTACGCTTGAGCATCTCTGTTATCTTGTTGTTGATGAAACAGATCGATTACTCAGGGAGGCATACCAGAATTGGCTACCCACTGTGCTTCAATTAACTCGCTTTGATGATGATAGTTTATTTCCTTGTGCTCAAAATTTTCTACCTTCAGCATTTGGTTCCTTCAGAACCATAAGGAGATCTGGTCTTGAGAGGGGGTTTAGAGGTACACCTTACCCCAGGCTTGTGAAGATGGTTCTTTCTGCCACTTTGACCCAGGATCCAAGCAAGCTATCTCAACTTGATCTGCATCATCCTTTGTTCTTGACAACTGGAGAAATGCGTTATCGGCTTCCAGAAACATTGAAGTCCTACACTGTGAATGGGATATGTGGGAAAACATTAAATTGGTTTGAATCTGATATACTGAATTCTGGAATCAAGACACTGAAGGCATTTCGGAAAGGAAAGATTCAAGTACTTGTTTCAACTGATGCAATGACTCGTGGAATGGATGTTGAAGGGGTGAAAAATGTGATTAACTATGATATGCCTGCCTACATAAAGACTTATGTTCACCGTGCGGGACGAACAGCAAGAGCTGGTCAAACTGGCTGTTGCTATTCATTATTGCGTGAAAAAGAGGTTCAACGATTCTACAAGATGTTACGCAAAGCTGAGAATAACTTCTGCTCTAAGTACTCTGTTCCTTCCAATTACATTGAACCGCTCCACGGTGTCTACGAATCTGCAAAGGAGAAACTGAAGGAGACGGTTGAAATGGAATTATCAAAGAAGAGACAAGTCGGTTCCAAGTTTTCTCAAGTGGCGAAAGGAAAAGAAGTCCACTCTGCAAAGTACTTGGCATCAGTACCAGCAGCAGCAGCAGAACCAAAACTTGGTGCTGATGGCGAGGAGGAGGGCAACGCGGATGAACCCTTCGGTGAGGAATTGAGAGAATCATTAGGGCTAGCATATTCTCTGTCCTCCTCAGTGATTGTATCCAACACCTTTGAAGTTCTGCGCCTCATGACACTAACAATCTGTGGTGGTGCAGCTTCTGTAATGAACCTTGCTAGGCGTGCATTTGCCATTTTCTTCGCTCGCAAGCGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

570

Amino Acids

63.55

Weight (kDa)

9.1

Isoelectric Point (pI)

32.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	66 - 291	6.7e-28	DEAD/DEAH box helicase
ResIII	PF04851	82 - 229	3.7e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	346 - 400	1.8e-16	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15850
fragaria_vesca	FvH4_3g05121 FvH4_3g05121
malus_domestica	MD05G1280500.v1.1
prunus_persica	Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1
pyrus_communis	pycom05g26080
rosa_chinensis	RchiOBHm_Chr5g0014641
rosa_laevigata	RLG00000032134
rosa_multiflora	Rmu_sc0000120.1_g000019
rosa_roxburghii	Rroxscaffold_1G00061820
rosa_rugosa	Rorug05G0019900 Rorug05G0020000
rosa_samantha	Rh5AG115600 Rh5BG112200 Rh5CG123800 Rh5DG112000
rosa_wichuraiana	Rw5G009980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	376
AatII	GACGTC	1 cut(s)	102
Acc36I	ACCTGC	1 cut(s)	376
AccB7I	CCANNNNNTGG	1 cut(s)	1493
AccBSI	CCGCTC	1 cut(s)	1324
AccI	GTMKAC	1 cut(s)	1335
AccII	CGCG	2 cut(s)	48, 1523
AciI	CCGC	4 cut(s)	554, 1178, 1322, 1523
AclWI	GGATC	3 cut(s)	537, 869, 882
AcsI	RAATTY	3 cut(s)	24, 751, 1024
AcuI	CTGAAG	4 cut(s)	747, 763, 1064, 1379
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	5 cut(s)	823, 1074, 1295, 1454, 1467
AfiI	CCNNNNNNNGG	4 cut(s)	422, 582, 1328, 1493
AjnI	CCWGG	5 cut(s)	149, 232, 577, 833, 870
AjuI	GAANNNNNNNTTGG	6 cut(s)	149, 181, 210, 242, 1476, 1508
AluBI	AGCT	8 cut(s)	205, 317, 380, 499, 886, 1196, 1271, 1652
AluI	AGCT	8 cut(s)	205, 317, 380, 499, 886, 1196, 1271, 1652
Alw21I	GWGCWC	2 cut(s)	352, 748
Alw26I	GTCTC	3 cut(s)	215, 1358, 1387
AlwI	GGATC	3 cut(s)	537, 869, 882
AlwNI	CAGNNNCTG	1 cut(s)	1655
AoxI	GGCC	1 cut(s)	230
ApeKI	GCWGC	4 cut(s)	1472, 1475, 1478, 1649
ApoI	RAATTY	3 cut(s)	24, 751, 1024
AseI	ATTAAT	1 cut(s)	600
Asp700I	GAANNNNTTC	1 cut(s)	1280
AspLEI	GCGC	2 cut(s)	107, 1620
AspS9I	GGNCC	2 cut(s)	230, 592
AsuHPI	GGTGA	5 cut(s)	258, 400, 1132, 1163, 1550
AsuNHI	GCTAGC	1 cut(s)	1564
AvaII	GGWCC	1 cut(s)	592
BamHI	GGATCC	1 cut(s)	874
BauI	CACGAG	1 cut(s)	1098
BbsI	GAAGAC	1 cut(s)	18
Bbv12I	GWGCWC	2 cut(s)	352, 748
BbvI	GCAGC	4 cut(s)	1484, 1487, 1490, 1661
BccI	CCATC	2 cut(s)	841, 1496
BciT130I	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BciVI	GTATCC	1 cut(s)	1606
BcoDI	GTCTC	3 cut(s)	215, 1358, 1387
BfaI	CTAG	3 cut(s)	353, 1565, 1671
BfmI	CTRYAG	1 cut(s)	417
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	376
BfuI	GTATCC	1 cut(s)	1606
BglII	AGATCT	1 cut(s)	794
BisI	GCNGC	4 cut(s)	1473, 1476, 1479, 1650
BlsI	GCNGC	4 cut(s)	1474, 1477, 1480, 1651
BmcAI	AGTACT	3 cut(s)	1074, 1295, 1454
Bme1390I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
Bme18I	GGWCC	1 cut(s)	592
BmgT120I	GGNCC	2 cut(s)	230, 592
BmiI	GGNNCC	3 cut(s)	775, 876, 1405
BmrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
BmrI	ACTGGG	1 cut(s)	191
BmsI	GCATC	5 cut(s)	72, 637, 913, 1078, 1469
BmtI	GCTAGC	1 cut(s)	1568
BmuI	ACTGGG	1 cut(s)	191
BpiI	GAAGAC	1 cut(s)	18
BpmI	CTGGAG	1 cut(s)	948
Bpu10I	CCTNAGC	1 cut(s)	495
BpuEI	CTTGAG	4 cut(s)	521, 644, 824, 1401
Bsa29I	ATCGAT	1 cut(s)	661
BsaAI	YACGTR	2 cut(s)	347, 548
BsaBI	GATNNNNATC	2 cut(s)	179, 903
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	8 cut(s)	77, 108, 149, 577, 609, 833, 870, 1327
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	4 cut(s)	422, 582, 1328, 1493
Bse1I	ACTGG	5 cut(s)	68, 197, 277, 931, 1210
Bse3DI	GCAATG	2 cut(s)	337, 1098
Bse8I	GATNNNNATC	2 cut(s)	179, 903
BseBI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BseCI	ATCGAT	1 cut(s)	661
BseDI	CCNNGG	8 cut(s)	77, 108, 149, 577, 609, 833, 870, 1327
BseGI	GGATG	5 cut(s)	87, 185, 907, 1114, 1531
BseJI	GATNNNNATC	2 cut(s)	179, 903
BseLI	CCNNNNNNNGG	4 cut(s)	422, 582, 1328, 1493
BseMI	GCAATG	2 cut(s)	337, 1098
BseMII	CTCAG	3 cut(s)	682, 1263, 1599
BseNI	ACTGG	5 cut(s)	68, 197, 277, 931, 1210
BseRI	GAGGAG	3 cut(s)	1523, 1526, 1573
BseXI	GCAGC	4 cut(s)	1484, 1487, 1490, 1661
BsgI	GTGCAG	1 cut(s)	1668
Bsh1236I	CGCG	2 cut(s)	48, 1523
BshFI	GGCC	1 cut(s)	232
BshVI	ATCGAT	1 cut(s)	661
BsiHKAI	GWGCWC	2 cut(s)	352, 748
BslFI	GGGAC	1 cut(s)	1194
BslI	CCNNNNNNNGG	4 cut(s)	422, 582, 1328, 1493
BsmAI	GTCTC	3 cut(s)	215, 1358, 1387
BsmBI	CGTCTC	1 cut(s)	1358
BsmFI	GGGAC	1 cut(s)	1194
BsnI	GGCC	1 cut(s)	232
Bsp1286I	GDGCHC	2 cut(s)	352, 748
Bsp143I	GATC	5 cut(s)	529, 658, 794, 874, 898
Bsp19I	CCATGG	1 cut(s)	77
BspACI	CCGC	4 cut(s)	554, 1178, 1322, 1523
BspANI	GGCC	1 cut(s)	232
BspCNI	CTCAG	3 cut(s)	681, 1264, 1598
BspDI	ATCGAT	1 cut(s)	661
BspFNI	CGCG	2 cut(s)	48, 1523
BspHI	TCATGA	2 cut(s)	370, 1623
BspLI	GGNNCC	3 cut(s)	775, 876, 1405
BspMAI	CTGCAG	1 cut(s)	421
BspMI	ACCTGC	1 cut(s)	376
BspOI	GCTAGC	1 cut(s)	1568
BspPI	GGATC	3 cut(s)	537, 869, 882
BsrBI	CCGCTC	1 cut(s)	1324
BsrDI	GCAATG	2 cut(s)	337, 1098
BsrI	ACTGG	5 cut(s)	68, 197, 277, 931, 1210
BssECI	CCNNGG	8 cut(s)	77, 108, 149, 577, 609, 833, 870, 1327
BssMI	GATC	5 cut(s)	529, 658, 794, 874, 898
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	1 cut(s)	1098
BssT1I	CCWWGG	3 cut(s)	77, 108, 609
Bst2BI	CACGAG	1 cut(s)	1098
Bst2UI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
Bst4CI	ACNGT	6 cut(s)	17, 700, 973, 1175, 1331, 1369
Bst6I	CTCTTC	3 cut(s)	135, 213, 1385
BstACI	GRCGYC	1 cut(s)	99
BstBAI	YACGTR	2 cut(s)	347, 548
BstC8I	GCNNGC	8 cut(s)	207, 315, 884, 1149, 1566, 1677, 1699, 1703
BstDEI	CTNAG	5 cut(s)	495, 668, 1272, 1290, 1585
BstDSI	CCRYGG	2 cut(s)	77, 1327
BstF5I	GGATG	5 cut(s)	87, 185, 907, 1114, 1531
BstFNI	CGCG	2 cut(s)	48, 1523
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	2 cut(s)	107, 1620
BstKTI	GATC	5 cut(s)	532, 661, 797, 877, 901
BstMAI	GTCTC	3 cut(s)	215, 1358, 1387
BstMBI	GATC	5 cut(s)	529, 658, 794, 874, 898
BstMWI	GCNNNNNNNGC	5 cut(s)	82, 310, 943, 1478, 1676
BstNI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BstSCI	CCNGG	5 cut(s)	149, 232, 577, 833, 870
BstSFI	CTRYAG	1 cut(s)	417
BstSNI	TACGTA	1 cut(s)	548
BstUI	CGCG	2 cut(s)	48, 1523
BstV1I	GCAGC	4 cut(s)	1484, 1487, 1490, 1661
BstV2I	GAAGAC	1 cut(s)	18
BstX2I	RGATCY	2 cut(s)	794, 874
BstYI	RGATCY	2 cut(s)	794, 874
Bsu15I	ATCGAT	1 cut(s)	661
BsuI	GTATCC	1 cut(s)	1606
BsuRI	GGCC	1 cut(s)	232
BsuTUI	ATCGAT	1 cut(s)	661
BtgI	CCRYGG	2 cut(s)	77, 1327
BtsCI	GGATG	5 cut(s)	87, 185, 907, 1114, 1531
BtsI	GCAGTG	1 cut(s)	426
BtsIMutI	CAGTG	5 cut(s)	426, 696, 969, 1040, 1593
BveI	ACCTGC	1 cut(s)	376
Cac8I	GCNNGC	8 cut(s)	207, 315, 884, 1149, 1566, 1677, 1699, 1703
CaiI	CAGNNNCTG	1 cut(s)	1655
CciI	TCATGA	2 cut(s)	370, 1623
CfoI	GCGC	2 cut(s)	107, 1620
Cfr13I	GGNCC	2 cut(s)	230, 592
ClaI	ATCGAT	1 cut(s)	661
Csp6I	GTAC	5 cut(s)	822, 1073, 1294, 1453, 1466
CviAII	CATG	3 cut(s)	78, 371, 1624
CviQI	GTAC	5 cut(s)	822, 1073, 1294, 1453, 1466
DdeI	CTNAG	5 cut(s)	495, 668, 1272, 1290, 1585
DpnI	GATC	5 cut(s)	531, 660, 796, 876, 900
DpnII	GATC	5 cut(s)	529, 658, 794, 874, 898
Eam1104I	CTCTTC	3 cut(s)	135, 213, 1385
EarI	CTCTTC	3 cut(s)	135, 213, 1385
Eco105I	TACGTA	1 cut(s)	548
Eco130I	CCWWGG	3 cut(s)	77, 108, 609
Eco32I	GATATC	1 cut(s)	474
Eco47I	GGWCC	1 cut(s)	592
Eco57I	CTGAAG	4 cut(s)	747, 763, 1064, 1379
EcoRI	GAATTC	2 cut(s)	24, 1024
EcoRII	CCWGG	5 cut(s)	149, 232, 577, 833, 870
EcoRV	GATATC	1 cut(s)	474
EcoT14I	CCWWGG	3 cut(s)	77, 108, 609
ErhI	CCWWGG	3 cut(s)	77, 108, 609
Esp3I	CGTCTC	1 cut(s)	1358
FaeI	CATG	3 cut(s)	81, 374, 1627
FaqI	GGGAC	1 cut(s)	1194
FatI	CATG	3 cut(s)	77, 370, 1623
FauI	CCCGC	1 cut(s)	1171
FblI	GTMKAC	1 cut(s)	1335
Fnu4HI	GCNGC	4 cut(s)	1473, 1476, 1479, 1650
FokI	GGATG	5 cut(s)	94, 172, 894, 1121, 1538
Fsp4HI	GCNGC	4 cut(s)	1473, 1476, 1479, 1650
FspBI	CTAG	3 cut(s)	353, 1565, 1671
GlaI	GCGC	2 cut(s)	106, 1619
GluI	GCNGC	4 cut(s)	1473, 1476, 1479, 1650
GsuI	CTGGAG	1 cut(s)	948
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	1 cut(s)	232
HhaI	GCGC	2 cut(s)	107, 1620
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	3 cut(s)	81, 374, 1627
Hin6I	GCGC	2 cut(s)	105, 1618
HinP1I	GCGC	2 cut(s)	105, 1618
HincII	GTYRAC	1 cut(s)	324
HindII	GTYRAC	1 cut(s)	324
HindIII	AAGCTT	2 cut(s)	315, 497
HinfI	GANTC	7 cut(s)	1010, 1032, 1066, 1096, 1248, 1340, 1553
HphI	GGTGA	5 cut(s)	258, 400, 1132, 1163, 1550
Hpy166II	GTNNAC	6 cut(s)	324, 559, 824, 1171, 1336, 1441
Hpy188I	TCNGA	5 cut(s)	30, 478, 782, 1015, 1056
Hpy188III	TCNNGA	7 cut(s)	371, 803, 919, 950, 1029, 1036, 1624
Hpy8I	GTNNAC	6 cut(s)	324, 559, 824, 1171, 1336, 1441
HpyAV	CCTTC	9 cut(s)	151, 576, 771, 787, 1039, 1109, 1314, 1354, 1543
HpyCH4III	ACNGT	6 cut(s)	17, 700, 973, 1175, 1331, 1369
HpyCH4IV	ACGT	3 cut(s)	99, 346, 547
HpyF10VI	GCNNNNNNNGC	5 cut(s)	82, 310, 943, 1478, 1676
HpyF3I	CTNAG	5 cut(s)	495, 668, 1272, 1290, 1585
HpySE526I	ACGT	3 cut(s)	99, 346, 547
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	3 cut(s)	81, 374, 1627
HspAI	GCGC	2 cut(s)	105, 1618
Kzo9I	GATC	5 cut(s)	529, 658, 794, 874, 898
LmnI	GCTCC	2 cut(s)	418, 1329
Lsp1109I	GCAGC	4 cut(s)	1484, 1487, 1490, 1661
LweI	GCATC	5 cut(s)	72, 637, 913, 1078, 1469
MaeI	CTAG	3 cut(s)	353, 1565, 1671
MaeII	ACGT	3 cut(s)	99, 346, 547
MaeIII	GTNAC	2 cut(s)	248, 1260
MalI	GATC	5 cut(s)	531, 660, 796, 876, 900
MbiI	CCGCTC	1 cut(s)	1324
MboI	GATC	5 cut(s)	529, 658, 794, 874, 898
MboII	GAAGA	8 cut(s)	23, 53, 122, 184, 230, 856, 1402, 1684
MfeI	CAATTG	3 cut(s)	93, 306, 408
MflI	RGATCY	2 cut(s)	794, 874
MhlI	GDGCHC	2 cut(s)	352, 748
MlyI	GAGTC	1 cut(s)	1090
MmeI	TCCRAC	1 cut(s)	1623
MroXI	GAANNNNTTC	1 cut(s)	1280
MseI	TTAA	6 cut(s)	261, 336, 600, 710, 998, 1134
MslI	CAYNNNNRTG	1 cut(s)	566
MspR9I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
MunI	CAATTG	3 cut(s)	93, 306, 408
MvaI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
MvnI	CGCG	2 cut(s)	48, 1523
MwoI	GCNNNNNNNGC	5 cut(s)	82, 310, 943, 1478, 1676
NcoI	CCATGG	1 cut(s)	77
NdeII	GATC	5 cut(s)	529, 658, 794, 874, 898
NheI	GCTAGC	1 cut(s)	1564
NlaIII	CATG	3 cut(s)	81, 374, 1627
NlaIV	GGNNCC	3 cut(s)	775, 876, 1405
NmuCI	GTSAC	1 cut(s)	248
PagI	TCATGA	2 cut(s)	370, 1623
PaqCI	CACCTGC	1 cut(s)	376
PcsI	WCGNNNNNNNCGW	1 cut(s)	1335
PdmI	GAANNNNTTC	1 cut(s)	1280
PfeI	GAWTC	6 cut(s)	1010, 1032, 1066, 1248, 1340, 1553
PflMI	CCANNNNNTGG	1 cut(s)	1493
PkrI	GCNGC	4 cut(s)	1474, 1477, 1480, 1651
PleI	GAGTC	1 cut(s)	1090
PpsI	GAGTC	1 cut(s)	1090
Ppu21I	YACGTR	2 cut(s)	347, 548
PshBI	ATTAAT	1 cut(s)	600
Psp6I	CCWGG	5 cut(s)	149, 232, 577, 833, 870
PspGI	CCWGG	5 cut(s)	149, 232, 577, 833, 870
PspN4I	GGNNCC	3 cut(s)	775, 876, 1405
PspPI	GGNCC	2 cut(s)	230, 592
PstI	CTGCAG	1 cut(s)	421
PstNI	CAGNNNCTG	1 cut(s)	1655
PsuI	RGATCY	2 cut(s)	794, 874
RsaI	GTAC	5 cut(s)	823, 1074, 1295, 1454, 1467
RsaNI	GTAC	5 cut(s)	822, 1073, 1294, 1453, 1466
RseI	CAYNNNNRTG	1 cut(s)	566
SaqAI	TTAA	6 cut(s)	261, 336, 600, 710, 998, 1134
SatI	GCNGC	4 cut(s)	1473, 1476, 1479, 1650
Sau3AI	GATC	5 cut(s)	529, 658, 794, 874, 898
Sau96I	GGNCC	2 cut(s)	230, 592
ScaI	AGTACT	3 cut(s)	1074, 1295, 1454
SchI	GAGTC	1 cut(s)	1090
ScrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
SduI	GDGCHC	2 cut(s)	352, 748
SfaNI	GCATC	5 cut(s)	72, 637, 913, 1078, 1469
SfcI	CTRYAG	1 cut(s)	417
SinI	GGWCC	1 cut(s)	592
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	4 cut(s)	500, 623, 803, 1416
SmoI	CTYRAG	4 cut(s)	500, 623, 803, 1416
SnaBI	TACGTA	1 cut(s)	548
SsiI	CCGC	4 cut(s)	554, 1178, 1322, 1523
SspMI	CTAG	3 cut(s)	353, 1565, 1671
StyD4I	CCNGG	5 cut(s)	149, 232, 577, 833, 870
StyI	CCWWGG	3 cut(s)	77, 108, 609
TaaI	ACNGT	6 cut(s)	17, 700, 973, 1175, 1331, 1369
TaiI	ACGT	3 cut(s)	102, 349, 550
TaqI	TCGA	3 cut(s)	458, 519, 661
TatI	WGTACW	3 cut(s)	1072, 1293, 1452
TfiI	GAWTC	6 cut(s)	1010, 1032, 1066, 1248, 1340, 1553
Tru1I	TTAA	6 cut(s)	261, 336, 600, 710, 998, 1134
Tru9I	TTAA	6 cut(s)	261, 336, 600, 710, 998, 1134
TscAI	CASTG	5 cut(s)	426, 703, 976, 1047, 1593
TseFI	GTSAC	1 cut(s)	248
TseI	GCWGC	4 cut(s)	1472, 1475, 1478, 1649
Tsp45I	GTSAC	1 cut(s)	248
TspDTI	ATGAA	5 cut(s)	191, 666, 1209, 1542, 1676
TspRI	CASTG	5 cut(s)	426, 703, 976, 1047, 1593
Van91I	CCANNNNNTGG	1 cut(s)	1493
VpaK11BI	GGWCC	1 cut(s)	592
VspI	ATTAAT	1 cut(s)	600
XapI	RAATTY	3 cut(s)	24, 751, 1024
XcmI	CCANNNNNNNNNTGG	1 cut(s)	75
XmiI	GTMKAC	1 cut(s)	1335
XmnI	GAANNNNTTC	1 cut(s)	1280
XspI	CTAG	3 cut(s)	353, 1565, 1671
ZraI	GACGTC	1 cut(s)	100
ZrmI	AGTACT	3 cut(s)	1074, 1295, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.