Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0011427

Physical Location & Seq

Genomic Coordinates Reverse (-)

11287308 .. 11291968

Gene Structure 4661 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032134

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGGTAGAGAAGACGGTAAGCGAATTCGGAAACGAAAAGAAGAACACGAAAAGCCAAAGAGCATACCAGTCCTGCCATGGATGCGAACCCCAATTGACGTCAGCGCCTTGGACGAAAAACCCCTTTCTCTTCTGCCTCGCCTTGACCCCAGGTTGAAGGAGGCTTTGGAGAAGATGAAAATCTCATCCCTTTACCCAGTTCAGCTTGCTGTTTGGGAAGAGACTATTGGGCCTGGTGGGTTTCAGCGTGACTTGTGTGTTAATTCACCTACTGGAAGTGGGAAAACTTTGGCTTATGCTTTGCCAATTGTGCAAGCTTTGTCAACTCGCAATGTTAAATGTCTACGTGCTCTAGTTGTGTTGCCAACTCATGATTTGGCTTTGCAGGTCAAAGATGTGTTTTCTGCAATTGCTCCTGCAGTGGGCTTGTCAGTTGGTCTTGCAGTTGGGCAGTCTTCGATTGCCAATGAGATTTCAGAACTCATTGATAAGCCTAAGCTTGAGTTTGGTGTTTGTTTCGACCAAGAGTATCGTGTGCCTCAATTACGTAGTGCGGTGGACATATTGGTGGCTACCCCTGGAAGGCTAATGGACCATATTAATAACACTAAGGGATTTACGCTTGAGCATCTCTGTTATCTTGTTGTTGATGAAACAGATCGATTACTGAGGGAGGCATACCAGAATTGGCTGCCCACTGTGCTTCAATTAACTCGCTTTGATGATGATAGTTTACTTCCTCGTGCTCAAAATTTTCTACCTTCAGCATTTGGTTCCTTCAGAACCATAAGGAGATCTGGTCTTGAGAGGGGGTTTAGAGGTACACCTTACCCCAGGCTTGTGAAAATGGTTCTTTCTGCCACTTTGACCCAGGATCCAAGCAAGCTATCTCAACTTGATCTGCATCATCCTTTGTTCTTGACAACTGGAGAAATGCGTTATCGGCTTCCAGAAACATTGAAGTCCTACACTGTGTTCTGTGAAGCAAAGTACAAACCATTATATTTGGTTGCGCTCCTGCAAAGTTTAGGGGACGAGAAGTCCATCGTTTTTACATCATCAGTGGAGTCGACTCATCGTCTATGCACCTTACTGAACTTTTTTGATGAACTGCCTTTCAAGATAAAGGAGTATTCACGTGTTCAACGACATCGAAGCAAGACACTGGAGGCATTTCGGAAAGGAAAGATTCAAGTACTTGTTTCAACTGATGCAATGACTCGTGGAATGGATGTTGAAGGGGTGAGAAATGTGATTAACTATGATATGCCTGCCTACATAAAGACTTATGTTCACCGTGCGGGACGAACAGCAAGAGCTGGCCAAACTGGCTGTTGCTATTCATTATTGCGTGAAAAAGAGGTTCAACGATTCTACAAGATGTTACGCAAAGCTGAGAATAACTTCTGCTCTAAGTACTCTGTTCCTTCCAATTACATTGAACCGCTCCACGGTGTCTACGAATCTGGTAGATTCTTCTCATATATAGAATTTTTTTTTTCCCTTCATGTTGTTGACTCTGGGTGCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

511

Amino Acids

57.97

Weight (kDa)

9.19

Isoelectric Point (pI)

36.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	66 - 290	5.6e-28	DEAD/DEAH box helicase
ResIII	PF04851	82 - 229	3.2e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	335 - 441	2.1e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15850
fragaria_vesca	FvH4_3g05121 FvH4_3g05121
malus_domestica	MD05G1280500.v1.1
prunus_persica	Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1
pyrus_communis	pycom05g26080
rosa_chinensis	RchiOBHm_Chr5g0014641
rosa_laevigata	RLG00000032134
rosa_multiflora	Rmu_sc0000120.1_g000019
rosa_roxburghii	Rroxscaffold_1G00061820
rosa_rugosa	Rorug05G0019900 Rorug05G0020000
rosa_samantha	Rh5AG115600 Rh5BG112200 Rh5CG123800 Rh5DG112000
rosa_wichuraiana	Rw5G009980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	102
Acc36I	ACCTGC	1 cut(s)	376
AccB1I	GGYRCC	1 cut(s)	1524
AccBSI	CCGCTC	1 cut(s)	1447
AccI	GTMKAC	3 cut(s)	343, 1070, 1458
AciI	CCGC	3 cut(s)	554, 1301, 1445
AclWI	GGATC	2 cut(s)	869, 882
AcoI	YGGCCR	1 cut(s)	1321
AcsI	RAATTY	3 cut(s)	24, 751, 1490
AcuI	CTGAAG	2 cut(s)	747, 763
AcvI	CACGTG	1 cut(s)	1139
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	4 cut(s)	823, 992, 1197, 1418
AfiI	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
AflIII	ACRYGT	1 cut(s)	1138
AhdI	GACNNNNNGTC	2 cut(s)	1039, 1077
AjnI	CCWGG	5 cut(s)	149, 232, 577, 833, 870
AjuI	GAANNNNNNNTTGG	4 cut(s)	149, 181, 210, 242
AluBI	AGCT	6 cut(s)	205, 317, 499, 886, 1319, 1394
AluI	AGCT	6 cut(s)	205, 317, 499, 886, 1319, 1394
Alw21I	GWGCWC	2 cut(s)	352, 748
Alw26I	GTCTC	1 cut(s)	215
AlwI	GGATC	2 cut(s)	869, 882
AoxI	GGCC	2 cut(s)	230, 1321
ApeKI	GCWGC	1 cut(s)	691
ApoI	RAATTY	3 cut(s)	24, 751, 1490
AseI	ATTAAT	1 cut(s)	600
Asp700I	GAANNNNTTC	1 cut(s)	1403
AspLEI	GCGC	2 cut(s)	107, 1015
AspS9I	GGNCC	2 cut(s)	230, 592
AsuHPI	GGTGA	3 cut(s)	258, 1255, 1286
AvaII	GGWCC	1 cut(s)	592
BalI	TGGCCA	1 cut(s)	1323
BamHI	GGATCC	1 cut(s)	874
BanI	GGYRCC	1 cut(s)	1524
BauI	CACGAG	2 cut(s)	741, 1221
BbrPI	CACGTG	1 cut(s)	1139
BbsI	GAAGAC	2 cut(s)	18, 447
Bbv12I	GWGCWC	2 cut(s)	352, 748
BbvI	GCAGC	1 cut(s)	678
BccI	CCATC	1 cut(s)	1052
BciT130I	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BcoDI	GTCTC	1 cut(s)	215
BfaI	CTAG	1 cut(s)	353
BfmI	CTRYAG	1 cut(s)	417
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	376
BglI	GCCNNNNNGGC	1 cut(s)	1329
BglII	AGATCT	1 cut(s)	794
BisI	GCNGC	1 cut(s)	692
BlsI	GCNGC	1 cut(s)	693
BmcAI	AGTACT	2 cut(s)	1197, 1418
Bme1390I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
Bme18I	GGWCC	1 cut(s)	592
BmeRI	GACNNNNNGTC	2 cut(s)	1039, 1077
BmgT120I	GGNCC	2 cut(s)	230, 592
BmiI	GGNNCC	3 cut(s)	775, 876, 1526
BmrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
BmrI	ACTGGG	1 cut(s)	191
BmsI	GCATC	4 cut(s)	72, 637, 913, 1201
BmuI	ACTGGG	1 cut(s)	191
BpiI	GAAGAC	2 cut(s)	18, 447
BpmI	CTGGAG	2 cut(s)	948, 1187
Bpu10I	CCTNAGC	1 cut(s)	495
BpuEI	CTTGAG	3 cut(s)	521, 644, 824
Bsa29I	ATCGAT	1 cut(s)	661
BsaAI	YACGTR	3 cut(s)	347, 548, 1139
BsaBI	GATNNNNATC	2 cut(s)	179, 903
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	7 cut(s)	77, 108, 149, 577, 833, 870, 1450
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
Bse1I	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
Bse3DI	GCAATG	2 cut(s)	337, 1221
Bse8I	GATNNNNATC	2 cut(s)	179, 903
BseBI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BseCI	ATCGAT	1 cut(s)	661
BseDI	CCNNGG	7 cut(s)	77, 108, 149, 577, 833, 870, 1450
BseGI	GGATG	4 cut(s)	87, 185, 907, 1237
BseJI	GATNNNNATC	2 cut(s)	179, 903
BseLI	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
BseMI	GCAATG	2 cut(s)	337, 1221
BseMII	CTCAG	2 cut(s)	659, 1386
BseNI	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
BseXI	GCAGC	1 cut(s)	678
BshFI	GGCC	2 cut(s)	232, 1323
BshNI	GGYRCC	1 cut(s)	1524
BshVI	ATCGAT	1 cut(s)	661
BsiHKAI	GWGCWC	2 cut(s)	352, 748
BslFI	GGGAC	2 cut(s)	1046, 1317
BslI	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
BsmAI	GTCTC	1 cut(s)	215
BsmFI	GGGAC	2 cut(s)	1046, 1317
BsnI	GGCC	2 cut(s)	232, 1323
Bsp1286I	GDGCHC	2 cut(s)	352, 748
Bsp143I	GATC	4 cut(s)	658, 794, 874, 898
Bsp19I	CCATGG	1 cut(s)	77
BspACI	CCGC	3 cut(s)	554, 1301, 1445
BspANI	GGCC	2 cut(s)	232, 1323
BspCNI	CTCAG	2 cut(s)	660, 1387
BspDI	ATCGAT	1 cut(s)	661
BspHI	TCATGA	1 cut(s)	370
BspLI	GGNNCC	3 cut(s)	775, 876, 1526
BspMAI	CTGCAG	1 cut(s)	421
BspMI	ACCTGC	1 cut(s)	376
BspPI	GGATC	2 cut(s)	869, 882
BspT107I	GGYRCC	1 cut(s)	1524
BsrBI	CCGCTC	1 cut(s)	1447
BsrDI	GCAATG	2 cut(s)	337, 1221
BsrI	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
BssECI	CCNNGG	7 cut(s)	77, 108, 149, 577, 833, 870, 1450
BssMI	GATC	4 cut(s)	658, 794, 874, 898
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	2 cut(s)	741, 1221
BssT1I	CCWWGG	2 cut(s)	77, 108
Bst2BI	CACGAG	2 cut(s)	741, 1221
Bst2UI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
Bst4CI	ACNGT	5 cut(s)	17, 700, 973, 1298, 1454
Bst6I	CTCTTC	2 cut(s)	135, 213
BstACI	GRCGYC	1 cut(s)	99
BstBAI	YACGTR	3 cut(s)	347, 548, 1139
BstC8I	GCNNGC	5 cut(s)	207, 315, 884, 1272, 1321
BstDEI	CTNAG	5 cut(s)	495, 609, 668, 1395, 1413
BstDSI	CCRYGG	2 cut(s)	77, 1450
BstF5I	GGATG	4 cut(s)	87, 185, 907, 1237
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	2 cut(s)	107, 1015
BstKTI	GATC	4 cut(s)	661, 797, 877, 901
BstMAI	GTCTC	1 cut(s)	215
BstMBI	GATC	4 cut(s)	658, 794, 874, 898
BstMWI	GCNNNNNNNGC	5 cut(s)	82, 310, 700, 943, 1329
BstNI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BstSCI	CCNGG	5 cut(s)	149, 232, 577, 833, 870
BstSFI	CTRYAG	1 cut(s)	417
BstSNI	TACGTA	1 cut(s)	548
BstV1I	GCAGC	1 cut(s)	678
BstV2I	GAAGAC	2 cut(s)	18, 447
BstX2I	RGATCY	2 cut(s)	794, 874
BstYI	RGATCY	2 cut(s)	794, 874
Bsu15I	ATCGAT	1 cut(s)	661
BsuRI	GGCC	2 cut(s)	232, 1323
BsuTUI	ATCGAT	1 cut(s)	661
BtgI	CCRYGG	2 cut(s)	77, 1450
BtsCI	GGATG	4 cut(s)	87, 185, 907, 1237
BtsI	GCAGTG	1 cut(s)	426
BtsIMutI	CAGTG	5 cut(s)	426, 696, 969, 1068, 1163
BveI	ACCTGC	1 cut(s)	376
Cac8I	GCNNGC	5 cut(s)	207, 315, 884, 1272, 1321
CciI	TCATGA	1 cut(s)	370
CfoI	GCGC	2 cut(s)	107, 1015
Cfr13I	GGNCC	2 cut(s)	230, 592
ClaI	ATCGAT	1 cut(s)	661
Csp6I	GTAC	4 cut(s)	822, 991, 1196, 1417
CviAII	CATG	3 cut(s)	78, 371, 1508
CviQI	GTAC	4 cut(s)	822, 991, 1196, 1417
DdeI	CTNAG	5 cut(s)	495, 609, 668, 1395, 1413
DpnI	GATC	4 cut(s)	660, 796, 876, 900
DpnII	GATC	4 cut(s)	658, 794, 874, 898
DriI	GACNNNNNGTC	2 cut(s)	1039, 1077
EaeI	YGGCCR	1 cut(s)	1321
Eam1104I	CTCTTC	2 cut(s)	135, 213
Eam1105I	GACNNNNNGTC	2 cut(s)	1039, 1077
EarI	CTCTTC	2 cut(s)	135, 213
Eco105I	TACGTA	1 cut(s)	548
Eco130I	CCWWGG	2 cut(s)	77, 108
Eco47I	GGWCC	1 cut(s)	592
Eco57I	CTGAAG	2 cut(s)	747, 763
Eco72I	CACGTG	1 cut(s)	1139
EcoRI	GAATTC	1 cut(s)	24
EcoRII	CCWGG	5 cut(s)	149, 232, 577, 833, 870
EcoT14I	CCWWGG	2 cut(s)	77, 108
ErhI	CCWWGG	2 cut(s)	77, 108
FaeI	CATG	3 cut(s)	81, 374, 1511
FaqI	GGGAC	2 cut(s)	1046, 1317
FatI	CATG	3 cut(s)	77, 370, 1507
FauI	CCCGC	1 cut(s)	1294
FblI	GTMKAC	3 cut(s)	343, 1070, 1458
Fnu4HI	GCNGC	1 cut(s)	692
FokI	GGATG	4 cut(s)	94, 172, 894, 1244
Fsp4HI	GCNGC	1 cut(s)	692
FspBI	CTAG	1 cut(s)	353
GlaI	GCGC	2 cut(s)	106, 1014
GluI	GCNGC	1 cut(s)	692
GsuI	CTGGAG	2 cut(s)	948, 1187
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	2 cut(s)	232, 1323
HhaI	GCGC	2 cut(s)	107, 1015
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	3 cut(s)	81, 374, 1511
Hin6I	GCGC	2 cut(s)	105, 1013
HinP1I	GCGC	2 cut(s)	105, 1013
HincII	GTYRAC	3 cut(s)	324, 1071, 1516
HindII	GTYRAC	3 cut(s)	324, 1071, 1516
HindIII	AAGCTT	2 cut(s)	315, 497
HinfI	GANTC	8 cut(s)	1067, 1072, 1189, 1219, 1371, 1463, 1473, 1517
HphI	GGTGA	3 cut(s)	258, 1255, 1286
Hpy166II	GTNNAC	9 cut(s)	324, 344, 559, 734, 824, 1071, 1294, 1459, 1516
Hpy188I	TCNGA	4 cut(s)	30, 478, 782, 1179
Hpy188III	TCNNGA	5 cut(s)	371, 803, 919, 950, 1120
Hpy8I	GTNNAC	9 cut(s)	324, 344, 559, 734, 824, 1071, 1294, 1459, 1516
HpyAV	CCTTC	7 cut(s)	151, 576, 771, 787, 1232, 1437, 1514
HpyCH4III	ACNGT	5 cut(s)	17, 700, 973, 1298, 1454
HpyCH4IV	ACGT	4 cut(s)	99, 346, 547, 1138
HpyCH4V	TGCA	9 cut(s)	313, 385, 407, 419, 443, 904, 1021, 1086, 1214
HpyF10VI	GCNNNNNNNGC	5 cut(s)	82, 310, 700, 943, 1329
HpyF3I	CTNAG	5 cut(s)	495, 609, 668, 1395, 1413
HpySE526I	ACGT	4 cut(s)	99, 346, 547, 1138
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	3 cut(s)	81, 374, 1511
HspAI	GCGC	2 cut(s)	105, 1013
Kzo9I	GATC	4 cut(s)	658, 794, 874, 898
LmnI	GCTCC	3 cut(s)	418, 1020, 1452
Lsp1109I	GCAGC	1 cut(s)	678
LweI	GCATC	4 cut(s)	72, 637, 913, 1201
MaeI	CTAG	1 cut(s)	353
MaeII	ACGT	4 cut(s)	99, 346, 547, 1138
MaeIII	GTNAC	2 cut(s)	248, 1383
MalI	GATC	4 cut(s)	660, 796, 876, 900
MbiI	CCGCTC	1 cut(s)	1447
MboI	GATC	4 cut(s)	658, 794, 874, 898
MboII	GAAGA	7 cut(s)	23, 53, 122, 184, 230, 447, 1468
MfeI	CAATTG	3 cut(s)	93, 306, 408
MflI	RGATCY	2 cut(s)	794, 874
MhlI	GDGCHC	2 cut(s)	352, 748
MlsI	TGGCCA	1 cut(s)	1323
MluNI	TGGCCA	1 cut(s)	1323
MlyI	GAGTC	4 cut(s)	1066, 1076, 1213, 1511
Mox20I	TGGCCA	1 cut(s)	1323
MroXI	GAANNNNTTC	1 cut(s)	1403
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	5 cut(s)	261, 336, 600, 710, 1257
MslI	CAYNNNNRTG	1 cut(s)	566
Msp20I	TGGCCA	1 cut(s)	1323
MspR9I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
MunI	CAATTG	3 cut(s)	93, 306, 408
MvaI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
MwoI	GCNNNNNNNGC	5 cut(s)	82, 310, 700, 943, 1329
NcoI	CCATGG	1 cut(s)	77
NdeII	GATC	4 cut(s)	658, 794, 874, 898
NlaIII	CATG	3 cut(s)	81, 374, 1511
NlaIV	GGNNCC	3 cut(s)	775, 876, 1526
NmuCI	GTSAC	1 cut(s)	248
PagI	TCATGA	1 cut(s)	370
PcsI	WCGNNNNNNNCGW	2 cut(s)	1144, 1458
PdmI	GAANNNNTTC	1 cut(s)	1403
PfeI	GAWTC	4 cut(s)	1189, 1371, 1463, 1473
PkrI	GCNGC	1 cut(s)	693
PleI	GAGTC	4 cut(s)	1066, 1075, 1213, 1511
PmaCI	CACGTG	1 cut(s)	1139
PmlI	CACGTG	1 cut(s)	1139
PpsI	GAGTC	4 cut(s)	1066, 1075, 1213, 1511
Ppu21I	YACGTR	3 cut(s)	347, 548, 1139
PshBI	ATTAAT	1 cut(s)	600
Psp6I	CCWGG	5 cut(s)	149, 232, 577, 833, 870
PspCI	CACGTG	1 cut(s)	1139
PspGI	CCWGG	5 cut(s)	149, 232, 577, 833, 870
PspN4I	GGNNCC	3 cut(s)	775, 876, 1526
PspPI	GGNCC	2 cut(s)	230, 592
PstI	CTGCAG	1 cut(s)	421
PsuI	RGATCY	2 cut(s)	794, 874
RsaI	GTAC	4 cut(s)	823, 992, 1197, 1418
RsaNI	GTAC	4 cut(s)	822, 991, 1196, 1417
RseI	CAYNNNNRTG	1 cut(s)	566
SalI	GTCGAC	1 cut(s)	1069
SaqAI	TTAA	5 cut(s)	261, 336, 600, 710, 1257
SatI	GCNGC	1 cut(s)	692
Sau3AI	GATC	4 cut(s)	658, 794, 874, 898
Sau96I	GGNCC	2 cut(s)	230, 592
ScaI	AGTACT	2 cut(s)	1197, 1418
SchI	GAGTC	4 cut(s)	1066, 1076, 1213, 1511
ScrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
SduI	GDGCHC	2 cut(s)	352, 748
SfaNI	GCATC	4 cut(s)	72, 637, 913, 1201
SfcI	CTRYAG	1 cut(s)	417
SinI	GGWCC	1 cut(s)	592
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	3 cut(s)	500, 623, 803
SmoI	CTYRAG	3 cut(s)	500, 623, 803
SnaBI	TACGTA	1 cut(s)	548
SsiI	CCGC	3 cut(s)	554, 1301, 1445
SspMI	CTAG	1 cut(s)	353
StyD4I	CCNGG	5 cut(s)	149, 232, 577, 833, 870
StyI	CCWWGG	2 cut(s)	77, 108
TaaI	ACNGT	5 cut(s)	17, 700, 973, 1298, 1454
TaiI	ACGT	4 cut(s)	102, 349, 550, 1141
TaqI	TCGA	5 cut(s)	458, 519, 661, 1070, 1153
TatI	WGTACW	3 cut(s)	990, 1195, 1416
TfiI	GAWTC	4 cut(s)	1189, 1371, 1463, 1473
Tru1I	TTAA	5 cut(s)	261, 336, 600, 710, 1257
Tru9I	TTAA	5 cut(s)	261, 336, 600, 710, 1257
TscAI	CASTG	5 cut(s)	426, 703, 976, 1068, 1170
TseFI	GTSAC	1 cut(s)	248
TseI	GCWGC	1 cut(s)	691
Tsp45I	GTSAC	1 cut(s)	248
TspDTI	ATGAA	5 cut(s)	191, 666, 1122, 1332, 1496
TspRI	CASTG	5 cut(s)	426, 703, 976, 1068, 1170
VpaK11BI	GGWCC	1 cut(s)	592
VspI	ATTAAT	1 cut(s)	600
XapI	RAATTY	3 cut(s)	24, 751, 1490
XcmI	CCANNNNNNNNNTGG	1 cut(s)	75
XmiI	GTMKAC	3 cut(s)	343, 1070, 1458
XmnI	GAANNNNTTC	1 cut(s)	1403
XspI	CTAG	1 cut(s)	353
ZraI	GACGTC	1 cut(s)	100
ZrmI	AGTACT	2 cut(s)	1197, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.