Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0011427

Physical Location & Seq

Genomic Coordinates Reverse (-)

10173232 .. 10179117

Gene Structure 5886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG112000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGGGTAGAGAAGACGGTAAGCGAATTCGGAAACCAAAAGAAGAACACGAAAAGCCAAAGAGCATACCAGTCCTGCCATGGATGCGAACCCCAATTGACGTCAGCGCCTTGGACGAAAAACCCCTTTCTCTTCTGCCTCGCCTTGACCCCAGGTTGAAGGAGGCTTTGGAGAAGATGAAAATCTCATCCCTTTACCCAGTTCAGCTTGCTGTTTGGGAAGAGACTATTGGGCCTGGTGGGTTTCAGCGTGACTTGTGTGTTAATTCACCTACTGGAAGTGGGAAAACTCTGGCTTATGCTTTGCCAATTGTGCAAGCTTTGTCAACTCGCAATGTTAAATGCCTACGTGCTCTAGTTGTGTTGCCAACTCATGATTTAGCTTTGCAGGTCAAAGATGTGTTTTCTGCAATTGCTCCTGCAGTGGGCTTGTCAGTTGGTCTTGCAGTTGGGCAAACTTCAATTGCCAATGAGATTTCAGAACTTATTGATAAGCCTAAGCTTGAGTTTGGCGTTTGTTTCGACCAAGTGGATCGTGCGCCTCAATTACGTAGTGCGGTGGACATATTGGTGGCTACCCCTGGAAGGCTAATGGACCATATCAATAACACTAAGGGATTTACGCTTGAGCATCTCTGTTATCTTGTTGTTGATGAAACAGATCGATTACTCAGGGAGGCATACCAGAATTGGCTACCCACTGTGCTTCAATTAACTCGCTTTGATGATGATAGTTTATTTCCTCGTGCTCAAAATTTTCTACCTTCAGCATTTGGTTCCTTCAGAACCATAAGGAGATCTGGTCTTGAGAGGGGGTTTAGAGGTACACCTTACCCCAGGCTTGTGAAGATGGTTCTTTCTGCCACTTTGACCCAGGATCCAAGCAAGCTATCTCAACTTGATCTGCATCATCCTTTGTTCTTGACAACTGGAGAAATGCGTTATCGGCTTCCAGAAACATTGAAGTCCTACACTGTGTTCTGTGAAGCAAAGTACAAACCATTATATTTGGTTGCGCTCCTGCAAAGTTTAGGGGACGAGAAGTCCATCGTTTTTACATCATCAGTGGAGTCGACTCATCGTCTATGCACCTTACTGAACTTTTTTGATGAACTGCCTTTCAAGATAAAGGAGTATTCACGCGTTCAACGACATCGAAGCAAGACACTGGAGGCATTTCGGAAAGGAAAGATTCAAGTACTTGTTTCAACTGATGCAATGACTCGTGGAATGGATGTTGAAGGGGTGAGAAATGTGATTAACTATGATATGCCTGCCTACATAAAGACTTATGTTCACCGTGTGGGACGAACAGCAAGAGCTGGCCAAACTGGCTGTTGCTATTCATTATTGCGTGAAAAAGAGGTATGCTTGGTCTTGTTAATCTCTACACCAACACATGTTTCAAGTCAAGGCTTGATGGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017151 GO:0019899 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

474

Amino Acids

53.29

Weight (kDa)

9.18

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	66 - 290	4.4e-28	DEAD/DEAH box helicase
ResIII	PF04851	82 - 229	2.7e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	335 - 441	1.4e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15850
fragaria_vesca	FvH4_3g05121 FvH4_3g05121
malus_domestica	MD05G1280500.v1.1
prunus_persica	Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1 Prupe.4G084900_v2.0.a1
pyrus_communis	pycom05g26080
rosa_chinensis	RchiOBHm_Chr5g0014641
rosa_laevigata	RLG00000032134
rosa_multiflora	Rmu_sc0000120.1_g000019
rosa_roxburghii	Rroxscaffold_1G00061820
rosa_rugosa	Rorug05G0019900 Rorug05G0020000
rosa_samantha	Rh5AG115600 Rh5BG112200 Rh5CG123800 Rh5DG112000
rosa_wichuraiana	Rw5G009980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	102
Acc36I	ACCTGC	1 cut(s)	376
AccI	GTMKAC	1 cut(s)	1070
AccII	CGCG	1 cut(s)	1140
AciI	CCGC	1 cut(s)	554
AclWI	GGATC	3 cut(s)	537, 869, 882
AcoI	YGGCCR	1 cut(s)	1321
AcsI	RAATTY	2 cut(s)	24, 751
AcuI	CTGAAG	2 cut(s)	747, 763
AcyI	GRCGYC	1 cut(s)	99
AdeI	CACNNNGTG	1 cut(s)	1300
AfaI	GTAC	3 cut(s)	823, 992, 1197
AfiI	CCNNNNNNNGG	2 cut(s)	422, 582
AflIII	ACRYGT	2 cut(s)	1138, 1396
AhdI	GACNNNNNGTC	2 cut(s)	1039, 1077
AjnI	CCWGG	5 cut(s)	149, 232, 577, 833, 870
AjuI	GAANNNNNNNTTGG	6 cut(s)	149, 181, 210, 242, 1384, 1416
AluBI	AGCT	6 cut(s)	205, 317, 380, 499, 886, 1319
AluI	AGCT	6 cut(s)	205, 317, 380, 499, 886, 1319
Alw21I	GWGCWC	2 cut(s)	352, 748
Alw26I	GTCTC	1 cut(s)	215
AlwI	GGATC	3 cut(s)	537, 869, 882
AoxI	GGCC	2 cut(s)	230, 1321
ApoI	RAATTY	2 cut(s)	24, 751
AspLEI	GCGC	3 cut(s)	107, 538, 1015
AspS9I	GGNCC	2 cut(s)	230, 592
AsuHPI	GGTGA	3 cut(s)	258, 1255, 1286
AvaII	GGWCC	1 cut(s)	592
BalI	TGGCCA	1 cut(s)	1323
BamHI	GGATCC	1 cut(s)	874
BauI	CACGAG	2 cut(s)	741, 1221
BbsI	GAAGAC	1 cut(s)	18
Bbv12I	GWGCWC	2 cut(s)	352, 748
BccI	CCATC	3 cut(s)	841, 1052, 1411
BciT130I	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BcoDI	GTCTC	1 cut(s)	215
BfaI	CTAG	1 cut(s)	353
BfmI	CTRYAG	1 cut(s)	417
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	376
BglI	GCCNNNNNGGC	1 cut(s)	1329
BglII	AGATCT	1 cut(s)	794
BmcAI	AGTACT	1 cut(s)	1197
Bme1390I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
Bme18I	GGWCC	1 cut(s)	592
BmeRI	GACNNNNNGTC	2 cut(s)	1039, 1077
BmgT120I	GGNCC	2 cut(s)	230, 592
BmiI	GGNNCC	2 cut(s)	775, 876
BmrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
BmrI	ACTGGG	1 cut(s)	191
BmsI	GCATC	4 cut(s)	72, 637, 913, 1201
BmuI	ACTGGG	1 cut(s)	191
BpiI	GAAGAC	1 cut(s)	18
BpmI	CTGGAG	2 cut(s)	948, 1187
Bpu10I	CCTNAGC	1 cut(s)	495
BpuEI	CTTGAG	3 cut(s)	521, 644, 824
Bsa29I	ATCGAT	1 cut(s)	661
BsaAI	YACGTR	2 cut(s)	347, 548
BsaBI	GATNNNNATC	2 cut(s)	179, 903
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	6 cut(s)	77, 108, 149, 577, 833, 870
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	2 cut(s)	422, 582
Bse1I	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
Bse3DI	GCAATG	2 cut(s)	337, 1221
Bse8I	GATNNNNATC	2 cut(s)	179, 903
BseBI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BseCI	ATCGAT	1 cut(s)	661
BseDI	CCNNGG	6 cut(s)	77, 108, 149, 577, 833, 870
BseGI	GGATG	4 cut(s)	87, 185, 907, 1237
BseJI	GATNNNNATC	2 cut(s)	179, 903
BseLI	CCNNNNNNNGG	2 cut(s)	422, 582
BseMI	GCAATG	2 cut(s)	337, 1221
BseMII	CTCAG	1 cut(s)	682
BseNI	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
Bsh1236I	CGCG	1 cut(s)	1140
BshFI	GGCC	2 cut(s)	232, 1323
BshVI	ATCGAT	1 cut(s)	661
BsiHKAI	GWGCWC	2 cut(s)	352, 748
BslFI	GGGAC	2 cut(s)	1046, 1317
BslI	CCNNNNNNNGG	2 cut(s)	422, 582
BsmAI	GTCTC	1 cut(s)	215
BsmFI	GGGAC	2 cut(s)	1046, 1317
BsnI	GGCC	2 cut(s)	232, 1323
Bsp1286I	GDGCHC	2 cut(s)	352, 748
Bsp143I	GATC	5 cut(s)	529, 658, 794, 874, 898
Bsp19I	CCATGG	1 cut(s)	77
BspACI	CCGC	1 cut(s)	554
BspANI	GGCC	2 cut(s)	232, 1323
BspCNI	CTCAG	1 cut(s)	681
BspDI	ATCGAT	1 cut(s)	661
BspFNI	CGCG	1 cut(s)	1140
BspHI	TCATGA	1 cut(s)	370
BspLI	GGNNCC	2 cut(s)	775, 876
BspMAI	CTGCAG	1 cut(s)	421
BspMI	ACCTGC	1 cut(s)	376
BspPI	GGATC	3 cut(s)	537, 869, 882
BsrDI	GCAATG	2 cut(s)	337, 1221
BsrI	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
BssECI	CCNNGG	6 cut(s)	77, 108, 149, 577, 833, 870
BssMI	GATC	5 cut(s)	529, 658, 794, 874, 898
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	2 cut(s)	741, 1221
BssT1I	CCWWGG	2 cut(s)	77, 108
Bst2BI	CACGAG	2 cut(s)	741, 1221
Bst2UI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
Bst4CI	ACNGT	4 cut(s)	17, 700, 973, 1298
Bst6I	CTCTTC	2 cut(s)	135, 213
BstACI	GRCGYC	1 cut(s)	99
BstBAI	YACGTR	2 cut(s)	347, 548
BstC8I	GCNNGC	5 cut(s)	207, 315, 884, 1272, 1321
BstDEI	CTNAG	3 cut(s)	495, 609, 668
BstDSI	CCRYGG	1 cut(s)	77
BstF5I	GGATG	4 cut(s)	87, 185, 907, 1237
BstFNI	CGCG	1 cut(s)	1140
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	3 cut(s)	107, 538, 1015
BstKTI	GATC	5 cut(s)	532, 661, 797, 877, 901
BstMAI	GTCTC	1 cut(s)	215
BstMBI	GATC	5 cut(s)	529, 658, 794, 874, 898
BstMWI	GCNNNNNNNGC	4 cut(s)	82, 310, 943, 1329
BstNI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
BstNSI	RCATGY	1 cut(s)	1400
BstSCI	CCNGG	5 cut(s)	149, 232, 577, 833, 870
BstSFI	CTRYAG	1 cut(s)	417
BstSNI	TACGTA	1 cut(s)	548
BstUI	CGCG	1 cut(s)	1140
BstV2I	GAAGAC	1 cut(s)	18
BstX2I	RGATCY	2 cut(s)	794, 874
BstYI	RGATCY	2 cut(s)	794, 874
Bsu15I	ATCGAT	1 cut(s)	661
BsuRI	GGCC	2 cut(s)	232, 1323
BsuTUI	ATCGAT	1 cut(s)	661
BtgI	CCRYGG	1 cut(s)	77
BtsCI	GGATG	4 cut(s)	87, 185, 907, 1237
BtsI	GCAGTG	1 cut(s)	426
BtsIMutI	CAGTG	5 cut(s)	426, 696, 969, 1068, 1163
BveI	ACCTGC	1 cut(s)	376
Cac8I	GCNNGC	5 cut(s)	207, 315, 884, 1272, 1321
CciI	TCATGA	1 cut(s)	370
CfoI	GCGC	3 cut(s)	107, 538, 1015
Cfr13I	GGNCC	2 cut(s)	230, 592
ClaI	ATCGAT	1 cut(s)	661
Csp6I	GTAC	3 cut(s)	822, 991, 1196
CviAII	CATG	3 cut(s)	78, 371, 1397
CviQI	GTAC	3 cut(s)	822, 991, 1196
DdeI	CTNAG	3 cut(s)	495, 609, 668
DpnI	GATC	5 cut(s)	531, 660, 796, 876, 900
DpnII	GATC	5 cut(s)	529, 658, 794, 874, 898
DraIII	CACNNNGTG	1 cut(s)	1300
DriI	GACNNNNNGTC	2 cut(s)	1039, 1077
EaeI	YGGCCR	1 cut(s)	1321
Eam1104I	CTCTTC	2 cut(s)	135, 213
Eam1105I	GACNNNNNGTC	2 cut(s)	1039, 1077
EarI	CTCTTC	2 cut(s)	135, 213
Eco105I	TACGTA	1 cut(s)	548
Eco130I	CCWWGG	2 cut(s)	77, 108
Eco47I	GGWCC	1 cut(s)	592
Eco57I	CTGAAG	2 cut(s)	747, 763
EcoRI	GAATTC	1 cut(s)	24
EcoRII	CCWGG	5 cut(s)	149, 232, 577, 833, 870
EcoT14I	CCWWGG	2 cut(s)	77, 108
ErhI	CCWWGG	2 cut(s)	77, 108
FaeI	CATG	3 cut(s)	81, 374, 1400
FaqI	GGGAC	2 cut(s)	1046, 1317
FatI	CATG	3 cut(s)	77, 370, 1396
FblI	GTMKAC	1 cut(s)	1070
FokI	GGATG	4 cut(s)	94, 172, 894, 1244
FspBI	CTAG	1 cut(s)	353
GlaI	GCGC	3 cut(s)	106, 537, 1014
GsuI	CTGGAG	2 cut(s)	948, 1187
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	2 cut(s)	232, 1323
HhaI	GCGC	3 cut(s)	107, 538, 1015
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	3 cut(s)	81, 374, 1400
Hin6I	GCGC	3 cut(s)	105, 536, 1013
HinP1I	GCGC	3 cut(s)	105, 536, 1013
HincII	GTYRAC	2 cut(s)	324, 1071
HindII	GTYRAC	2 cut(s)	324, 1071
HindIII	AAGCTT	2 cut(s)	315, 497
HinfI	GANTC	4 cut(s)	1067, 1072, 1189, 1219
HphI	GGTGA	3 cut(s)	258, 1255, 1286
Hpy166II	GTNNAC	5 cut(s)	324, 559, 824, 1071, 1294
Hpy188I	TCNGA	4 cut(s)	30, 478, 782, 1179
Hpy188III	TCNNGA	5 cut(s)	371, 803, 919, 950, 1120
Hpy8I	GTNNAC	5 cut(s)	324, 559, 824, 1071, 1294
HpyAV	CCTTC	5 cut(s)	151, 576, 771, 787, 1232
HpyCH4III	ACNGT	4 cut(s)	17, 700, 973, 1298
HpyCH4IV	ACGT	3 cut(s)	99, 346, 547
HpyCH4V	TGCA	9 cut(s)	313, 385, 407, 419, 443, 904, 1021, 1086, 1214
HpyF10VI	GCNNNNNNNGC	4 cut(s)	82, 310, 943, 1329
HpyF3I	CTNAG	3 cut(s)	495, 609, 668
HpySE526I	ACGT	3 cut(s)	99, 346, 547
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	3 cut(s)	81, 374, 1400
HspAI	GCGC	3 cut(s)	105, 536, 1013
Kzo9I	GATC	5 cut(s)	529, 658, 794, 874, 898
LmnI	GCTCC	2 cut(s)	418, 1020
LweI	GCATC	4 cut(s)	72, 637, 913, 1201
MaeI	CTAG	1 cut(s)	353
MaeII	ACGT	3 cut(s)	99, 346, 547
MaeIII	GTNAC	1 cut(s)	248
MalI	GATC	5 cut(s)	531, 660, 796, 876, 900
MboI	GATC	5 cut(s)	529, 658, 794, 874, 898
MboII	GAAGA	6 cut(s)	23, 53, 122, 184, 230, 856
MfeI	CAATTG	4 cut(s)	93, 306, 408, 459
MflI	RGATCY	2 cut(s)	794, 874
MhlI	GDGCHC	2 cut(s)	352, 748
MlsI	TGGCCA	1 cut(s)	1323
MluI	ACGCGT	1 cut(s)	1138
MluNI	TGGCCA	1 cut(s)	1323
MlyI	GAGTC	3 cut(s)	1066, 1076, 1213
MnlI	CCTC	9 cut(s)	147, 154, 549, 667, 750, 801, 812, 1162, 1354
Mox20I	TGGCCA	1 cut(s)	1323
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	5 cut(s)	261, 336, 710, 1257, 1379
MslI	CAYNNNNRTG	1 cut(s)	566
Msp20I	TGGCCA	1 cut(s)	1323
MspR9I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
MunI	CAATTG	4 cut(s)	93, 306, 408, 459
MvaI	CCWGG	5 cut(s)	151, 234, 579, 835, 872
MvnI	CGCG	1 cut(s)	1140
MwoI	GCNNNNNNNGC	4 cut(s)	82, 310, 943, 1329
NcoI	CCATGG	1 cut(s)	77
NdeII	GATC	5 cut(s)	529, 658, 794, 874, 898
NlaIII	CATG	3 cut(s)	81, 374, 1400
NlaIV	GGNNCC	2 cut(s)	775, 876
NmuCI	GTSAC	1 cut(s)	248
NspI	RCATGY	1 cut(s)	1400
PagI	TCATGA	1 cut(s)	370
PciI	ACATGT	1 cut(s)	1396
PcsI	WCGNNNNNNNCGW	1 cut(s)	1144
PfeI	GAWTC	1 cut(s)	1189
PleI	GAGTC	3 cut(s)	1066, 1075, 1213
PpsI	GAGTC	3 cut(s)	1066, 1075, 1213
Ppu21I	YACGTR	2 cut(s)	347, 548
PscI	ACATGT	1 cut(s)	1396
Psp6I	CCWGG	5 cut(s)	149, 232, 577, 833, 870
PspGI	CCWGG	5 cut(s)	149, 232, 577, 833, 870
PspN4I	GGNNCC	2 cut(s)	775, 876
PspPI	GGNCC	2 cut(s)	230, 592
PstI	CTGCAG	1 cut(s)	421
PsuI	RGATCY	2 cut(s)	794, 874
RsaI	GTAC	3 cut(s)	823, 992, 1197
RsaNI	GTAC	3 cut(s)	822, 991, 1196
RseI	CAYNNNNRTG	1 cut(s)	566
SalI	GTCGAC	1 cut(s)	1069
SaqAI	TTAA	5 cut(s)	261, 336, 710, 1257, 1379
Sau3AI	GATC	5 cut(s)	529, 658, 794, 874, 898
Sau96I	GGNCC	2 cut(s)	230, 592
ScaI	AGTACT	1 cut(s)	1197
SchI	GAGTC	3 cut(s)	1066, 1076, 1213
ScrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
SduI	GDGCHC	2 cut(s)	352, 748
SfaNI	GCATC	4 cut(s)	72, 637, 913, 1201
SfcI	CTRYAG	1 cut(s)	417
SinI	GGWCC	1 cut(s)	592
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	3 cut(s)	500, 623, 803
SmoI	CTYRAG	3 cut(s)	500, 623, 803
SnaBI	TACGTA	1 cut(s)	548
SsiI	CCGC	1 cut(s)	554
SspMI	CTAG	1 cut(s)	353
StyD4I	CCNGG	5 cut(s)	149, 232, 577, 833, 870
StyI	CCWWGG	2 cut(s)	77, 108
TaaI	ACNGT	4 cut(s)	17, 700, 973, 1298
TaiI	ACGT	3 cut(s)	102, 349, 550
TaqI	TCGA	4 cut(s)	519, 661, 1070, 1153
TatI	WGTACW	2 cut(s)	990, 1195
TfiI	GAWTC	1 cut(s)	1189
Tru1I	TTAA	5 cut(s)	261, 336, 710, 1257, 1379
Tru9I	TTAA	5 cut(s)	261, 336, 710, 1257, 1379
TscAI	CASTG	5 cut(s)	426, 703, 976, 1068, 1170
TseFI	GTSAC	1 cut(s)	248
Tsp45I	GTSAC	1 cut(s)	248
TspDTI	ATGAA	4 cut(s)	191, 666, 1122, 1332
TspRI	CASTG	5 cut(s)	426, 703, 976, 1068, 1170
VpaK11BI	GGWCC	1 cut(s)	592
XapI	RAATTY	2 cut(s)	24, 751
XceI	RCATGY	1 cut(s)	1400
XcmI	CCANNNNNNNNNTGG	1 cut(s)	75
XmiI	GTMKAC	1 cut(s)	1070
XspI	CTAG	1 cut(s)	353
ZraI	GACGTC	1 cut(s)	100
ZrmI	AGTACT	1 cut(s)	1197

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.