pycom05g32930

Nuclear inhibitor of protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
32130522 .. 32130915
394 bp
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UTR
Exon/CDS
Intron
pycom05g32930.2

Sequence Viewer

Length: 333 bp
ATGGTGTGGACCCCTTGTGCAGATTACAGTAATCCCCAAAGGGGAGGAACAATTATATGTCAAGGAAGGCAATTCTTCCTAAAAGGCATGACTGAAAAATTACAGGTCTTAAATAGAGTCAAAACTGCTCCAAAGGGTGGGATTTATGATGACCTTTATGGGGAATTTTTTTCTGGCAAAGTGGGTTCGTCATGGGCATATCCTTCTTCTGTGGACTCGAGTGGTGGACGAGCCTCTCCAAGTAGAGATACTGATGGGAAGGCATTAAGTGTAAACCATGGAACTAACTCAAGTCACGTTGACGATGACGAAGATGATTTGTTTGGTGATTGA

Protein Analysis

111

Amino Acids

11.9

Weight (kDa)

4.99

Isoelectric Point (pI)

22.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012083)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 137
AcsI RAATTY 1 cut(s) 164
AfiI CCNNNNNNNGG 3 cut(s) 41, 137, 160
Ama87I CYCGRG 1 cut(s) 217
ApoI RAATTY 1 cut(s) 164
AspS9I GGNCC 1 cut(s) 9
AvaI CYCGRG 1 cut(s) 217
AvaII GGWCC 1 cut(s) 9
BccI CCATC 1 cut(s) 248
Bme18I GGWCC 1 cut(s) 9
BmeT110I CYCGRG 1 cut(s) 217
BmgT120I GGNCC 1 cut(s) 9
BmiI GGNNCC 1 cut(s) 11
BpuEI CTTGAG 1 cut(s) 274
BsaJI CCNNGG 1 cut(s) 277
Bsc4I CCNNNNNNNGG 3 cut(s) 41, 137, 160
BseDI CCNNGG 1 cut(s) 277
BseLI CCNNNNNNNGG 3 cut(s) 41, 137, 160
BsgI GTGCAG 1 cut(s) 39
BsiHKCI CYCGRG 1 cut(s) 217
BslI CCNNNNNNNGG 3 cut(s) 41, 137, 160
BsoBI CYCGRG 1 cut(s) 217
Bsp19I CCATGG 1 cut(s) 277
BspLI GGNNCC 1 cut(s) 11
BssECI CCNNGG 1 cut(s) 277
BssT1I CCWWGG 1 cut(s) 277
Bst4CI ACNGT 1 cut(s) 29
BstDSI CCRYGG 1 cut(s) 277
BtgI CCRYGG 1 cut(s) 277
Cfr13I GGNCC 1 cut(s) 9
CviAII CATG 3 cut(s) 88, 192, 278
CviJI RGCY 1 cut(s) 233
CviKI_1 RGCY 1 cut(s) 233
Eco130I CCWWGG 1 cut(s) 277
Eco47I GGWCC 1 cut(s) 9
Eco88I CYCGRG 1 cut(s) 217
EcoT14I CCWWGG 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 277
FaeI CATG 3 cut(s) 91, 195, 281
FaiI YATR 8 cut(s) 56, 58, 89, 147, 159, 193, 199, 279
FatI CATG 3 cut(s) 87, 191, 277
Hin1II CATG 3 cut(s) 91, 195, 281
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 2 cut(s) 117, 215
Hpy166II GTNNAC 5 cut(s) 9, 214, 227, 274, 301
Hpy8I GTNNAC 5 cut(s) 9, 214, 227, 274, 301
HpyAV CCTTC 3 cut(s) 60, 213, 253
HpyCH4III ACNGT 1 cut(s) 29
HpyCH4IV ACGT 1 cut(s) 297
HpyCH4V TGCA 1 cut(s) 20
HpySE526I ACGT 1 cut(s) 297
Hsp92II CATG 3 cut(s) 91, 195, 281
LmnI GCTCC 1 cut(s) 133
LpnPI CCDG 2 cut(s) 89, 159
MaeII ACGT 1 cut(s) 297
MaeIII GTNAC 1 cut(s) 293
MboII GAAGA 3 cut(s) 67, 198, 323
MluCI AATT 4 cut(s) 51, 71, 98, 164
MlyI GAGTC 2 cut(s) 126, 209
MnlI CCTC 2 cut(s) 38, 244
MseI TTAA 2 cut(s) 110, 266
NcoI CCATGG 1 cut(s) 277
NlaIII CATG 3 cut(s) 91, 195, 281
NlaIV GGNNCC 1 cut(s) 11
NmuCI GTSAC 1 cut(s) 293
PaeR7I CTCGAG 1 cut(s) 217
PflMI CCANNNNNTGG 1 cut(s) 137
PleI GAGTC 2 cut(s) 125, 209
PpsI GAGTC 2 cut(s) 125, 209
PspN4I GGNNCC 1 cut(s) 11
PspPI GGNCC 1 cut(s) 9
PspXI VCTCGAGB 1 cut(s) 217
SaqAI TTAA 2 cut(s) 110, 266
Sau96I GGNCC 1 cut(s) 9
SchI GAGTC 2 cut(s) 126, 209
SetI ASST 3 cut(s) 108, 156, 300
Sfr274I CTCGAG 1 cut(s) 217
SinI GGWCC 1 cut(s) 9
SlaI CTCGAG 1 cut(s) 217
SmlI CTYRAG 2 cut(s) 217, 289
SmoI CTYRAG 2 cut(s) 217, 289
Sse9I AATT 4 cut(s) 51, 71, 98, 164
StyI CCWWGG 1 cut(s) 277
TaaI ACNGT 1 cut(s) 29
TaiI ACGT 1 cut(s) 300
TaqI TCGA 1 cut(s) 218
TasI AATT 4 cut(s) 51, 71, 98, 164
Tru1I TTAA 2 cut(s) 110, 266
Tru9I TTAA 2 cut(s) 110, 266
TseFI GTSAC 1 cut(s) 293
Tsp45I GTSAC 1 cut(s) 293
Van91I CCANNNNNTGG 1 cut(s) 137
VpaK11BI GGWCC 1 cut(s) 9
XapI RAATTY 1 cut(s) 164
XhoI CTCGAG 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.