Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0012083

Physical Location & Seq

Genomic Coordinates Forward (+)

314480 .. 316749

Gene Structure 2270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG003500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1269 bp

ATGCCAGTCAGAATCTTCGGAAGGAAGGAAAGGAAGAATTGCATCCATCCATCCATCATGTACGGCAGAGCTGGGCTTGATAGATTTAGGAAAGCTCAGTCCTTGGAACCCTTCTCAGTGAATGCCAATGCGAAATCCAAATCCTCCACTCCAGCTCAGAAGAAGAGCCCCCCTGCTGCTGTTGCTGTTGCTGTTCAGGAGGCCGGCCCTCAGCATCAGCATCTGACTCAGATTGGTGAGGGTCAGTCGAGTTGGCAGCCCCCCGAGTGGGCAATGGATCCCCGCCCTGGTGTTTATTTTCTTCAAGTCTTGAAGGATGGTCAGCTTCTCGACCGCATTCCTCTTGATAGGCGCCGCAACATCTTTGGCCGCCAATCTCATACTTGTGATTTTGTGCTTGATCATCAGTCTGTTTCCCGCCAGCATGCTGTTGTTGTTCCTCACAAGAATGGAAGCATATATGTAATTGATTTGGGATCTGCGCACGGTACTTTTGTTGCAAACGAACGCGTGACTAAAGATACCCCTGTTGAGCTTGAAGTTGGGCAGTCTTTGCGGTTTGCTGCATCAACTAGAACTTATGTCTTAAGAAAGAACGATGCAGCTCTTTTTCCTCGTCCTCCAATGCCTTCCGAGGTTGACCTGCCACCACCACCTGATCCATCTGATGAAGAAGCTGTCGTCGCTTATAATACGCTTCTAAATCGTTATGGTCTGACCAGGTCTAGCAAACTGCCTAGGCCCAATGAGTCAGCTAACTCCGCAAACAAAAAAGGTGACACCCAGCATCCGGAGAGAGCCTCTAAGAGAATTAAGAAGGCAAGAGTATCATTCAGGGATCAAGTTGGAGGAGAGTTGGTTGAAGTTGTTGGTATATCAGATGGTGTGGATGTAGAAACAGAACCTGGTCCGATAGGTGTAAAAGAAGGGCAAAGTCTTGTTGGAAAATATGGATCCCTTGTACAGACTACAGTAATTCCCAAAGGGAAGGAGCAATCATCTGCCAAGGAAGCGAATAATTCCCACAAGGGGATGACTGAAAAATTACAACAAGTCTTAGATAGAGTCAAAACTGCTCCAAAAGGTGGGATATATGATGACCTTTATGGAGAATCTTATTCGGGCAAAGTGGGCACTTCCTGGGCATATCCTTCACTTAGTTCCACTGCCTCTCCAAGTAAAGACTCTGATGAAAAGCCATCGAATGCAAACCATGGAACTAACTCAGGCCAAGTTGATGATGACGAGGATGATTTATTTGGAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0008150 GO:0009892 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016604 GO:0016607 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032515 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0080090 GO:0097159 GO:0098772 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

422

Amino Acids

46.08

Weight (kDa)

8.59

Isoelectric Point (pI)

42.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	113 - 184	2e-06	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	121 - 187	5.3e-19	FHA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47790
fragaria_vesca	FvH4_3g00210
malus_domestica	MD05G1362800.v1.1 MD10G1340400.v1.1
prunus_persica	Prupe.4G002500_v2.0.a1 Prupe.4G002500_v2.0.a1 Prupe.4G002500_v2.0.a1
pyrus_communis	pycom05g32930 pycom10g29020
rosa_chinensis	RchiOBHm_Chr5g0000281
rosa_laevigata	RLG00000030856
rosa_multiflora	Rmu_ssc0000385.1_g000005
rosa_roxburghii	Rroxscaffold_1G00075830
rosa_rugosa	Rorug04G0383000
rosa_samantha	Rh5AG002100 Rh5BG003500 Rh5CG002400 Rh5DG002400
rosa_wichuraiana	Rw5G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	690
Acc16I	TGCGCA	1 cut(s)	483
Acc36I	ACCTGC	1 cut(s)	651
AccB1I	GGYRCC	1 cut(s)	351
AccB7I	CCANNNNNTGG	1 cut(s)	1085
AccII	CGCG	1 cut(s)	510
AccIII	TCCGGA	1 cut(s)	790
AciI	CCGC	7 cut(s)	283, 334, 355, 370, 418, 556, 762
AclWI	GGATC	7 cut(s)	272, 285, 484, 653, 846, 948, 961
AcoI	YGGCCR	1 cut(s)	367
AcyI	GRCGYC	1 cut(s)	352
AfaI	GTAC	3 cut(s)	62, 490, 963
AfiI	CCNNNNNNNGG	6 cut(s)	267, 268, 287, 790, 1029, 1085
AflII	CTTAAG	1 cut(s)	586
AflIII	ACRYGT	1 cut(s)	508
AgsI	TTSAA	4 cut(s)	305, 313, 539, 863
AjnI	CCWGG	4 cut(s)	286, 719, 904, 1139
AluBI	AGCT	8 cut(s)	71, 95, 155, 325, 535, 605, 677, 755
AluI	AGCT	8 cut(s)	71, 95, 155, 325, 535, 605, 677, 755
Alw26I	GTCTC	1 cut(s)	1257
AlwI	GGATC	7 cut(s)	272, 285, 484, 653, 846, 948, 961
AlwNI	CAGNNNCTG	2 cut(s)	223, 905
Ama87I	CYCGRG	1 cut(s)	263
Aor13HI	TCCGGA	1 cut(s)	790
AoxI	GGCC	5 cut(s)	201, 205, 367, 740, 1228
ApeKI	GCWGC	4 cut(s)	176, 256, 563, 602
AspA2I	CCTAGG	1 cut(s)	737
AspLEI	GCGC	2 cut(s)	354, 484
AspS9I	GGNCC	3 cut(s)	206, 741, 908
AsuHPI	GGTGA	2 cut(s)	248, 788
AvaI	CYCGRG	1 cut(s)	263
AvaII	GGWCC	1 cut(s)	908
AvrII	CCTAGG	1 cut(s)	737
BaeGI	GKGCMC	1 cut(s)	1136
BaeI	ACNNNNGTAYC	4 cut(s)	480, 513, 513, 546
BamHI	GGATCC	2 cut(s)	277, 953
BanI	GGYRCC	1 cut(s)	351
BanII	GRGCYC	1 cut(s)	170
BbvCI	CCTCAGC	1 cut(s)	210
BbvI	GCAGC	4 cut(s)	163, 268, 550, 614
BccI	CCATC	7 cut(s)	54, 58, 62, 311, 670, 875, 1207
BceAI	ACGGC	1 cut(s)	79
BciT130I	CCWGG	4 cut(s)	288, 721, 906, 1141
BclI	TGATCA	1 cut(s)	400
BcoDI	GTCTC	1 cut(s)	1257
BfaI	CTAG	3 cut(s)	573, 726, 738
BfmI	CTRYAG	1 cut(s)	969
BfoI	RGCGCY	1 cut(s)	355
BfrI	CTTAAG	1 cut(s)	586
BfuAI	ACCTGC	1 cut(s)	651
BisI	GCNGC	6 cut(s)	177, 257, 355, 370, 564, 603
BlnI	CCTAGG	1 cut(s)	737
BlsI	GCNGC	6 cut(s)	178, 258, 356, 371, 565, 604
Bme1390I	CCNGG	4 cut(s)	288, 721, 906, 1141
Bme18I	GGWCC	1 cut(s)	908
BmeT110I	CYCGRG	1 cut(s)	263
BmgT120I	GGNCC	3 cut(s)	206, 741, 908
BmiI	GGNNCC	4 cut(s)	108, 279, 353, 955
BmrFI	CCNGG	4 cut(s)	288, 721, 906, 1141
BmsI	GCATC	6 cut(s)	51, 223, 229, 575, 589, 796
BplI	GAGNNNNNCTC	2 cut(s)	785, 817
BpmI	CTGGAG	1 cut(s)	135
Bpu10I	CCTNAGC	1 cut(s)	210
BsaHI	GRCGYC	1 cut(s)	352
BsaJI	CCNNGG	7 cut(s)	102, 286, 633, 737, 1005, 1140, 1213
BsaWI	WCCGGW	1 cut(s)	790
BsaXI	ACNNNNNCTCC	4 cut(s)	843, 873, 1156, 1186
Bsc4I	CCNNNNNNNGG	6 cut(s)	267, 268, 287, 790, 1029, 1085
Bse118I	RCCGGY	1 cut(s)	203
Bse1I	ACTGG	1 cut(s)	5
Bse3DI	GCAATG	1 cut(s)	279
BseAI	TCCGGA	1 cut(s)	790
BseBI	CCWGG	4 cut(s)	288, 721, 906, 1141
BseDI	CCNNGG	7 cut(s)	102, 286, 633, 737, 1005, 1140, 1213
BseGI	GGATG	8 cut(s)	42, 46, 50, 322, 787, 895, 1038, 1255
BseLI	CCNNNNNNNGG	6 cut(s)	267, 268, 287, 790, 1029, 1085
BseMI	GCAATG	1 cut(s)	279
BseMII	CTCAG	6 cut(s)	110, 129, 170, 224, 242, 1239
BseNI	ACTGG	1 cut(s)	5
BseRI	GAGGAG	1 cut(s)	864
BseSI	GKGCMC	1 cut(s)	1136
BseXI	GCAGC	4 cut(s)	163, 268, 550, 614
BseYI	CCCAGC	2 cut(s)	71, 783
Bsh1236I	CGCG	1 cut(s)	510
Bsh1285I	CGRYCG	1 cut(s)	334
BshFI	GGCC	5 cut(s)	203, 207, 369, 742, 1230
BshNI	GGYRCC	1 cut(s)	351
BsiEI	CGRYCG	1 cut(s)	334
BsiHKCI	CYCGRG	1 cut(s)	263
BsiSI	CCGG	2 cut(s)	204, 791
BslI	CCNNNNNNNGG	6 cut(s)	267, 268, 287, 790, 1029, 1085
BsmAI	GTCTC	1 cut(s)	1257
BsmI	GAATGC	3 cut(s)	127, 336, 1210
BsnI	GGCC	5 cut(s)	203, 207, 369, 742, 1230
BsoBI	CYCGRG	1 cut(s)	263
Bsp1286I	GDGCHC	2 cut(s)	170, 1136
Bsp13I	TCCGGA	1 cut(s)	790
Bsp1407I	TGTACA	1 cut(s)	961
Bsp143I	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
Bsp19I	CCATGG	1 cut(s)	1213
BspACI	CCGC	7 cut(s)	283, 334, 355, 370, 418, 556, 762
BspANI	GGCC	5 cut(s)	203, 207, 369, 742, 1230
BspCNI	CTCAG	6 cut(s)	109, 128, 169, 223, 241, 1238
BspEI	TCCGGA	1 cut(s)	790
BspFNI	CGCG	1 cut(s)	510
BspLI	GGNNCC	4 cut(s)	108, 279, 353, 955
BspMI	ACCTGC	1 cut(s)	651
BspPI	GGATC	7 cut(s)	272, 285, 484, 653, 846, 948, 961
BspQI	GCTCTTC	1 cut(s)	158
BspT107I	GGYRCC	1 cut(s)	351
BspTI	CTTAAG	1 cut(s)	586
BsrDI	GCAATG	1 cut(s)	279
BsrFI	RCCGGY	1 cut(s)	203
BsrGI	TGTACA	1 cut(s)	961
BsrI	ACTGG	1 cut(s)	5
BssAI	RCCGGY	1 cut(s)	203
BssECI	CCNNGG	7 cut(s)	102, 286, 633, 737, 1005, 1140, 1213
BssMI	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
BssNI	GRCGYC	1 cut(s)	352
BssT1I	CCWWGG	4 cut(s)	102, 737, 1005, 1213
Bst2UI	CCWGG	4 cut(s)	288, 721, 906, 1141
Bst4CI	ACNGT	2 cut(s)	488, 973
Bst6I	CTCTTC	1 cut(s)	158
BstACI	GRCGYC	1 cut(s)	352
BstAFI	CTTAAG	1 cut(s)	586
BstAPI	GCANNNNNTGC	1 cut(s)	553
BstAUI	TGTACA	1 cut(s)	961
BstC8I	GCNNGC	3 cut(s)	205, 422, 426
BstDEI	CTNAG	9 cut(s)	96, 115, 156, 210, 228, 804, 1057, 1157, 1225
BstDSI	CCRYGG	1 cut(s)	1213
BstF5I	GGATG	8 cut(s)	42, 46, 50, 322, 787, 895, 1038, 1255
BstFNI	CGCG	1 cut(s)	510
BstH2I	RGCGCY	1 cut(s)	355
BstHHI	GCGC	2 cut(s)	354, 484
BstKTI	GATC	6 cut(s)	280, 403, 479, 661, 841, 956
BstMAI	GTCTC	1 cut(s)	1257
BstMBI	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
BstMCI	CGRYCG	1 cut(s)	334
BstMWI	GCNNNNNNNGC	6 cut(s)	182, 553, 683, 761, 1010, 1131
BstNI	CCWGG	4 cut(s)	288, 721, 906, 1141
BstNSI	RCATGY	1 cut(s)	428
BstSCI	CCNGG	4 cut(s)	286, 719, 904, 1139
BstSFI	CTRYAG	1 cut(s)	969
BstSLI	GKGCMC	1 cut(s)	1136
BstUI	CGCG	1 cut(s)	510
BstV1I	GCAGC	4 cut(s)	163, 268, 550, 614
BstX2I	RGATCY	3 cut(s)	277, 476, 953
BstYI	RGATCY	3 cut(s)	277, 476, 953
BsuRI	GGCC	5 cut(s)	203, 207, 369, 742, 1230
BtgI	CCRYGG	1 cut(s)	1213
BtsCI	GGATG	8 cut(s)	42, 46, 50, 322, 787, 895, 1038, 1255
BtsI	GCAGTG	1 cut(s)	1164
BtsIMutI	CAGTG	2 cut(s)	123, 1164
BveI	ACCTGC	1 cut(s)	651
Cac8I	GCNNGC	3 cut(s)	205, 422, 426
CaiI	CAGNNNCTG	2 cut(s)	223, 905
CfoI	GCGC	2 cut(s)	354, 484
Cfr10I	RCCGGY	1 cut(s)	203
Cfr13I	GGNCC	3 cut(s)	206, 741, 908
CsiI	ACCWGGT	2 cut(s)	719, 904
Csp6I	GTAC	3 cut(s)	61, 489, 962
CviAII	CATG	3 cut(s)	58, 425, 1214
CviQI	GTAC	3 cut(s)	61, 489, 962
DdeI	CTNAG	9 cut(s)	96, 115, 156, 210, 228, 804, 1057, 1157, 1225
DinI	GGCGCC	1 cut(s)	353
DpnI	GATC	6 cut(s)	279, 402, 478, 660, 840, 955
DpnII	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
EaeI	YGGCCR	1 cut(s)	367
Eam1104I	CTCTTC	1 cut(s)	158
EarI	CTCTTC	1 cut(s)	158
Eco130I	CCWWGG	4 cut(s)	102, 737, 1005, 1213
Eco24I	GRGCYC	1 cut(s)	170
Eco47I	GGWCC	1 cut(s)	908
Eco88I	CYCGRG	1 cut(s)	263
EcoRII	CCWGG	4 cut(s)	286, 719, 904, 1139
EcoT14I	CCWWGG	4 cut(s)	102, 737, 1005, 1213
EcoT38I	GRGCYC	1 cut(s)	170
EgeI	GGCGCC	1 cut(s)	353
EheI	GGCGCC	1 cut(s)	353
ErhI	CCWWGG	4 cut(s)	102, 737, 1005, 1213
FaeI	CATG	3 cut(s)	61, 428, 1217
FatI	CATG	3 cut(s)	57, 424, 1213
FauI	CCCGC	2 cut(s)	290, 425
FbaI	TGATCA	1 cut(s)	400
Fnu4HI	GCNGC	6 cut(s)	177, 257, 355, 370, 564, 603
FokI	GGATG	8 cut(s)	29, 33, 37, 329, 774, 902, 1045, 1262
FriOI	GRGCYC	1 cut(s)	170
FseI	GGCCGGCC	1 cut(s)	207
Fsp4HI	GCNGC	6 cut(s)	177, 257, 355, 370, 564, 603
FspBI	CTAG	3 cut(s)	573, 726, 738
FspI	TGCGCA	1 cut(s)	483
GlaI	GCGC	2 cut(s)	353, 483
GluI	GCNGC	6 cut(s)	177, 257, 355, 370, 564, 603
GsaI	CCCAGC	2 cut(s)	75, 787
GsuI	CTGGAG	1 cut(s)	135
HaeII	RGCGCY	1 cut(s)	355
HaeIII	GGCC	5 cut(s)	203, 207, 369, 742, 1230
HapII	CCGG	2 cut(s)	204, 791
HhaI	GCGC	2 cut(s)	354, 484
Hin1I	GRCGYC	1 cut(s)	352
Hin1II	CATG	3 cut(s)	61, 428, 1217
Hin6I	GCGC	2 cut(s)	352, 482
HinP1I	GCGC	2 cut(s)	352, 482
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HinfI	GANTC	6 cut(s)	12, 226, 749, 1065, 1112, 1184
HpaII	CCGG	2 cut(s)	204, 791
HphI	GGTGA	2 cut(s)	248, 788
Hpy166II	GTNNAC	1 cut(s)	640
Hpy188III	TCNNGA	5 cut(s)	197, 310, 329, 344, 791
Hpy8I	GTNNAC	1 cut(s)	640
Hpy99I	CGWCG	1 cut(s)	686
HpyAV	CCTTC	9 cut(s)	15, 19, 121, 307, 639, 811, 920, 982, 1161
HpyCH4III	ACNGT	2 cut(s)	488, 973
HpyCH4V	TGCA	5 cut(s)	42, 500, 566, 602, 1208
HpyF10VI	GCNNNNNNNGC	6 cut(s)	182, 553, 683, 761, 1010, 1131
HpyF3I	CTNAG	9 cut(s)	96, 115, 156, 210, 228, 804, 1057, 1157, 1225
Hsp92I	GRCGYC	1 cut(s)	352
Hsp92II	CATG	3 cut(s)	61, 428, 1217
HspAI	GCGC	2 cut(s)	352, 482
KasI	GGCGCC	1 cut(s)	351
Kpn2I	TCCGGA	1 cut(s)	790
KroI	GCCGGC	1 cut(s)	203
KroNI	GCCGGC	1 cut(s)	205
Ksp22I	TGATCA	1 cut(s)	400
Kzo9I	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
LguI	GCTCTTC	1 cut(s)	158
LmnI	GCTCC	2 cut(s)	991, 1081
Lsp1109I	GCAGC	4 cut(s)	163, 268, 550, 614
LweI	GCATC	6 cut(s)	51, 223, 229, 575, 589, 796
MabI	ACCWGGT	2 cut(s)	719, 904
MaeI	CTAG	3 cut(s)	573, 726, 738
MaeIII	GTNAC	2 cut(s)	511, 776
MalI	GATC	6 cut(s)	279, 402, 478, 660, 840, 955
MboI	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
MboII	GAAGA	6 cut(s)	7, 46, 172, 175, 293, 683
MflI	RGATCY	3 cut(s)	277, 476, 953
MhlI	GDGCHC	2 cut(s)	170, 1136
MluCI	AATT	6 cut(s)	37, 465, 810, 975, 1018, 1043
MluI	ACGCGT	1 cut(s)	508
Mly113I	GGCGCC	1 cut(s)	352
MlyI	GAGTC	4 cut(s)	220, 758, 1074, 1178
MmeI	TCCRAC	2 cut(s)	826, 922
MroI	TCCGGA	1 cut(s)	790
MroNI	GCCGGC	1 cut(s)	203
MseI	TTAA	2 cut(s)	587, 813
MslI	CAYNNNNRTG	2 cut(s)	384, 447
MspCI	CTTAAG	1 cut(s)	586
MspI	CCGG	2 cut(s)	204, 791
MspR9I	CCNGG	4 cut(s)	288, 721, 906, 1141
Mva1269I	GAATGC	3 cut(s)	127, 336, 1210
MvaI	CCWGG	4 cut(s)	288, 721, 906, 1141
MvnI	CGCG	1 cut(s)	510
MwoI	GCNNNNNNNGC	6 cut(s)	182, 553, 683, 761, 1010, 1131
NaeI	GCCGGC	1 cut(s)	205
NarI	GGCGCC	1 cut(s)	352
NcoI	CCATGG	1 cut(s)	1213
NdeII	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
NgoMIV	GCCGGC	1 cut(s)	203
NlaIII	CATG	3 cut(s)	61, 428, 1217
NlaIV	GGNNCC	4 cut(s)	108, 279, 353, 955
NmuCI	GTSAC	2 cut(s)	511, 776
NsbI	TGCGCA	1 cut(s)	483
NspI	RCATGY	1 cut(s)	428
PaeI	GCATGC	1 cut(s)	428
PciSI	GCTCTTC	1 cut(s)	158
PctI	GAATGC	3 cut(s)	127, 336, 1210
PdiI	GCCGGC	1 cut(s)	205
PfeI	GAWTC	2 cut(s)	12, 1112
PflFI	GACNNNGTC	1 cut(s)	721
PflMI	CCANNNNNTGG	1 cut(s)	1085
PkrI	GCNGC	6 cut(s)	178, 258, 356, 371, 565, 604
PleI	GAGTC	4 cut(s)	220, 757, 1073, 1178
PluTI	GGCGCC	1 cut(s)	355
PpsI	GAGTC	4 cut(s)	220, 757, 1073, 1178
PsiI	TTATAA	1 cut(s)	690
Psp6I	CCWGG	4 cut(s)	286, 719, 904, 1139
PspFI	CCCAGC	2 cut(s)	71, 783
PspGI	CCWGG	4 cut(s)	286, 719, 904, 1139
PspN4I	GGNNCC	4 cut(s)	108, 279, 353, 955
PspPI	GGNCC	3 cut(s)	206, 741, 908
PstNI	CAGNNNCTG	2 cut(s)	223, 905
PsuI	RGATCY	3 cut(s)	277, 476, 953
PsyI	GACNNNGTC	1 cut(s)	721
RigI	GGCCGGCC	1 cut(s)	207
RsaI	GTAC	3 cut(s)	62, 490, 963
RsaNI	GTAC	3 cut(s)	61, 489, 962
RseI	CAYNNNNRTG	2 cut(s)	384, 447
SapI	GCTCTTC	1 cut(s)	158
SaqAI	TTAA	2 cut(s)	587, 813
SatI	GCNGC	6 cut(s)	177, 257, 355, 370, 564, 603
Sau3AI	GATC	6 cut(s)	277, 400, 476, 658, 838, 953
Sau96I	GGNCC	3 cut(s)	206, 741, 908
SchI	GAGTC	4 cut(s)	220, 758, 1074, 1178
ScrFI	CCNGG	4 cut(s)	288, 721, 906, 1141
SduI	GDGCHC	2 cut(s)	170, 1136
SexAI	ACCWGGT	2 cut(s)	719, 904
SfaNI	GCATC	6 cut(s)	51, 223, 229, 575, 589, 796
SfcI	CTRYAG	1 cut(s)	969
SfoI	GGCGCC	1 cut(s)	353
SinI	GGWCC	1 cut(s)	908
SmiMI	CAYNNNNRTG	2 cut(s)	384, 447
SmlI	CTYRAG	1 cut(s)	586
SmoI	CTYRAG	1 cut(s)	586
SphI	GCATGC	1 cut(s)	428
Sse9I	AATT	6 cut(s)	37, 465, 810, 975, 1018, 1043
SsiI	CCGC	7 cut(s)	283, 334, 355, 370, 418, 556, 762
SspDI	GGCGCC	1 cut(s)	351
SspMI	CTAG	3 cut(s)	573, 726, 738
StyD4I	CCNGG	4 cut(s)	286, 719, 904, 1139
StyI	CCWWGG	4 cut(s)	102, 737, 1005, 1213
TaaI	ACNGT	2 cut(s)	488, 973
TaqI	TCGA	3 cut(s)	248, 330, 1202
TasI	AATT	6 cut(s)	37, 465, 810, 975, 1018, 1043
TatI	WGTACW	1 cut(s)	961
TauI	GCSGC	2 cut(s)	357, 372
TfiI	GAWTC	2 cut(s)	12, 1112
Tru1I	TTAA	2 cut(s)	587, 813
Tru9I	TTAA	2 cut(s)	587, 813
TscAI	CASTG	2 cut(s)	123, 1171
TseFI	GTSAC	2 cut(s)	511, 776
TseI	GCWGC	4 cut(s)	176, 256, 563, 602
Tsp45I	GTSAC	2 cut(s)	511, 776
TspDTI	ATGAA	2 cut(s)	684, 1206
TspRI	CASTG	2 cut(s)	123, 1171
Tth111I	GACNNNGTC	1 cut(s)	721
Van91I	CCANNNNNTGG	1 cut(s)	1085
Vha464I	CTTAAG	1 cut(s)	586
VpaK11BI	GGWCC	1 cut(s)	908
XceI	RCATGY	1 cut(s)	428
XmaJI	CCTAGG	1 cut(s)	737
XspI	CTAG	3 cut(s)	573, 726, 738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.