Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0012083

Physical Location & Seq

Genomic Coordinates Forward (+)

221061 .. 223382

Gene Structure 2322 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030856

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGTACGGCAGAGCTGGGCTTGATAGATTTAGGAAAGCTCAGTCCTTGGAACCCTTCTCAGTGAATGCCAATGCCAAATCCTCCACTCCAGCTCAGAAGCCTGCTGCTGCTCCTGTTCCTGTTGTTCAGGAGGCCGGCCCTCAGCATCTGACTCAGATTGGTGAGGGTCAGTCGAGTTGGCAGCCCCCCGAGTGGGCAATGGATCCCCGCCCTGGTGTTTATTTTCTTCAAGTCTTGAAGGATGGTCAACTTGTCGACCGCATTCCTCTTGATAGGCGCCGCAACATCTTTGGCCGCCAATCTCATACTTGTGATTTTGTGCTTGATCATCAGTCTGTTTCCCGCCAGCATGCTGTTGTTGTTCCTCACAAGAATGGAAGCATTTATGTAATTGATTTGGGATCTGCGCACGGTACTTTTGTTGCAAACGAACGGGTGACTAAAGATACCCCTGTTGAGCTTGAAGTTGGGCAGTCTTTGCGGTTTGCTGCATCAACTAGAACTTATGTCTTAAGAAAGAACGATGCAGCTCTTTTTCCTCGTCCTCCAATGCCTTCCGAGGTTGACCTGCCACCACCACCTGATCCATCTGATGAAGAAGCTGTTGTCGCTTATAATACGCTTCTAAATCGTTATGGTCTGACCAGGTCTAGCAAACTGCCTAGGCCCAATGAGTCAGCTAACTCCGCCGCAAACAAAAAAGGTGACACCCGGCATCCGGAGAGAGCCTCTAAGAGAATTAAGAAGGCAAGAGTATCATTCAGGGATCAAGTTGGAGGAGAGTTGATTGAAGTTGTTGGTATATCAGATGGTGTGGATGTAGGAACAGAACCTGGTCCTATAGGTGTAAAAGAAGGGCAAAGTCTTGTTGGAAAATATGGATCCCTTGTACAGACTACAGTAATTCCCAAAGGGAAGGAGCAATCATCTGCCAAGGAAGCGAATAATTCCCAGAAGGGGATGACTGAAAAATTACAACAAGTCTTAGATAGGGTCAAAACTGCTCCAAAAGGTGGGATATATGATGACCTTTATGGAGAATCTTATTCGGGCAAAGTGGGCACTTCCTGGGCATATCCTTCACTTAGTTCCACTGCCTCTCCAAGTAAAGACTCTGATGAAAAGCCATCGAATGCAAACCATGGAACTAACTCGGGCCAAGTTGATGATGACGAGGATGATTTATTTGGAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0008150 GO:0009892 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016604 GO:0016607 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032515 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0080090 GO:0097159 GO:0098772 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA

Protein Analysis

399

Amino Acids

43.17

Weight (kDa)

6.73

Isoelectric Point (pI)

43.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	88 - 159	1.6e-06	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	96 - 162	4.8e-19	FHA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47790
fragaria_vesca	FvH4_3g00210
malus_domestica	MD05G1362800.v1.1 MD10G1340400.v1.1
prunus_persica	Prupe.4G002500_v2.0.a1 Prupe.4G002500_v2.0.a1 Prupe.4G002500_v2.0.a1
pyrus_communis	pycom05g32930 pycom10g29020
rosa_chinensis	RchiOBHm_Chr5g0000281
rosa_laevigata	RLG00000030856
rosa_multiflora	Rmu_ssc0000385.1_g000005
rosa_roxburghii	Rroxscaffold_1G00075830
rosa_rugosa	Rorug04G0383000
rosa_samantha	Rh5AG002100 Rh5BG003500 Rh5CG002400 Rh5DG002400
rosa_wichuraiana	Rw5G000260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	615
Acc16I	TGCGCA	1 cut(s)	408
Acc36I	ACCTGC	1 cut(s)	576
AccB1I	GGYRCC	1 cut(s)	276
AccB7I	CCANNNNNTGG	1 cut(s)	1013
AccI	GTMKAC	1 cut(s)	255
AccIII	TCCGGA	1 cut(s)	718
AciI	CCGC	8 cut(s)	208, 259, 280, 295, 343, 481, 687, 690
AclWI	GGATC	7 cut(s)	197, 210, 409, 578, 774, 876, 889
AcoI	YGGCCR	1 cut(s)	292
AcyI	GRCGYC	1 cut(s)	277
AfaI	GTAC	3 cut(s)	5, 415, 891
AfiI	CCNNNNNNNGG	6 cut(s)	192, 193, 212, 718, 957, 1013
AflII	CTTAAG	1 cut(s)	511
AgsI	TTSAA	4 cut(s)	230, 238, 464, 791
AjnI	CCWGG	4 cut(s)	211, 644, 832, 1067
AluBI	AGCT	7 cut(s)	14, 38, 92, 460, 530, 602, 680
AluI	AGCT	7 cut(s)	14, 38, 92, 460, 530, 602, 680
Alw26I	GTCTC	1 cut(s)	1185
AlwI	GGATC	7 cut(s)	197, 210, 409, 578, 774, 876, 889
AlwNI	CAGNNNCTG	2 cut(s)	148, 833
Ama87I	CYCGRG	2 cut(s)	188, 1153
Aor13HI	TCCGGA	1 cut(s)	718
AoxI	GGCC	5 cut(s)	132, 136, 292, 665, 1156
ApeKI	GCWGC	5 cut(s)	104, 107, 181, 488, 527
AspA2I	CCTAGG	1 cut(s)	662
AspLEI	GCGC	2 cut(s)	279, 409
AspS9I	GGNCC	4 cut(s)	137, 666, 836, 1156
AsuC2I	CCSGG	1 cut(s)	712
AsuHPI	GGTGA	3 cut(s)	173, 448, 716
AvaI	CYCGRG	2 cut(s)	188, 1153
AvaII	GGWCC	1 cut(s)	836
AvrII	CCTAGG	1 cut(s)	662
BaeGI	GKGCMC	1 cut(s)	1064
BaeI	ACNNNNGTAYC	4 cut(s)	405, 438, 438, 471
BamHI	GGATCC	2 cut(s)	202, 881
BanI	GGYRCC	1 cut(s)	276
BbvCI	CCTCAGC	1 cut(s)	141
BbvI	GCAGC	5 cut(s)	91, 94, 193, 475, 539
BccI	CCATC	4 cut(s)	236, 595, 803, 1135
BceAI	ACGGC	1 cut(s)	22
BciT130I	CCWGG	4 cut(s)	213, 646, 834, 1069
BclI	TGATCA	1 cut(s)	325
BcnI	CCSGG	1 cut(s)	712
BcoDI	GTCTC	1 cut(s)	1185
BfaI	CTAG	3 cut(s)	498, 651, 663
BfmI	CTRYAG	2 cut(s)	840, 897
BfoI	RGCGCY	1 cut(s)	280
BfrI	CTTAAG	1 cut(s)	511
BfuAI	ACCTGC	1 cut(s)	576
BisI	GCNGC	8 cut(s)	105, 108, 182, 280, 295, 489, 528, 690
BlnI	CCTAGG	1 cut(s)	662
BlsI	GCNGC	8 cut(s)	106, 109, 183, 281, 296, 490, 529, 691
Bme1390I	CCNGG	5 cut(s)	213, 646, 712, 834, 1069
Bme18I	GGWCC	1 cut(s)	836
BmeT110I	CYCGRG	2 cut(s)	188, 1153
BmgT120I	GGNCC	4 cut(s)	137, 666, 836, 1156
BmiI	GGNNCC	4 cut(s)	51, 204, 278, 883
BmrFI	CCNGG	5 cut(s)	213, 646, 712, 834, 1069
BmsI	GCATC	4 cut(s)	154, 500, 514, 724
BplI	GAGNNNNNCTC	2 cut(s)	713, 745
BpmI	CTGGAG	1 cut(s)	72
Bpu10I	CCTNAGC	1 cut(s)	141
BpuMI	CCSGG	1 cut(s)	712
BsaHI	GRCGYC	1 cut(s)	277
BsaJI	CCNNGG	7 cut(s)	45, 211, 558, 662, 933, 1068, 1141
BsaWI	WCCGGW	1 cut(s)	718
BsaXI	ACNNNNNCTCC	2 cut(s)	1084, 1114
Bsc4I	CCNNNNNNNGG	6 cut(s)	192, 193, 212, 718, 957, 1013
Bse118I	RCCGGY	1 cut(s)	134
Bse3DI	GCAATG	1 cut(s)	204
BseAI	TCCGGA	1 cut(s)	718
BseBI	CCWGG	4 cut(s)	213, 646, 834, 1069
BseDI	CCNNGG	7 cut(s)	45, 211, 558, 662, 933, 1068, 1141
BseGI	GGATG	5 cut(s)	247, 715, 823, 966, 1183
BseLI	CCNNNNNNNGG	6 cut(s)	192, 193, 212, 718, 957, 1013
BseMI	GCAATG	1 cut(s)	204
BseMII	CTCAG	5 cut(s)	53, 72, 107, 155, 167
BseRI	GAGGAG	1 cut(s)	792
BseSI	GKGCMC	1 cut(s)	1064
BseXI	GCAGC	5 cut(s)	91, 94, 193, 475, 539
BseYI	CCCAGC	1 cut(s)	14
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	5 cut(s)	134, 138, 294, 667, 1158
BshNI	GGYRCC	1 cut(s)	276
BsiEI	CGRYCG	1 cut(s)	259
BsiHKCI	CYCGRG	2 cut(s)	188, 1153
BsiSI	CCGG	3 cut(s)	135, 712, 719
BslI	CCNNNNNNNGG	6 cut(s)	192, 193, 212, 718, 957, 1013
BsmAI	GTCTC	1 cut(s)	1185
BsmI	GAATGC	3 cut(s)	70, 261, 1138
BsnI	GGCC	5 cut(s)	134, 138, 294, 667, 1158
BsoBI	CYCGRG	2 cut(s)	188, 1153
Bsp1286I	GDGCHC	1 cut(s)	1064
Bsp13I	TCCGGA	1 cut(s)	718
Bsp1407I	TGTACA	1 cut(s)	889
Bsp143I	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
Bsp19I	CCATGG	1 cut(s)	1141
BspACI	CCGC	8 cut(s)	208, 259, 280, 295, 343, 481, 687, 690
BspANI	GGCC	5 cut(s)	134, 138, 294, 667, 1158
BspCNI	CTCAG	5 cut(s)	52, 71, 106, 154, 166
BspEI	TCCGGA	1 cut(s)	718
BspLI	GGNNCC	4 cut(s)	51, 204, 278, 883
BspMI	ACCTGC	1 cut(s)	576
BspPI	GGATC	7 cut(s)	197, 210, 409, 578, 774, 876, 889
BspT107I	GGYRCC	1 cut(s)	276
BspTI	CTTAAG	1 cut(s)	511
BsrDI	GCAATG	1 cut(s)	204
BsrFI	RCCGGY	1 cut(s)	134
BsrGI	TGTACA	1 cut(s)	889
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	7 cut(s)	45, 211, 558, 662, 933, 1068, 1141
BssMI	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
BssNI	GRCGYC	1 cut(s)	277
BssT1I	CCWWGG	4 cut(s)	45, 662, 933, 1141
Bst2UI	CCWGG	4 cut(s)	213, 646, 834, 1069
Bst4CI	ACNGT	2 cut(s)	413, 901
BstACI	GRCGYC	1 cut(s)	277
BstAFI	CTTAAG	1 cut(s)	511
BstAPI	GCANNNNNTGC	1 cut(s)	478
BstAUI	TGTACA	1 cut(s)	889
BstC8I	GCNNGC	4 cut(s)	102, 136, 347, 351
BstDEI	CTNAG	8 cut(s)	39, 58, 93, 141, 153, 732, 985, 1085
BstDSI	CCRYGG	1 cut(s)	1141
BstF5I	GGATG	5 cut(s)	247, 715, 823, 966, 1183
BstH2I	RGCGCY	1 cut(s)	280
BstHHI	GCGC	2 cut(s)	279, 409
BstKTI	GATC	6 cut(s)	205, 328, 404, 586, 769, 884
BstMAI	GTCTC	1 cut(s)	1185
BstMBI	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	5 cut(s)	478, 608, 686, 938, 1059
BstNI	CCWGG	4 cut(s)	213, 646, 834, 1069
BstNSI	RCATGY	1 cut(s)	353
BstSCI	CCNGG	5 cut(s)	211, 644, 710, 832, 1067
BstSFI	CTRYAG	2 cut(s)	840, 897
BstSLI	GKGCMC	1 cut(s)	1064
BstV1I	GCAGC	5 cut(s)	91, 94, 193, 475, 539
BstX2I	RGATCY	3 cut(s)	202, 401, 881
BstYI	RGATCY	3 cut(s)	202, 401, 881
BsuRI	GGCC	5 cut(s)	134, 138, 294, 667, 1158
BtgI	CCRYGG	1 cut(s)	1141
BtsCI	GGATG	5 cut(s)	247, 715, 823, 966, 1183
BtsI	GCAGTG	1 cut(s)	1092
BtsIMutI	CAGTG	2 cut(s)	66, 1092
BveI	ACCTGC	1 cut(s)	576
Cac8I	GCNNGC	4 cut(s)	102, 136, 347, 351
CaiI	CAGNNNCTG	2 cut(s)	148, 833
CfoI	GCGC	2 cut(s)	279, 409
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	4 cut(s)	137, 666, 836, 1156
CsiI	ACCWGGT	2 cut(s)	644, 832
Csp6I	GTAC	3 cut(s)	4, 414, 890
CviAII	CATG	2 cut(s)	350, 1142
CviQI	GTAC	3 cut(s)	4, 414, 890
DdeI	CTNAG	8 cut(s)	39, 58, 93, 141, 153, 732, 985, 1085
DinI	GGCGCC	1 cut(s)	278
DpnI	GATC	6 cut(s)	204, 327, 403, 585, 768, 883
DpnII	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
EaeI	YGGCCR	1 cut(s)	292
EciI	GGCGGA	1 cut(s)	676
Eco130I	CCWWGG	4 cut(s)	45, 662, 933, 1141
Eco47I	GGWCC	1 cut(s)	836
Eco88I	CYCGRG	2 cut(s)	188, 1153
EcoRII	CCWGG	4 cut(s)	211, 644, 832, 1067
EcoT14I	CCWWGG	4 cut(s)	45, 662, 933, 1141
EgeI	GGCGCC	1 cut(s)	278
EheI	GGCGCC	1 cut(s)	278
ErhI	CCWWGG	4 cut(s)	45, 662, 933, 1141
FaeI	CATG	2 cut(s)	353, 1145
FatI	CATG	2 cut(s)	349, 1141
FauI	CCCGC	2 cut(s)	215, 350
FbaI	TGATCA	1 cut(s)	325
FblI	GTMKAC	1 cut(s)	255
Fnu4HI	GCNGC	8 cut(s)	105, 108, 182, 280, 295, 489, 528, 690
FokI	GGATG	5 cut(s)	254, 702, 830, 973, 1190
FseI	GGCCGGCC	1 cut(s)	138
Fsp4HI	GCNGC	8 cut(s)	105, 108, 182, 280, 295, 489, 528, 690
FspBI	CTAG	3 cut(s)	498, 651, 663
FspI	TGCGCA	1 cut(s)	408
GlaI	GCGC	2 cut(s)	278, 408
GluI	GCNGC	8 cut(s)	105, 108, 182, 280, 295, 489, 528, 690
GsaI	CCCAGC	1 cut(s)	18
GsuI	CTGGAG	1 cut(s)	72
HaeII	RGCGCY	1 cut(s)	280
HaeIII	GGCC	5 cut(s)	134, 138, 294, 667, 1158
HapII	CCGG	3 cut(s)	135, 712, 719
HhaI	GCGC	2 cut(s)	279, 409
Hin1I	GRCGYC	1 cut(s)	277
Hin1II	CATG	2 cut(s)	353, 1145
Hin6I	GCGC	2 cut(s)	277, 407
HinP1I	GCGC	2 cut(s)	277, 407
HincII	GTYRAC	3 cut(s)	248, 256, 565
HindII	GTYRAC	3 cut(s)	248, 256, 565
HinfI	GANTC	4 cut(s)	151, 674, 1040, 1112
HpaII	CCGG	3 cut(s)	135, 712, 719
HphI	GGTGA	3 cut(s)	173, 448, 716
Hpy166II	GTNNAC	3 cut(s)	248, 256, 565
Hpy188I	TCNGA	8 cut(s)	96, 150, 156, 559, 592, 642, 808, 1117
Hpy188III	TCNNGA	4 cut(s)	128, 235, 269, 719
Hpy8I	GTNNAC	3 cut(s)	248, 256, 565
HpyAV	CCTTC	8 cut(s)	64, 232, 564, 739, 848, 910, 949, 1089
HpyCH4III	ACNGT	2 cut(s)	413, 901
HpyCH4V	TGCA	4 cut(s)	425, 491, 527, 1136
HpyF10VI	GCNNNNNNNGC	5 cut(s)	478, 608, 686, 938, 1059
HpyF3I	CTNAG	8 cut(s)	39, 58, 93, 141, 153, 732, 985, 1085
Hsp92I	GRCGYC	1 cut(s)	277
Hsp92II	CATG	2 cut(s)	353, 1145
HspAI	GCGC	2 cut(s)	277, 407
KasI	GGCGCC	1 cut(s)	276
Kpn2I	TCCGGA	1 cut(s)	718
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
Ksp22I	TGATCA	1 cut(s)	325
Kzo9I	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
LmnI	GCTCC	3 cut(s)	115, 919, 1009
Lsp1109I	GCAGC	5 cut(s)	91, 94, 193, 475, 539
LweI	GCATC	4 cut(s)	154, 500, 514, 724
MabI	ACCWGGT	2 cut(s)	644, 832
MaeI	CTAG	3 cut(s)	498, 651, 663
MaeIII	GTNAC	2 cut(s)	436, 704
MalI	GATC	6 cut(s)	204, 327, 403, 585, 768, 883
MboI	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
MboII	GAAGA	2 cut(s)	218, 608
MflI	RGATCY	3 cut(s)	202, 401, 881
MhlI	GDGCHC	1 cut(s)	1064
MluCI	AATT	5 cut(s)	390, 738, 903, 946, 971
Mly113I	GGCGCC	1 cut(s)	277
MlyI	GAGTC	3 cut(s)	145, 683, 1106
MmeI	TCCRAC	2 cut(s)	754, 850
MroI	TCCGGA	1 cut(s)	718
MroNI	GCCGGC	1 cut(s)	134
MseI	TTAA	2 cut(s)	512, 741
MslI	CAYNNNNRTG	2 cut(s)	309, 372
MspCI	CTTAAG	1 cut(s)	511
MspI	CCGG	3 cut(s)	135, 712, 719
MspR9I	CCNGG	5 cut(s)	213, 646, 712, 834, 1069
Mva1269I	GAATGC	3 cut(s)	70, 261, 1138
MvaI	CCWGG	4 cut(s)	213, 646, 834, 1069
MwoI	GCNNNNNNNGC	5 cut(s)	478, 608, 686, 938, 1059
NaeI	GCCGGC	1 cut(s)	136
NarI	GGCGCC	1 cut(s)	277
NciI	CCSGG	1 cut(s)	712
NcoI	CCATGG	1 cut(s)	1141
NdeII	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	2 cut(s)	353, 1145
NlaIV	GGNNCC	4 cut(s)	51, 204, 278, 883
NmuCI	GTSAC	2 cut(s)	436, 704
NsbI	TGCGCA	1 cut(s)	408
NspI	RCATGY	1 cut(s)	353
PaeI	GCATGC	1 cut(s)	353
PctI	GAATGC	3 cut(s)	70, 261, 1138
PdiI	GCCGGC	1 cut(s)	136
PfeI	GAWTC	1 cut(s)	1040
PflFI	GACNNNGTC	1 cut(s)	646
PflMI	CCANNNNNTGG	1 cut(s)	1013
PkrI	GCNGC	8 cut(s)	106, 109, 183, 281, 296, 490, 529, 691
PleI	GAGTC	3 cut(s)	145, 682, 1106
PluTI	GGCGCC	1 cut(s)	280
PpsI	GAGTC	3 cut(s)	145, 682, 1106
PsiI	TTATAA	1 cut(s)	615
Psp6I	CCWGG	4 cut(s)	211, 644, 832, 1067
PspFI	CCCAGC	1 cut(s)	14
PspGI	CCWGG	4 cut(s)	211, 644, 832, 1067
PspN4I	GGNNCC	4 cut(s)	51, 204, 278, 883
PspPI	GGNCC	4 cut(s)	137, 666, 836, 1156
PstNI	CAGNNNCTG	2 cut(s)	148, 833
PsuI	RGATCY	3 cut(s)	202, 401, 881
PsyI	GACNNNGTC	1 cut(s)	646
RigI	GGCCGGCC	1 cut(s)	138
RsaI	GTAC	3 cut(s)	5, 415, 891
RsaNI	GTAC	3 cut(s)	4, 414, 890
RseI	CAYNNNNRTG	2 cut(s)	309, 372
SalI	GTCGAC	1 cut(s)	254
SaqAI	TTAA	2 cut(s)	512, 741
SatI	GCNGC	8 cut(s)	105, 108, 182, 280, 295, 489, 528, 690
Sau3AI	GATC	6 cut(s)	202, 325, 401, 583, 766, 881
Sau96I	GGNCC	4 cut(s)	137, 666, 836, 1156
SchI	GAGTC	3 cut(s)	145, 683, 1106
ScrFI	CCNGG	5 cut(s)	213, 646, 712, 834, 1069
SduI	GDGCHC	1 cut(s)	1064
SexAI	ACCWGGT	2 cut(s)	644, 832
SfaNI	GCATC	4 cut(s)	154, 500, 514, 724
SfcI	CTRYAG	2 cut(s)	840, 897
SfoI	GGCGCC	1 cut(s)	278
SinI	GGWCC	1 cut(s)	836
SmiMI	CAYNNNNRTG	2 cut(s)	309, 372
SmlI	CTYRAG	1 cut(s)	511
SmoI	CTYRAG	1 cut(s)	511
SphI	GCATGC	1 cut(s)	353
Sse9I	AATT	5 cut(s)	390, 738, 903, 946, 971
SsiI	CCGC	8 cut(s)	208, 259, 280, 295, 343, 481, 687, 690
SspDI	GGCGCC	1 cut(s)	276
SspMI	CTAG	3 cut(s)	498, 651, 663
StyD4I	CCNGG	5 cut(s)	211, 644, 710, 832, 1067
StyI	CCWWGG	4 cut(s)	45, 662, 933, 1141
TaaI	ACNGT	2 cut(s)	413, 901
TaqI	TCGA	3 cut(s)	173, 255, 1130
TasI	AATT	5 cut(s)	390, 738, 903, 946, 971
TatI	WGTACW	1 cut(s)	889
TauI	GCSGC	3 cut(s)	282, 297, 692
TfiI	GAWTC	1 cut(s)	1040
Tru1I	TTAA	2 cut(s)	512, 741
Tru9I	TTAA	2 cut(s)	512, 741
TscAI	CASTG	2 cut(s)	66, 1099
TseFI	GTSAC	2 cut(s)	436, 704
TseI	GCWGC	5 cut(s)	104, 107, 181, 488, 527
Tsp45I	GTSAC	2 cut(s)	436, 704
TspDTI	ATGAA	2 cut(s)	609, 1134
TspRI	CASTG	2 cut(s)	66, 1099
Tth111I	GACNNNGTC	1 cut(s)	646
Van91I	CCANNNNNTGG	1 cut(s)	1013
Vha464I	CTTAAG	1 cut(s)	511
VpaK11BI	GGWCC	1 cut(s)	836
XceI	RCATGY	1 cut(s)	353
XmaJI	CCTAGG	1 cut(s)	662
XmiI	GTMKAC	1 cut(s)	255
XspI	CTAG	3 cut(s)	498, 651, 663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.