Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0007854

Physical Location & Seq

Genomic Coordinates Reverse (-)

13987914 .. 13994392

Gene Structure 6479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g08790.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGAGCGGAACAACGCTAACACCGCAGGCGGTGAGCAACTTAATCAGTCTGAACGTTGGAGGCATTGGGCGGCAGCAACTCTCCGCTTCCCTCGTTAACTCCTACCGAGTCGCCGCCGTCGCCGAGCGCTTGGCGGCTCACGTCAAATCTGGCTATCGCGGCGAGGCCATGGAGTTCTTCAATCTCTGCCTTTCCCTTTCCAGAGGCATTGACTATGCCGTTGCAAACAATGAGGTTCCGGCGATTGCTCAAGATTTACCTGGGTTGTTGAAGCAGATATGCCAACGCAAGAGTGATAAGGTTTTGGAAGCTGCTATCATGGTGCTGATGATTTCTGTTAAGAATGCTTGTAGGGCAGGATGGTTTTCGGATAAGGAGACTGAAGAACTTTTTTCTCTAGCTAATGAGATAGGAAGTAGCTTCTGCAGCTTGGGGGATGTTAAAACTGGAGCTAGCTGTTCTCTTTCTGTAATAGACACAATTATGGAAAGGTATTATCCAATGATGAAGATGGGCCAAATACTTGCCTCTCTCGAAGTCAAGCCGGGATATGGGGCACATGTGCTTGATTTCCATATTTCGAAGACTACAGAATATTCTCCGCAAGAAAAAATTCGATTATTTGTAGCACAAACAGATAATTTAGAGACATCTGCTTGTATTATAAGTCCGCCACAAGTGAACTTTCTGCTAAATGGAAAGGGAGTAGATAGAAGGATCAACGTTACAATGGATACTGGACCCCAGGTGCCTTCAGTAGTGACTGGAATGCTTAAGTTTGGATCAAATCTTCTGCAAGCTGTGGGTCAGTTCAATGGTAACTATATCATAGTGGTTGCCTTTATGAGCCTCACGCCATCACCTGACACTCCAGCACTGAAAGATTATACTCAGCCCACTGTCTCTCCTTCAGATTCAGATCCTGATATAATAGAGGGGCCATCAAGGATTTCTCTCAATTGTCCCATAAGTTATACACGTATAAAAACTCCTGTCAAAGGACATTTTTGCAAACATCTTCAGTGTTTCGACTTCAGTAATTATGTCAATATAAATTTAAGACGACCTTCTTGGCGCTGCCCCCACTGTAATCAGTTTGTCTGTTATTTGGTTTTTCGCGTGGATCAAAATATGGTTAAGGTCCTGAGAGAGGTAGGAGAGAACATTGCTGAAGTGATAATCTCTATGGATGGATCATGGAAAGCTGTACTGGAGAATGGTGAGGACTTAGGTCAGGCACATGATAAGACCCTTCAAAGAGAAACATCTGAACAGGAAGAATCTACCCGTGTCTCATCTGCACTTCCTATTGTTTTGGATCTTACCGAGGATGATACTGAGATGGACACTGTGAGTACCTGTGAGACCGAAGACGTGAAACCTCTTTGCAACACAAACGGGGTTAATCAAACTGTTCCTGCTCATCTAGAGGATGACTTTTGGTCTGGCATTTACTTTCCTAATGGCTCGTTGACCTCCGGTATAAGGTCAGACACCCAAATGGATGGTGGTATCCCGCACCCTGGTCCTGCAAATTATTTACAGCCGCCTGTGTTGACTGATGCTCTTTCTCCTGTGTTTGATCGAGGAACTGAGAGCCATGGGAACACTAATCCTGTGGCATCTGCAATGCTTACTCAATATTCTTCTTCCAATAATTTGCAGTTACAACAGCCGCAGTTTGCAAGTTCAAATGCTACTGTTAGCAGTGAGTATGGGAGATTTGCGAACATAGTATTACCCAGGACACCAACAGCAGTTCAGGCCCTTCCTGCCCGGACGCCAGGATTGCAGCAAAGATCAAGAACTGGTTTCAATACTCCCCCTAGTGCCTCTCTTCTTTCACAGGTTGGCCAATCTGTCACACCTACAGCAAATGGTGTCAATGCAGTATGTAGTGATATGGAAAGGCAGCAACATTTTTCTAGGGCCCGAATGAATCCGCCTCAAGTGTCAAATGTCGCTCCTCCTTCAATGCAACCTCCATCACAAATAACACCGAACTGGGATTGTCATGGCCAATCTGCCCAACAGGTTGTTGGCCTTCCAGCTCCGAGTCAAATGCAGAGTGCTAACCAGACATCTGTTGGGCATATGGAGTTCCAAAATGCACATCTGCAGCAAGCTCTTAATCCAATGACTCCCCAGACTCTGGGTCCGTTTTCAAGCGCCAATGGATCATCTTCTCATCTCTTGCGGGCTCAAATCCAGCAAGGAAGTGTACGAGTTGGGACTGGTCAAACATCAAGTTCTTTAAACAACCAACAAAGGTTCATGATTGCTCAGCAGCGGCGAGCTGCTATGATGGCCAGGCAGTCTCCATCAACGCCAGATCAAAATCAATCCCCGAGAAACAGGCCAATTTTGGCGGCAAATGCTGAAGGTTTTAGGTCAGCAGCAATGGAGCAGGGCAGAAACATAGTGGGAACGGTGCAAGCAGTTTCTGGGGCTGATGGGTCACCAGATTTGTCATCTGGGGAGAACTGGCGACCAACAGGTCGGATGCGTGGAAGCCTGTCAGGCCGTGCTTACTCTGCTGCTCTTAACCAGTTCATAATTCAGCCAACCCAACCAACGCCAGCTGCTCCAAGACCTCCGTCAAATCTGTCCGCTCCACCACATCTTGTTGCCGCCCAACAGACATTGATTGCAAACGGGAGCACTCAGGTTCCTCAAACAAATAATAGCCATCCACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009893 GO:0009987 GO:0010033 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0031323 GO:0031325 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042762 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051176 GO:0065007 GO:0070647 GO:0071704 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04120 ko04630 ko05160 map04120 map04630 map05160

Pfam Domains

Protein Families

zf-MIZ

Protein Analysis

900

Amino Acids

97.15

Weight (kDa)

6.3

Isoelectric Point (pI)

42.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007854)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41580
fragaria_vesca	FvH4_5g03250 FvH4_5g03250 FvH4_5g03250 FvH4_5g03250 FvH4_5g03250
malus_domestica	MD06G1091800.v1.1 MD14G1112600.v1.1
prunus_persica	Prupe.5G107000_v2.0.a1 Prupe.5G107000_v2.0.a1
pyrus_communis	pycom06g08790 pycom14g10780
rosa_chinensis	RchiOBHm_Chr7g0196521
rosa_multiflora	Rmu_co8354373.1_g000001 Rmu_co8377057.1_g000001 Rmu_sc0013350.1_g000009 Rmu_sc0019310.1_g000002
rosa_roxburghii	Rroxscaffold_3G00259230
rosa_rugosa	Rorug07G0034400
rosa_samantha	Rh7AG158500 Rh7BG160500 Rh7CG166900 Rh7DG159700
rosa_wichuraiana	Rw7G013850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	665
AasI	GACNNNNNNGTC	1 cut(s)	2496
AccB1I	GGYRCC	1 cut(s)	748
AccB7I	CCANNNNNTGG	1 cut(s)	2152
AccBSI	CCGCTC	2 cut(s)	6, 2612
AccII	CGCG	2 cut(s)	159, 1119
AclI	AACGTT	2 cut(s)	54, 723
AclWI	GGATC	7 cut(s)	725, 790, 914, 1131, 1201, 1326, 2185
AcoI	YGGCCR	3 cut(s)	1852, 2017, 2307
AcsI	RAATTY	2 cut(s)	612, 1054
AcuI	CTGAAG	7 cut(s)	402, 738, 894, 1004, 1018, 1191, 2400
AcyI	GRCGYC	1 cut(s)	1781
AfaI	GTAC	3 cut(s)	1209, 1357, 2223
AfeI	AGCGCT	1 cut(s)	128
AfiI	CCNNNNNNNGG	6 cut(s)	551, 998, 1150, 1485, 1523, 2152
AflII	CTTAAG	1 cut(s)	773
AflIII	ACRYGT	2 cut(s)	559, 977
AgsI	TTSAA	8 cut(s)	181, 271, 814, 1256, 1692, 1816, 1974, 2166
AhdI	GACNNNNNGTC	2 cut(s)	1441, 2154
AjiI	CACGTC	2 cut(s)	142, 1375
AjnI	CCWGG	6 cut(s)	259, 744, 1522, 1742, 1783, 2309
Alw21I	GWGCWC	1 cut(s)	2663
Alw26I	GTCTC	6 cut(s)	371, 641, 907, 1297, 1358, 2322
AlwI	GGATC	7 cut(s)	725, 790, 914, 1131, 1201, 1326, 2185
AlwNI	CAGNNNCTG	3 cut(s)	923, 2152, 2444
Ama87I	CYCGRG	1 cut(s)	2347
Aor51HI	AGCGCT	1 cut(s)	128
ApaI	GGGCCC	1 cut(s)	1933
ApoI	RAATTY	2 cut(s)	612, 1054
Asp700I	GAANNNNTTC	1 cut(s)	612
AspLEI	GCGC	3 cut(s)	129, 1077, 2171
AspS9I	GGNCC	9 cut(s)	514, 740, 938, 1141, 1526, 1765, 1929, 1930, 2156
AsuC2I	CCSGG	2 cut(s)	546, 1777
AsuHPI	GGTGA	4 cut(s)	43, 852, 1232, 2451
AsuII	TTCGAA	1 cut(s)	581
AsuNHI	GCTAGC	1 cut(s)	452
AvaI	CYCGRG	1 cut(s)	2347
AvaII	GGWCC	4 cut(s)	740, 1141, 1526, 2156
BaeGI	GKGCMC	2 cut(s)	559, 1933
BalI	TGGCCA	3 cut(s)	1854, 2019, 2309
BanI	GGYRCC	1 cut(s)	748
BanII	GRGCYC	2 cut(s)	1933, 2203
BbsI	GAAGAC	2 cut(s)	590, 1377
Bbv12I	GWGCWC	1 cut(s)	2663
BceAI	ACGGC	3 cut(s)	101, 203, 2508
BcgI	CGANNNNNNTGC	2 cut(s)	2044, 2078
BciT130I	CCWGG	6 cut(s)	261, 746, 1524, 1744, 1785, 2311
BciVI	GTATCC	2 cut(s)	727, 1523
BcnI	CCSGG	2 cut(s)	546, 1777
BcoDI	GTCTC	6 cut(s)	371, 641, 907, 1297, 1358, 2322
BfaI	CTAG	5 cut(s)	398, 453, 1427, 1827, 1926
BfmI	CTRYAG	4 cut(s)	424, 588, 1869, 2117
BfoI	RGCGCY	3 cut(s)	130, 1078, 2172
BfrI	CTTAAG	1 cut(s)	773
BfuI	GTATCC	2 cut(s)	727, 1523
BglI	GCCNNNNNGGC	1 cut(s)	2520
BlpI	GCTNAGC	1 cut(s)	2283
Bme1390I	CCNGG	8 cut(s)	261, 546, 746, 1524, 1744, 1777, 1785, 2311
Bme18I	GGWCC	4 cut(s)	740, 1141, 1526, 2156
BmeRI	GACNNNNNGTC	2 cut(s)	1441, 2154
BmeT110I	CYCGRG	1 cut(s)	2347
BmgBI	CACGTC	2 cut(s)	142, 1375
BmgT120I	GGNCC	9 cut(s)	514, 740, 938, 1141, 1526, 1765, 1929, 1930, 2156
BmiI	GGNNCC	7 cut(s)	237, 742, 750, 939, 1931, 2157, 2670
BmrFI	CCNGG	8 cut(s)	261, 546, 746, 1524, 1744, 1777, 1785, 2311
BmrI	ACTGGG	1 cut(s)	2014
BmsI	GCATC	3 cut(s)	1552, 1631, 2493
BmtI	GCTAGC	1 cut(s)	456
BmuI	ACTGGG	1 cut(s)	2014
BoxI	GACNNNNGTC	2 cut(s)	1230, 2596
BpiI	GAAGAC	2 cut(s)	590, 1377
BpmI	CTGGAG	3 cut(s)	468, 855, 1232
Bpu1102I	GCTNAGC	1 cut(s)	2283
Bpu14I	TTCGAA	1 cut(s)	581
BpuEI	CTTGAG	2 cut(s)	234, 1932
BpuMI	CCSGG	2 cut(s)	546, 1777
BsaAI	YACGTR	1 cut(s)	980
BsaBI	GATNNNNATC	2 cut(s)	918, 2337
BsaHI	GRCGYC	1 cut(s)	1781
BsaI	GGTCTC	1 cut(s)	1358
BsaJI	CCNNGG	7 cut(s)	168, 260, 744, 1326, 1522, 1600, 1742
BsaWI	WCCGGW	1 cut(s)	1478
BsaXI	ACNNNNNCTCC	2 cut(s)	889, 919
Bsc4I	CCNNNNNNNGG	6 cut(s)	551, 998, 1150, 1485, 1523, 2152
Bse1I	ACTGG	9 cut(s)	451, 742, 769, 1215, 1813, 2009, 2239, 2489, 2548
Bse3DI	GCAATG	3 cut(s)	1164, 1635, 2406
Bse8I	GATNNNNATC	2 cut(s)	918, 2337
BseBI	CCWGG	6 cut(s)	261, 746, 1524, 1744, 1785, 2311
BseDI	CCNNGG	7 cut(s)	168, 260, 744, 1326, 1522, 1600, 1742
BseGI	GGATG	8 cut(s)	365, 442, 1195, 1336, 1438, 1510, 2508, 2689
BseJI	GATNNNNATC	2 cut(s)	918, 2337
BseLI	CCNNNNNNNGG	6 cut(s)	551, 998, 1150, 1485, 1523, 2152
BseMI	GCAATG	3 cut(s)	1164, 1635, 2406
BseMII	CTCAG	6 cut(s)	905, 1136, 1329, 1584, 2297, 2678
BseNI	ACTGG	9 cut(s)	451, 742, 769, 1215, 1813, 2009, 2239, 2489, 2548
BseRI	GAGGAG	1 cut(s)	1956
BseSI	GKGCMC	2 cut(s)	559, 1933
BsgI	GTGCAG	1 cut(s)	1284
Bsh1236I	CGCG	2 cut(s)	159, 1119
BshNI	GGYRCC	1 cut(s)	748
BsiHKAI	GWGCWC	1 cut(s)	2663
BsiHKCI	CYCGRG	1 cut(s)	2347
BsiSI	CCGG	4 cut(s)	239, 545, 1479, 1777
BslFI	GGGAC	2 cut(s)	948, 2245
BslI	CCNNNNNNNGG	6 cut(s)	551, 998, 1150, 1485, 1523, 2152
BsmAI	GTCTC	6 cut(s)	371, 641, 907, 1297, 1358, 2322
BsmFI	GGGAC	2 cut(s)	948, 2245
BsmI	GAATGC	2 cut(s)	349, 774
Bso31I	GGTCTC	1 cut(s)	1358
BsoBI	CYCGRG	1 cut(s)	2347
Bsp119I	TTCGAA	1 cut(s)	581
Bsp120I	GGGCCC	1 cut(s)	1929
Bsp1286I	GDGCHC	4 cut(s)	559, 1933, 2203, 2663
Bsp1720I	GCTNAGC	1 cut(s)	2283
Bsp19I	CCATGG	2 cut(s)	168, 1600
BspCNI	CTCAG	6 cut(s)	904, 1137, 1330, 1585, 2296, 2677
BspFNI	CGCG	2 cut(s)	159, 1119
BspHI	TCATGA	1 cut(s)	2274
BspLI	GGNNCC	7 cut(s)	237, 742, 750, 939, 1931, 2157, 2670
BspMAI	CTGCAG	2 cut(s)	428, 2121
BspOI	GCTAGC	1 cut(s)	456
BspPI	GGATC	7 cut(s)	725, 790, 914, 1131, 1201, 1326, 2185
BspT104I	TTCGAA	1 cut(s)	581
BspT107I	GGYRCC	1 cut(s)	748
BspTI	CTTAAG	1 cut(s)	773
BspTNI	GGTCTC	1 cut(s)	1358
BsrBI	CCGCTC	2 cut(s)	6, 2612
BsrDI	GCAATG	3 cut(s)	1164, 1635, 2406
BsrI	ACTGG	9 cut(s)	451, 742, 769, 1215, 1813, 2009, 2239, 2489, 2548
BssECI	CCNNGG	7 cut(s)	168, 260, 744, 1326, 1522, 1600, 1742
BssNI	GRCGYC	1 cut(s)	1781
BssT1I	CCWWGG	2 cut(s)	168, 1600
Bst2UI	CCWGG	6 cut(s)	261, 746, 1524, 1744, 1785, 2311
Bst4CI	ACNGT	7 cut(s)	901, 1088, 1351, 1414, 1702, 2431, 2697
Bst6I	CTCTTC	1 cut(s)	1842
BstACI	GRCGYC	1 cut(s)	1781
BstAFI	CTTAAG	1 cut(s)	773
BstBAI	YACGTR	1 cut(s)	980
BstBI	TTCGAA	1 cut(s)	581
BstC8I	GCNNGC	8 cut(s)	27, 454, 798, 2124, 2199, 2295, 2436, 2580
BstDEI	CTNAG	7 cut(s)	891, 1145, 1228, 1338, 1593, 2283, 2664
BstDSI	CCRYGG	2 cut(s)	168, 1600
BstEII	GGTNACC	1 cut(s)	2457
BstENI	CCTNNNNNAGG	2 cut(s)	996, 1148
BstF5I	GGATG	8 cut(s)	365, 442, 1195, 1336, 1438, 1510, 2508, 2689
BstFNI	CGCG	2 cut(s)	159, 1119
BstH2I	RGCGCY	3 cut(s)	130, 1078, 2172
BstHHI	GCGC	3 cut(s)	129, 1077, 2171
BstMAI	GTCTC	6 cut(s)	371, 641, 907, 1297, 1358, 2322
BstNI	CCWGG	6 cut(s)	261, 746, 1524, 1744, 1785, 2311
BstNSI	RCATGY	1 cut(s)	563
BstPAI	GACNNNNGTC	2 cut(s)	1230, 2596
BstPI	GGTNACC	1 cut(s)	2457
BstSCI	CCNGG	8 cut(s)	259, 544, 744, 1522, 1742, 1775, 1783, 2309
BstSFI	CTRYAG	4 cut(s)	424, 588, 1869, 2117
BstSLI	GKGCMC	2 cut(s)	559, 1933
BstUI	CGCG	2 cut(s)	159, 1119
BstV2I	GAAGAC	2 cut(s)	590, 1377
BstX2I	RGATCY	2 cut(s)	919, 1318
BstXI	CCANNNNNNTGG	1 cut(s)	1505
BstYI	RGATCY	2 cut(s)	919, 1318
BsuI	GTATCC	2 cut(s)	727, 1523
BtgI	CCRYGG	2 cut(s)	168, 1600
BtrI	CACGTC	2 cut(s)	142, 1375
BtsCI	GGATG	8 cut(s)	365, 442, 1195, 1336, 1438, 1510, 2508, 2689
BtsI	GCAGTG	1 cut(s)	1714
BtsIMutI	CAGTG	6 cut(s)	875, 897, 1028, 1084, 1347, 1714
Cac8I	GCNNGC	8 cut(s)	27, 454, 798, 2124, 2199, 2295, 2436, 2580
CaiI	CAGNNNCTG	3 cut(s)	923, 2152, 2444
CciI	TCATGA	1 cut(s)	2274
CfoI	GCGC	3 cut(s)	129, 1077, 2171
Cfr13I	GGNCC	9 cut(s)	514, 740, 938, 1141, 1526, 1765, 1929, 1930, 2156
CseI	GACGC	1 cut(s)	1789
Csp6I	GTAC	3 cut(s)	1208, 1356, 2222
CviAII	CATG	8 cut(s)	169, 319, 560, 1197, 1241, 1601, 2015, 2275
CviQI	GTAC	3 cut(s)	1208, 1356, 2222
DdeI	CTNAG	7 cut(s)	891, 1145, 1228, 1338, 1593, 2283, 2664
DraI	TTTAAA	1 cut(s)	2256
DrdI	GACNNNNNNGTC	1 cut(s)	2496
DriI	GACNNNNNGTC	2 cut(s)	1441, 2154
DseDI	GACNNNNNNGTC	1 cut(s)	2496
EaeI	YGGCCR	3 cut(s)	1852, 2017, 2307
Eam1104I	CTCTTC	1 cut(s)	1842
Eam1105I	GACNNNNNGTC	2 cut(s)	1441, 2154
EarI	CTCTTC	1 cut(s)	1842
EciI	GGCGGA	2 cut(s)	660, 1932
Eco130I	CCWWGG	2 cut(s)	168, 1600
Eco24I	GRGCYC	2 cut(s)	1933, 2203
Eco31I	GGTCTC	1 cut(s)	1358
Eco47I	GGWCC	4 cut(s)	740, 1141, 1526, 2156
Eco47III	AGCGCT	1 cut(s)	128
Eco57I	CTGAAG	7 cut(s)	402, 738, 894, 1004, 1018, 1191, 2400
Eco88I	CYCGRG	1 cut(s)	2347
Eco91I	GGTNACC	1 cut(s)	2457
EcoNI	CCTNNNNNAGG	2 cut(s)	996, 1148
EcoO109I	RGGNCCY	3 cut(s)	1141, 1765, 1929
EcoO65I	GGTNACC	1 cut(s)	2457
EcoRII	CCWGG	6 cut(s)	259, 744, 1522, 1742, 1783, 2309
EcoT14I	CCWWGG	2 cut(s)	168, 1600
EcoT38I	GRGCYC	2 cut(s)	1933, 2203
ErhI	CCWWGG	2 cut(s)	168, 1600
FaeI	CATG	8 cut(s)	172, 322, 563, 1200, 1244, 1604, 2018, 2278
FalI	AAGNNNNNCTT	2 cut(s)	1051, 1083
FaqI	GGGAC	2 cut(s)	948, 2245
FatI	CATG	8 cut(s)	168, 318, 559, 1196, 1240, 1600, 2014, 2274
FauI	CCCGC	2 cut(s)	1524, 2190
FauNDI	CATATG	1 cut(s)	2094
FokI	GGATG	8 cut(s)	372, 449, 1202, 1343, 1445, 1517, 2515, 2676
FriOI	GRGCYC	2 cut(s)	1933, 2203
FspBI	CTAG	5 cut(s)	398, 453, 1427, 1827, 1926
GlaI	GCGC	3 cut(s)	128, 1076, 2170
GsuI	CTGGAG	3 cut(s)	468, 855, 1232
HaeII	RGCGCY	3 cut(s)	130, 1078, 2172
HapII	CCGG	4 cut(s)	239, 545, 1479, 1777
HgaI	GACGC	1 cut(s)	1789
HhaI	GCGC	3 cut(s)	129, 1077, 2171
Hin1I	GRCGYC	1 cut(s)	1781
Hin1II	CATG	8 cut(s)	172, 322, 563, 1200, 1244, 1604, 2018, 2278
Hin6I	GCGC	3 cut(s)	127, 1075, 2169
HinP1I	GCGC	3 cut(s)	127, 1075, 2169
HincII	GTYRAC	3 cut(s)	97, 1473, 1557
HindII	GTYRAC	3 cut(s)	97, 1473, 1557
HinfI	GANTC	7 cut(s)	108, 914, 1280, 1939, 2056, 2140, 2149
HpaI	GTTAAC	1 cut(s)	97
HpaII	CCGG	4 cut(s)	239, 545, 1479, 1777
HphI	GGTGA	4 cut(s)	43, 852, 1232, 2451
Hpy166II	GTNNAC	5 cut(s)	97, 682, 1473, 1557, 2222
Hpy188I	TCNGA	8 cut(s)	51, 370, 913, 919, 1270, 1492, 2055, 2502
Hpy188III	TCNNGA	8 cut(s)	201, 251, 533, 923, 1144, 1427, 1803, 2275
Hpy8I	GTNNAC	5 cut(s)	97, 682, 1473, 1557, 2222
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	9 cut(s)	708, 762, 918, 1077, 1262, 1778, 1980, 2054, 2375
HpyCH4III	ACNGT	7 cut(s)	901, 1088, 1351, 1414, 1702, 2431, 2697
HpyCH4IV	ACGT	5 cut(s)	54, 141, 723, 979, 1374
HpyF3I	CTNAG	7 cut(s)	891, 1145, 1228, 1338, 1593, 2283, 2664
HpySE526I	ACGT	5 cut(s)	54, 141, 723, 979, 1374
Hsp92I	GRCGYC	1 cut(s)	1781
Hsp92II	CATG	8 cut(s)	172, 322, 563, 1200, 1244, 1604, 2018, 2278
HspAI	GCGC	3 cut(s)	127, 1075, 2169
KspAI	GTTAAC	1 cut(s)	97
LmnI	GCTCC	7 cut(s)	449, 1969, 2056, 2404, 2590, 2617, 2658
LweI	GCATC	3 cut(s)	1552, 1631, 2493
MaeI	CTAG	5 cut(s)	398, 453, 1427, 1827, 1926
MaeII	ACGT	5 cut(s)	54, 141, 723, 979, 1374
MaeIII	GTNAC	6 cut(s)	724, 760, 818, 1665, 1861, 2457
MbiI	CCGCTC	2 cut(s)	6, 2612
MfeI	CAATTG	1 cut(s)	958
MflI	RGATCY	2 cut(s)	919, 1318
MhlI	GDGCHC	4 cut(s)	559, 1933, 2203, 2663
MlsI	TGGCCA	3 cut(s)	1854, 2019, 2309
MluNI	TGGCCA	3 cut(s)	1854, 2019, 2309
MlyI	GAGTC	4 cut(s)	117, 2065, 2134, 2143
MmeI	TCCRAC	2 cut(s)	37, 2480
Mox20I	TGGCCA	3 cut(s)	1854, 2019, 2309
MroXI	GAANNNNTTC	1 cut(s)	612
MscI	TGGCCA	3 cut(s)	1854, 2019, 2309
MslI	CAYNNNNRTG	2 cut(s)	482, 1499
Msp20I	TGGCCA	3 cut(s)	1854, 2019, 2309
MspA1I	CMGCKG	2 cut(s)	2290, 2582
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	4 cut(s)	239, 545, 1479, 1777
MspR9I	CCNGG	8 cut(s)	261, 546, 746, 1524, 1744, 1777, 1785, 2311
MunI	CAATTG	1 cut(s)	958
Mva1269I	GAATGC	2 cut(s)	349, 774
MvaI	CCWGG	6 cut(s)	261, 746, 1524, 1744, 1785, 2311
MvnI	CGCG	2 cut(s)	159, 1119
NciI	CCSGG	2 cut(s)	546, 1777
NcoI	CCATGG	2 cut(s)	168, 1600
NdeI	CATATG	1 cut(s)	2094
NheI	GCTAGC	1 cut(s)	452
NlaIII	CATG	8 cut(s)	172, 322, 563, 1200, 1244, 1604, 2018, 2278
NlaIV	GGNNCC	7 cut(s)	237, 742, 750, 939, 1931, 2157, 2670
NmeAIII	GCCGAG	1 cut(s)	148
NmuCI	GTSAC	3 cut(s)	760, 1861, 2457
NspI	RCATGY	1 cut(s)	563
NspV	TTCGAA	1 cut(s)	581
PagI	TCATGA	1 cut(s)	2274
PciI	ACATGT	1 cut(s)	559
PctI	GAATGC	2 cut(s)	349, 774
PdmI	GAANNNNTTC	1 cut(s)	612
PfeI	GAWTC	3 cut(s)	914, 1280, 1939
PflMI	CCANNNNNTGG	1 cut(s)	2152
PleI	GAGTC	4 cut(s)	116, 2064, 2134, 2143
PpsI	GAGTC	4 cut(s)	116, 2064, 2134, 2143
Ppu21I	YACGTR	1 cut(s)	980
PpuMI	RGGWCCY	1 cut(s)	1141
PscI	ACATGT	1 cut(s)	559
PshAI	GACNNNNGTC	2 cut(s)	1230, 2596
PsiI	TTATAA	1 cut(s)	665
Psp1406I	AACGTT	2 cut(s)	54, 723
Psp5II	RGGWCCY	1 cut(s)	1141
Psp6I	CCWGG	6 cut(s)	259, 744, 1522, 1742, 1783, 2309
PspEI	GGTNACC	1 cut(s)	2457
PspGI	CCWGG	6 cut(s)	259, 744, 1522, 1742, 1783, 2309
PspN4I	GGNNCC	7 cut(s)	237, 742, 750, 939, 1931, 2157, 2670
PspOMI	GGGCCC	1 cut(s)	1929
PspPI	GGNCC	9 cut(s)	514, 740, 938, 1141, 1526, 1765, 1929, 1930, 2156
PspPPI	RGGWCCY	1 cut(s)	1141
PstI	CTGCAG	2 cut(s)	428, 2121
PstNI	CAGNNNCTG	3 cut(s)	923, 2152, 2444
PsuI	RGATCY	2 cut(s)	919, 1318
PvuII	CAGCTG	1 cut(s)	2582
RsaI	GTAC	3 cut(s)	1209, 1357, 2223
RsaNI	GTAC	3 cut(s)	1208, 1356, 2222
RseI	CAYNNNNRTG	2 cut(s)	482, 1499
Sau96I	GGNCC	9 cut(s)	514, 740, 938, 1141, 1526, 1765, 1929, 1930, 2156
SchI	GAGTC	4 cut(s)	117, 2065, 2134, 2143
ScrFI	CCNGG	8 cut(s)	261, 546, 746, 1524, 1744, 1777, 1785, 2311
SduI	GDGCHC	4 cut(s)	559, 1933, 2203, 2663
SfaNI	GCATC	3 cut(s)	1552, 1631, 2493
SfcI	CTRYAG	4 cut(s)	424, 588, 1869, 2117
SfuI	TTCGAA	1 cut(s)	581
SinI	GGWCC	4 cut(s)	740, 1141, 1526, 2156
SmiMI	CAYNNNNRTG	2 cut(s)	482, 1499
SmlI	CTYRAG	3 cut(s)	249, 773, 1947
SmoI	CTYRAG	3 cut(s)	249, 773, 1947
SspI	AATATT	2 cut(s)	596, 1643
SspMI	CTAG	5 cut(s)	398, 453, 1427, 1827, 1926
StyD4I	CCNGG	8 cut(s)	259, 544, 744, 1522, 1742, 1775, 1783, 2309
StyI	CCWWGG	2 cut(s)	168, 1600
TaaI	ACNGT	7 cut(s)	901, 1088, 1351, 1414, 1702, 2431, 2697
TaiI	ACGT	5 cut(s)	57, 144, 726, 982, 1377
TaqI	TCGA	5 cut(s)	534, 581, 616, 1029, 1585
TaqII	GACCGA	1 cut(s)	1382
TatI	WGTACW	1 cut(s)	1207
TauI	GCSGC	9 cut(s)	73, 116, 137, 162, 1549, 1678, 2293, 2372, 2633
TfiI	GAWTC	3 cut(s)	914, 1280, 1939
TscAI	CASTG	6 cut(s)	882, 904, 1028, 1091, 1354, 1714
TseFI	GTSAC	3 cut(s)	760, 1861, 2457
Tsp45I	GTSAC	3 cut(s)	760, 1861, 2457
TspDTI	ATGAA	4 cut(s)	521, 1952, 2263, 2542
TspGWI	ACGGA	2 cut(s)	2148, 2586
TspRI	CASTG	6 cut(s)	882, 904, 1028, 1091, 1354, 1714
Van91I	CCANNNNNTGG	1 cut(s)	2152
Vha464I	CTTAAG	1 cut(s)	773
VpaK11BI	GGWCC	4 cut(s)	740, 1141, 1526, 2156
XagI	CCTNNNNNAGG	2 cut(s)	996, 1148
XapI	RAATTY	2 cut(s)	612, 1054
XbaI	TCTAGA	1 cut(s)	1426
XceI	RCATGY	1 cut(s)	563
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1505, 2036, 2084
XmnI	GAANNNNTTC	1 cut(s)	612
XspI	CTAG	5 cut(s)	398, 453, 1427, 1827, 1926

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.