Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007854

Physical Location & Seq

Genomic Coordinates Forward (+)

14534577 .. 14541494

Gene Structure 6918 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17579

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGACCGGAACAACGCTTACACCGCAGGCGGCGAGTAACTTAGTCAGTCTCAATATTGGTGGCGGCGCCGGGCAGCAGGTCTCGGCTTCGTTCGTCAACTCCTTCCGAATCACCGCCGTCGCCGACCGGCTGCTCGCTCACGTCCAGTCTGGTTATCGCGGCGATGCCATGGAGTTCTTCAACCTCTGCCTCTCTCTTTCCAGAGGAATTGACTATGCCGTTGCGAACAATGAGGTTCCGGCGAAGGCGTCCGATTTGCCTGTTCTGTTGAGACAGATATGCCAAAGGAAAAACAATGACGTTTTGCTAGCTGCTATCATGGTGCTGATGATATCTGTGAAGAATGCTTGTAGTACTGGATGGTTTTCGGAGAAGGAGAGTGAAGAGCTATTTTCTTTAGCTAATGAGATCTCCAGTAGGTTCTGTGGCTCGGGGGATATTACAACCGGACCTAGCTGTTCTCTTTCTAATGTTGAAAAAGTTATGGAGAGATATTATCCAACGATGAAGATGGGCCACATTCTTGCCTCTCTCGAAGTTAAGCCTGGATATGGAACGTACGTGCTTGATTTCCATATTTCAAAGAGTACCGCGTATTCTCCTCAAGAAAAAATTCGGTTATTTGTTGCACAAACAGATAATATGGAGACATCTTCTTGTATTATAAGTCCCCAACAAGTGAACTTTCTTCTCAATGGAAAGGGAGTAGATAAAAGGATCACTTGTTCAATGGATACTGGATCACAGTTGCCTTCAAATGTGACTGGAATGCTTAAATATGGAACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCACTATATCATAGTGGTTGCCTTTATGAGCATCGCATCATCACTTGACACCCCAGTACTGAAAGATTATGTTCAGCCCATCGTACCTTCCTCACCAGATACTGATATAGTTGAGGGGCGATCAAAAATATCACTTAATTGTCCCATAAGCTCTAGGCGTATCAAAACTCCTGTTAAAGGATATTTGTGCAAACATCTTCAGTGCTTCGACTTCGATAACTTTGTGGTTATGAATATAAGACGACCAAGGTGGCGCTGCCCCCATTGTAATCAGTATGTCTGCTATTTAGAAATTCGGATCGATCAAAATATGGTCAAGGTCCTGAGAGAGGTAGGAGAGAAATTTTCTCAAGTAATTATCTCTGAAGATGGATCATGGAAGGTTGAGTTGGAAAAAGATGATGATCTAGATGTGGCAGACAAACTGAAAGAAACATCTGAGAAGGATGAAAGTACTCCAGGTCTTAGTGTTATGGATCTTACCAATGATGATGATATTGAGATGGAAACGGCTAGTGCTTGTGGACCTGAAGATGTGAAACCTTTGAGCAATACAAACACTGCTCAGCTAGAGGATGACTTTTGGTCTGGAGTTTACTTGGCTAATAGCGGGCTCACCCCTGGCACACAATTGGCTAATTGTATCTCTCACTCTGGTCCCAGTTCTTTACAACCTTCCTTGTTGTCTGATGCTGTTTCTCTTGCACTTAATCGAGAAGCTGGGAGTCATAGGAACACAGATTTTTTGATGTCTGTAATGCATAATCAATTTTCTACTCCCAATAATGTGAACTCACAACAGTTGCAATCTGCAAATCTGATTGGTAGCAATGAGTATGGGATATCACAAATATTACCCAGAGAACTGGGCTCCGGGCTGCCAATAGTAAGGAATCCAATAGCAGTCCAGGCCCTTCCAGCATCGTCCCCAACAATGGGCTCGCAACAAAGACCCAGAACTAGTTTCAATAACTCAGCTCCCAATATTGCCTCCCTCACTTCTCAGGCCGGCCAGTCTATCACTTCCCCAGCAAATGTTCTCAATGCAGTATGTAGCGACTTGGAAAGGCAACAGCACTTCTCTAGGCCCCGAATGAATCCAGTTCAAGTGTCAGACATTGCTTCATCTTCATTGCATCATGGCTCAAGAACAACACAGAATCGGGTTCCCCTAGATCGGTCCTTTACTCATGGTCAATCTGCTGTTGGCATTCCGGTTCCAAGCCAATTGCAAAGTGCTAGCAGAGTATCTTCGGGGCTCCAGGGGTTCACAAATGCACACCTACAGCAAACTTTTAATCCGAGGCCTCACCCAACTGTGGGCCAGTCTTCAAGTGCACATTCCTCGCGGTCCCATGTGATGCAGGGGAGTGCACAAGTTGGAATTGGTCAAACACCAAGTTCTTTAAACAACCAACAGAGTTTCATAATGGCTGCTCAGCGAGCTGCTCAGGCCAGGCAGTCTTCACCAATGACAGCACAAAATCAAACTCCCAGAACCAGGCCATCTTTGTCTGTAAATGCTGCAGGGTTTAGAGGATCGGCAGGGGATCAGCGTGGAAACATTGGAGGAACTGTCCAAGCAGTTTCAGGGGCTGATGGGTTGGGGAATTCACCATCTGAACAGAATTGGCGACCAACAGGTCGAATGCGTGGAAGTCTCTCAGGTCAGGCTTATAGTGCTGCTTTGAACCAGTTCATAATTCGGCCAACCCAACCAACTGAAACTGCGAGACCTGCACCACACCTGACTCCTCCCTCACACCTGACCACTCCATCACACCTGACCCCTCCTCCACACCTGACCCCTCCCCCACACCTGACCCGTCCTCCACACCTGACCCGTTCCTCACACCTGACCTCTCCACCATCTGTTCCATCCCAGCTGCCTTCTAATATGAGCGCTCAGGTTCCTCAACTACCTAATAATCATCCTCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009893 GO:0009987 GO:0010033 GO:0016740 GO:0016925 GO:0018193 GO:0018205 GO:0019222 GO:0019538 GO:0019787 GO:0019789 GO:0031323 GO:0031325 GO:0032446 GO:0033993 GO:0036211 GO:0042221 GO:0042762 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051176 GO:0065007 GO:0070647 GO:0071704 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04120 ko04630 ko05160 map04120 map04630 map05160

Pfam Domains

Protein Families

zf-MIZ

Protein Analysis

919

Amino Acids

99.24

Weight (kDa)

7.88

Isoelectric Point (pI)

48.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-Nse	PF11789	312 - 362	7.1e-06	Zinc-finger of the MIZ type in Nse subunit
zf-MIZ	PF02891	316 - 364	7.2e-19	MIZ/SP-RING zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007854)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41580
fragaria_vesca	FvH4_5g03250 FvH4_5g03250 FvH4_5g03250 FvH4_5g03250 FvH4_5g03250
malus_domestica	MD06G1091800.v1.1 MD14G1112600.v1.1
prunus_persica	Prupe.5G107000_v2.0.a1 Prupe.5G107000_v2.0.a1
pyrus_communis	pycom06g08790 pycom14g10780
rosa_chinensis	RchiOBHm_Chr7g0196521
rosa_multiflora	Rmu_co8354373.1_g000001 Rmu_co8377057.1_g000001 Rmu_sc0013350.1_g000009 Rmu_sc0019310.1_g000002
rosa_roxburghii	Rroxscaffold_3G00259230
rosa_rugosa	Rorug07G0034400
rosa_samantha	Rh7AG158500 Rh7BG160500 Rh7CG166900 Rh7DG159700
rosa_wichuraiana	Rw7G013850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	665
AasI	GACNNNNNNGTC	1 cut(s)	2460
Acc36I	ACCTGC	2 cut(s)	67, 2563
AccB1I	GGYRCC	1 cut(s)	65
AccII	CGCG	3 cut(s)	159, 593, 2167
AciI	CCGC	8 cut(s)	23, 29, 63, 114, 159, 591, 1428, 2167
AclWI	GGATC	7 cut(s)	725, 748, 1124, 1198, 1302, 2365, 2376
AcoI	YGGCCR	2 cut(s)	1828, 2525
AcsI	RAATTY	4 cut(s)	612, 1110, 1160, 2428
AcuI	CTGAAG	3 cut(s)	1001, 1203, 1368
AcyI	GRCGYC	2 cut(s)	66, 248
AfaI	GTAC	6 cut(s)	355, 560, 589, 876, 903, 1273
AfeI	AGCGCT	1 cut(s)	2722
AfiI	CCNNNNNNNGG	9 cut(s)	551, 995, 1147, 1753, 1754, 1995, 2137, 2138, 2319
AhdI	GACNNNNNGTC	1 cut(s)	1402
AhlI	ACTAGT	1 cut(s)	1778
AjiI	CACGTC	1 cut(s)	142
AjnI	CCWGG	7 cut(s)	544, 1276, 1438, 1725, 2079, 2273, 2318
AjuI	GAANNNNNNNTTGG	2 cut(s)	1190, 1222
AloI	GAACNNNNNNTCC	2 cut(s)	709, 741
Alw21I	GWGCWC	2 cut(s)	2158, 2194
Alw26I	GTCTC	6 cut(s)	53, 85, 265, 641, 2483, 2545
Alw44I	GTGCAC	2 cut(s)	2154, 2190
AlwI	GGATC	7 cut(s)	725, 748, 1124, 1198, 1302, 2365, 2376
AlwNI	CAGNNNCTG	2 cut(s)	920, 2414
Ama87I	CYCGRG	1 cut(s)	430
Aor51HI	AGCGCT	1 cut(s)	2722
ApaLI	GTGCAC	2 cut(s)	2154, 2190
ApoI	RAATTY	4 cut(s)	612, 1110, 1160, 2428
Asp700I	GAANNNNTTC	2 cut(s)	612, 2513
AspLEI	GCGC	3 cut(s)	68, 1074, 2723
AsuC2I	CCSGG	2 cut(s)	70, 1693
AsuHPI	GGTGA	6 cut(s)	103, 903, 1426, 2120, 2277, 2424
AsuNHI	GCTAGC	2 cut(s)	307, 2057
AvaI	CYCGRG	1 cut(s)	430
AvaII	GGWCC	6 cut(s)	449, 1138, 1343, 1475, 1998, 2169
BaeGI	GKGCMC	2 cut(s)	2158, 2194
BanI	GGYRCC	1 cut(s)	65
BanII	GRGCYC	4 cut(s)	1434, 1691, 1760, 2079
BbsI	GAAGAC	2 cut(s)	2139, 2274
Bbv12I	GWGCWC	2 cut(s)	2158, 2194
BceAI	ACGGC	3 cut(s)	101, 203, 1344
BcgI	CGANNNNNNTGC	2 cut(s)	2145, 2179
BciT130I	CCWGG	7 cut(s)	546, 1278, 1440, 1727, 2081, 2275, 2320
BciVI	GTATCC	1 cut(s)	727
BcnI	CCSGG	2 cut(s)	70, 1693
BcoDI	GTCTC	6 cut(s)	53, 85, 265, 641, 2483, 2545
BcuI	ACTAGT	1 cut(s)	1778
BfmI	CTRYAG	2 cut(s)	2102, 2343
BfoI	RGCGCY	3 cut(s)	69, 1075, 2724
BfuAI	ACCTGC	2 cut(s)	67, 2563
BfuI	GTATCC	1 cut(s)	727
BglII	AGATCT	1 cut(s)	408
BlpI	GCTNAGC	2 cut(s)	1383, 2256
BmcAI	AGTACT	3 cut(s)	355, 876, 1273
Bme1390I	CCNGG	9 cut(s)	70, 546, 1278, 1440, 1693, 1727, 2081, 2275, 2320
Bme18I	GGWCC	6 cut(s)	449, 1138, 1343, 1475, 1998, 2169
BmeRI	GACNNNNNGTC	1 cut(s)	1402
BmeT110I	CYCGRG	1 cut(s)	430
BmgBI	CACGTC	1 cut(s)	142
BmrFI	CCNGG	9 cut(s)	70, 546, 1278, 1440, 1693, 1727, 2081, 2275, 2320
BmrI	ACTGGG	3 cut(s)	866, 1473, 1694
BmsI	GCATC	7 cut(s)	154, 858, 863, 1498, 1748, 1963, 2169
BmtI	GCTAGC	2 cut(s)	311, 2061
BmuI	ACTGGG	3 cut(s)	866, 1473, 1694
BpiI	GAAGAC	2 cut(s)	2139, 2274
BpmI	CTGGAG	4 cut(s)	397, 1260, 1428, 2063
Bpu10I	CCTNAGC	2 cut(s)	2268, 2724
Bpu1102I	GCTNAGC	2 cut(s)	1383, 2256
BpuEI	CTTGAG	3 cut(s)	588, 1152, 1948
BpuMI	CCSGG	2 cut(s)	70, 1693
Bsa29I	ATCGAT	1 cut(s)	1119
BsaAI	YACGTR	1 cut(s)	562
BsaBI	GATNNNNATC	1 cut(s)	1221
BsaHI	GRCGYC	2 cut(s)	66, 248
BsaI	GGTCTC	2 cut(s)	85, 2545
BsaJI	CCNNGG	5 cut(s)	168, 1064, 1438, 2080, 2120
BsaWI	WCCGGW	3 cut(s)	5, 446, 2032
BsaXI	ACNNNNNCTCC	6 cut(s)	2379, 2409, 2596, 2626, 2632, 2662
Bsc4I	CCNNNNNNNGG	9 cut(s)	551, 995, 1147, 1753, 1754, 1995, 2137, 2138, 2319
Bse118I	RCCGGY	2 cut(s)	126, 1826
Bse3DI	GCAATG	3 cut(s)	1654, 1935, 1949
Bse8I	GATNNNNATC	1 cut(s)	1221
BseBI	CCWGG	7 cut(s)	546, 1278, 1440, 1727, 2081, 2275, 2320
BseCI	ATCGAT	1 cut(s)	1119
BseDI	CCNNGG	5 cut(s)	168, 1064, 1438, 2080, 2120
BseGI	GGATG	5 cut(s)	365, 1270, 1399, 2696, 2749
BseJI	GATNNNNATC	1 cut(s)	1221
BseLI	CCNNNNNNNGG	9 cut(s)	551, 995, 1147, 1753, 1754, 1995, 2137, 2138, 2319
BseMI	GCAATG	3 cut(s)	1654, 1935, 1949
BseMII	CTCAG	9 cut(s)	1133, 1248, 1397, 1806, 1835, 2270, 2282, 2496, 2738
BseRI	GAGGAG	3 cut(s)	591, 2562, 2601
BseSI	GKGCMC	2 cut(s)	2158, 2194
BseYI	CCCAGC	3 cut(s)	1538, 1846, 2700
BsgI	GTGCAG	1 cut(s)	2541
Bsh1236I	CGCG	3 cut(s)	159, 593, 2167
Bsh1285I	CGRYCG	1 cut(s)	127
BshNI	GGYRCC	1 cut(s)	65
BshVI	ATCGAT	1 cut(s)	1119
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	2158, 2194
BsiHKCI	CYCGRG	1 cut(s)	430
BsiSI	CCGG	8 cut(s)	6, 69, 127, 239, 447, 1692, 1827, 2033
BsiWI	CGTACG	1 cut(s)	558
BslFI	GGGAC	5 cut(s)	654, 945, 1461, 1729, 2155
BslI	CCNNNNNNNGG	9 cut(s)	551, 995, 1147, 1753, 1754, 1995, 2137, 2138, 2319
BsmAI	GTCTC	6 cut(s)	53, 85, 265, 641, 2483, 2545
BsmFI	GGGAC	5 cut(s)	654, 945, 1461, 1729, 2155
BsmI	GAATGC	4 cut(s)	349, 774, 2028, 2472
Bso31I	GGTCTC	2 cut(s)	85, 2545
BsoBI	CYCGRG	1 cut(s)	430
Bsp1286I	GDGCHC	6 cut(s)	1434, 1691, 1760, 2079, 2158, 2194
Bsp1720I	GCTNAGC	2 cut(s)	1383, 2256
Bsp19I	CCATGG	1 cut(s)	168
BspACI	CCGC	8 cut(s)	23, 29, 63, 114, 159, 591, 1428, 2167
BspCNI	CTCAG	9 cut(s)	1134, 1249, 1396, 1805, 1834, 2269, 2281, 2495, 2737
BspDI	ATCGAT	1 cut(s)	1119
BspFNI	CGCG	3 cut(s)	159, 593, 2167
BspMAI	CTGCAG	1 cut(s)	2347
BspMI	ACCTGC	2 cut(s)	67, 2563
BspOI	GCTAGC	2 cut(s)	311, 2061
BspPI	GGATC	7 cut(s)	725, 748, 1124, 1198, 1302, 2365, 2376
BspQI	GCTCTTC	1 cut(s)	378
BspT107I	GGYRCC	1 cut(s)	65
BspTNI	GGTCTC	2 cut(s)	85, 2545
BsrDI	GCAATG	3 cut(s)	1654, 1935, 1949
BsrFI	RCCGGY	2 cut(s)	126, 1826
BssAI	RCCGGY	2 cut(s)	126, 1826
BssECI	CCNNGG	5 cut(s)	168, 1064, 1438, 2080, 2120
BssNI	GRCGYC	2 cut(s)	66, 248
BssT1I	CCWWGG	2 cut(s)	168, 1064
Bst2UI	CCWGG	7 cut(s)	546, 1278, 1440, 1727, 2081, 2275, 2320
Bst4CI	ACNGT	4 cut(s)	747, 1620, 2137, 2395
Bst6I	CTCTTC	1 cut(s)	378
BstACI	GRCGYC	2 cut(s)	66, 248
BstBAI	YACGTR	1 cut(s)	562
BstC8I	GCNNGC	8 cut(s)	27, 135, 309, 1430, 1760, 1828, 2059, 2262
BstDSI	CCRYGG	1 cut(s)	168
BstENI	CCTNNNNNAGG	2 cut(s)	993, 1145
BstF5I	GGATG	5 cut(s)	365, 1270, 1399, 2696, 2749
BstFNI	CGCG	3 cut(s)	159, 593, 2167
BstH2I	RGCGCY	3 cut(s)	69, 1075, 2724
BstHHI	GCGC	3 cut(s)	68, 1074, 2723
BstMAI	GTCTC	6 cut(s)	53, 85, 265, 641, 2483, 2545
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	7 cut(s)	22, 1727, 1736, 2261, 2270, 2498, 2555
BstNI	CCWGG	7 cut(s)	546, 1278, 1440, 1727, 2081, 2275, 2320
BstSCI	CCNGG	9 cut(s)	68, 544, 1276, 1438, 1691, 1725, 2079, 2273, 2318
BstSFI	CTRYAG	2 cut(s)	2102, 2343
BstSLI	GKGCMC	2 cut(s)	2158, 2194
BstUI	CGCG	3 cut(s)	159, 593, 2167
BstV2I	GAAGAC	2 cut(s)	2139, 2274
BstX2I	RGATCY	2 cut(s)	408, 1294
BstXI	CCANNNNNNTGG	2 cut(s)	815, 1684
BstYI	RGATCY	2 cut(s)	408, 1294
Bsu15I	ATCGAT	1 cut(s)	1119
BsuI	GTATCC	1 cut(s)	727
BsuTUI	ATCGAT	1 cut(s)	1119
BtgI	CCRYGG	1 cut(s)	168
BtgZI	GCGATG	2 cut(s)	177, 835
BtrI	CACGTC	1 cut(s)	142
BtsCI	GGATG	5 cut(s)	365, 1270, 1399, 2696, 2749
BtsI	GCAGTG	1 cut(s)	1377
BtsIMutI	CAGTG	2 cut(s)	1025, 1377
BveI	ACCTGC	2 cut(s)	67, 2563
Cac8I	GCNNGC	8 cut(s)	27, 135, 309, 1430, 1760, 1828, 2059, 2262
CaiI	CAGNNNCTG	2 cut(s)	920, 2414
CfoI	GCGC	3 cut(s)	68, 1074, 2723
Cfr10I	RCCGGY	2 cut(s)	126, 1826
ClaI	ATCGAT	1 cut(s)	1119
CseI	GACGC	1 cut(s)	237
Csp6I	GTAC	6 cut(s)	354, 559, 588, 875, 902, 1272
CspCI	CAANNNNNGTGG	2 cut(s)	40, 75
CviAII	CATG	6 cut(s)	169, 319, 1194, 1958, 2009, 2174
CviQI	GTAC	6 cut(s)	354, 559, 588, 875, 902, 1272
DinI	GGCGCC	1 cut(s)	67
DraI	TTTAAA	1 cut(s)	2226
DrdI	GACNNNNNNGTC	1 cut(s)	2460
DriI	GACNNNNNGTC	1 cut(s)	1402
DseDI	GACNNNNNNGTC	1 cut(s)	2460
EaeI	YGGCCR	2 cut(s)	1828, 2525
Eam1104I	CTCTTC	1 cut(s)	378
Eam1105I	GACNNNNNGTC	1 cut(s)	1402
EarI	CTCTTC	1 cut(s)	378
Eco130I	CCWWGG	2 cut(s)	168, 1064
Eco147I	AGGCCT	1 cut(s)	2125
Eco24I	GRGCYC	4 cut(s)	1434, 1691, 1760, 2079
Eco31I	GGTCTC	2 cut(s)	85, 2545
Eco32I	GATATC	2 cut(s)	333, 1662
Eco47I	GGWCC	6 cut(s)	449, 1138, 1343, 1475, 1998, 2169
Eco47III	AGCGCT	1 cut(s)	2722
Eco57I	CTGAAG	3 cut(s)	1001, 1203, 1368
Eco88I	CYCGRG	1 cut(s)	430
EcoNI	CCTNNNNNAGG	2 cut(s)	993, 1145
EcoO109I	RGGNCCY	3 cut(s)	1138, 1729, 1905
EcoRI	GAATTC	1 cut(s)	2428
EcoRII	CCWGG	7 cut(s)	544, 1276, 1438, 1725, 2079, 2273, 2318
EcoRV	GATATC	2 cut(s)	333, 1662
EcoT14I	CCWWGG	2 cut(s)	168, 1064
EcoT22I	ATGCAT	1 cut(s)	1581
EcoT38I	GRGCYC	4 cut(s)	1434, 1691, 1760, 2079
EgeI	GGCGCC	1 cut(s)	67
EheI	GGCGCC	1 cut(s)	67
ErhI	CCWWGG	2 cut(s)	168, 1064
FaeI	CATG	6 cut(s)	172, 322, 1197, 1961, 2012, 2177
FalI	AAGNNNNNCTT	2 cut(s)	706, 738
FaqI	GGGAC	5 cut(s)	654, 945, 1461, 1729, 2155
FatI	CATG	6 cut(s)	168, 318, 1193, 1957, 2008, 2173
FauI	CCCGC	1 cut(s)	1421
FokI	GGATG	5 cut(s)	372, 1277, 1406, 2683, 2736
FriOI	GRGCYC	4 cut(s)	1434, 1691, 1760, 2079
FseI	GGCCGGCC	1 cut(s)	1830
GlaI	GCGC	3 cut(s)	67, 1073, 2722
GsaI	CCCAGC	3 cut(s)	1542, 1850, 2704
GsuI	CTGGAG	4 cut(s)	397, 1260, 1428, 2063
HaeII	RGCGCY	3 cut(s)	69, 1075, 2724
HapII	CCGG	8 cut(s)	6, 69, 127, 239, 447, 1692, 1827, 2033
HgaI	GACGC	1 cut(s)	237
HhaI	GCGC	3 cut(s)	68, 1074, 2723
Hin1I	GRCGYC	2 cut(s)	66, 248
Hin1II	CATG	6 cut(s)	172, 322, 1197, 1961, 2012, 2177
Hin6I	GCGC	3 cut(s)	66, 1072, 2721
HinP1I	GCGC	3 cut(s)	66, 1072, 2721
HincII	GTYRAC	1 cut(s)	97
HindII	GTYRAC	1 cut(s)	97
HinfI	GANTC	6 cut(s)	108, 1543, 1711, 1915, 1978, 2569
HpaII	CCGG	8 cut(s)	6, 69, 127, 239, 447, 1692, 1827, 2033
HphI	GGTGA	6 cut(s)	103, 903, 1426, 2120, 2277, 2424
Hpy166II	GTNNAC	8 cut(s)	97, 682, 1343, 1414, 1609, 2088, 2156, 2192
Hpy188III	TCNNGA	8 cut(s)	201, 533, 605, 1141, 1226, 1407, 1532, 1965
Hpy8I	GTNNAC	8 cut(s)	97, 682, 1343, 1414, 1609, 2088, 2156, 2192
Hpy99I	CGWCG	1 cut(s)	122
HpyCH4III	ACNGT	4 cut(s)	747, 1620, 2137, 2395
HpyCH4IV	ACGT	4 cut(s)	141, 300, 557, 561
HpyF10VI	GCNNNNNNNGC	7 cut(s)	22, 1727, 1736, 2261, 2270, 2498, 2555
HpySE526I	ACGT	4 cut(s)	141, 300, 557, 561
Hsp92I	GRCGYC	2 cut(s)	66, 248
Hsp92II	CATG	6 cut(s)	172, 322, 1197, 1961, 2012, 2177
HspAI	GCGC	3 cut(s)	66, 1072, 2721
KasI	GGCGCC	1 cut(s)	65
KroI	GCCGGC	1 cut(s)	1826
KroNI	GCCGGC	1 cut(s)	1828
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	3 cut(s)	1694, 1801, 2082
LweI	GCATC	7 cut(s)	154, 858, 863, 1498, 1748, 1963, 2169
MaeII	ACGT	4 cut(s)	141, 300, 557, 561
MaeIII	GTNAC	3 cut(s)	35, 760, 818
MfeI	CAATTG	2 cut(s)	1448, 2045
MflI	RGATCY	2 cut(s)	408, 1294
MhlI	GDGCHC	6 cut(s)	1434, 1691, 1760, 2079, 2158, 2194
Mly113I	GGCGCC	1 cut(s)	66
MlyI	GAGTC	2 cut(s)	1552, 2563
MmeI	TCCRAC	3 cut(s)	524, 1188, 2179
Mph1103I	ATGCAT	1 cut(s)	1581
MroNI	GCCGGC	1 cut(s)	1826
MroXI	GAANNNNTTC	2 cut(s)	612, 2513
MseI	TTAA	7 cut(s)	540, 774, 954, 993, 1527, 2115, 2225
MspA1I	CMGCKG	1 cut(s)	2704
MspI	CCGG	8 cut(s)	6, 69, 127, 239, 447, 1692, 1827, 2033
MspR9I	CCNGG	9 cut(s)	70, 546, 1278, 1440, 1693, 1727, 2081, 2275, 2320
MunI	CAATTG	2 cut(s)	1448, 2045
Mva1269I	GAATGC	4 cut(s)	349, 774, 2028, 2472
MvaI	CCWGG	7 cut(s)	546, 1278, 1440, 1727, 2081, 2275, 2320
MvnI	CGCG	3 cut(s)	159, 593, 2167
MwoI	GCNNNNNNNGC	7 cut(s)	22, 1727, 1736, 2261, 2270, 2498, 2555
NaeI	GCCGGC	1 cut(s)	1828
NarI	GGCGCC	1 cut(s)	66
NciI	CCSGG	2 cut(s)	70, 1693
NcoI	CCATGG	1 cut(s)	168
NgoMIV	GCCGGC	1 cut(s)	1826
NheI	GCTAGC	2 cut(s)	307, 2057
NlaIII	CATG	6 cut(s)	172, 322, 1197, 1961, 2012, 2177
NmeAIII	GCCGAG	1 cut(s)	62
NmuCI	GTSAC	2 cut(s)	760, 818
NsiI	ATGCAT	1 cut(s)	1581
PceI	AGGCCT	1 cut(s)	2125
PciSI	GCTCTTC	1 cut(s)	378
PctI	GAATGC	4 cut(s)	349, 774, 2028, 2472
PdiI	GCCGGC	1 cut(s)	1828
PdmI	GAANNNNTTC	2 cut(s)	612, 2513
PfeI	GAWTC	4 cut(s)	108, 1711, 1915, 1978
Pfl23II	CGTACG	1 cut(s)	558
PleI	GAGTC	2 cut(s)	1551, 2563
PluTI	GGCGCC	1 cut(s)	69
PpsI	GAGTC	2 cut(s)	1551, 2563
Ppu21I	YACGTR	1 cut(s)	562
PpuMI	RGGWCCY	1 cut(s)	1138
PsiI	TTATAA	1 cut(s)	665
Psp5II	RGGWCCY	1 cut(s)	1138
Psp6I	CCWGG	7 cut(s)	544, 1276, 1438, 1725, 2079, 2273, 2318
PspFI	CCCAGC	3 cut(s)	1538, 1846, 2700
PspGI	CCWGG	7 cut(s)	544, 1276, 1438, 1725, 2079, 2273, 2318
PspLI	CGTACG	1 cut(s)	558
PspPPI	RGGWCCY	1 cut(s)	1138
PsrI	GAACNNNNNNTAC	1 cut(s)	33
PstI	CTGCAG	1 cut(s)	2347
PstNI	CAGNNNCTG	2 cut(s)	920, 2414
PsuI	RGATCY	2 cut(s)	408, 1294
PvuII	CAGCTG	1 cut(s)	2704
RigI	GGCCGGCC	1 cut(s)	1830
RsaI	GTAC	6 cut(s)	355, 560, 589, 876, 903, 1273
RsaNI	GTAC	6 cut(s)	354, 559, 588, 875, 902, 1272
SapI	GCTCTTC	1 cut(s)	378
SaqAI	TTAA	7 cut(s)	540, 774, 954, 993, 1527, 2115, 2225
ScaI	AGTACT	3 cut(s)	355, 876, 1273
SchI	GAGTC	2 cut(s)	1552, 2563
ScrFI	CCNGG	9 cut(s)	70, 546, 1278, 1440, 1693, 1727, 2081, 2275, 2320
SduI	GDGCHC	6 cut(s)	1434, 1691, 1760, 2079, 2158, 2194
SfaNI	GCATC	7 cut(s)	154, 858, 863, 1498, 1748, 1963, 2169
SfcI	CTRYAG	2 cut(s)	2102, 2343
SfoI	GGCGCC	1 cut(s)	67
SinI	GGWCC	6 cut(s)	449, 1138, 1343, 1475, 1998, 2169
SmlI	CTYRAG	3 cut(s)	603, 1167, 1963
SmoI	CTYRAG	3 cut(s)	603, 1167, 1963
SpeI	ACTAGT	1 cut(s)	1778
SseBI	AGGCCT	1 cut(s)	2125
SsiI	CCGC	8 cut(s)	23, 29, 63, 114, 159, 591, 1428, 2167
SspDI	GGCGCC	1 cut(s)	65
SspI	AATATT	3 cut(s)	55, 1671, 1804
StuI	AGGCCT	1 cut(s)	2125
StyD4I	CCNGG	9 cut(s)	68, 544, 1276, 1438, 1691, 1725, 2079, 2273, 2318
StyI	CCWWGG	2 cut(s)	168, 1064
TaaI	ACNGT	4 cut(s)	747, 1620, 2137, 2395
TaiI	ACGT	4 cut(s)	144, 303, 560, 564
TaqI	TCGA	6 cut(s)	534, 1026, 1032, 1119, 1531, 2464
TaqII	GACCGA	1 cut(s)	1986
TatI	WGTACW	3 cut(s)	353, 874, 1271
TauI	GCSGC	3 cut(s)	32, 66, 162
TfiI	GAWTC	4 cut(s)	108, 1711, 1915, 1978
Tru1I	TTAA	7 cut(s)	540, 774, 954, 993, 1527, 2115, 2225
Tru9I	TTAA	7 cut(s)	540, 774, 954, 993, 1527, 2115, 2225
TscAI	CASTG	2 cut(s)	1025, 1384
TseFI	GTSAC	2 cut(s)	760, 818
Tsp45I	GTSAC	2 cut(s)	760, 818
TspDTI	ATGAA	8 cut(s)	521, 1064, 1281, 1928, 1932, 1938, 2233, 2506
TspRI	CASTG	2 cut(s)	1025, 1384
VneI	GTGCAC	2 cut(s)	2154, 2190
VpaK11BI	GGWCC	6 cut(s)	449, 1138, 1343, 1475, 1998, 2169
XagI	CCTNNNNNAGG	2 cut(s)	993, 1145
XapI	RAATTY	4 cut(s)	612, 1110, 1160, 2428
XbaI	TCTAGA	1 cut(s)	1225
XmnI	GAANNNNTTC	2 cut(s)	612, 2513
ZrmI	AGTACT	3 cut(s)	355, 876, 1273
Zsp2I	ATGCAT	1 cut(s)	1581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.