pycom06g11830

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
17033224 .. 17035381
2158 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g11830.2

Sequence Viewer

Length: 1536 bp
ATGGGAACCAAGGACTCTCTTTTTCTTTTCAATATTTTTTTTGGTCTTTTATCTAAATACGCTCTCTTTTTCCTTTTCGTTTTCAAATCTGTATGTGGGAAAGTAGGAATGAAGCTTGCCCATTTGTTTCATTTATGCCTAAATCGAGATCACCCCTGTCAGATTGTGCCTCCTTCCATGGCCGAATCTAACCTCGAAGAAGAAGACCAAGTTCTTCCACAAAGCCGACACGCTTACAATTTTGTCTGCTGTTACTCCTACTTCTTCACCTCCCTACTTTTGTTTTCCTCACTCTCTACTTTCTCCGAGGCTTCCCGCTCCATCCCAACAACCACCACCGCCACCCTTTCTCTCTCCTCCTTTTCCTCTCTCTCCTCCACCAACCCACCGTCAACCTTCCCTTCAAAACCATCTTCCCACGCCGACACCTCCAAAACCCTCGTCACATCTCTCACAATCTCCGCCGCCGCCGTCTTCCTCATCGTTTCAGTCATGGTGGTAATGAGATGCTTCGGATTCAGATCAAAACGCAAAGACAATGGAATCGTTGTGGAGAAGGACCATGTTGAAGAAAGCGGGGAGTTTAGCGTGAAGAAATTGAGTTGGGATTGGATAGAGAGATCTACTGATGGCTTCTCCAAGGTGATTGGAACTGGCGGGTTTAGTAATGTGTACTTGGCACGAAACCCGGGGCCTAATTCGGGCGATGGGTTCTGCTCAATTAAGATCCACAACGGCAGCGAGCGGCTGAGTCGGGTTTTTAAGCAAGAACTCGATATTCTCCTCCGCCTTGAGCACCACCGCATCGTCAAGCTTCTTGGCTACTCCGAAAACCAAGAGGAGGGTGCTCTGGTTTTCGAGTACGTCGCCAACGGAAATCTCCAAGAGAAGCTCCACGGCGGAGACGCCACCCCAGCACTGCCGTGGAAGAACCGAATGGCAATCGCCTTCCAAGTCGCACAAGCATTAGAATACCTGCACGAGAAATGCGCCCTCCAAATCGTTCACATGGACATCAAAGCCTCAAATATCTTACTCGACGAAAATCTCAACTGCAAGCTCTGCGATTTCGGATCAGCGAAGATGGGGTTTTCCTCAACCGTCCAACCGCCGTCGTCGATGAGAAATCAAGTCTTGACGATGATGGGCTCGCCGGGTTACACCGATCCGCACTACCTCCGAACCGGAATCGCTTCGAAGAAAAACGACGTGTACAGCTTCGGCGTTTTGATCTTGGAGCTCGTGACGGGAATGGAGGCGTTTTGCTCCGAGAAAGGGCAGTTCTTGACGACTTTGGTGGGGAGTAGGTTGAGAGACGGCGGTTGTGAGGCGGCGGAGTTGGTGGACCCGCGGCTGGGCGCGGCGGGGTTTGACCTCGAAGAGGCCAAGACCATGCTTGGTATTTCGGCAACGTGCTTGCGTCAGTCACCGACGCTGAGGCCTTCGGCTACTCAAATATTGGAAACCATTCAGGAGAAAGTATCGTCTGTTTCGTTTCTACAGTCACTATCTCATGACAAAGAAATCGTATATTAG

Protein Analysis

512

Amino Acids

56.37

Weight (kDa)

6.54

Isoelectric Point (pI)

39.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 984
AccBSI CCGCTC 2 cut(s) 318, 745
AccII CGCG 2 cut(s) 1351, 1361
AclWI GGATC 3 cut(s) 721, 1081, 1160
AcoI YGGCCR 1 cut(s) 180
AcyI GRCGYC 1 cut(s) 906
AfaI GTAC 3 cut(s) 674, 863, 1214
AfiI CCNNNNNNNGG 6 cut(s) 701, 841, 1275, 1354, 1355, 1381
AflIII ACRYGT 1 cut(s) 1209
AgsI TTSAA 4 cut(s) 31, 85, 405, 569
AjiI CACGTC 1 cut(s) 1210
AleI CACNNNNGTG 1 cut(s) 922
AluBI AGCT 6 cut(s) 115, 814, 892, 1060, 1218, 1240
AluI AGCT 6 cut(s) 115, 814, 892, 1060, 1218, 1240
Alw21I GWGCWC 3 cut(s) 798, 850, 1242
Alw26I GTCTC 2 cut(s) 897, 1308
AlwI GGATC 3 cut(s) 721, 1081, 1160
Ama87I CYCGRG 1 cut(s) 688
AoxI GGCC 4 cut(s) 180, 692, 1383, 1439
ApeKI GCWGC 1 cut(s) 738
ArsI GACNNNNNNTTYG 2 cut(s) 426, 458
Asp700I GAANNNNTTC 2 cut(s) 1192, 1467
AspLEI GCGC 2 cut(s) 992, 1361
AspS9I GGNCC 3 cut(s) 559, 692, 1345
AsuC2I CCSGG 3 cut(s) 689, 690, 1155
AsuHPI GGTGA 4 cut(s) 143, 259, 655, 1419
AsuII TTCGAA 1 cut(s) 1196
AvaI CYCGRG 1 cut(s) 688
AvaII GGWCC 2 cut(s) 559, 1345
BanII GRGCYC 2 cut(s) 1151, 1242
BauI CACGAG 2 cut(s) 980, 1241
BbsI GAAGAC 2 cut(s) 210, 466
Bbv12I GWGCWC 3 cut(s) 798, 850, 1242
BbvCI CCTCAGC 1 cut(s) 1436
BbvI GCAGC 1 cut(s) 750
BccI CCATC 6 cut(s) 329, 418, 623, 701, 1078, 1138
BceAI ACGGC 6 cut(s) 455, 751, 907, 913, 1096, 1333
BcnI CCSGG 3 cut(s) 689, 690, 1155
BcoDI GTCTC 2 cut(s) 897, 1308
BfmI CTRYAG 1 cut(s) 1499
BfuAI ACCTGC 1 cut(s) 984
BglII AGATCT 1 cut(s) 620
BisI GCNGC 7 cut(s) 465, 468, 739, 746, 1332, 1352, 1362
BlsI GCNGC 7 cut(s) 466, 469, 740, 747, 1333, 1353, 1363
Bme1390I CCNGG 3 cut(s) 689, 690, 1155
Bme18I GGWCC 2 cut(s) 559, 1345
BmeT110I CYCGRG 1 cut(s) 688
BmgBI CACGTC 1 cut(s) 1210
BmgT120I GGNCC 3 cut(s) 559, 692, 1345
BmiI GGNNCC 3 cut(s) 7, 693, 1347
BmrFI CCNGG 3 cut(s) 689, 690, 1155
BmsI GCATC 2 cut(s) 497, 813
BpiI GAAGAC 2 cut(s) 210, 466
Bpu10I CCTNAGC 1 cut(s) 1436
Bpu14I TTCGAA 1 cut(s) 1196
BpuEI CTTGAG 1 cut(s) 812
BpuMI CCSGG 3 cut(s) 689, 690, 1155
BsaBI GATNNNNATC 1 cut(s) 520
BsaHI GRCGYC 1 cut(s) 906
BsaJI CCNNGG 9 cut(s) 9, 177, 306, 639, 688, 689, 895, 923, 1349
BsaWI WCCGGW 1 cut(s) 1184
Bsc4I CCNNNNNNNGG 6 cut(s) 701, 841, 1275, 1354, 1355, 1381
Bse1I ACTGG 1 cut(s) 658
Bse8I GATNNNNATC 1 cut(s) 520
BseDI CCNNGG 9 cut(s) 9, 177, 306, 639, 688, 689, 895, 923, 1349
BseGI GGATG 1 cut(s) 321
BseJI GATNNNNATC 1 cut(s) 520
BseLI CCNNNNNNNGG 6 cut(s) 701, 841, 1275, 1354, 1355, 1381
BseMII CTCAG 2 cut(s) 740, 1427
BseNI ACTGG 1 cut(s) 658
BseRI GAGGAG 4 cut(s) 346, 364, 773, 854
BseXI GCAGC 1 cut(s) 750
BseYI CCCAGC 2 cut(s) 913, 1354
BsgI GTGCAG 1 cut(s) 962
Bsh1236I CGCG 2 cut(s) 1351, 1361
BshFI GGCC 4 cut(s) 182, 694, 1385, 1441
BsiHKAI GWGCWC 3 cut(s) 798, 850, 1242
BsiHKCI CYCGRG 1 cut(s) 688
BsiSI CCGG 3 cut(s) 689, 1154, 1185
BslI CCNNNNNNNGG 6 cut(s) 701, 841, 1275, 1354, 1355, 1381
BsmAI GTCTC 2 cut(s) 897, 1308
BsmBI CGTCTC 2 cut(s) 897, 1308
BsnI GGCC 4 cut(s) 182, 694, 1385, 1441
BsoBI CYCGRG 1 cut(s) 688
Bsp119I TTCGAA 1 cut(s) 1196
Bsp1286I GDGCHC 4 cut(s) 798, 850, 1151, 1242
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
Bsp19I CCATGG 1 cut(s) 177
BspANI GGCC 4 cut(s) 182, 694, 1385, 1441
BspCNI CTCAG 2 cut(s) 741, 1428
BspFNI CGCG 2 cut(s) 1351, 1361
BspHI TCATGA 1 cut(s) 1513
BspLI GGNNCC 3 cut(s) 7, 693, 1347
BspMI ACCTGC 1 cut(s) 984
BspPI GGATC 3 cut(s) 721, 1081, 1160
BspT104I TTCGAA 1 cut(s) 1196
BsrBI CCGCTC 2 cut(s) 318, 745
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 1 cut(s) 658
BssECI CCNNGG 9 cut(s) 9, 177, 306, 639, 688, 689, 895, 923, 1349
BssMI GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
BssNI GRCGYC 1 cut(s) 906
BssSI CACGAG 2 cut(s) 980, 1241
BssT1I CCWWGG 3 cut(s) 9, 177, 639
Bst2BI CACGAG 2 cut(s) 980, 1241
Bst4CI ACNGT 3 cut(s) 390, 1102, 1503
Bst6I CTCTTC 1 cut(s) 1374
BstACI GRCGYC 1 cut(s) 906
BstAPI GCANNNNNTGC 1 cut(s) 1062
BstAUI TGTACA 1 cut(s) 1212
BstBI TTCGAA 1 cut(s) 1196
BstC8I GCNNGC 5 cut(s) 117, 743, 1058, 1151, 1418
BstDEI CTNAG 2 cut(s) 749, 1436
BstDSI CCRYGG 4 cut(s) 177, 895, 923, 1349
BstENI CCTNNNNNAGG 1 cut(s) 1379
BstF5I GGATG 1 cut(s) 321
BstFNI CGCG 2 cut(s) 1351, 1361
BstHHI GCGC 2 cut(s) 992, 1361
BstKTI GATC 7 cut(s) 151, 524, 623, 729, 1076, 1168, 1233
BstMAI GTCTC 2 cut(s) 897, 1308
BstMBI GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
BstMWI GCNNNNNNNGC 2 cut(s) 914, 1062
BstSCI CCNGG 3 cut(s) 687, 688, 1153
BstSFI CTRYAG 1 cut(s) 1499
BstUI CGCG 2 cut(s) 1351, 1361
BstV1I GCAGC 1 cut(s) 750
BstV2I GAAGAC 2 cut(s) 210, 466
BstX2I RGATCY 2 cut(s) 620, 726
BstYI RGATCY 2 cut(s) 620, 726
BsuRI GGCC 4 cut(s) 182, 694, 1385, 1441
BtgI CCRYGG 4 cut(s) 177, 895, 923, 1349
BtgZI GCGATG 1 cut(s) 720
BtrI CACGTC 1 cut(s) 1210
BtsCI GGATG 1 cut(s) 321
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 1 cut(s) 917
BveI ACCTGC 1 cut(s) 984
Cac8I GCNNGC 5 cut(s) 117, 743, 1058, 1151, 1418
CciI TCATGA 1 cut(s) 1513
CfoI GCGC 2 cut(s) 992, 1361
Cfr13I GGNCC 3 cut(s) 559, 692, 1345
Cfr42I CCGCGG 1 cut(s) 1352
Cfr9I CCCGGG 1 cut(s) 688
CseI GACGC 3 cut(s) 914, 1409, 1441
Csp6I GTAC 3 cut(s) 673, 862, 1213
CviAII CATG 6 cut(s) 178, 493, 563, 1009, 1393, 1514
CviQI GTAC 3 cut(s) 673, 862, 1213
DdeI CTNAG 2 cut(s) 749, 1436
DpnI GATC 7 cut(s) 150, 523, 622, 728, 1075, 1167, 1232
DpnII GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
EaeI YGGCCR 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 1374
EarI CTCTTC 1 cut(s) 1374
EciI GGCGGA 4 cut(s) 451, 776, 915, 1349
Ecl136II GAGCTC 1 cut(s) 1240
Eco130I CCWWGG 3 cut(s) 9, 177, 639
Eco147I AGGCCT 1 cut(s) 1441
Eco24I GRGCYC 2 cut(s) 1151, 1242
Eco47I GGWCC 2 cut(s) 559, 1345
Eco53kI GAGCTC 1 cut(s) 1240
Eco88I CYCGRG 1 cut(s) 688
EcoICRI GAGCTC 1 cut(s) 1240
EcoNI CCTNNNNNAGG 1 cut(s) 1379
EcoO109I RGGNCCY 1 cut(s) 692
EcoT14I CCWWGG 3 cut(s) 9, 177, 639
EcoT38I GRGCYC 2 cut(s) 1151, 1242
ErhI CCWWGG 3 cut(s) 9, 177, 639
Esp3I CGTCTC 2 cut(s) 897, 1308
FaeI CATG 6 cut(s) 181, 496, 566, 1012, 1396, 1517
FaiI YATR 9 cut(s) 94, 136, 179, 494, 564, 1010, 1394, 1515, 1531
FatI CATG 6 cut(s) 177, 492, 562, 1008, 1392, 1513
FauI CCCGC 5 cut(s) 323, 569, 650, 1356, 1357
Fnu4HI GCNGC 7 cut(s) 465, 468, 739, 746, 1332, 1352, 1362
FokI GGATG 1 cut(s) 308
FriOI GRGCYC 2 cut(s) 1151, 1242
Fsp4HI GCNGC 7 cut(s) 465, 468, 739, 746, 1332, 1352, 1362
GlaI GCGC 2 cut(s) 991, 1360
GluI GCNGC 7 cut(s) 465, 468, 739, 746, 1332, 1352, 1362
GsaI CCCAGC 2 cut(s) 917, 1358
HaeIII GGCC 4 cut(s) 182, 694, 1385, 1441
HapII CCGG 3 cut(s) 689, 1154, 1185
HgaI GACGC 3 cut(s) 914, 1409, 1441
HhaI GCGC 2 cut(s) 992, 1361
Hin1I GRCGYC 1 cut(s) 906
Hin1II CATG 6 cut(s) 181, 496, 566, 1012, 1396, 1517
Hin6I GCGC 2 cut(s) 990, 1359
HinP1I GCGC 2 cut(s) 990, 1359
HincII GTYRAC 1 cut(s) 393
HindII GTYRAC 1 cut(s) 393
HindIII AAGCTT 2 cut(s) 113, 812
HinfI GANTC 6 cut(s) 14, 185, 516, 543, 751, 1188
HpaII CCGG 3 cut(s) 689, 1154, 1185
HphI GGTGA 4 cut(s) 143, 259, 655, 1419
Hpy166II GTNNAC 5 cut(s) 393, 673, 1006, 1213, 1345
Hpy188I TCNGA 8 cut(s) 162, 307, 515, 521, 829, 1073, 1181, 1270
Hpy188III TCNNGA 6 cut(s) 146, 1135, 1243, 1285, 1472, 1514
Hpy8I GTNNAC 5 cut(s) 393, 673, 1006, 1213, 1345
Hpy99I CGWCG 6 cut(s) 869, 1043, 1117, 1120, 1211, 1435
HpyAV CCTTC 6 cut(s) 183, 406, 411, 550, 958, 1452
HpyCH4III ACNGT 3 cut(s) 390, 1102, 1503
HpyCH4IV ACGT 3 cut(s) 864, 1209, 1412
HpyCH4V TGCA 2 cut(s) 979, 1056
HpyF10VI GCNNNNNNNGC 2 cut(s) 914, 1062
HpyF3I CTNAG 2 cut(s) 749, 1436
HpySE526I ACGT 3 cut(s) 864, 1209, 1412
Hsp92I GRCGYC 1 cut(s) 906
Hsp92II CATG 6 cut(s) 181, 496, 566, 1012, 1396, 1517
HspAI GCGC 2 cut(s) 990, 1359
KspI CCGCGG 1 cut(s) 1352
Kzo9I GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
LmnI GCTCC 4 cut(s) 323, 897, 1237, 1271
Lsp1109I GCAGC 1 cut(s) 750
LweI GCATC 2 cut(s) 497, 813
MaeII ACGT 3 cut(s) 864, 1209, 1412
MaeIII GTNAC 6 cut(s) 251, 442, 1157, 1243, 1425, 1503
MalI GATC 7 cut(s) 150, 523, 622, 728, 1075, 1167, 1232
MbiI CCGCTC 2 cut(s) 318, 745
MboI GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
MflI RGATCY 2 cut(s) 620, 726
MhlI GDGCHC 4 cut(s) 798, 850, 1151, 1242
MluCI AATT 4 cut(s) 238, 596, 697, 720
MlyI GAGTC 2 cut(s) 8, 760
MmeI TCCRAC 1 cut(s) 1129
MroXI GAANNNNTTC 2 cut(s) 1192, 1467
MseI TTAA 2 cut(s) 723, 762
MslI CAYNNNNRTG 1 cut(s) 922
MspA1I CMGCKG 1 cut(s) 1351
MspI CCGG 3 cut(s) 689, 1154, 1185
MspR9I CCNGG 3 cut(s) 689, 690, 1155
MvnI CGCG 2 cut(s) 1351, 1361
MwoI GCNNNNNNNGC 2 cut(s) 914, 1062
NciI CCSGG 3 cut(s) 689, 690, 1155
NcoI CCATGG 1 cut(s) 177
NdeII GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
NlaIII CATG 6 cut(s) 181, 496, 566, 1012, 1396, 1517
NlaIV GGNNCC 3 cut(s) 7, 693, 1347
NmuCI GTSAC 4 cut(s) 442, 1243, 1425, 1503
NspV TTCGAA 1 cut(s) 1196
OliI CACNNNNGTG 1 cut(s) 922
PagI TCATGA 1 cut(s) 1513
PceI AGGCCT 1 cut(s) 1441
PcsI WCGNNNNNNNCGW 1 cut(s) 1490
PdmI GAANNNNTTC 2 cut(s) 1192, 1467
PfeI GAWTC 4 cut(s) 185, 516, 543, 1188
PkrI GCNGC 7 cut(s) 466, 469, 740, 747, 1333, 1353, 1363
PleI GAGTC 2 cut(s) 8, 759
PpsI GAGTC 2 cut(s) 8, 759
Psp124BI GAGCTC 1 cut(s) 1242
PspFI CCCAGC 2 cut(s) 913, 1354
PspN4I GGNNCC 3 cut(s) 7, 693, 1347
PspPI GGNCC 3 cut(s) 559, 692, 1345
PsuI RGATCY 2 cut(s) 620, 726
RsaI GTAC 3 cut(s) 674, 863, 1214
RsaNI GTAC 3 cut(s) 673, 862, 1213
RseI CAYNNNNRTG 1 cut(s) 922
SacI GAGCTC 1 cut(s) 1242
SacII CCGCGG 1 cut(s) 1352
SaqAI TTAA 2 cut(s) 723, 762
SatI GCNGC 7 cut(s) 465, 468, 739, 746, 1332, 1352, 1362
Sau3AI GATC 7 cut(s) 148, 521, 620, 726, 1073, 1165, 1230
Sau96I GGNCC 3 cut(s) 559, 692, 1345
SchI GAGTC 2 cut(s) 8, 760
ScrFI CCNGG 3 cut(s) 689, 690, 1155
SduI GDGCHC 4 cut(s) 798, 850, 1151, 1242
SfaNI GCATC 2 cut(s) 497, 813
SfcI CTRYAG 1 cut(s) 1499
Sfr303I CCGCGG 1 cut(s) 1352
SfuI TTCGAA 1 cut(s) 1196
SgrBI CCGCGG 1 cut(s) 1352
SinI GGWCC 2 cut(s) 559, 1345
SmaI CCCGGG 1 cut(s) 690
SmiMI CAYNNNNRTG 1 cut(s) 922
SmlI CTYRAG 1 cut(s) 791
SmoI CTYRAG 1 cut(s) 791
Sse9I AATT 4 cut(s) 238, 596, 697, 720
SseBI AGGCCT 1 cut(s) 1441
SspI AATATT 2 cut(s) 34, 1458
SstI GAGCTC 1 cut(s) 1242
StuI AGGCCT 1 cut(s) 1441
StyD4I CCNGG 3 cut(s) 687, 688, 1153
StyI CCWWGG 3 cut(s) 9, 177, 639
TaaI ACNGT 3 cut(s) 390, 1102, 1503
TaiI ACGT 3 cut(s) 867, 1212, 1415
TaqI TCGA 8 cut(s) 145, 195, 774, 858, 1038, 1118, 1196, 1377
TasI AATT 4 cut(s) 238, 596, 697, 720
TatI WGTACW 2 cut(s) 672, 1212
TauI GCSGC 6 cut(s) 467, 470, 748, 1334, 1354, 1364
TfiI GAWTC 4 cut(s) 185, 516, 543, 1188
Tru1I TTAA 2 cut(s) 723, 762
Tru9I TTAA 2 cut(s) 723, 762
TscAI CASTG 1 cut(s) 924
TseFI GTSAC 4 cut(s) 442, 1243, 1425, 1503
TseI GCWGC 1 cut(s) 738
Tsp45I GTSAC 4 cut(s) 442, 1243, 1425, 1503
TspDTI ATGAA 2 cut(s) 119, 125
TspGWI ACGGA 1 cut(s) 888
TspMI CCCGGG 1 cut(s) 688
TspRI CASTG 1 cut(s) 924
VpaK11BI GGWCC 2 cut(s) 559, 1345
XagI CCTNNNNNAGG 1 cut(s) 1379
XcmI CCANNNNNNNNNTGG 1 cut(s) 921
XmaI CCCGGG 1 cut(s) 688
XmnI GAANNNNTTC 2 cut(s) 1192, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.