pycom06g20170

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
23318462 .. 23324297
5836 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g20170.1

Sequence Viewer

Length: 3039 bp
ATGAAGAACCTTATTAAGAAACTGCATAACATGTCCAACCAATCAAAAGATTCAGAAGGGTCTGCAGCTTCATCAAGGGGCAGTAAGTCCATTAGCAAGTCGTCCTCTGAAAGGGAAAGGCTTTTGCACTCAAGGTCCCATCCAGGTTCTGAGCATAAACCCTTTTCGGGGATTTCGGGTTGGTTGAATTCAGTTGGCAATAGGCATACCCCTAGTCCCCCATCATCTTCAAATGTCAATAGGGCCGAGAGAATGGAGCAGCCACCTGATGCAGCTGTTAGTGGGAGTGGTTTAGATGTTGTTTCCGATACAGGTAGGCGCGATTCGGGGTCTAGTACCTCAAGGGATGCTGATATAACAGAAGAGTATCAGATTCAATTGGCTTTGGAATTGAGTGCTAGGGAAGATCCAGAGGCAGTTCAGATTGAGGCTGTTAAGCAGATTAGCTTGGGGTCTAGTGCTCCTGATAATACTCCAGCTGAAGTTATAGCATACCGCTATTGGAATTACAATGCTCTTAGCTATGATGACAAGGTCGTGGATGGGTTCTATGATCTGTATGGAATATTGATGGAGTCAACCTCAGAAAGAATGCCTTCCCTTGTTGATCTGCAAGGAGCACCTTTGTCAGATAGTGTCGCCTGGGAAGCAGTTTTGGTCAATCGAGCTGCTGATGCAAATTTGTTGAAACTTGAACAGGTGGCCCTAGAATTGGCTGTAAAGTCAAGTTCAGATCCTCTGGTTTTTGTAAACAGCAATCTGGTGCGAGAACTTGCTCTTTTAGTTGCTGACTACATGGGTGGACCAGTTGCGAATCCTGAAAACATGTTGAGAGAATGGCAAAATCTTAGTTACAGTTTGAAAGCAAACATTGGTAGCATGGTTTTGCCACTGGGTTCTCTGAGGATTGGATTAGCTCGACATCGTGCATTGTTGTTCAAGGTTTTGGCTGATAGTGTGAGCATCCCATGCCGGTTGGTGAAAGGACAACAATACACGGGGTCCAGTGATGTTGCAATGAACTTTGTAAAAATTGATGATAGGGAGTATATTGTTGATCTGATGGCAGACCCCGGCACACTTATTCCATCTGATGAAGCTCGATCACATATAGAATATGACGAATCTTACTTTTCCGCCAGTCCTTTGTCTAGAGACATTGATTCCTCTCATGTTGCTTCTTCCAGTAGTGGAGTTGGGAGTTCGTATGAAGAACATTCGGACTTTGGAACATTAGAGAAGAAATCCAGGTTAAGAAATTTTGCTTCTTCCACAAGGGATTCCGAAGAGAGAGACAAACCAGTTTCTCGTGCAAATTTACCCAGACCAACTGAATGCGAGGAACAACCCAAGATGCCTTCAGATGAATTTAGATATGCCTCTGATGTAGAAAAGATGCTGGTGCAGGAACTTCCAGGAAAGCCAAATTATCCTTTTGCGCATGCAAGATCCCCTTCATGGACTGAAGGTGTTAGCTCTCCAGCCGTTCATAAAAAGAAGGTTAAGGACGTTTCCAAATACATGATTGTGGCTGCCAAGGAGAATCCAAATCTAGTTCAAAAGCTTCATGATGTTTTACGTGAAAGTGGAGTTGTTGCTCCCCCGAACCTGTTTAGGGAAATATATCCAGAGGAGTTAGATGTGTCAACAGTTGAGACCAAGCACCAGGCAGAAGATAAGAGCGAACATAAAGAAAGGTTTGGAACACAAAAAGCTATAAGTCAAGATGATAAAAGGCCAGCTCACTCTCTGCCTCCTTTGCCTCAGCAAAGGGTGAATCTTAAAGCTAGTACTTCCGGTCAACCAGAGATTCTTAAGCCTGTGGAAGGTTTAGGGGTCAGCCTTCCACTTGATACGAGGGAAGTGGCTGGCCAGAATATCTCATCACAGCCTGAAGCATCTCCAGTTAAACATACAAAGAATGTCCCTGTTGCTGCAGCAGCAGCGGCTGCAGCAGCTGTTGTTGCATCGTCTATGGTAGTTGCTGCAGCAAAGTCAAGTACTGACCCAACTCTCGAACTTCCTGTGGCGGCTGCTGCCACTGCTACTGCTGCAGCTGTGGTTGCAACAACTGCAGCTGTCAATAAGCAATATGAGCAGGGTATGAGAAGTGATGGAGATGCAGAAAGTGGTGGTTTTGAACCAAGGGGCAGTGGTGGCCGTGAACATGATGCTTTGGGAGTTAGTTCAGAAGGCGAGCGAACATCAGATCGATCGGCAGGTAATGAAAGCACTAGATCTGACGTCACAATTGATGATGTTGCAGACTGCGAGATTCCCTTTGAGGATATCATCTTGGGTGAACGATCGTATGGGGAGGTCTATCATGGAGACTGGCATGGGACTGAGGTTGCTGTGAAGAGGTTTCTAGACCAAAAGATTTTGGGCGAATCACTTGATGAATTCAGAAGTGAGGTTCGGATAATGAAAAGAGTCAGGCATCCTAATGTTGTTCTCTTCATGGGTGCAATAACTCGCCCTCCAAATCTTTCCATTGTTACAGAATTTCTTCCAAGAGGTAGTTTATACAGGTTATTACACCGGCCTAACAATCAATTAGATGAGCGAAGGCGCTTGAGGATGGCTCTTGATGCAGCTCGCGGAATGAATTACTTGCATAACTGCACTCCAGTCATTGTGCACCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAATTGGGTTGTGAAGGTCTGCGATTTTGGATTATCACGAATGAAGAACAGCACATTTCTCTCATCAAGGTCGACTGCAGGGACGGCTGAATGGATGGCTCCGGAAGTGCTACGAAATGAACCTTCCGATGAAAAATGTGATGTTTATAGCTACGGGGTCATATTATGGGAGCTCTCTACGATGCAACAGCCATGGGGGGGAATGAACCCGATGCAAGTTGTTGGTGCAGTTGGATTTCAACATCGCCGTCTTGATATTCCAGATAATATAGATCCTGCAGTTGCAGATCTCATTAGAAAATGCTGGCAAACAGATCCAAAATTGAGACCGTCGTTTGCTAGGAGATCATGGCTACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0035556 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1013

Amino Acids

111.12

Weight (kDa)

5.7

Isoelectric Point (pI)

51.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 160 - 362 2.9e-74 EDR1/CTR1/ARMC3, peptidase-like
Pkinase PF00069 765 - 1006 5.3e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 766 - 1006 3.7e-63 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2247
Acc16I TGCGCA 1 cut(s) 1440
Acc36I ACCTGC 1 cut(s) 2210
AccI GTMKAC 1 cut(s) 2750
AccII CGCG 2 cut(s) 321, 2601
AccIII TCCGGA 1 cut(s) 2779
AciI CCGC 5 cut(s) 496, 1137, 1946, 2030, 2601
AclWI GGATC 5 cut(s) 401, 728, 1443, 2945, 2987
AcoI YGGCCR 2 cut(s) 1870, 2158
AcsI RAATTY 7 cut(s) 187, 679, 1258, 1315, 1367, 2402, 2504
AcuI CTGAAG 4 cut(s) 501, 1344, 1485, 1914
AcyI GRCGYC 1 cut(s) 2244
AfaI GTAC 3 cut(s) 337, 1792, 2002
AfiI CCNNNNNNNGG 8 cut(s) 111, 167, 168, 712, 1458, 1615, 1826, 2876
AflII CTTAAG 1 cut(s) 1814
AflIII ACRYGT 2 cut(s) 30, 825
AjnI CCWGG 5 cut(s) 142, 641, 1247, 1414, 1665
Alw21I GWGCWC 4 cut(s) 463, 622, 2643, 2853
Alw26I GTCTC 6 cut(s) 1149, 1287, 1649, 2325, 2661, 2998
Alw44I GTGCAC 1 cut(s) 2639
AlwI GGATC 5 cut(s) 401, 728, 1443, 2945, 2987
AlwNI CAGNNNCTG 3 cut(s) 149, 1949, 1958
Aor13HI TCCGGA 1 cut(s) 2779
AoxI GGCC 6 cut(s) 243, 702, 1736, 1870, 2158, 2543
ApaLI GTGCAC 1 cut(s) 2639
ApoI RAATTY 7 cut(s) 187, 679, 1258, 1315, 1367, 2402, 2504
Asp700I GAANNNNTTC 2 cut(s) 595, 2508
AspLEI GCGC 3 cut(s) 321, 1441, 2574
AspS9I GGNCC 5 cut(s) 135, 243, 703, 803, 1002
AsuC2I CCSGG 1 cut(s) 1074
AsuHPI GGTGA 3 cut(s) 991, 1786, 2312
AvaII GGWCC 3 cut(s) 135, 803, 1002
BaeGI GKGCMC 1 cut(s) 2643
BalI TGGCCA 1 cut(s) 1872
BanII GRGCYC 1 cut(s) 2853
BauI CACGAG 1 cut(s) 1308
Bbv12I GWGCWC 4 cut(s) 463, 622, 2643, 2853
BbvCI CCTCAGC 1 cut(s) 1764
BccI CCATC 9 cut(s) 147, 229, 536, 565, 1057, 1096, 2108, 2575, 2767
BceAI ACGGC 4 cut(s) 1469, 2145, 2778, 2910
BciT130I CCWGG 5 cut(s) 144, 643, 1249, 1416, 1667
BcnI CCSGG 1 cut(s) 1074
BcoDI GTCTC 6 cut(s) 1149, 1287, 1649, 2325, 2661, 2998
BfmI CTRYAG 8 cut(s) 63, 1935, 1950, 1986, 2052, 2073, 2754, 2955
BfoI RGCGCY 1 cut(s) 2575
BfrI CTTAAG 1 cut(s) 1814
BfuAI ACCTGC 1 cut(s) 2210
BglII AGATCT 2 cut(s) 2237, 2965
BmcAI AGTACT 2 cut(s) 1792, 2002
Bme1390I CCNGG 6 cut(s) 144, 643, 1074, 1249, 1416, 1667
Bme18I GGWCC 3 cut(s) 135, 803, 1002
BmgT120I GGNCC 5 cut(s) 135, 243, 703, 803, 1002
BmiI GGNNCC 3 cut(s) 137, 1003, 2778
BmrFI CCNGG 6 cut(s) 144, 643, 1074, 1249, 1416, 1667
BmrI ACTGGG 1 cut(s) 902
BmuI ACTGGG 1 cut(s) 902
BplI GAGNNNNNCTC 4 cut(s) 566, 598, 2569, 2601
BpmI CTGGAG 4 cut(s) 459, 1464, 1887, 2613
Bpu10I CCTNAGC 1 cut(s) 1764
BpuEI CTTGAG 3 cut(s) 115, 325, 2596
BpuMI CCSGG 1 cut(s) 1074
Bsa29I ATCGAT 1 cut(s) 2212
BsaAI YACGTR 1 cut(s) 1580
BsaHI GRCGYC 1 cut(s) 2244
BsaI GGTCTC 2 cut(s) 1649, 2998
BsaJI CCNNGG 5 cut(s) 642, 1072, 1536, 2144, 2870
BsaWI WCCGGW 2 cut(s) 1796, 2779
BsaXI ACNNNNNCTCC 2 cut(s) 2464, 2494
Bsc4I CCNNNNNNNGG 8 cut(s) 111, 167, 168, 712, 1458, 1615, 1826, 2876
Bse118I RCCGGY 2 cut(s) 972, 2541
Bse1I ACTGG 9 cut(s) 806, 897, 1005, 1140, 1185, 1301, 1904, 2339, 2630
Bse3DI GCAATG 1 cut(s) 1023
BseAI TCCGGA 1 cut(s) 2779
BseBI CCWGG 5 cut(s) 144, 643, 1249, 1416, 1667
BseCI ATCGAT 1 cut(s) 2212
BseDI CCNNGG 5 cut(s) 642, 1072, 1536, 2144, 2870
BseGI GGATG 7 cut(s) 139, 352, 547, 963, 2440, 2586, 2778
BseLI CCNNNNNNNGG 8 cut(s) 111, 167, 168, 712, 1458, 1615, 1826, 2876
BseMI GCAATG 1 cut(s) 1023
BseMII CTCAG 5 cut(s) 141, 597, 893, 1778, 2337
BseNI ACTGG 9 cut(s) 806, 897, 1005, 1140, 1185, 1301, 1904, 2339, 2630
BseRI GAGGAG 1 cut(s) 1646
BseSI GKGCMC 1 cut(s) 2643
BsgI GTGCAG 3 cut(s) 1424, 2608, 2925
Bsh1236I CGCG 2 cut(s) 321, 2601
Bsh1285I CGRYCG 2 cut(s) 2216, 2309
BshFI GGCC 6 cut(s) 245, 704, 1738, 1872, 2160, 2545
BshVI ATCGAT 1 cut(s) 2212
BsiEI CGRYCG 2 cut(s) 2216, 2309
BsiHKAI GWGCWC 4 cut(s) 463, 622, 2643, 2853
BsiSI CCGG 5 cut(s) 973, 1074, 1797, 2542, 2780
BslFI GGGAC 5 cut(s) 121, 201, 1910, 2356, 2773
BslI CCNNNNNNNGG 8 cut(s) 111, 167, 168, 712, 1458, 1615, 1826, 2876
BsmAI GTCTC 6 cut(s) 1149, 1287, 1649, 2325, 2661, 2998
BsmFI GGGAC 5 cut(s) 121, 201, 1910, 2356, 2773
BsmI GAATGC 2 cut(s) 597, 1340
BsnI GGCC 6 cut(s) 245, 704, 1738, 1872, 2160, 2545
Bso31I GGTCTC 2 cut(s) 1649, 2998
Bsp1286I GDGCHC 4 cut(s) 463, 622, 2643, 2853
Bsp13I TCCGGA 1 cut(s) 2779
Bsp19I CCATGG 1 cut(s) 2870
BspACI CCGC 5 cut(s) 496, 1137, 1946, 2030, 2601
BspANI GGCC 6 cut(s) 245, 704, 1738, 1872, 2160, 2545
BspCNI CTCAG 5 cut(s) 142, 596, 894, 1777, 2338
BspDI ATCGAT 1 cut(s) 2212
BspEI TCCGGA 1 cut(s) 2779
BspFNI CGCG 2 cut(s) 321, 2601
BspHI TCATGA 1 cut(s) 1567
BspLI GGNNCC 3 cut(s) 137, 1003, 2778
BspMAI CTGCAG 8 cut(s) 67, 1939, 1954, 1990, 2056, 2077, 2758, 2959
BspMI ACCTGC 1 cut(s) 2210
BspPI GGATC 5 cut(s) 401, 728, 1443, 2945, 2987
BspTI CTTAAG 1 cut(s) 1814
BspTNI GGTCTC 2 cut(s) 1649, 2998
BsrDI GCAATG 1 cut(s) 1023
BsrFI RCCGGY 2 cut(s) 972, 2541
BsrI ACTGG 9 cut(s) 806, 897, 1005, 1140, 1185, 1301, 1904, 2339, 2630
BssAI RCCGGY 2 cut(s) 972, 2541
BssECI CCNNGG 5 cut(s) 642, 1072, 1536, 2144, 2870
BssNI GRCGYC 1 cut(s) 2244
BssSI CACGAG 1 cut(s) 1308
BssT1I CCWWGG 3 cut(s) 1536, 2144, 2870
Bst2BI CACGAG 1 cut(s) 1308
Bst2UI CCWGG 5 cut(s) 144, 643, 1249, 1416, 1667
Bst4CI ACNGT 4 cut(s) 857, 1651, 2645, 3009
Bst6I CTCTTC 4 cut(s) 357, 1281, 2354, 2462
BstACI GRCGYC 1 cut(s) 2244
BstAFI CTTAAG 1 cut(s) 1814
BstAPI GCANNNNNTGC 3 cut(s) 969, 1949, 2072
BstBAI YACGTR 1 cut(s) 1580
BstC8I GCNNGC 6 cut(s) 1443, 1740, 1870, 2198, 2599, 2984
BstDEI CTNAG 7 cut(s) 150, 518, 583, 848, 902, 1764, 2346
BstDSI CCRYGG 1 cut(s) 2870
BstENI CCTNNNNNAGG 2 cut(s) 109, 1824
BstF5I GGATG 7 cut(s) 139, 352, 547, 963, 2440, 2586, 2778
BstFNI CGCG 2 cut(s) 321, 2601
BstH2I RGCGCY 1 cut(s) 2575
BstHHI GCGC 3 cut(s) 321, 1441, 2574
BstMAI GTCTC 6 cut(s) 1149, 1287, 1649, 2325, 2661, 2998
BstMCI CGRYCG 2 cut(s) 2216, 2309
BstNI CCWGG 5 cut(s) 144, 643, 1249, 1416, 1667
BstNSI RCATGY 3 cut(s) 34, 829, 1445
BstSCI CCNGG 6 cut(s) 142, 641, 1072, 1247, 1414, 1665
BstSFI CTRYAG 8 cut(s) 63, 1935, 1950, 1986, 2052, 2073, 2754, 2955
BstSLI GKGCMC 1 cut(s) 2643
BstUI CGCG 2 cut(s) 321, 2601
BstX2I RGATCY 7 cut(s) 406, 733, 1448, 2237, 2950, 2965, 2992
BstYI RGATCY 7 cut(s) 406, 733, 1448, 2237, 2950, 2965, 2992
Bsu15I ATCGAT 1 cut(s) 2212
BsuRI GGCC 6 cut(s) 245, 704, 1738, 1872, 2160, 2545
BsuTUI ATCGAT 1 cut(s) 2212
BtgI CCRYGG 1 cut(s) 2870
BtgZI GCGATG 1 cut(s) 2906
BtsCI GGATG 7 cut(s) 139, 352, 547, 963, 2440, 2586, 2778
BtsI GCAGTG 2 cut(s) 2040, 2158
BtsIMutI CAGTG 4 cut(s) 890, 1012, 2040, 2158
BveI ACCTGC 1 cut(s) 2210
Cac8I GCNNGC 6 cut(s) 1443, 1740, 1870, 2198, 2599, 2984
CaiI CAGNNNCTG 3 cut(s) 149, 1949, 1958
CciI TCATGA 1 cut(s) 1567
CfoI GCGC 3 cut(s) 321, 1441, 2574
Cfr10I RCCGGY 2 cut(s) 972, 2541
Cfr13I GGNCC 5 cut(s) 135, 243, 703, 803, 1002
ClaI ATCGAT 1 cut(s) 2212
Csp6I GTAC 3 cut(s) 336, 1791, 2001
CviQI GTAC 3 cut(s) 336, 1791, 2001
DdeI CTNAG 7 cut(s) 150, 518, 583, 848, 902, 1764, 2346
EaeI YGGCCR 2 cut(s) 1870, 2158
Eam1104I CTCTTC 4 cut(s) 357, 1281, 2354, 2462
EarI CTCTTC 4 cut(s) 357, 1281, 2354, 2462
EciI GGCGGA 1 cut(s) 1126
Ecl136II GAGCTC 1 cut(s) 2851
Eco130I CCWWGG 3 cut(s) 1536, 2144, 2870
Eco24I GRGCYC 1 cut(s) 2853
Eco31I GGTCTC 2 cut(s) 1649, 2998
Eco32I GATATC 1 cut(s) 2290
Eco47I GGWCC 3 cut(s) 135, 803, 1002
Eco53kI GAGCTC 1 cut(s) 2851
Eco57I CTGAAG 4 cut(s) 501, 1344, 1485, 1914
EcoICRI GAGCTC 1 cut(s) 2851
EcoNI CCTNNNNNAGG 2 cut(s) 109, 1824
EcoO109I RGGNCCY 1 cut(s) 135
EcoRI GAATTC 2 cut(s) 187, 2402
EcoRII CCWGG 5 cut(s) 142, 641, 1247, 1414, 1665
EcoRV GATATC 1 cut(s) 2290
EcoT14I CCWWGG 3 cut(s) 1536, 2144, 2870
EcoT38I GRGCYC 1 cut(s) 2853
ErhI CCWWGG 3 cut(s) 1536, 2144, 2870
FalI AAGNNNNNCTT 4 cut(s) 580, 612, 1438, 1470
FaqI GGGAC 5 cut(s) 121, 201, 1910, 2356, 2773
FblI GTMKAC 1 cut(s) 2750
FokI GGATG 7 cut(s) 126, 359, 554, 950, 2427, 2593, 2785
FriOI GRGCYC 1 cut(s) 2853
FspI TGCGCA 1 cut(s) 1440
GlaI GCGC 3 cut(s) 320, 1440, 2573
GsuI CTGGAG 4 cut(s) 459, 1464, 1887, 2613
HaeII RGCGCY 1 cut(s) 2575
HaeIII GGCC 6 cut(s) 245, 704, 1738, 1872, 2160, 2545
HapII CCGG 5 cut(s) 973, 1074, 1797, 2542, 2780
HhaI GCGC 3 cut(s) 321, 1441, 2574
Hin1I GRCGYC 1 cut(s) 2244
Hin6I GCGC 3 cut(s) 319, 1439, 2572
HinP1I GCGC 3 cut(s) 319, 1439, 2572
HincII GTYRAC 5 cut(s) 579, 1647, 1802, 2674, 2751
HindII GTYRAC 5 cut(s) 579, 1647, 1802, 2674, 2751
HindIII AAGCTT 1 cut(s) 1562
HpaII CCGG 5 cut(s) 973, 1074, 1797, 2542, 2780
HphI GGTGA 3 cut(s) 991, 1786, 2312
Hpy99I CGWCG 1 cut(s) 3013
HpyCH4III ACNGT 4 cut(s) 857, 1651, 2645, 3009
HpyCH4IV ACGT 3 cut(s) 1509, 1579, 2244
HpyF3I CTNAG 7 cut(s) 150, 518, 583, 848, 902, 1764, 2346
HpySE526I ACGT 3 cut(s) 1509, 1579, 2244
Hsp92I GRCGYC 1 cut(s) 2244
HspAI GCGC 3 cut(s) 319, 1439, 2572
Kpn2I TCCGGA 1 cut(s) 2779
LmnI GCTCC 6 cut(s) 256, 466, 617, 1603, 2782, 2848
MaeII ACGT 3 cut(s) 1509, 1579, 2244
MaeIII GTNAC 3 cut(s) 851, 2245, 2497
MfeI CAATTG 2 cut(s) 377, 2250
MflI RGATCY 7 cut(s) 406, 733, 1448, 2237, 2950, 2965, 2992
MhlI GDGCHC 4 cut(s) 463, 622, 2643, 2853
MlsI TGGCCA 1 cut(s) 1872
MluNI TGGCCA 1 cut(s) 1872
MlyI GAGTC 2 cut(s) 584, 2442
MmeI TCCRAC 2 cut(s) 60, 2890
Mox20I TGGCCA 1 cut(s) 1872
MroI TCCGGA 1 cut(s) 2779
MroXI GAANNNNTTC 2 cut(s) 595, 2508
MscI TGGCCA 1 cut(s) 1872
MseI TTAA 7 cut(s) 15, 435, 1253, 1503, 1782, 1815, 1908
MslI CAYNNNNRTG 2 cut(s) 1526, 2445
Msp20I TGGCCA 1 cut(s) 1872
MspA1I CMGCKG 6 cut(s) 275, 479, 1946, 1958, 2057, 2078
MspCI CTTAAG 1 cut(s) 1814
MspI CCGG 5 cut(s) 973, 1074, 1797, 2542, 2780
MspR9I CCNGG 6 cut(s) 144, 643, 1074, 1249, 1416, 1667
MunI CAATTG 2 cut(s) 377, 2250
Mva1269I GAATGC 2 cut(s) 597, 1340
MvaI CCWGG 5 cut(s) 144, 643, 1249, 1416, 1667
MvnI CGCG 2 cut(s) 321, 2601
NciI CCSGG 1 cut(s) 1074
NcoI CCATGG 1 cut(s) 2870
NlaIV GGNNCC 3 cut(s) 137, 1003, 2778
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 1 cut(s) 2245
NsbI TGCGCA 1 cut(s) 1440
NspI RCATGY 3 cut(s) 34, 829, 1445
PaeI GCATGC 1 cut(s) 1445
PagI TCATGA 1 cut(s) 1567
PciI ACATGT 2 cut(s) 30, 825
PctI GAATGC 2 cut(s) 597, 1340
PdmI GAANNNNTTC 2 cut(s) 595, 2508
PflFI GACNNNGTC 1 cut(s) 533
PfoI TCCNGGA 1 cut(s) 1414
Ple19I CGATCG 2 cut(s) 2216, 2309
PleI GAGTC 2 cut(s) 583, 2441
PpsI GAGTC 2 cut(s) 583, 2441
Ppu21I YACGTR 1 cut(s) 1580
PpuMI RGGWCCY 1 cut(s) 135
PscI ACATGT 2 cut(s) 30, 825
Psp124BI GAGCTC 1 cut(s) 2853
Psp5II RGGWCCY 1 cut(s) 135
Psp6I CCWGG 5 cut(s) 142, 641, 1247, 1414, 1665
PspGI CCWGG 5 cut(s) 142, 641, 1247, 1414, 1665
PspN4I GGNNCC 3 cut(s) 137, 1003, 2778
PspPI GGNCC 5 cut(s) 135, 243, 703, 803, 1002
PspPPI RGGWCCY 1 cut(s) 135
PstI CTGCAG 8 cut(s) 67, 1939, 1954, 1990, 2056, 2077, 2758, 2959
PstNI CAGNNNCTG 3 cut(s) 149, 1949, 1958
PsuI RGATCY 7 cut(s) 406, 733, 1448, 2237, 2950, 2965, 2992
PsyI GACNNNGTC 1 cut(s) 533
PvuI CGATCG 2 cut(s) 2216, 2309
PvuII CAGCTG 5 cut(s) 275, 479, 1958, 2057, 2078
RsaI GTAC 3 cut(s) 337, 1792, 2002
RsaNI GTAC 3 cut(s) 336, 1791, 2001
RseI CAYNNNNRTG 2 cut(s) 1526, 2445
SacI GAGCTC 1 cut(s) 2853
SalI GTCGAC 1 cut(s) 2749
SaqAI TTAA 7 cut(s) 15, 435, 1253, 1503, 1782, 1815, 1908
Sau96I GGNCC 5 cut(s) 135, 243, 703, 803, 1002
ScaI AGTACT 2 cut(s) 1792, 2002
SchI GAGTC 2 cut(s) 584, 2442
ScrFI CCNGG 6 cut(s) 144, 643, 1074, 1249, 1416, 1667
SduI GDGCHC 4 cut(s) 463, 622, 2643, 2853
SfcI CTRYAG 8 cut(s) 63, 1935, 1950, 1986, 2052, 2073, 2754, 2955
SinI GGWCC 3 cut(s) 135, 803, 1002
SmiMI CAYNNNNRTG 2 cut(s) 1526, 2445
SmlI CTYRAG 4 cut(s) 130, 340, 1814, 2575
SmoI CTYRAG 4 cut(s) 130, 340, 1814, 2575
SphI GCATGC 1 cut(s) 1445
SsiI CCGC 5 cut(s) 496, 1137, 1946, 2030, 2601
SspI AATATT 1 cut(s) 567
SstI GAGCTC 1 cut(s) 2853
StyD4I CCNGG 6 cut(s) 142, 641, 1072, 1247, 1414, 1665
StyI CCWWGG 3 cut(s) 1536, 2144, 2870
TaaI ACNGT 4 cut(s) 857, 1651, 2645, 3009
TaiI ACGT 3 cut(s) 1512, 1582, 2247
TaqI TCGA 6 cut(s) 664, 919, 1102, 2016, 2212, 2750
TatI WGTACW 2 cut(s) 1790, 2000
TauI GCSGC 2 cut(s) 1949, 2033
Tru1I TTAA 7 cut(s) 15, 435, 1253, 1503, 1782, 1815, 1908
Tru9I TTAA 7 cut(s) 15, 435, 1253, 1503, 1782, 1815, 1908
TscAI CASTG 4 cut(s) 897, 1012, 2047, 2158
TseFI GTSAC 1 cut(s) 2245
Tsp45I GTSAC 1 cut(s) 2245
TspRI CASTG 4 cut(s) 897, 1012, 2047, 2158
Tth111I GACNNNGTC 1 cut(s) 533
Vha464I CTTAAG 1 cut(s) 1814
VneI GTGCAC 1 cut(s) 2639
VpaK11BI GGWCC 3 cut(s) 135, 803, 1002
XagI CCTNNNNNAGG 2 cut(s) 109, 1824
XapI RAATTY 7 cut(s) 187, 679, 1258, 1315, 1367, 2402, 2504
XbaI TCTAGA 2 cut(s) 1151, 2368
XceI RCATGY 3 cut(s) 34, 829, 1445
XmiI GTMKAC 1 cut(s) 2750
XmnI GAANNNNTTC 2 cut(s) 595, 2508
ZraI GACGTC 1 cut(s) 2245
ZrmI AGTACT 2 cut(s) 1792, 2002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.