Rh7DG017000

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0010425
Physical Location & Seq
Forward (+)
1395188 .. 1402262
7075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG017000.1

Sequence Viewer

Length: 3084 bp
ATGAAGAACCTTCTTAAGAAGCTCCATATCATGTCCAACCAATCAGAAGATTCAGCAGAGGGGTCTACTTCATCAAAGAGCAGCACTAAGGCTATTGATAAGTCGTCTTCCGAGACTGAGACGCTTTTGCACTCAAGGTCCCAGCAGAGTTCTGAGCATAAACACTTGTCTGGGATATCAGGTTGGCTCAATTCAGTGGCTAATAGAAAGAGCCCCAGTCCCCCATCATCTTCAAATGTTATGAGGGGGGAGAGAATTGAGCAACCTGAAGCAGGTAGTAGGAGTGGTGGGGATGTTGTTTCGGATACAGCTAGGCGTGATTCGGGGTCTAGTACTTCAAGGGATGCTGATATAATGGAGGAGTATCAGATTCAACTGGCTTTGGAGTTGAGTGCTAGGGAGGATCCAGAGGCAGTTCAGATTGAGGCTGTTAAGCAGATTAGCTTAGGCTCTTGTGCTCCGGATAATACTCCGGCTGAAGTTATTGCCTATCGTTATTGGAATTACAATGCTCTTAGCTATGATGATAAGATCATGGATGGTTTCTATGACCTGTATGGAATATTGACGGAGTCAACCTCAGAAAGAATGCCTTCCCTTGTTGATCTGCAAGGAACAGCTGTCTCAGATAATGTCAACTGGGAAGCAGTTTTGGTCAATAGAGCTGCCGATGCGAATTTATTGAAACTTGAACAGATGGCCCTAGAAATGGCTGTAAAGTCACGTTCAGATCTTCGGGTTACCGTAAACAGAAATTTGGTGCGAAAACTTGCTCTTTTAGTTGCTAACTCTATGGGTGGACCAGTTGCAAATCCTTACAACATGTTGAAGGCATGGCAAAATCTTAGCCAGAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACAATTGGATTAGCTCGGCATCGTGCATTGTTGTTCAAGGCTTTGGCTGATAGTGTTGGCATCCCATGCCGATTGGTGAAAGGACAACAATACACGGGTTCCAATGATGTAGCAATGAACTTTGTAAAGATTGATGATGGAAGGGAGTATATTGTTGATCTGATGGCTGACCCCGGCACACTTATTCCATCTGATGAAGCTGGATCACATATAGAATATGATGAACCTTACTTTTCTGCCAGTCCTTTGTCTAGAGACATTGACTCTTCTCATGTAGCCTCTTCCAGTAGTGGAATTGGGAGTTCATTTGAAGAACATTCAGACTTTGGGACATTAGACAAAAAATCCAGGTTAAGAAATTATAGTTCTGCAGACAGGGAATCTGAAGAGACAGAAGCCACGTATTTTCGTGAAAATTTACCCAGACCAACTGAATGTGAGGAGGAATCCAAGATACCATCAGATGATTTGAGATACTCCTCTGATGTGGAGAAGGCGCTGGTGCAAGAACTTCCAGGAAGGCCAAGTTATACACATGCAAGATCCCCTTCGTGGACCGAAGGTGTTAGCTCTCCTGCAGTTCGTAAAAAGAAAGTTAAGGATGTTTCAAAATACATGATTGTTGCTGCCAAAGAGAATCCAAATTTAGCTCAAAAACTTCATGATGTGTTACTTGAAAGTGGTGTTGTTGCTCCCAGAAATTTGTTTACGGAAATATATCCAGAGCAGTTAGATGTGTCAACGCGAACAGAAGATAAAGGGGGGAATAAGGAGAGGTTTGAAATGAAAAAGAGTAAAGGTCAAGGTGATATCAGTTCGACTCACTCTTTGCCTCCACTACCTCAGCACAGGGTGCATTCTAAAGCCAGTCCTTCAGGTCAGCCAGAGCATCTTAAGCCTGTGGAAGGTTTAGGGGTCAGCCTTCCACTTGATACCAGGGAAGTAGCTGGCCAGAATATCTCATCACAGTCTGAAGCAACTCCAGTTAAATATACAAAAAGTGTGCCTGTTGCTGCAGCAGCCGCAGCCGCAGCAGCTGTTGTCGCATCTTCTATGGTAGTTGCAGTAACAAAGTCAAGCGCTGACTCAAATATTCCTGTAGCAGCTGCTGCAACTGCTACTGCTGCAGCAGTGGTTGCAACAACTGCAGCTGTCAACAAGCAGTATGAGCAGGGAACAAGAAGTGATGGGGATGCAGAAGGTTCTGGTTGTGACCCACATGGCAGTGGGGACCGTGAGCATGATGCTTCGACAGTTATCTCGGAAGGCGAGAGAGTCTCGGATCGATCGGCAGGTAACGAAAGTACAAGATCTGACATTGGTGATGATGTAGCAGATTGCGAGATTCCATGGGACGATATCACTTTGGGTGAACGAATTGGACTTGGATCGTATGGGGAGGTCTATCATGGAGACTGGCATGGGACGGAGGTTGCAGTTAAGAGGTTTCTAGACCAAGATTTTTTGGGTGAATCACTTGATGAATTCAGAAGTGAGGTTCGGATAATGAAAAGACTCAGACATCCCAATGTTGTTCTCTTCATGGGAGCAATAACTCGTGCTCCAAATCTTTCCATTGTTACGGAATTTCTTCCAAGAGGTAGTTTATATAGGTTGTTACACCGGCCTAACAATCAATTAGATGAGCGAAGGCGCTTGAGGATGGCTCTTGATGCTGCTCGGGGAATGAATTACTTGCATAACTGCACTCCAGTAATAGTACACCGTGATTTAAAGTCTCCAAACCTTCTCGTTGATAAGAATTGGGTCGTAAAGGTCTGTGATTTTGGATTATCAAGAATGAAGAACAGCACATTTCTCTCCTCGAGGTCCACTGCAGGGACGGCTGAATGGATGGCTCCAGAAGTGCTAAGAAACGAACCTTCAGATGAAAAGTGCGATGTTTATAGCTATGGGGTCATATTGTGGGAGCTCTCTACAATGCAACAGCCATGGGGAGGAATGAACCCAATGCAAGTCGTTGGTGCAGTTGGATTTCAACATCGCCGTCTTGATATTCCAAATGATATTGATCCTGCAATTGCAGATCTTATTGAAAAATGCTGGCAGACAGATCCAAAATTGAGACCCTCATTTGCTGAGATCATGGCTATCCTGAAGCCGTTGCAGAAGCCTATAAGTAGTTCTGCAGTGCCTAGATCTACTGCACAAAGGCCATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0035556 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

1027

Amino Acids

112.22

Weight (kDa)

5.55

Isoelectric Point (pI)

50.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 159 - 362 1.4e-76 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 754 - 1005 2.4e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 756 - 1003 2.7e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 2725
Acc36I ACCTGC 2 cut(s) 263, 2183
AccI GTMKAC 1 cut(s) 65
AccII CGCG 1 cut(s) 1645
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 2 cut(s) 1923, 1929
AclWI GGATC 8 cut(s) 398, 411, 1111, 1437, 2190, 2296, 2927, 2969
AcoI YGGCCR 1 cut(s) 1849
AcsI RAATTY 7 cut(s) 676, 754, 1315, 1543, 1600, 2384, 2486
AcuI CTGAAG 7 cut(s) 288, 498, 1305, 1758, 1893, 2769, 3038
AdeI CACNNNGTG 1 cut(s) 1753
AfaI GTAC 3 cut(s) 334, 2206, 2622
AfeI AGCGCT 1 cut(s) 1981
AfiI CCNNNNNNNGG 6 cut(s) 272, 709, 1452, 1805, 2739, 2858
AflII CTTAAG 2 cut(s) 14, 1793
AflIII ACRYGT 1 cut(s) 822
AjnI CCWGG 3 cut(s) 1247, 1414, 1835
Alw21I GWGCWC 3 cut(s) 460, 2464, 2835
Alw26I GTCTC 9 cut(s) 107, 113, 628, 1149, 1283, 2182, 2307, 2643, 2980
AlwI GGATC 8 cut(s) 398, 411, 1111, 1437, 2190, 2296, 2927, 2969
AlwNI CAGNNNCTG 3 cut(s) 856, 1937, 2009
Ama87I CYCGRG 2 cut(s) 2580, 2725
Aor13HI TCCGGA 1 cut(s) 460
Aor51HI AGCGCT 1 cut(s) 1981
AoxI GGCC 5 cut(s) 699, 1421, 1849, 2525, 3074
ApoI RAATTY 7 cut(s) 676, 754, 1315, 1543, 1600, 2384, 2486
ArsI GACNNNNNNTTYG 2 cut(s) 1711, 1743
Asp700I GAANNNNTTC 2 cut(s) 592, 2490
AspLEI GCGC 3 cut(s) 1399, 1982, 2556
AspS9I GGNCC 6 cut(s) 138, 700, 800, 1455, 2131, 2730
AsuC2I CCSGG 1 cut(s) 1074
AsuHPI GGTGA 5 cut(s) 988, 1718, 2234, 2282, 2381
AvaI CYCGRG 2 cut(s) 2580, 2725
AvaII GGWCC 5 cut(s) 138, 800, 1455, 2131, 2730
BalI TGGCCA 1 cut(s) 1851
BamHI GGATCC 1 cut(s) 403
BanII GRGCYC 2 cut(s) 215, 2835
BauI CACGAG 1 cut(s) 2457
BbsI GAAGAC 1 cut(s) 99
Bbv12I GWGCWC 3 cut(s) 460, 2464, 2835
BbvCI CCTCAGC 1 cut(s) 1743
BceAI ACGGC 3 cut(s) 2760, 2892, 3007
BciT130I CCWGG 3 cut(s) 1249, 1416, 1837
BciVI GTATCC 1 cut(s) 298
BcnI CCSGG 1 cut(s) 1074
BcoDI GTCTC 9 cut(s) 107, 113, 628, 1149, 1283, 2182, 2307, 2643, 2980
BfaI CTAG 7 cut(s) 312, 330, 396, 704, 1152, 2351, 3057
BfmI CTRYAG 8 cut(s) 1269, 1476, 1914, 1998, 2025, 2046, 2736, 3048
BfoI RGCGCY 3 cut(s) 1400, 1983, 2557
BfrI CTTAAG 2 cut(s) 14, 1793
BfuAI ACCTGC 2 cut(s) 263, 2183
BfuI GTATCC 1 cut(s) 298
BglII AGATCT 4 cut(s) 730, 2210, 2947, 3059
BmcAI AGTACT 1 cut(s) 334
Bme1390I CCNGG 4 cut(s) 1074, 1249, 1416, 1837
Bme18I GGWCC 5 cut(s) 138, 800, 1455, 2131, 2730
BmeT110I CYCGRG 2 cut(s) 2580, 2725
BmgT120I GGNCC 6 cut(s) 138, 700, 800, 1455, 2131, 2730
BmiI GGNNCC 5 cut(s) 140, 405, 1000, 2132, 2760
BmrFI CCNGG 4 cut(s) 1074, 1249, 1416, 1837
BmrI ACTGGG 2 cut(s) 210, 649
BmsI GCATC 9 cut(s) 334, 661, 928, 969, 1798, 1955, 2083, 2134, 2563
BmuI ACTGGG 2 cut(s) 210, 649
BpiI GAAGAC 1 cut(s) 99
BplI GAGNNNNNCTC 6 cut(s) 563, 595, 2162, 2194, 2551, 2583
BpmI CTGGAG 3 cut(s) 1866, 2595, 2745
Bpu10I CCTNAGC 2 cut(s) 445, 1743
BpuEI CTTGAG 2 cut(s) 118, 2578
BpuMI CCSGG 1 cut(s) 1074
Bsa29I ATCGAT 1 cut(s) 2185
BsaAI YACGTR 1 cut(s) 1302
BsaBI GATNNNNATC 1 cut(s) 2931
BsaI GGTCTC 1 cut(s) 2980
BsaJI CCNNGG 4 cut(s) 1072, 1836, 2249, 2852
BsaWI WCCGGW 1 cut(s) 460
BsaXI ACNNNNNCTCC 2 cut(s) 2446, 2476
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 709, 1452, 1805, 2739, 2858
Bse118I RCCGGY 1 cut(s) 2523
Bse3DI GCAATG 1 cut(s) 1020
Bse8I GATNNNNATC 1 cut(s) 2931
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 3 cut(s) 1249, 1416, 1837
BseCI ATCGAT 1 cut(s) 2185
BseDI CCNNGG 4 cut(s) 1072, 1836, 2249, 2852
BseJI GATNNNNATC 1 cut(s) 2931
BseLI CCNNNNNNNGG 6 cut(s) 272, 709, 1452, 1805, 2739, 2858
BseMI GCAATG 1 cut(s) 1020
BseMII CTCAG 7 cut(s) 108, 144, 594, 639, 1757, 2431, 2991
BseRI GAGGAG 4 cut(s) 374, 1355, 1369, 2713
BseYI CCCAGC 1 cut(s) 141
BsgI GTGCAG 3 cut(s) 2590, 2907, 3051
Bsh1236I CGCG 1 cut(s) 1645
Bsh1285I CGRYCG 1 cut(s) 2189
BshFI GGCC 5 cut(s) 701, 1423, 1851, 2527, 3076
BshVI ATCGAT 1 cut(s) 2185
BsiEI CGRYCG 1 cut(s) 2189
BsiHKAI GWGCWC 3 cut(s) 460, 2464, 2835
BsiHKCI CYCGRG 2 cut(s) 2580, 2725
BsiSI CCGG 4 cut(s) 461, 473, 1074, 2524
BslFI GGGAC 7 cut(s) 124, 204, 1243, 2144, 2267, 2338, 2755
BslI CCNNNNNNNGG 6 cut(s) 272, 709, 1452, 1805, 2739, 2858
BsmAI GTCTC 9 cut(s) 107, 113, 628, 1149, 1283, 2182, 2307, 2643, 2980
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 7 cut(s) 124, 204, 1243, 2144, 2267, 2338, 2755
BsmI GAATGC 2 cut(s) 594, 1756
BsnI GGCC 5 cut(s) 701, 1423, 1851, 2527, 3076
Bso31I GGTCTC 1 cut(s) 2980
BsoBI CYCGRG 2 cut(s) 2580, 2725
Bsp1286I GDGCHC 4 cut(s) 215, 460, 2464, 2835
Bsp13I TCCGGA 1 cut(s) 460
Bsp19I CCATGG 2 cut(s) 2249, 2852
BspACI CCGC 2 cut(s) 1923, 1929
BspANI GGCC 5 cut(s) 701, 1423, 1851, 2527, 3076
BspCNI CTCAG 7 cut(s) 109, 145, 593, 638, 1756, 2430, 2992
BspDI ATCGAT 1 cut(s) 2185
BspEI TCCGGA 1 cut(s) 460
BspFNI CGCG 1 cut(s) 1645
BspHI TCATGA 1 cut(s) 1561
BspLI GGNNCC 5 cut(s) 140, 405, 1000, 2132, 2760
BspMAI CTGCAG 7 cut(s) 1273, 1480, 1918, 2029, 2050, 2740, 3052
BspMI ACCTGC 2 cut(s) 263, 2183
BspPI GGATC 8 cut(s) 398, 411, 1111, 1437, 2190, 2296, 2927, 2969
BspTI CTTAAG 2 cut(s) 14, 1793
BspTNI GGTCTC 1 cut(s) 2980
BsrDI GCAATG 1 cut(s) 1020
BsrFI RCCGGY 1 cut(s) 2523
BssAI RCCGGY 1 cut(s) 2523
BssECI CCNNGG 4 cut(s) 1072, 1836, 2249, 2852
BssSI CACGAG 1 cut(s) 2457
BssT1I CCWWGG 2 cut(s) 2249, 2852
Bst2BI CACGAG 1 cut(s) 2457
Bst2UI CCWGG 3 cut(s) 1249, 1416, 1837
Bst4CI ACNGT 5 cut(s) 745, 1869, 2135, 2155, 2627
Bst6I CTCTTC 4 cut(s) 1171, 1186, 1281, 2444
BstAFI CTTAAG 2 cut(s) 14, 1793
BstAPI GCANNNNNTGC 5 cut(s) 966, 1753, 2009, 2036, 2045
BstBAI YACGTR 1 cut(s) 1302
BstC8I GCNNGC 2 cut(s) 1849, 2966
BstDSI CCRYGG 2 cut(s) 2249, 2852
BstEII GGTNACC 1 cut(s) 739
BstENI CCTNNNNNAGG 2 cut(s) 270, 1803
BstFNI CGCG 1 cut(s) 1645
BstH2I RGCGCY 3 cut(s) 1400, 1983, 2557
BstHHI GCGC 3 cut(s) 1399, 1982, 2556
BstMAI GTCTC 9 cut(s) 107, 113, 628, 1149, 1283, 2182, 2307, 2643, 2980
BstMCI CGRYCG 1 cut(s) 2189
BstNI CCWGG 3 cut(s) 1249, 1416, 1837
BstNSI RCATGY 2 cut(s) 826, 1439
BstPI GGTNACC 1 cut(s) 739
BstSCI CCNGG 4 cut(s) 1072, 1247, 1414, 1835
BstSFI CTRYAG 8 cut(s) 1269, 1476, 1914, 1998, 2025, 2046, 2736, 3048
BstUI CGCG 1 cut(s) 1645
BstV2I GAAGAC 1 cut(s) 99
BstX2I RGATCY 7 cut(s) 403, 730, 1442, 2210, 2947, 2974, 3059
BstYI RGATCY 7 cut(s) 403, 730, 1442, 2210, 2947, 2974, 3059
Bsu15I ATCGAT 1 cut(s) 2185
BsuI GTATCC 1 cut(s) 298
BsuRI GGCC 5 cut(s) 701, 1423, 1851, 2527, 3076
BsuTUI ATCGAT 1 cut(s) 2185
BtgI CCRYGG 2 cut(s) 2249, 2852
BtgZI GCGATG 2 cut(s) 2814, 2888
BtsI GCAGTG 4 cut(s) 2037, 2131, 2733, 3057
BtsIMutI CAGTG 5 cut(s) 201, 2037, 2131, 2733, 3057
BveI ACCTGC 2 cut(s) 263, 2183
Cac8I GCNNGC 2 cut(s) 1849, 2966
CaiI CAGNNNCTG 3 cut(s) 856, 1937, 2009
CciI TCATGA 1 cut(s) 1561
CfoI GCGC 3 cut(s) 1399, 1982, 2556
Cfr10I RCCGGY 1 cut(s) 2523
Cfr13I GGNCC 6 cut(s) 138, 700, 800, 1455, 2131, 2730
ClaI ATCGAT 1 cut(s) 2185
CseI GACGC 1 cut(s) 130
Csp6I GTAC 3 cut(s) 333, 2205, 2621
CviQI GTAC 3 cut(s) 333, 2205, 2621
DraI TTTAAA 1 cut(s) 2634
DraIII CACNNNGTG 1 cut(s) 1753
EaeI YGGCCR 1 cut(s) 1849
Eam1104I CTCTTC 4 cut(s) 1171, 1186, 1281, 2444
EarI CTCTTC 4 cut(s) 1171, 1186, 1281, 2444
Ecl136II GAGCTC 1 cut(s) 2833
Eco130I CCWWGG 2 cut(s) 2249, 2852
Eco24I GRGCYC 2 cut(s) 215, 2835
Eco31I GGTCTC 1 cut(s) 2980
Eco32I GATATC 3 cut(s) 177, 1711, 2260
Eco47I GGWCC 5 cut(s) 138, 800, 1455, 2131, 2730
Eco47III AGCGCT 1 cut(s) 1981
Eco53kI GAGCTC 1 cut(s) 2833
Eco57I CTGAAG 7 cut(s) 288, 498, 1305, 1758, 1893, 2769, 3038
Eco88I CYCGRG 2 cut(s) 2580, 2725
Eco91I GGTNACC 1 cut(s) 739
EcoICRI GAGCTC 1 cut(s) 2833
EcoNI CCTNNNNNAGG 2 cut(s) 270, 1803
EcoO109I RGGNCCY 1 cut(s) 138
EcoO65I GGTNACC 1 cut(s) 739
EcoRI GAATTC 1 cut(s) 2384
EcoRII CCWGG 3 cut(s) 1247, 1414, 1835
EcoRV GATATC 3 cut(s) 177, 1711, 2260
EcoT14I CCWWGG 2 cut(s) 2249, 2852
EcoT38I GRGCYC 2 cut(s) 215, 2835
ErhI CCWWGG 2 cut(s) 2249, 2852
Esp3I CGTCTC 1 cut(s) 113
FalI AAGNNNNNCTT 6 cut(s) 577, 609, 852, 884, 1432, 1464
FaqI GGGAC 7 cut(s) 124, 204, 1243, 2144, 2267, 2338, 2755
FblI GTMKAC 1 cut(s) 65
FriOI GRGCYC 2 cut(s) 215, 2835
FspBI CTAG 7 cut(s) 312, 330, 396, 704, 1152, 2351, 3057
GlaI GCGC 3 cut(s) 1398, 1981, 2555
GsaI CCCAGC 1 cut(s) 145
GsuI CTGGAG 3 cut(s) 1866, 2595, 2745
HaeII RGCGCY 3 cut(s) 1400, 1983, 2557
HaeIII GGCC 5 cut(s) 701, 1423, 1851, 2527, 3076
HapII CCGG 4 cut(s) 461, 473, 1074, 2524
HgaI GACGC 1 cut(s) 130
HhaI GCGC 3 cut(s) 1399, 1982, 2556
Hin6I GCGC 3 cut(s) 1397, 1980, 2554
HinP1I GCGC 3 cut(s) 1397, 1980, 2554
HincII GTYRAC 4 cut(s) 576, 637, 1641, 2056
HindII GTYRAC 4 cut(s) 576, 637, 1641, 2056
HpaII CCGG 4 cut(s) 461, 473, 1074, 2524
HphI GGTGA 5 cut(s) 988, 1718, 2234, 2282, 2381
HpyCH4III ACNGT 5 cut(s) 745, 1869, 2135, 2155, 2627
HpyCH4IV ACGT 2 cut(s) 724, 1301
HpySE526I ACGT 2 cut(s) 724, 1301
HspAI GCGC 3 cut(s) 1397, 1980, 2554
Kpn2I TCCGGA 1 cut(s) 460
LmnI GCTCC 7 cut(s) 27, 463, 1597, 2447, 2467, 2764, 2830
LweI GCATC 9 cut(s) 334, 661, 928, 969, 1798, 1955, 2083, 2134, 2563
MaeI CTAG 7 cut(s) 312, 330, 396, 704, 1152, 2351, 3057
MaeII ACGT 2 cut(s) 724, 1301
MaeIII GTNAC 8 cut(s) 720, 739, 1569, 1966, 2111, 2195, 2479, 2517
MfeI CAATTG 2 cut(s) 903, 2940
MflI RGATCY 7 cut(s) 403, 730, 1442, 2210, 2947, 2974, 3059
MhlI GDGCHC 4 cut(s) 215, 460, 2464, 2835
MlsI TGGCCA 1 cut(s) 1851
MluNI TGGCCA 1 cut(s) 1851
MlyI GAGTC 7 cut(s) 581, 862, 1157, 1714, 1979, 2184, 2409
MmeI TCCRAC 2 cut(s) 60, 2872
Mox20I TGGCCA 1 cut(s) 1851
MroI TCCGGA 1 cut(s) 460
MroXI GAANNNNTTC 2 cut(s) 592, 2490
MscI TGGCCA 1 cut(s) 1851
MseI TTAA 8 cut(s) 15, 432, 1253, 1497, 1794, 1887, 2340, 2633
MslI CAYNNNNRTG 2 cut(s) 2124, 2427
Msp20I TGGCCA 1 cut(s) 1851
MspA1I CMGCKG 4 cut(s) 620, 1937, 2006, 2051
MspCI CTTAAG 2 cut(s) 14, 1793
MspI CCGG 4 cut(s) 461, 473, 1074, 2524
MspR9I CCNGG 4 cut(s) 1074, 1249, 1416, 1837
MunI CAATTG 2 cut(s) 903, 2940
Mva1269I GAATGC 2 cut(s) 594, 1756
MvaI CCWGG 3 cut(s) 1249, 1416, 1837
MvnI CGCG 1 cut(s) 1645
NciI CCSGG 1 cut(s) 1074
NcoI CCATGG 2 cut(s) 2249, 2852
NlaIV GGNNCC 5 cut(s) 140, 405, 1000, 2132, 2760
NmeAIII GCCGAG 1 cut(s) 895
NmuCI GTSAC 2 cut(s) 720, 2111
NspI RCATGY 2 cut(s) 826, 1439
PaeR7I CTCGAG 1 cut(s) 2725
PagI TCATGA 1 cut(s) 1561
PciI ACATGT 1 cut(s) 822
PctI GAATGC 2 cut(s) 594, 1756
PdmI GAANNNNTTC 2 cut(s) 592, 2490
PfeI GAWTC 8 cut(s) 50, 320, 370, 1280, 1346, 1537, 2245, 2372
PflFI GACNNNGTC 1 cut(s) 571
PfoI TCCNGGA 1 cut(s) 1414
Ple19I CGATCG 1 cut(s) 2189
PleI GAGTC 7 cut(s) 580, 861, 1157, 1714, 1979, 2183, 2409
PpsI GAGTC 7 cut(s) 580, 861, 1157, 1714, 1979, 2183, 2409
Ppu21I YACGTR 1 cut(s) 1302
PpuMI RGGWCCY 1 cut(s) 138
PscI ACATGT 1 cut(s) 822
Psp124BI GAGCTC 1 cut(s) 2835
Psp5II RGGWCCY 1 cut(s) 138
Psp6I CCWGG 3 cut(s) 1247, 1414, 1835
PspEI GGTNACC 1 cut(s) 739
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 3 cut(s) 1247, 1414, 1835
PspN4I GGNNCC 5 cut(s) 140, 405, 1000, 2132, 2760
PspPI GGNCC 6 cut(s) 138, 700, 800, 1455, 2131, 2730
PspPPI RGGWCCY 1 cut(s) 138
PspXI VCTCGAGB 1 cut(s) 2725
PstI CTGCAG 7 cut(s) 1273, 1480, 1918, 2029, 2050, 2740, 3052
PstNI CAGNNNCTG 3 cut(s) 856, 1937, 2009
PsuI RGATCY 7 cut(s) 403, 730, 1442, 2210, 2947, 2974, 3059
PsyI GACNNNGTC 1 cut(s) 571
PvuI CGATCG 1 cut(s) 2189
PvuII CAGCTG 4 cut(s) 620, 1937, 2006, 2051
RsaI GTAC 3 cut(s) 334, 2206, 2622
RsaNI GTAC 3 cut(s) 333, 2205, 2621
RseI CAYNNNNRTG 2 cut(s) 2124, 2427
SacI GAGCTC 1 cut(s) 2835
SaqAI TTAA 8 cut(s) 15, 432, 1253, 1497, 1794, 1887, 2340, 2633
Sau96I GGNCC 6 cut(s) 138, 700, 800, 1455, 2131, 2730
ScaI AGTACT 1 cut(s) 334
SchI GAGTC 7 cut(s) 581, 862, 1157, 1714, 1979, 2184, 2409
ScrFI CCNGG 4 cut(s) 1074, 1249, 1416, 1837
SduI GDGCHC 4 cut(s) 215, 460, 2464, 2835
SfaNI GCATC 9 cut(s) 334, 661, 928, 969, 1798, 1955, 2083, 2134, 2563
SfcI CTRYAG 8 cut(s) 1269, 1476, 1914, 1998, 2025, 2046, 2736, 3048
Sfr274I CTCGAG 1 cut(s) 2725
SinI GGWCC 5 cut(s) 138, 800, 1455, 2131, 2730
SlaI CTCGAG 1 cut(s) 2725
SmiMI CAYNNNNRTG 2 cut(s) 2124, 2427
SmlI CTYRAG 5 cut(s) 14, 133, 1793, 2557, 2725
SmoI CTYRAG 5 cut(s) 14, 133, 1793, 2557, 2725
SsiI CCGC 2 cut(s) 1923, 1929
SspI AATATT 2 cut(s) 564, 1993
SspMI CTAG 7 cut(s) 312, 330, 396, 704, 1152, 2351, 3057
SstI GAGCTC 1 cut(s) 2835
StyD4I CCNGG 4 cut(s) 1072, 1247, 1414, 1835
StyI CCWWGG 2 cut(s) 2249, 2852
TaaI ACNGT 5 cut(s) 745, 1869, 2135, 2155, 2627
TaiI ACGT 2 cut(s) 727, 1304
TaqI TCGA 4 cut(s) 1718, 2150, 2185, 2726
TaqII GACCGA 1 cut(s) 1472
TatI WGTACW 3 cut(s) 332, 2204, 2620
TauI GCSGC 2 cut(s) 1925, 1931
TfiI GAWTC 8 cut(s) 50, 320, 370, 1280, 1346, 1537, 2245, 2372
Tru1I TTAA 8 cut(s) 15, 432, 1253, 1497, 1794, 1887, 2340, 2633
Tru9I TTAA 8 cut(s) 15, 432, 1253, 1497, 1794, 1887, 2340, 2633
TscAI CASTG 5 cut(s) 201, 2037, 2131, 2740, 3057
TseFI GTSAC 2 cut(s) 720, 2111
Tsp45I GTSAC 2 cut(s) 720, 2111
TspGWI ACGGA 4 cut(s) 584, 1625, 2342, 2498
TspRI CASTG 5 cut(s) 201, 2037, 2131, 2740, 3057
Tth111I GACNNNGTC 1 cut(s) 571
Vha464I CTTAAG 2 cut(s) 14, 1793
VpaK11BI GGWCC 5 cut(s) 138, 800, 1455, 2131, 2730
XagI CCTNNNNNAGG 2 cut(s) 270, 1803
XapI RAATTY 7 cut(s) 676, 754, 1315, 1543, 1600, 2384, 2486
XbaI TCTAGA 2 cut(s) 1151, 2350
XceI RCATGY 2 cut(s) 826, 1439
XhoI CTCGAG 1 cut(s) 2725
XmiI GTMKAC 1 cut(s) 65
XmnI GAANNNNTTC 2 cut(s) 592, 2490
XspI CTAG 7 cut(s) 312, 330, 396, 704, 1152, 2351, 3057
ZrmI AGTACT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.