Rw7G001360

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0010425
Physical Location & Seq
Forward (+)
1124678 .. 1131760
7083 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G001360.1

Sequence Viewer

Length: 3102 bp
ATGAAGAACCTTCTTAAGAAGCTCCATATCATGTCCAACCAATCAGAAGATTCAGCAGAGGGGTCTACTTCATCAAAGAGCAGCACTAAGGCTATTGATAAGTCGTCTTCCGAGACTGAGACGCTATTGCACTCAAGGTCCCAGCAGAGTTCTGAGCATAAACACTTGTCTGGGATATCAGGTTGGCTCAATTCAGTGGCTAATAGAAAGAGCCCTAGTCCCCCATCATCTTCAAATGTTATGAGGGGGGAGAGAATTGAGCAACCTGAAGCAGGTAGTAGGAGTGGTGGGGATGTTGTTTCGGATACAGCTAGGCGTGATTCGGGGTCTAGTACTTCAAGGGATGCTGATATAATGGAGGAGTATCAGATTCAACTGGCTTTGGAGTTGAGTGCTAGGGAGGATCCAGAGGCAGTTCAGATTGAGGCTGTTAAGCAGATTAGCTTAGGCTCTTGTGCTCCGGATAATACTCCGGCTGAAGTTATTGCCTATCGTATTGGACTTGTCCATTCTTCACAGAATTACAATGCTCTTAGCTATGATGATAAGATCATGGATGGTTTCTATGACCTGTATGGAATATTGACGGAGTCAACCTCAGAAAGAATGCCTTCCCTTGTTGATCTGCAAGGAACAGCTGTCTCAGATAATGTCAACTGGGAAGCAGTTTTGGTCAATAGAGCTGCCGATGCGAATTTATTGAAACTTGAACAGATGGCCCTAGAAATGGCTGTAAAGTCACGTTCAGATCTTCGGGTTACCGTAAACAGAAATTTGGTGCGAAAACTTGCTCTTTTAGTTGCTAGCTCTATGGGTGGACCAGTTGCAAATCCTTACAACATGTTGAAGGCATGGCAAAATCTTAGCCAGAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACAATTGGATTAGCTCGGCATCGTGCATTGTTGTTCAAGGCTTTGGCTGATAGTGTTGGCATCCCATGCCGATTGGTGAAAGGACAACAATACACGGGTTCCAATGATGTAGCAATGAACTTTGTAAAGATTGATGATGGAAGGGAGTATATTGTTGATCTGATGGCTGACCCCGGCACACTTATTCCATCTGATGAAGCTGGATCACATATAGAATATGATGAACCTTACTTTTCTGCCAGTCCTTTGTCTAGAGACATTGACTCTTCTCATGTCGCCTCTTCCAGTAGTGGAATTGGGAGTTCATTTGAAGAACATTCAGACTTTGGGACATTAGACAAAAAATCCAGGTTAAGAAATTATAGTTCTGCAGACAGGGAATCTGAAGAGACAGAAGCCCCATATTTTCGTGAAAATTTACCCAGACCAACTGAATGTGAGGAGGAATCCAAGATACCATCAGATGATTTGAGATACTCCTCTGATGTGGAGAAGGCGCTGGTGCAAGAACTTCCAGGAAGGCCAAGTTATACACATGCAAGATCCCCTTCGTGGACCGAAGGTGTTAGCTCTCCTGCAGTTCGTAAAAAGAAAGTTAAGGATGTTTCAAAATACATGATTGTTGCTGCCAAAGAGAATCCAAATTTAGCTCAAAAACTTCATGATGTGTTACTTGAAAGTGGTGTTGTTGCTCCCAGAAATTTGTTTACGGAAATATATCCAGAGCAGTTAGATGTGTCAACGCGAACAGAAGATAAGGGGGGGAATAAGGAGAGGTTTGAAATGAAAAAGAGTAAAGGTCAAGGTGATATCAGTTCGACTCACTCTTTGCCTCCACTACCTCAGCACAGGGTGCATTCTAAAGCCAGTCCTTCAGGTCAGCCAGAGCATCTTAAGCCTGTGGAAGGTTTAGGGGTCAGCCTTCCACTTGATACCAGGGAAGTAGCTGGCCAGAATATCTCATCACAGTCTGAAGCAACTCCAGTTAAATATACAAAAAGTGTGCCTGTTGCTGCAGCAGCCGCAGCCGCAGCAGCTGTTGTCGCATCTTCTATGGTAGTTGCAGTAACAAAGTCAAGCGCTGACTCAAATATTCCTGTAGCAGCTGCTGCAACTGCTACTGCTGCAGCAGTGGTTGCAACAACTGCAGCTGTCAACAAGCAGTTTGAGCAGGGAACAAGAAGTGATGGGGATGCAGAAGGTTCTGGTTGTGAACCACATGGCAGTGGGGACCGTGAGCATGATGCTTCGACAGTTATCTCGGAAGGCGAGAGAGTCTCGGATCGATCGGCAGGTAACGAAAGTACAAGATCTGACATTGGTGATGATGTAGCAGATTGCGAGATTCCATGGGAGGATATCACCTTGGGTGAACGAATTGGACTTGGATCGTATGGAGAGGTCTATCATGGAGACTGGCATGGGACGGAGGTTGCAGTTAAGAGGTTTCTAGACCAAGATTTTTTGGGTGAATCACTTGATGAATTCAGAAGTGAGGTTCGGATAATGAAAAGACTCAGACATCCCAATGTTGTTCTCTTCATGGGAGCAATAACTCGTGCTCCAAATCTTTCCATTGTTACGGAATTTCTTCCAAGAGGTAGTTTATATAGGTTGTTACACCGGCCTAACAATCAATTAGATGAGCGAAGGCGCTTGAGGATGGCTCTTGATGCTGCTCGGGGAATGAATTACTTGCATAACTGCACTCCAGTAATAGTACACCGTGATTTAAAGTCTCCAAACCTTCTCGTTGATAAGAATTGGGTCGTAAAGGTCTGTGATTTTGGATTATCAAGAATGAAGAACAGCACATTTCTCTCCTCGAGGTCCACTGCCGGGACGGCTGAATGGATGGCTCCAGAAGTGCTAAGAAACGAACCTTCAGATGAAAAGTGCGATGTTTATAGCTATGGGGTCATATTGTGGGAGCTCTCTACAATGCAACAGCCATGGGGAGGAATGAACCCAATGCAAGTCGTTGGTGCAGTTGGATTTCAACATCGCCGTCTTGATATTCCAAATGATATTGATCCTGCAATTGCAGATCTTATTGAAAAATGCTGGCAGACAGATCCAAAATTGAGACCCTCATTTGCTGAGATCATGGCTATCCTGAAGCCGTTGCAGAAGCCTATAAGTAGTTCTGCAGTGCCTAGATCTACTGCACAAAGGCCATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0035556 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

1033

Amino Acids

112.68

Weight (kDa)

5.58

Isoelectric Point (pI)

51.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 174 - 368 5.5e-71 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 760 - 1011 2.5e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 762 - 1009 2.7e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 2743
Acc36I ACCTGC 2 cut(s) 263, 2201
AccI GTMKAC 1 cut(s) 65
AccII CGCG 1 cut(s) 1663
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 2 cut(s) 1941, 1947
AclWI GGATC 8 cut(s) 398, 411, 1129, 1455, 2208, 2314, 2945, 2987
AcoI YGGCCR 1 cut(s) 1867
AcsI RAATTY 7 cut(s) 694, 772, 1333, 1561, 1618, 2402, 2504
AcuI CTGAAG 7 cut(s) 288, 498, 1323, 1776, 1911, 2787, 3056
AdeI CACNNNGTG 1 cut(s) 1771
AfaI GTAC 3 cut(s) 334, 2224, 2640
AfeI AGCGCT 1 cut(s) 1999
AfiI CCNNNNNNNGG 6 cut(s) 272, 727, 1470, 1823, 2757, 2876
AflII CTTAAG 2 cut(s) 14, 1811
AflIII ACRYGT 1 cut(s) 840
AjnI CCWGG 3 cut(s) 1265, 1432, 1853
Alw21I GWGCWC 3 cut(s) 460, 2482, 2853
Alw26I GTCTC 9 cut(s) 107, 113, 646, 1167, 1301, 2200, 2325, 2661, 2998
AlwI GGATC 8 cut(s) 398, 411, 1129, 1455, 2208, 2314, 2945, 2987
AlwNI CAGNNNCTG 3 cut(s) 874, 1955, 2027
Ama87I CYCGRG 2 cut(s) 2598, 2743
Aor13HI TCCGGA 1 cut(s) 460
Aor51HI AGCGCT 1 cut(s) 1999
AoxI GGCC 5 cut(s) 717, 1439, 1867, 2543, 3092
ApoI RAATTY 7 cut(s) 694, 772, 1333, 1561, 1618, 2402, 2504
ArsI GACNNNNNNTTYG 2 cut(s) 1729, 1761
Asp700I GAANNNNTTC 2 cut(s) 610, 2508
AspLEI GCGC 3 cut(s) 1417, 2000, 2574
AspS9I GGNCC 6 cut(s) 138, 718, 818, 1473, 2149, 2748
AsuC2I CCSGG 2 cut(s) 1092, 2758
AsuHPI GGTGA 6 cut(s) 1006, 1736, 2252, 2272, 2300, 2399
AsuNHI GCTAGC 1 cut(s) 803
AvaI CYCGRG 2 cut(s) 2598, 2743
AvaII GGWCC 5 cut(s) 138, 818, 1473, 2149, 2748
BalI TGGCCA 1 cut(s) 1869
BamHI GGATCC 1 cut(s) 403
BanII GRGCYC 2 cut(s) 215, 2853
BauI CACGAG 1 cut(s) 2475
BbsI GAAGAC 1 cut(s) 99
Bbv12I GWGCWC 3 cut(s) 460, 2482, 2853
BbvCI CCTCAGC 1 cut(s) 1761
BceAI ACGGC 3 cut(s) 2778, 2910, 3025
BciT130I CCWGG 3 cut(s) 1267, 1434, 1855
BciVI GTATCC 1 cut(s) 298
BcnI CCSGG 2 cut(s) 1092, 2758
BcoDI GTCTC 9 cut(s) 107, 113, 646, 1167, 1301, 2200, 2325, 2661, 2998
BfaI CTAG 9 cut(s) 216, 312, 330, 396, 722, 804, 1170, 2369, 3075
BfmI CTRYAG 7 cut(s) 1287, 1494, 1932, 2016, 2043, 2064, 3066
BfoI RGCGCY 3 cut(s) 1418, 2001, 2575
BfrI CTTAAG 2 cut(s) 14, 1811
BfuAI ACCTGC 2 cut(s) 263, 2201
BfuI GTATCC 1 cut(s) 298
BglI GCCNNNNNGGC 1 cut(s) 2762
BglII AGATCT 4 cut(s) 748, 2228, 2965, 3077
BmcAI AGTACT 1 cut(s) 334
Bme1390I CCNGG 5 cut(s) 1092, 1267, 1434, 1855, 2758
Bme18I GGWCC 5 cut(s) 138, 818, 1473, 2149, 2748
BmeT110I CYCGRG 2 cut(s) 2598, 2743
BmgT120I GGNCC 6 cut(s) 138, 718, 818, 1473, 2149, 2748
BmiI GGNNCC 5 cut(s) 140, 405, 1018, 2150, 2778
BmrFI CCNGG 5 cut(s) 1092, 1267, 1434, 1855, 2758
BmrI ACTGGG 1 cut(s) 667
BmsI GCATC 9 cut(s) 334, 679, 946, 987, 1816, 1973, 2101, 2152, 2581
BmtI GCTAGC 1 cut(s) 807
BmuI ACTGGG 1 cut(s) 667
BpiI GAAGAC 1 cut(s) 99
BplI GAGNNNNNCTC 6 cut(s) 581, 613, 2180, 2212, 2569, 2601
BpmI CTGGAG 3 cut(s) 1884, 2613, 2763
Bpu10I CCTNAGC 2 cut(s) 445, 1761
BpuEI CTTGAG 2 cut(s) 118, 2596
BpuMI CCSGG 2 cut(s) 1092, 2758
Bsa29I ATCGAT 1 cut(s) 2203
BsaBI GATNNNNATC 1 cut(s) 2949
BsaI GGTCTC 1 cut(s) 2998
BsaJI CCNNGG 5 cut(s) 1090, 1854, 2267, 2283, 2870
BsaWI WCCGGW 1 cut(s) 460
BsaXI ACNNNNNCTCC 2 cut(s) 2464, 2494
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 727, 1470, 1823, 2757, 2876
Bse118I RCCGGY 1 cut(s) 2541
Bse1I ACTGG 9 cut(s) 381, 662, 821, 1158, 1203, 1785, 1901, 2339, 2630
Bse3DI GCAATG 1 cut(s) 1038
Bse8I GATNNNNATC 1 cut(s) 2949
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 3 cut(s) 1267, 1434, 1855
BseCI ATCGAT 1 cut(s) 2203
BseDI CCNNGG 5 cut(s) 1090, 1854, 2267, 2283, 2870
BseJI GATNNNNATC 1 cut(s) 2949
BseLI CCNNNNNNNGG 6 cut(s) 272, 727, 1470, 1823, 2757, 2876
BseMI GCAATG 1 cut(s) 1038
BseMII CTCAG 7 cut(s) 108, 144, 612, 657, 1775, 2449, 3009
BseNI ACTGG 9 cut(s) 381, 662, 821, 1158, 1203, 1785, 1901, 2339, 2630
BseRI GAGGAG 4 cut(s) 374, 1373, 1387, 2731
BseYI CCCAGC 1 cut(s) 141
BsgI GTGCAG 3 cut(s) 2608, 2925, 3069
Bsh1236I CGCG 1 cut(s) 1663
Bsh1285I CGRYCG 1 cut(s) 2207
BshFI GGCC 5 cut(s) 719, 1441, 1869, 2545, 3094
BshVI ATCGAT 1 cut(s) 2203
BsiEI CGRYCG 1 cut(s) 2207
BsiHKAI GWGCWC 3 cut(s) 460, 2482, 2853
BsiHKCI CYCGRG 2 cut(s) 2598, 2743
BsiSI CCGG 5 cut(s) 461, 473, 1092, 2542, 2757
BslFI GGGAC 6 cut(s) 124, 204, 1261, 2162, 2356, 2773
BslI CCNNNNNNNGG 6 cut(s) 272, 727, 1470, 1823, 2757, 2876
BsmAI GTCTC 9 cut(s) 107, 113, 646, 1167, 1301, 2200, 2325, 2661, 2998
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 6 cut(s) 124, 204, 1261, 2162, 2356, 2773
BsmI GAATGC 2 cut(s) 612, 1774
BsnI GGCC 5 cut(s) 719, 1441, 1869, 2545, 3094
Bso31I GGTCTC 1 cut(s) 2998
BsoBI CYCGRG 2 cut(s) 2598, 2743
Bsp1286I GDGCHC 4 cut(s) 215, 460, 2482, 2853
Bsp13I TCCGGA 1 cut(s) 460
Bsp19I CCATGG 2 cut(s) 2267, 2870
BspACI CCGC 2 cut(s) 1941, 1947
BspANI GGCC 5 cut(s) 719, 1441, 1869, 2545, 3094
BspCNI CTCAG 7 cut(s) 109, 145, 611, 656, 1774, 2448, 3010
BspDI ATCGAT 1 cut(s) 2203
BspEI TCCGGA 1 cut(s) 460
BspFNI CGCG 1 cut(s) 1663
BspHI TCATGA 1 cut(s) 1579
BspLI GGNNCC 5 cut(s) 140, 405, 1018, 2150, 2778
BspMAI CTGCAG 6 cut(s) 1291, 1498, 1936, 2047, 2068, 3070
BspMI ACCTGC 2 cut(s) 263, 2201
BspOI GCTAGC 1 cut(s) 807
BspPI GGATC 8 cut(s) 398, 411, 1129, 1455, 2208, 2314, 2945, 2987
BspTI CTTAAG 2 cut(s) 14, 1811
BspTNI GGTCTC 1 cut(s) 2998
BsrDI GCAATG 1 cut(s) 1038
BsrFI RCCGGY 1 cut(s) 2541
BsrI ACTGG 9 cut(s) 381, 662, 821, 1158, 1203, 1785, 1901, 2339, 2630
BssAI RCCGGY 1 cut(s) 2541
BssECI CCNNGG 5 cut(s) 1090, 1854, 2267, 2283, 2870
BssSI CACGAG 1 cut(s) 2475
BssT1I CCWWGG 3 cut(s) 2267, 2283, 2870
Bst2BI CACGAG 1 cut(s) 2475
Bst2UI CCWGG 3 cut(s) 1267, 1434, 1855
Bst4CI ACNGT 5 cut(s) 763, 1887, 2153, 2173, 2645
Bst6I CTCTTC 4 cut(s) 1189, 1204, 1299, 2462
BstAFI CTTAAG 2 cut(s) 14, 1811
BstAPI GCANNNNNTGC 5 cut(s) 984, 1771, 2027, 2054, 2063
BstC8I GCNNGC 3 cut(s) 805, 1867, 2984
BstDSI CCRYGG 2 cut(s) 2267, 2870
BstEII GGTNACC 1 cut(s) 757
BstENI CCTNNNNNAGG 2 cut(s) 270, 1821
BstFNI CGCG 1 cut(s) 1663
BstH2I RGCGCY 3 cut(s) 1418, 2001, 2575
BstHHI GCGC 3 cut(s) 1417, 2000, 2574
BstMAI GTCTC 9 cut(s) 107, 113, 646, 1167, 1301, 2200, 2325, 2661, 2998
BstMCI CGRYCG 1 cut(s) 2207
BstNI CCWGG 3 cut(s) 1267, 1434, 1855
BstNSI RCATGY 2 cut(s) 844, 1457
BstPI GGTNACC 1 cut(s) 757
BstSCI CCNGG 5 cut(s) 1090, 1265, 1432, 1853, 2756
BstSFI CTRYAG 7 cut(s) 1287, 1494, 1932, 2016, 2043, 2064, 3066
BstUI CGCG 1 cut(s) 1663
BstV2I GAAGAC 1 cut(s) 99
BstX2I RGATCY 7 cut(s) 403, 748, 1460, 2228, 2965, 2992, 3077
BstYI RGATCY 7 cut(s) 403, 748, 1460, 2228, 2965, 2992, 3077
Bsu15I ATCGAT 1 cut(s) 2203
BsuI GTATCC 1 cut(s) 298
BsuRI GGCC 5 cut(s) 719, 1441, 1869, 2545, 3094
BsuTUI ATCGAT 1 cut(s) 2203
BtgI CCRYGG 2 cut(s) 2267, 2870
BtgZI GCGATG 2 cut(s) 2832, 2906
BtsI GCAGTG 4 cut(s) 2055, 2149, 2751, 3075
BtsIMutI CAGTG 5 cut(s) 201, 2055, 2149, 2751, 3075
BveI ACCTGC 2 cut(s) 263, 2201
Cac8I GCNNGC 3 cut(s) 805, 1867, 2984
CaiI CAGNNNCTG 3 cut(s) 874, 1955, 2027
CciI TCATGA 1 cut(s) 1579
CfoI GCGC 3 cut(s) 1417, 2000, 2574
Cfr10I RCCGGY 1 cut(s) 2541
Cfr13I GGNCC 6 cut(s) 138, 718, 818, 1473, 2149, 2748
ClaI ATCGAT 1 cut(s) 2203
CseI GACGC 1 cut(s) 130
Csp6I GTAC 3 cut(s) 333, 2223, 2639
CviQI GTAC 3 cut(s) 333, 2223, 2639
DraI TTTAAA 1 cut(s) 2652
DraIII CACNNNGTG 1 cut(s) 1771
EaeI YGGCCR 1 cut(s) 1867
Eam1104I CTCTTC 4 cut(s) 1189, 1204, 1299, 2462
EarI CTCTTC 4 cut(s) 1189, 1204, 1299, 2462
Ecl136II GAGCTC 1 cut(s) 2851
Eco130I CCWWGG 3 cut(s) 2267, 2283, 2870
Eco24I GRGCYC 2 cut(s) 215, 2853
Eco31I GGTCTC 1 cut(s) 2998
Eco32I GATATC 3 cut(s) 177, 1729, 2278
Eco47I GGWCC 5 cut(s) 138, 818, 1473, 2149, 2748
Eco47III AGCGCT 1 cut(s) 1999
Eco53kI GAGCTC 1 cut(s) 2851
Eco57I CTGAAG 7 cut(s) 288, 498, 1323, 1776, 1911, 2787, 3056
Eco88I CYCGRG 2 cut(s) 2598, 2743
Eco91I GGTNACC 1 cut(s) 757
EcoICRI GAGCTC 1 cut(s) 2851
EcoNI CCTNNNNNAGG 2 cut(s) 270, 1821
EcoO109I RGGNCCY 1 cut(s) 138
EcoO65I GGTNACC 1 cut(s) 757
EcoRI GAATTC 1 cut(s) 2402
EcoRII CCWGG 3 cut(s) 1265, 1432, 1853
EcoRV GATATC 3 cut(s) 177, 1729, 2278
EcoT14I CCWWGG 3 cut(s) 2267, 2283, 2870
EcoT38I GRGCYC 2 cut(s) 215, 2853
ErhI CCWWGG 3 cut(s) 2267, 2283, 2870
Esp3I CGTCTC 1 cut(s) 113
FalI AAGNNNNNCTT 6 cut(s) 595, 627, 870, 902, 1450, 1482
FaqI GGGAC 6 cut(s) 124, 204, 1261, 2162, 2356, 2773
FblI GTMKAC 1 cut(s) 65
FriOI GRGCYC 2 cut(s) 215, 2853
FspBI CTAG 9 cut(s) 216, 312, 330, 396, 722, 804, 1170, 2369, 3075
GlaI GCGC 3 cut(s) 1416, 1999, 2573
GsaI CCCAGC 1 cut(s) 145
GsuI CTGGAG 3 cut(s) 1884, 2613, 2763
HaeII RGCGCY 3 cut(s) 1418, 2001, 2575
HaeIII GGCC 5 cut(s) 719, 1441, 1869, 2545, 3094
HapII CCGG 5 cut(s) 461, 473, 1092, 2542, 2757
HgaI GACGC 1 cut(s) 130
HhaI GCGC 3 cut(s) 1417, 2000, 2574
Hin6I GCGC 3 cut(s) 1415, 1998, 2572
HinP1I GCGC 3 cut(s) 1415, 1998, 2572
HincII GTYRAC 4 cut(s) 594, 655, 1659, 2074
HindII GTYRAC 4 cut(s) 594, 655, 1659, 2074
HpaII CCGG 5 cut(s) 461, 473, 1092, 2542, 2757
HphI GGTGA 6 cut(s) 1006, 1736, 2252, 2272, 2300, 2399
HpyCH4III ACNGT 5 cut(s) 763, 1887, 2153, 2173, 2645
HpyCH4IV ACGT 1 cut(s) 742
HpySE526I ACGT 1 cut(s) 742
HspAI GCGC 3 cut(s) 1415, 1998, 2572
Kpn2I TCCGGA 1 cut(s) 460
LmnI GCTCC 7 cut(s) 27, 463, 1615, 2465, 2485, 2782, 2848
LweI GCATC 9 cut(s) 334, 679, 946, 987, 1816, 1973, 2101, 2152, 2581
MaeI CTAG 9 cut(s) 216, 312, 330, 396, 722, 804, 1170, 2369, 3075
MaeII ACGT 1 cut(s) 742
MaeIII GTNAC 7 cut(s) 738, 757, 1587, 1984, 2213, 2497, 2535
MfeI CAATTG 2 cut(s) 921, 2958
MflI RGATCY 7 cut(s) 403, 748, 1460, 2228, 2965, 2992, 3077
MhlI GDGCHC 4 cut(s) 215, 460, 2482, 2853
MlsI TGGCCA 1 cut(s) 1869
MluNI TGGCCA 1 cut(s) 1869
MlyI GAGTC 7 cut(s) 599, 880, 1175, 1732, 1997, 2202, 2427
MmeI TCCRAC 2 cut(s) 60, 2890
Mox20I TGGCCA 1 cut(s) 1869
MroI TCCGGA 1 cut(s) 460
MroXI GAANNNNTTC 2 cut(s) 610, 2508
MscI TGGCCA 1 cut(s) 1869
MseI TTAA 8 cut(s) 15, 432, 1271, 1515, 1812, 1905, 2358, 2651
MslI CAYNNNNRTG 2 cut(s) 2142, 2445
Msp20I TGGCCA 1 cut(s) 1869
MspA1I CMGCKG 4 cut(s) 638, 1955, 2024, 2069
MspCI CTTAAG 2 cut(s) 14, 1811
MspI CCGG 5 cut(s) 461, 473, 1092, 2542, 2757
MspR9I CCNGG 5 cut(s) 1092, 1267, 1434, 1855, 2758
MunI CAATTG 2 cut(s) 921, 2958
Mva1269I GAATGC 2 cut(s) 612, 1774
MvaI CCWGG 3 cut(s) 1267, 1434, 1855
MvnI CGCG 1 cut(s) 1663
NciI CCSGG 2 cut(s) 1092, 2758
NcoI CCATGG 2 cut(s) 2267, 2870
NheI GCTAGC 1 cut(s) 803
NlaIV GGNNCC 5 cut(s) 140, 405, 1018, 2150, 2778
NmeAIII GCCGAG 1 cut(s) 913
NmuCI GTSAC 1 cut(s) 738
NspI RCATGY 2 cut(s) 844, 1457
PaeR7I CTCGAG 1 cut(s) 2743
PagI TCATGA 1 cut(s) 1579
PciI ACATGT 1 cut(s) 840
PctI GAATGC 2 cut(s) 612, 1774
PdmI GAANNNNTTC 2 cut(s) 610, 2508
PfeI GAWTC 8 cut(s) 50, 320, 370, 1298, 1364, 1555, 2263, 2390
PflFI GACNNNGTC 1 cut(s) 589
PfoI TCCNGGA 1 cut(s) 1432
Ple19I CGATCG 1 cut(s) 2207
PleI GAGTC 7 cut(s) 598, 879, 1175, 1732, 1997, 2201, 2427
PpsI GAGTC 7 cut(s) 598, 879, 1175, 1732, 1997, 2201, 2427
PpuMI RGGWCCY 1 cut(s) 138
PscI ACATGT 1 cut(s) 840
Psp124BI GAGCTC 1 cut(s) 2853
Psp5II RGGWCCY 1 cut(s) 138
Psp6I CCWGG 3 cut(s) 1265, 1432, 1853
PspEI GGTNACC 1 cut(s) 757
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 3 cut(s) 1265, 1432, 1853
PspN4I GGNNCC 5 cut(s) 140, 405, 1018, 2150, 2778
PspPI GGNCC 6 cut(s) 138, 718, 818, 1473, 2149, 2748
PspPPI RGGWCCY 1 cut(s) 138
PspXI VCTCGAGB 1 cut(s) 2743
PstI CTGCAG 6 cut(s) 1291, 1498, 1936, 2047, 2068, 3070
PstNI CAGNNNCTG 3 cut(s) 874, 1955, 2027
PsuI RGATCY 7 cut(s) 403, 748, 1460, 2228, 2965, 2992, 3077
PsyI GACNNNGTC 1 cut(s) 589
PvuI CGATCG 1 cut(s) 2207
PvuII CAGCTG 4 cut(s) 638, 1955, 2024, 2069
RsaI GTAC 3 cut(s) 334, 2224, 2640
RsaNI GTAC 3 cut(s) 333, 2223, 2639
RseI CAYNNNNRTG 2 cut(s) 2142, 2445
SacI GAGCTC 1 cut(s) 2853
SaqAI TTAA 8 cut(s) 15, 432, 1271, 1515, 1812, 1905, 2358, 2651
Sau96I GGNCC 6 cut(s) 138, 718, 818, 1473, 2149, 2748
ScaI AGTACT 1 cut(s) 334
SchI GAGTC 7 cut(s) 599, 880, 1175, 1732, 1997, 2202, 2427
ScrFI CCNGG 5 cut(s) 1092, 1267, 1434, 1855, 2758
SduI GDGCHC 4 cut(s) 215, 460, 2482, 2853
SfaNI GCATC 9 cut(s) 334, 679, 946, 987, 1816, 1973, 2101, 2152, 2581
SfcI CTRYAG 7 cut(s) 1287, 1494, 1932, 2016, 2043, 2064, 3066
Sfr274I CTCGAG 1 cut(s) 2743
SinI GGWCC 5 cut(s) 138, 818, 1473, 2149, 2748
SlaI CTCGAG 1 cut(s) 2743
SmiMI CAYNNNNRTG 2 cut(s) 2142, 2445
SmlI CTYRAG 5 cut(s) 14, 133, 1811, 2575, 2743
SmoI CTYRAG 5 cut(s) 14, 133, 1811, 2575, 2743
SsiI CCGC 2 cut(s) 1941, 1947
SspI AATATT 2 cut(s) 582, 2011
SspMI CTAG 9 cut(s) 216, 312, 330, 396, 722, 804, 1170, 2369, 3075
SstI GAGCTC 1 cut(s) 2853
StyD4I CCNGG 5 cut(s) 1090, 1265, 1432, 1853, 2756
StyI CCWWGG 3 cut(s) 2267, 2283, 2870
TaaI ACNGT 5 cut(s) 763, 1887, 2153, 2173, 2645
TaiI ACGT 1 cut(s) 745
TaqI TCGA 4 cut(s) 1736, 2168, 2203, 2744
TaqII GACCGA 1 cut(s) 1490
TatI WGTACW 3 cut(s) 332, 2222, 2638
TauI GCSGC 2 cut(s) 1943, 1949
TfiI GAWTC 8 cut(s) 50, 320, 370, 1298, 1364, 1555, 2263, 2390
Tru1I TTAA 8 cut(s) 15, 432, 1271, 1515, 1812, 1905, 2358, 2651
Tru9I TTAA 8 cut(s) 15, 432, 1271, 1515, 1812, 1905, 2358, 2651
TscAI CASTG 5 cut(s) 201, 2055, 2149, 2758, 3075
TseFI GTSAC 1 cut(s) 738
Tsp45I GTSAC 1 cut(s) 738
TspGWI ACGGA 4 cut(s) 602, 1643, 2360, 2516
TspRI CASTG 5 cut(s) 201, 2055, 2149, 2758, 3075
Tth111I GACNNNGTC 1 cut(s) 589
Vha464I CTTAAG 2 cut(s) 14, 1811
VpaK11BI GGWCC 5 cut(s) 138, 818, 1473, 2149, 2748
XagI CCTNNNNNAGG 2 cut(s) 270, 1821
XapI RAATTY 7 cut(s) 694, 772, 1333, 1561, 1618, 2402, 2504
XbaI TCTAGA 2 cut(s) 1169, 2368
XceI RCATGY 2 cut(s) 844, 1457
XhoI CTCGAG 1 cut(s) 2743
XmiI GTMKAC 1 cut(s) 65
XmnI GAANNNNTTC 2 cut(s) 610, 2508
XspI CTAG 9 cut(s) 216, 312, 330, 396, 722, 804, 1170, 2369, 3075
ZrmI AGTACT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.