Rroxscaffold_3G00274760

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
66404780 .. 66414854
10075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00274760.1

Sequence Viewer

Length: 2550 bp
ATGGATGGTTTCTATGACCTGTATGGAATATTGACGGAGTCAACCTCAGAAAGAATGCCTTCCCTTGTTGATCTGCAAGGAACAGCTGTCTCAGATAATGTCAACTGGGAAGCAGTTTTGGTCAATAGAGCTGCCGATGCGAATTTATTGAAACTTGAACAGATGGCCCTAGAAATGGCTGTAAAGTCACGTTCAGATCTTCGGGTTACTGTAAACAGAAATTTGGTGCAAAAACTTGCTCTTTTAGTTGCTAACTCTATGGGTGGACCAGTTGCAAATCCTTACAACATGTTGAAGGCATGGCAAAATCTTAGCCAGAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACAATTGGATTAGCTCGGCATCGTGCATTGTTGTTCAAGGCTTTGGCTGATAGTGTTGGCATCCCATGCCGATTGGTGAAAGGACAACAATACACGGGTTCCAATGATGTAGCAATGAACTTTGTAAAGATTGATGATGGAAGGGAGTATATTGTTGATCTGATGGCTGACCCCGGCACACTTATTCCATCTGATGAAGCTGGATCACATATAGAATATGATGAACCTTACTTTTCTGCCAGTCCTTTGTCTAGAGACATTGACTCTTCCCATGTAGCCTCTTCCAGTAGTGGAATTGAGAGTTCATTTGAAGAACATTCAGACTTTGGGACATTAGACAAAAAATCCAGGTTAAGAAATTATAGTTCTGCAGACAGGGAATCTGAAGAGACAGAAGCCCCGTATTTTCGTGAAAATTTACCCAGACCAACTGAATGTGAGGAGGAATCCAAGATACCGTCAGATGATTTGAGATACTCCTCTGATGTGGAGAAGGCGCTGGTGCAAGAACTTCCAGGAAGGCCAAGTTATACACATGCAAGATCTCCTTCGTGGACTGAAGGTGTTAGCTCTCCTGCAGTTCGGAAAAAGAAAGTTAAGGATGTTTCAAAATACATGATTGTTGCTGCCAAAGAGAATCCAAATTTAGCTCAAAAACTTCATGATGTGTTACTTGAAAGTGGTGTTGTTGCTCCCAGAAATTTGTTTACGGAAATATATCCAGAGCAGTTAGATGTGTCAACCCGAACAGAAGATAAGGGGGGAAATAAGGAGAGGTTTGAAATGAAAAAGAGTAAAGGTCAAGATGATATCAGTTCGACTCACTCTTTGCCTCCACTACCTCAGCACAGGGTGCATTCTAAAGCTAGTCCTTCAGGTCAGCCAGAGCATCTTAAGCCTGTGGAAGGTTTAGGGGTCAGCCTTCCTCTTGATACCAGGGAAGTGGCTGGCCAGAATATCTCATCACAGTCTGAAGCAACTCCAGTTAAATATACAAAAAGTGTGCCTGTTGCTGCAGCAGCCGCAGCCGCAGCAGCTGTTGTTGCATCTTCTATGGTAGTTGCAGTAACAAAGTCAAGCGCTGACTCAAATATTCCTGTAGCAGCTGCTGCAACTGCTACTGCTGCAGCAGTGGTTGCAACAACTGCAGCTGTCAACAAGCAGTATGAGCAGGGAACAAGAAGTGATGGGGATGCAGAAGGTTCTGGTTGTGAACCACATGGCAGTGGGGACCGTGAGCATGATGCTTCGACAGTTGTCTCGGAAGGCGAGAGAGTCTCGGATCGATCGGCAGGTAACGAAAGTACAAGATCTGACATTGGTGATGATGTAGCAGATTGCGAGATTCCATGGGAGGATATCACCTTGGGTGAACGAATTGGACTTGGATCATATGGGGAGGTCTATCATGGAGACTGGCATGGGACGGAGGTTGCTGTTAAGAGGTTTCTAGACCAAGATTTTTTGGGTGAATCACTTGATGAATTCAGAAGTGAGGTTCGGATAATGAAAAGACTCAGACATCCCAATGTTGTTCTCTTCATGGGAGCAATAACTCGTGCTCCAAATCTTTCCATTGTTACAGAATTTCTTCCAAGAGGTAGTTTATATAGGTTGTTACACCGGCCTAACAATCAATTAGATGAGCGAAGGCGCTTGAGGATGGCTCTTGATGCTGCTCGGGGAATGAATTACTTGCATAACTGCACTCCAGTAATAGTACACCGTGATTTGAAGTCTCCAAACCTTCTTGTTGATAAGAATTGGGTTGTAAAGGTCTGTGATTTTGGATTATCAAGAATGAAGAACAGCACATTTCTCTCCTCGAGGTCCACTGCAGGGACGGCTGAATGGATGGCTCCAGAAGTGCTAAGAAACGAACCTTCAGATGAAAAGTGCGATGTTTATAGCTATGGGGTCATATTGTGGGAGCTCTCTACAATGCAACAGCCATGGGGAGGAATGAACCCAATGCAAGTCGTTGGTGCAGTTGGATTTCAACATCGCCGTCTTGATATTCCAAATGATATTGATCCTGCAATTGCAGATCTTATTGAAAAATGCTGGCAGACAGATCCAAAATTGAGACCCTCATTTGCTGAGATCATGGCTATCCTGAAGCCGTTGCAGAAGCCTATAAGTAGTTCTGCAGTACCTAGATCTACTGCACAAAGGCCATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0035556 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

849

Amino Acids

92.94

Weight (kDa)

5.5

Isoelectric Point (pI)

47.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 1 - 184 1.5e-65 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 576 - 827 1.7e-66 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 578 - 825 1.9e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 2191
Acc36I ACCTGC 1 cut(s) 1649
AciI CCGC 2 cut(s) 1389, 1395
AclWI GGATC 5 cut(s) 577, 1656, 1762, 2393, 2435
AcoI YGGCCR 1 cut(s) 1315
AcsI RAATTY 7 cut(s) 142, 220, 781, 1009, 1066, 1850, 1952
AcuI CTGAAG 6 cut(s) 771, 945, 1224, 1359, 2235, 2504
AdeI CACNNNGTG 1 cut(s) 1219
AfaI GTAC 3 cut(s) 1672, 2088, 2520
AfeI AGCGCT 1 cut(s) 1447
AfiI CCNNNNNNNGG 4 cut(s) 175, 1271, 2205, 2324
AflII CTTAAG 1 cut(s) 1259
AflIII ACRYGT 1 cut(s) 288
AjnI CCWGG 3 cut(s) 713, 880, 1301
Alw21I GWGCWC 2 cut(s) 1930, 2301
Alw26I GTCTC 8 cut(s) 94, 615, 749, 1630, 1648, 1773, 2109, 2446
AlwI GGATC 5 cut(s) 577, 1656, 1762, 2393, 2435
AlwNI CAGNNNCTG 3 cut(s) 322, 1403, 1475
Ama87I CYCGRG 2 cut(s) 2046, 2191
Aor51HI AGCGCT 1 cut(s) 1447
AoxI GGCC 5 cut(s) 165, 887, 1315, 1991, 2540
ApoI RAATTY 7 cut(s) 142, 220, 781, 1009, 1066, 1850, 1952
ArsI GACNNNNNNTTYG 2 cut(s) 1177, 1209
Asp700I GAANNNNTTC 2 cut(s) 58, 1956
AspLEI GCGC 3 cut(s) 865, 1448, 2022
AspS9I GGNCC 4 cut(s) 166, 266, 1597, 2196
AsuC2I CCSGG 1 cut(s) 540
AsuHPI GGTGA 5 cut(s) 454, 1700, 1720, 1748, 1847
AvaI CYCGRG 2 cut(s) 2046, 2191
AvaII GGWCC 3 cut(s) 266, 1597, 2196
BalI TGGCCA 1 cut(s) 1317
BanII GRGCYC 1 cut(s) 2301
BauI CACGAG 1 cut(s) 1923
Bbv12I GWGCWC 2 cut(s) 1930, 2301
BbvCI CCTCAGC 1 cut(s) 1209
BccI CCATC 7 cut(s) 157, 497, 523, 562, 1547, 2023, 2215
BceAI ACGGC 3 cut(s) 2226, 2358, 2473
BciT130I CCWGG 3 cut(s) 715, 882, 1303
BcnI CCSGG 1 cut(s) 540
BcoDI GTCTC 8 cut(s) 94, 615, 749, 1630, 1648, 1773, 2109, 2446
BfaI CTAG 5 cut(s) 170, 618, 1233, 1817, 2523
BfmI CTRYAG 8 cut(s) 735, 942, 1380, 1464, 1491, 1512, 2202, 2514
BfoI RGCGCY 3 cut(s) 866, 1449, 2023
BfrI CTTAAG 1 cut(s) 1259
BfuAI ACCTGC 1 cut(s) 1649
BglII AGATCT 5 cut(s) 196, 908, 1676, 2413, 2525
Bme1390I CCNGG 4 cut(s) 540, 715, 882, 1303
Bme18I GGWCC 3 cut(s) 266, 1597, 2196
BmeT110I CYCGRG 2 cut(s) 2046, 2191
BmgT120I GGNCC 4 cut(s) 166, 266, 1597, 2196
BmiI GGNNCC 3 cut(s) 466, 1598, 2226
BmrFI CCNGG 4 cut(s) 540, 715, 882, 1303
BmrI ACTGGG 1 cut(s) 115
BmsI GCATC 8 cut(s) 127, 394, 435, 1264, 1421, 1549, 1600, 2029
BmuI ACTGGG 1 cut(s) 115
BoxI GACNNNNGTC 1 cut(s) 1622
BplI GAGNNNNNCTC 6 cut(s) 29, 61, 1628, 1660, 2017, 2049
BpmI CTGGAG 3 cut(s) 1332, 2061, 2211
Bpu10I CCTNAGC 1 cut(s) 1209
BpuEI CTTGAG 1 cut(s) 2044
BpuMI CCSGG 1 cut(s) 540
Bsa29I ATCGAT 1 cut(s) 1651
BsaBI GATNNNNATC 1 cut(s) 2397
BsaI GGTCTC 1 cut(s) 2446
BsaJI CCNNGG 5 cut(s) 538, 1302, 1715, 1731, 2318
BsaXI ACNNNNNCTCC 2 cut(s) 1912, 1942
Bsc4I CCNNNNNNNGG 4 cut(s) 175, 1271, 2205, 2324
Bse118I RCCGGY 1 cut(s) 1989
Bse1I ACTGG 7 cut(s) 110, 269, 606, 651, 1349, 1787, 2078
Bse3DI GCAATG 1 cut(s) 486
Bse8I GATNNNNATC 1 cut(s) 2397
BseBI CCWGG 3 cut(s) 715, 882, 1303
BseCI ATCGAT 1 cut(s) 1651
BseDI CCNNGG 5 cut(s) 538, 1302, 1715, 1731, 2318
BseGI GGATG 8 cut(s) 10, 426, 973, 1564, 1888, 2034, 2226, 2543
BseJI GATNNNNATC 1 cut(s) 2397
BseLI CCNNNNNNNGG 4 cut(s) 175, 1271, 2205, 2324
BseMI GCAATG 1 cut(s) 486
BseMII CTCAG 5 cut(s) 60, 105, 1223, 1897, 2457
BseNI ACTGG 7 cut(s) 110, 269, 606, 651, 1349, 1787, 2078
BseRI GAGGAG 3 cut(s) 821, 835, 2179
BsgI GTGCAG 3 cut(s) 2056, 2373, 2517
Bsh1285I CGRYCG 1 cut(s) 1655
BshFI GGCC 5 cut(s) 167, 889, 1317, 1993, 2542
BshVI ATCGAT 1 cut(s) 1651
BsiEI CGRYCG 1 cut(s) 1655
BsiHKAI GWGCWC 2 cut(s) 1930, 2301
BsiHKCI CYCGRG 2 cut(s) 2046, 2191
BsiSI CCGG 2 cut(s) 540, 1990
BslFI GGGAC 4 cut(s) 709, 1610, 1804, 2221
BslI CCNNNNNNNGG 4 cut(s) 175, 1271, 2205, 2324
BsmAI GTCTC 8 cut(s) 94, 615, 749, 1630, 1648, 1773, 2109, 2446
BsmFI GGGAC 4 cut(s) 709, 1610, 1804, 2221
BsmI GAATGC 2 cut(s) 60, 1222
BsnI GGCC 5 cut(s) 167, 889, 1317, 1993, 2542
Bso31I GGTCTC 1 cut(s) 2446
BsoBI CYCGRG 2 cut(s) 2046, 2191
Bsp1286I GDGCHC 2 cut(s) 1930, 2301
Bsp19I CCATGG 2 cut(s) 1715, 2318
BspACI CCGC 2 cut(s) 1389, 1395
BspANI GGCC 5 cut(s) 167, 889, 1317, 1993, 2542
BspCNI CTCAG 5 cut(s) 59, 104, 1222, 1896, 2458
BspDI ATCGAT 1 cut(s) 1651
BspHI TCATGA 1 cut(s) 1027
BspLI GGNNCC 3 cut(s) 466, 1598, 2226
BspMAI CTGCAG 7 cut(s) 739, 946, 1384, 1495, 1516, 2206, 2518
BspMI ACCTGC 1 cut(s) 1649
BspPI GGATC 5 cut(s) 577, 1656, 1762, 2393, 2435
BspTI CTTAAG 1 cut(s) 1259
BspTNI GGTCTC 1 cut(s) 2446
BsrDI GCAATG 1 cut(s) 486
BsrFI RCCGGY 1 cut(s) 1989
BsrI ACTGG 7 cut(s) 110, 269, 606, 651, 1349, 1787, 2078
BssAI RCCGGY 1 cut(s) 1989
BssECI CCNNGG 5 cut(s) 538, 1302, 1715, 1731, 2318
BssSI CACGAG 1 cut(s) 1923
BssT1I CCWWGG 3 cut(s) 1715, 1731, 2318
Bst2BI CACGAG 1 cut(s) 1923
Bst2UI CCWGG 3 cut(s) 715, 882, 1303
Bst4CI ACNGT 6 cut(s) 211, 825, 1335, 1601, 1621, 2093
Bst6I CTCTTC 4 cut(s) 637, 652, 747, 1910
BstAFI CTTAAG 1 cut(s) 1259
BstAPI GCANNNNNTGC 5 cut(s) 432, 1219, 1475, 1502, 1511
BstC8I GCNNGC 2 cut(s) 1315, 2432
BstDEI CTNAG 7 cut(s) 46, 91, 311, 1209, 1883, 2237, 2466
BstDSI CCRYGG 2 cut(s) 1715, 2318
BstENI CCTNNNNNAGG 1 cut(s) 1269
BstF5I GGATG 8 cut(s) 10, 426, 973, 1564, 1888, 2034, 2226, 2543
BstH2I RGCGCY 3 cut(s) 866, 1449, 2023
BstHHI GCGC 3 cut(s) 865, 1448, 2022
BstMAI GTCTC 8 cut(s) 94, 615, 749, 1630, 1648, 1773, 2109, 2446
BstMCI CGRYCG 1 cut(s) 1655
BstNI CCWGG 3 cut(s) 715, 882, 1303
BstNSI RCATGY 2 cut(s) 292, 905
BstPAI GACNNNNGTC 1 cut(s) 1622
BstSCI CCNGG 4 cut(s) 538, 713, 880, 1301
BstSFI CTRYAG 8 cut(s) 735, 942, 1380, 1464, 1491, 1512, 2202, 2514
BstX2I RGATCY 6 cut(s) 196, 908, 1676, 2413, 2440, 2525
BstXI CCANNNNNNTGG 1 cut(s) 1309
BstYI RGATCY 6 cut(s) 196, 908, 1676, 2413, 2440, 2525
Bsu15I ATCGAT 1 cut(s) 1651
BsuRI GGCC 5 cut(s) 167, 889, 1317, 1993, 2542
BsuTUI ATCGAT 1 cut(s) 1651
BtgI CCRYGG 2 cut(s) 1715, 2318
BtgZI GCGATG 2 cut(s) 2280, 2354
BtsCI GGATG 8 cut(s) 10, 426, 973, 1564, 1888, 2034, 2226, 2543
BtsI GCAGTG 3 cut(s) 1503, 1597, 2199
BtsIMutI CAGTG 3 cut(s) 1503, 1597, 2199
BveI ACCTGC 1 cut(s) 1649
Cac8I GCNNGC 2 cut(s) 1315, 2432
CaiI CAGNNNCTG 3 cut(s) 322, 1403, 1475
CciI TCATGA 1 cut(s) 1027
CfoI GCGC 3 cut(s) 865, 1448, 2022
Cfr10I RCCGGY 1 cut(s) 1989
Cfr13I GGNCC 4 cut(s) 166, 266, 1597, 2196
ClaI ATCGAT 1 cut(s) 1651
Csp6I GTAC 3 cut(s) 1671, 2087, 2519
CviQI GTAC 3 cut(s) 1671, 2087, 2519
DdeI CTNAG 7 cut(s) 46, 91, 311, 1209, 1883, 2237, 2466
DraIII CACNNNGTG 1 cut(s) 1219
EaeI YGGCCR 1 cut(s) 1315
Eam1104I CTCTTC 4 cut(s) 637, 652, 747, 1910
EarI CTCTTC 4 cut(s) 637, 652, 747, 1910
Ecl136II GAGCTC 1 cut(s) 2299
Eco130I CCWWGG 3 cut(s) 1715, 1731, 2318
Eco24I GRGCYC 1 cut(s) 2301
Eco31I GGTCTC 1 cut(s) 2446
Eco32I GATATC 2 cut(s) 1177, 1726
Eco47I GGWCC 3 cut(s) 266, 1597, 2196
Eco47III AGCGCT 1 cut(s) 1447
Eco53kI GAGCTC 1 cut(s) 2299
Eco57I CTGAAG 6 cut(s) 771, 945, 1224, 1359, 2235, 2504
Eco88I CYCGRG 2 cut(s) 2046, 2191
EcoICRI GAGCTC 1 cut(s) 2299
EcoNI CCTNNNNNAGG 1 cut(s) 1269
EcoRI GAATTC 1 cut(s) 1850
EcoRII CCWGG 3 cut(s) 713, 880, 1301
EcoRV GATATC 2 cut(s) 1177, 1726
EcoT14I CCWWGG 3 cut(s) 1715, 1731, 2318
EcoT38I GRGCYC 1 cut(s) 2301
ErhI CCWWGG 3 cut(s) 1715, 1731, 2318
FalI AAGNNNNNCTT 6 cut(s) 43, 75, 318, 350, 898, 930
FaqI GGGAC 4 cut(s) 709, 1610, 1804, 2221
FauNDI CATATG 1 cut(s) 1759
FokI GGATG 8 cut(s) 17, 413, 980, 1571, 1875, 2041, 2233, 2530
FriOI GRGCYC 1 cut(s) 2301
FspBI CTAG 5 cut(s) 170, 618, 1233, 1817, 2523
GlaI GCGC 3 cut(s) 864, 1447, 2021
GsuI CTGGAG 3 cut(s) 1332, 2061, 2211
HaeII RGCGCY 3 cut(s) 866, 1449, 2023
HaeIII GGCC 5 cut(s) 167, 889, 1317, 1993, 2542
HapII CCGG 2 cut(s) 540, 1990
HhaI GCGC 3 cut(s) 865, 1448, 2022
Hin6I GCGC 3 cut(s) 863, 1446, 2020
HinP1I GCGC 3 cut(s) 863, 1446, 2020
HincII GTYRAC 4 cut(s) 42, 103, 1107, 1522
HindII GTYRAC 4 cut(s) 42, 103, 1107, 1522
HpaII CCGG 2 cut(s) 540, 1990
HphI GGTGA 5 cut(s) 454, 1700, 1720, 1748, 1847
HpyCH4III ACNGT 6 cut(s) 211, 825, 1335, 1601, 1621, 2093
HpyCH4IV ACGT 1 cut(s) 190
HpyF3I CTNAG 7 cut(s) 46, 91, 311, 1209, 1883, 2237, 2466
HpySE526I ACGT 1 cut(s) 190
HspAI GCGC 3 cut(s) 863, 1446, 2020
LmnI GCTCC 5 cut(s) 1063, 1913, 1933, 2230, 2296
LweI GCATC 8 cut(s) 127, 394, 435, 1264, 1421, 1549, 1600, 2029
MaeI CTAG 5 cut(s) 170, 618, 1233, 1817, 2523
MaeII ACGT 1 cut(s) 190
MaeIII GTNAC 7 cut(s) 186, 205, 1035, 1432, 1661, 1945, 1983
MfeI CAATTG 2 cut(s) 369, 2406
MflI RGATCY 6 cut(s) 196, 908, 1676, 2413, 2440, 2525
MhlI GDGCHC 2 cut(s) 1930, 2301
MlsI TGGCCA 1 cut(s) 1317
MluNI TGGCCA 1 cut(s) 1317
MlyI GAGTC 7 cut(s) 47, 328, 623, 1180, 1445, 1650, 1875
MmeI TCCRAC 1 cut(s) 2338
Mox20I TGGCCA 1 cut(s) 1317
MroXI GAANNNNTTC 2 cut(s) 58, 1956
MscI TGGCCA 1 cut(s) 1317
MseI TTAA 5 cut(s) 719, 963, 1260, 1353, 1806
MslI CAYNNNNRTG 2 cut(s) 1590, 1893
Msp20I TGGCCA 1 cut(s) 1317
MspA1I CMGCKG 4 cut(s) 86, 1403, 1472, 1517
MspCI CTTAAG 1 cut(s) 1259
MspI CCGG 2 cut(s) 540, 1990
MspR9I CCNGG 4 cut(s) 540, 715, 882, 1303
MunI CAATTG 2 cut(s) 369, 2406
Mva1269I GAATGC 2 cut(s) 60, 1222
MvaI CCWGG 3 cut(s) 715, 882, 1303
NciI CCSGG 1 cut(s) 540
NcoI CCATGG 2 cut(s) 1715, 2318
NdeI CATATG 1 cut(s) 1759
NlaIV GGNNCC 3 cut(s) 466, 1598, 2226
NmeAIII GCCGAG 1 cut(s) 361
NmuCI GTSAC 1 cut(s) 186
NspI RCATGY 2 cut(s) 292, 905
PaeR7I CTCGAG 1 cut(s) 2191
PagI TCATGA 1 cut(s) 1027
PciI ACATGT 1 cut(s) 288
PctI GAATGC 2 cut(s) 60, 1222
PdmI GAANNNNTTC 2 cut(s) 58, 1956
PfeI GAWTC 5 cut(s) 746, 812, 1003, 1711, 1838
PflFI GACNNNGTC 1 cut(s) 37
PfoI TCCNGGA 1 cut(s) 880
Ple19I CGATCG 1 cut(s) 1655
PleI GAGTC 7 cut(s) 46, 327, 623, 1180, 1445, 1649, 1875
PpsI GAGTC 7 cut(s) 46, 327, 623, 1180, 1445, 1649, 1875
PscI ACATGT 1 cut(s) 288
PshAI GACNNNNGTC 1 cut(s) 1622
Psp124BI GAGCTC 1 cut(s) 2301
Psp6I CCWGG 3 cut(s) 713, 880, 1301
PspGI CCWGG 3 cut(s) 713, 880, 1301
PspN4I GGNNCC 3 cut(s) 466, 1598, 2226
PspPI GGNCC 4 cut(s) 166, 266, 1597, 2196
PspXI VCTCGAGB 1 cut(s) 2191
PstI CTGCAG 7 cut(s) 739, 946, 1384, 1495, 1516, 2206, 2518
PstNI CAGNNNCTG 3 cut(s) 322, 1403, 1475
PsuI RGATCY 6 cut(s) 196, 908, 1676, 2413, 2440, 2525
PsyI GACNNNGTC 1 cut(s) 37
PvuI CGATCG 1 cut(s) 1655
PvuII CAGCTG 4 cut(s) 86, 1403, 1472, 1517
RsaI GTAC 3 cut(s) 1672, 2088, 2520
RsaNI GTAC 3 cut(s) 1671, 2087, 2519
RseI CAYNNNNRTG 2 cut(s) 1590, 1893
SacI GAGCTC 1 cut(s) 2301
SaqAI TTAA 5 cut(s) 719, 963, 1260, 1353, 1806
Sau96I GGNCC 4 cut(s) 166, 266, 1597, 2196
SchI GAGTC 7 cut(s) 47, 328, 623, 1180, 1445, 1650, 1875
ScrFI CCNGG 4 cut(s) 540, 715, 882, 1303
SduI GDGCHC 2 cut(s) 1930, 2301
SfaNI GCATC 8 cut(s) 127, 394, 435, 1264, 1421, 1549, 1600, 2029
SfcI CTRYAG 8 cut(s) 735, 942, 1380, 1464, 1491, 1512, 2202, 2514
Sfr274I CTCGAG 1 cut(s) 2191
SinI GGWCC 3 cut(s) 266, 1597, 2196
SlaI CTCGAG 1 cut(s) 2191
SmiMI CAYNNNNRTG 2 cut(s) 1590, 1893
SmlI CTYRAG 3 cut(s) 1259, 2023, 2191
SmoI CTYRAG 3 cut(s) 1259, 2023, 2191
SsiI CCGC 2 cut(s) 1389, 1395
SspI AATATT 2 cut(s) 30, 1459
SspMI CTAG 5 cut(s) 170, 618, 1233, 1817, 2523
SstI GAGCTC 1 cut(s) 2301
StyD4I CCNGG 4 cut(s) 538, 713, 880, 1301
StyI CCWWGG 3 cut(s) 1715, 1731, 2318
TaaI ACNGT 6 cut(s) 211, 825, 1335, 1601, 1621, 2093
TaiI ACGT 1 cut(s) 193
TaqI TCGA 4 cut(s) 1184, 1616, 1651, 2192
TatI WGTACW 2 cut(s) 1670, 2086
TauI GCSGC 2 cut(s) 1391, 1397
TfiI GAWTC 5 cut(s) 746, 812, 1003, 1711, 1838
Tru1I TTAA 5 cut(s) 719, 963, 1260, 1353, 1806
Tru9I TTAA 5 cut(s) 719, 963, 1260, 1353, 1806
TscAI CASTG 3 cut(s) 1503, 1597, 2206
TseFI GTSAC 1 cut(s) 186
Tsp45I GTSAC 1 cut(s) 186
TspGWI ACGGA 3 cut(s) 50, 1091, 1808
TspRI CASTG 3 cut(s) 1503, 1597, 2206
Tth111I GACNNNGTC 1 cut(s) 37
Vha464I CTTAAG 1 cut(s) 1259
VpaK11BI GGWCC 3 cut(s) 266, 1597, 2196
XagI CCTNNNNNAGG 1 cut(s) 1269
XapI RAATTY 7 cut(s) 142, 220, 781, 1009, 1066, 1850, 1952
XbaI TCTAGA 2 cut(s) 617, 1816
XceI RCATGY 2 cut(s) 292, 905
XhoI CTCGAG 1 cut(s) 2191
XmnI GAANNNNTTC 2 cut(s) 58, 1956
XspI CTAG 5 cut(s) 170, 618, 1233, 1817, 2523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.