Clp protease-related protein At4g12060
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G25370 |
| fragaria_vesca | FvH4_7g00050 |
| malus_domestica | MD00G1055600.v1.1 MD02G1320000.v1.1 |
| prunus_persica | Prupe.2G002100_v2.0.a1 |
| pyrus_communis | pycom07g00100 |
| rosa_chinensis | RchiOBHm_Chr1g0313031 RchiOBHm_Chr1g0313191 |
| rosa_laevigata | RLG00000030817 |
| rosa_multiflora | Rmu_co8509777.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00332400 |
| rosa_rugosa | RorugPtG0001300.1 |
| rosa_samantha | Rh1AG000400 Rh1AG001500 Rh1CG003500 Rh1CG006100 Rh1DG001400 |
| rosa_wichuraiana | Rw1G000050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 276 |
| AcoI | YGGCCR | 1 cut(s) | 198 |
| AcsI | RAATTY | 1 cut(s) | 159 |
| AcuI | CTGAAG | 1 cut(s) | 202 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 192, 341, 342 |
| AluBI | AGCT | 2 cut(s) | 29, 325 |
| AluI | AGCT | 2 cut(s) | 29, 325 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApoI | RAATTY | 1 cut(s) | 159 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 354 |
| AspLEI | GCGC | 2 cut(s) | 80, 143 |
| AspS9I | GGNCC | 2 cut(s) | 273, 345 |
| AsuHPI | GGTGA | 1 cut(s) | 33 |
| AsuII | TTCGAA | 1 cut(s) | 157 |
| AvaII | GGWCC | 2 cut(s) | 273, 345 |
| BanII | GRGCYC | 1 cut(s) | 266 |
| BccI | CCATC | 1 cut(s) | 209 |
| BceAI | ACGGC | 1 cut(s) | 213 |
| Bme18I | GGWCC | 2 cut(s) | 273, 345 |
| BmgT120I | GGNCC | 2 cut(s) | 273, 345 |
| BmiI | GGNNCC | 1 cut(s) | 346 |
| BmrI | ACTGGG | 1 cut(s) | 264 |
| BmsI | GCATC | 3 cut(s) | 14, 65, 199 |
| BmuI | ACTGGG | 1 cut(s) | 264 |
| Bpu14I | TTCGAA | 1 cut(s) | 157 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 192, 341, 342 |
| Bse1I | ACTGG | 1 cut(s) | 259 |
| BseGI | GGATG | 1 cut(s) | 5 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 192, 341, 342 |
| BseMII | CTCAG | 1 cut(s) | 39 |
| BseNI | ACTGG | 1 cut(s) | 259 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BslFI | GGGAC | 1 cut(s) | 358 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 192, 341, 342 |
| BsmFI | GGGAC | 1 cut(s) | 358 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bsp119I | TTCGAA | 1 cut(s) | 157 |
| Bsp1286I | GDGCHC | 1 cut(s) | 266 |
| BspACI | CCGC | 1 cut(s) | 276 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BspCNI | CTCAG | 1 cut(s) | 38 |
| BspLI | GGNNCC | 1 cut(s) | 346 |
| BspQI | GCTCTTC | 1 cut(s) | 254 |
| BspT104I | TTCGAA | 1 cut(s) | 157 |
| BsrI | ACTGG | 1 cut(s) | 259 |
| Bst4CI | ACNGT | 1 cut(s) | 211 |
| Bst6I | CTCTTC | 3 cut(s) | 91, 221, 254 |
| BstBI | TTCGAA | 1 cut(s) | 157 |
| BstDEI | CTNAG | 1 cut(s) | 25 |
| BstF5I | GGATG | 1 cut(s) | 5 |
| BstHHI | GCGC | 2 cut(s) | 80, 143 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtgZI | GCGATG | 1 cut(s) | 187 |
| BtsCI | GGATG | 1 cut(s) | 5 |
| CfoI | GCGC | 2 cut(s) | 80, 143 |
| Cfr13I | GGNCC | 2 cut(s) | 273, 345 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviAII | CATG | 2 cut(s) | 178, 361 |
| CviJI | RGCY | 9 cut(s) | 29, 148, 182, 200, 222, 238, 264, 305, 325 |
| CviKI_1 | RGCY | 9 cut(s) | 29, 148, 182, 200, 222, 238, 264, 305, 325 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DdeI | CTNAG | 1 cut(s) | 25 |
| EaeI | YGGCCR | 1 cut(s) | 198 |
| Eam1104I | CTCTTC | 3 cut(s) | 91, 221, 254 |
| EarI | CTCTTC | 3 cut(s) | 91, 221, 254 |
| EciI | GGCGGA | 1 cut(s) | 265 |
| Eco24I | GRGCYC | 1 cut(s) | 266 |
| Eco47I | GGWCC | 2 cut(s) | 273, 345 |
| Eco57I | CTGAAG | 1 cut(s) | 202 |
| EcoRI | GAATTC | 1 cut(s) | 159 |
| EcoT38I | GRGCYC | 1 cut(s) | 266 |
| FaeI | CATG | 2 cut(s) | 181, 364 |
| FaiI | YATR | 4 cut(s) | 120, 179, 302, 362 |
| FaqI | GGGAC | 1 cut(s) | 358 |
| FatI | CATG | 2 cut(s) | 177, 360 |
| FriOI | GRGCYC | 1 cut(s) | 266 |
| GlaI | GCGC | 2 cut(s) | 79, 142 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| HhaI | GCGC | 2 cut(s) | 80, 143 |
| Hin1II | CATG | 2 cut(s) | 181, 364 |
| Hin6I | GCGC | 2 cut(s) | 78, 141 |
| HinP1I | GCGC | 2 cut(s) | 78, 141 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HphI | GGTGA | 1 cut(s) | 33 |
| Hpy188I | TCNGA | 2 cut(s) | 165, 195 |
| HpyAV | CCTTC | 4 cut(s) | 55, 91, 107, 388 |
| HpyCH4III | ACNGT | 1 cut(s) | 211 |
| HpyCH4IV | ACGT | 1 cut(s) | 108 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| HpyF3I | CTNAG | 1 cut(s) | 25 |
| HpySE526I | ACGT | 1 cut(s) | 108 |
| Hsp92II | CATG | 2 cut(s) | 181, 364 |
| HspAI | GCGC | 2 cut(s) | 78, 141 |
| LguI | GCTCTTC | 1 cut(s) | 254 |
| LmnI | GCTCC | 1 cut(s) | 98 |
| LpnPI | CCDG | 6 cut(s) | 115, 137, 229, 240, 292, 327 |
| LweI | GCATC | 3 cut(s) | 14, 65, 199 |
| MaeII | ACGT | 1 cut(s) | 108 |
| MboII | GAAGA | 3 cut(s) | 78, 208, 271 |
| MhlI | GDGCHC | 1 cut(s) | 266 |
| MluCI | AATT | 2 cut(s) | 159, 308 |
| MmeI | TCCRAC | 1 cut(s) | 361 |
| MnlI | CCTC | 6 cut(s) | 22, 64, 224, 233, 370, 391 |
| MroXI | GAANNNNTTC | 1 cut(s) | 354 |
| MseI | TTAA | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NlaIII | CATG | 2 cut(s) | 181, 364 |
| NlaIV | GGNNCC | 1 cut(s) | 346 |
| NmeAIII | GCCGAG | 1 cut(s) | 117 |
| NspV | TTCGAA | 1 cut(s) | 157 |
| PciSI | GCTCTTC | 1 cut(s) | 254 |
| PdmI | GAANNNNTTC | 1 cut(s) | 354 |
| PspN4I | GGNNCC | 1 cut(s) | 346 |
| PspPI | GGNCC | 2 cut(s) | 273, 345 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| SapI | GCTCTTC | 1 cut(s) | 254 |
| SaqAI | TTAA | 1 cut(s) | 327 |
| Sau96I | GGNCC | 2 cut(s) | 273, 345 |
| SduI | GDGCHC | 1 cut(s) | 266 |
| SetI | ASST | 7 cut(s) | 14, 31, 56, 111, 126, 327, 381 |
| SfaNI | GCATC | 3 cut(s) | 14, 65, 199 |
| SfuI | TTCGAA | 1 cut(s) | 157 |
| SinI | GGWCC | 2 cut(s) | 273, 345 |
| Sse9I | AATT | 2 cut(s) | 159, 308 |
| SsiI | CCGC | 1 cut(s) | 276 |
| TaaI | ACNGT | 1 cut(s) | 211 |
| TaiI | ACGT | 1 cut(s) | 111 |
| TaqI | TCGA | 1 cut(s) | 157 |
| TaqII | GACCGA | 1 cut(s) | 362 |
| TasI | AATT | 2 cut(s) | 159, 308 |
| TatI | WGTACW | 1 cut(s) | 174 |
| Tru1I | TTAA | 1 cut(s) | 327 |
| Tru9I | TTAA | 1 cut(s) | 327 |
| VpaK11BI | GGWCC | 2 cut(s) | 273, 345 |
| XapI | RAATTY | 1 cut(s) | 159 |
| XmnI | GAANNNNTTC | 1 cut(s) | 354 |