Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0009625

Physical Location & Seq

Genomic Coordinates Reverse (-)

18596865 .. 18605384

Gene Structure 8520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g16180.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGACATCAATCATTTTGTTGGGCTCCTTTCATCATACAAGGTTATTGCATGTTCGTCGGGAAGCAAATCAGACTCAAAACTCAAAATTTGCAGCCTACCAAAGTACACAGATCACACTCATTGTCATCTGTCACAACCTAACATATGCTTTTGAGCAAAAACATTCAGAGGAAAAAAAGAAGAAAAAAGTTTCTTTCTTTTTCTCTGTGAAAAAGAAATCAAAAATGGCGCTCTCACGGCTTCGCCACCCAGTGATCTCCCGCGCGCCGTTTCTCCTGAGAGCTCGACTTCTCTCCTCGTCCACCAGATCACTCACTCGTACTTTCAGTGTGCAAAATTCTGCTGAGCTTGGTGATGATATGCTGTTAAGGCCAGCAACTTTGTCCATGCTCACTGGAGTTCATGATAAACCATCAAAGCTGAAGCCTTTGACGGGTGTCAAGTATTATTCAACTCAAGATCCTTTGCATACTGTCATTGGGATGCCGGCGTTGTCTCCTACAATGACTCAAGGTAACATTGCAAAGTGGTGGAAGAAAGAAGGAGACAAGATTGAACCGGGCGACATACTATGTGAAATTGAAACTGACAAAGCTACTATTGAATTTGAAAGTCTTGAAGAAGGGTTTCTAGCCAAGATATTGGCACCTGAAGGTTCAAAAGATGTGCCTGTGGGACAGCCTATTGCAATAACGGTTGAGGATGCAGATGATATCCAAAACCTCCCTGCTAATGTGGTCGGTGGATCTGAGGTCAAAGAGGATATACCAGCACATCAGAATGTCAGAAAGGAAGAGGGGGTACAAGATACAAGTTCTGTGGGCATAAACACATCAGAACTTCCTCCTCACATTGTCATTGAAATGCCAGCTTTATCACCAACAATGAGCCAGGGAAACATTTTTAAGTGGACAAAGAAAGAAGGAGATAAGATAGAAGTGGGTGATATAATATGTGAGATAGAGACAGACAAAGCAACCATTGAATTTGAATGTCTTGAAGAGGGATACTTGGCTAAGATACTAGCGCCAGACGGTACAAAGGATATAGCTGTTGGCCAACCAATTGCAGTAACAGTTGAGGATGCATCTGATCTGGAAACTGTAAAGAATGCTGTTAGCAGTGGTTCACCCGTCAAAGAAGAAACACCAGTCCGTCAGGATACCGGAGATGTAACTAGATCGTTAAAAACCAGTATTTCAAGGATCAGTCCAGCAGCAAAGTTGCTTATTACGGAACATGGATTGGATACATCATTGCTGAAGGCATCAGGTCCTCATGGTACATTGCTGAAAGGGGATGTTTTAGCTGCAATCAAGTCAGGAATAGGGTCTTCAAAAGTTTCATCCAAAGAAAAGACTACTCCATCACCGTCAAAGGCATCAGGTGCTCATGTCCCGAAACCACAAAAGTCAAAACCTTCAAAACAGACAGATTCTTTTGAAGATTTTCCCAATAGTCAAATCCGCAAGGTGATAGCTACTAGACTGCTAGAATCAAAACAAAACATACCGCATTTATATTTATCATCAGATGTTATACTGGACCCTCTTCTTTCTCTTAGAAGGGATCTTATAGAACAGCATAATGTTAAAGTTTCAGTTAATGACATTGTTATCAAAGCTGTAGCTGTTGCACTGAAAAATGTACCGGAAGCAAATGCTTACTGGGATGCTGAAAAAGGAGAAGTCTTTCTTTGTGATTCCGTTGATATATCAATTGCTGTGGCCACTGAGAAGGGCCTGATGACTCCAATTGTGAAGAATGCAGATCAGAAATCAATATCAGCAATCTCTGCAGAGGTCAAGGAACTAGCTGAGAAGGCACGAGCGGGAAAGCTTAAGCCAAATGAATTCCAAGGAGGAACTTTCAGTATTTCAAACTTGGGGATGTTTCCAGTGGATAATTTCTGTGCAATTATAAACCCACCTCAGGCCAGTATCCTTGCTGTTGGCAGAGGCAACAAAGTAGTTGAACCAGTGATTGGAAGCGACGGAATTGAGAGGCCGGCAGTTGTCACCAAAATGAACTTGACATTATCGGCTGATCATCGAGTATTTGACGGAAAAGTTGGAGGTTCGTTCCTCTCAGCTTTACGTTCAAACTTCAGTGATATCCGAAGGCTTCTTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0045254 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

712

Amino Acids

77.23

Weight (kDa)

7.65

Isoelectric Point (pI)

46.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52200 AT3G52200
fragaria_vesca	FvH4_7g18300 FvH4_7g18300 FvH4_7g18300
malus_domestica	MD01G1099700.v1.1 MD07G1166600.v1.1
prunus_persica	Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1
pyrus_communis	pycom01g12680 pycom07g16180
rosa_chinensis	RchiOBHm_Chr1g0361921
rosa_laevigata	RLG00000027686
rosa_multiflora	Rmu_sc0008041.1_g000008
rosa_roxburghii	Rroxscaffold_4G00294620
rosa_rugosa	Rorug01G0292400
rosa_samantha	Rh1AG302900 Rh1CG284300 Rh1DG296100
rosa_wichuraiana	Rw1G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1922
AccB1I	GGYRCC	1 cut(s)	646
AccB7I	CCANNNNNTGG	1 cut(s)	1985
AccBSI	CCGCTC	1 cut(s)	1832
AccII	CGCG	2 cut(s)	264, 266
AciI	CCGC	4 cut(s)	262, 1468, 1514, 1832
AclWI	GGATC	4 cut(s)	455, 754, 1214, 1578
AcoI	YGGCCR	2 cut(s)	1057, 1728
AcsI	RAATTY	5 cut(s)	86, 337, 605, 986, 1853
AcuI	CTGAAG	4 cut(s)	443, 672, 1283, 2092
AdeI	CACNNNGTG	1 cut(s)	253
AfaI	GTAC	6 cut(s)	106, 322, 804, 1039, 1285, 1650
AfiI	CCNNNNNNNGG	3 cut(s)	434, 1933, 1985
AflII	CTTAAG	1 cut(s)	1841
AjnI	CCWGG	1 cut(s)	891
AjuI	GAANNNNNNNTTGG	2 cut(s)	1968, 2000
Alw21I	GWGCWC	2 cut(s)	286, 1393
Alw26I	GTCTC	3 cut(s)	501, 540, 959
AlwI	GGATC	4 cut(s)	455, 754, 1214, 1578
AoxI	GGCC	6 cut(s)	371, 1057, 1728, 1741, 1935, 2006
ApeKI	GCWGC	3 cut(s)	92, 1217, 1310
ApoI	RAATTY	5 cut(s)	86, 337, 605, 986, 1853
Asp700I	GAANNNNTTC	3 cut(s)	627, 1449, 1692
AspLEI	GCGC	4 cut(s)	232, 266, 268, 1030
AspS9I	GGNCC	3 cut(s)	1274, 1546, 1741
AsuC2I	CCSGG	1 cut(s)	561
AsuHPI	GGTGA	7 cut(s)	365, 870, 956, 1122, 1362, 1486, 2011
AvaII	GGWCC	2 cut(s)	1274, 1546
AxyI	CCTNAGG	1 cut(s)	1932
BalI	TGGCCA	2 cut(s)	1059, 1730
BanI	GGYRCC	1 cut(s)	646
BanII	GRGCYC	2 cut(s)	26, 286
BarI	GAAGNNNNNNTAC	2 cut(s)	786, 818
BauI	CACGAG	1 cut(s)	1827
BbsI	GAAGAC	1 cut(s)	1326
Bbv12I	GWGCWC	2 cut(s)	286, 1393
BbvI	GCAGC	3 cut(s)	104, 1229, 1297
BccI	CCATC	2 cut(s)	421, 1375
BceAI	ACGGC	2 cut(s)	253, 254
BcgI	CGANNNNNNTGC	2 cut(s)	38, 72
BciT130I	CCWGG	1 cut(s)	893
BciVI	GTATCC	4 cut(s)	1001, 1156, 1243, 1952
BclI	TGATCA	1 cut(s)	2047
BcnI	CCSGG	1 cut(s)	561
BcoDI	GTCTC	3 cut(s)	501, 540, 959
BfaI	CTAG	6 cut(s)	632, 1025, 1179, 1485, 1493, 1814
BfmI	CTRYAG	2 cut(s)	1626, 1797
BfoI	RGCGCY	2 cut(s)	233, 1031
BfrI	CTTAAG	1 cut(s)	1841
BfuI	GTATCC	4 cut(s)	1001, 1156, 1243, 1952
BisI	GCNGC	3 cut(s)	93, 1218, 1311
BlpI	GCTNAGC	1 cut(s)	345
BlsI	GCNGC	3 cut(s)	94, 1219, 1312
Bme1390I	CCNGG	2 cut(s)	561, 893
Bme18I	GGWCC	2 cut(s)	1274, 1546
BmgT120I	GGNCC	3 cut(s)	1274, 1546, 1741
BmiI	GGNNCC	3 cut(s)	25, 648, 1548
BmrFI	CCNGG	2 cut(s)	561, 893
BmrI	ACTGGG	2 cut(s)	245, 1678
BmsI	GCATC	7 cut(s)	474, 694, 1075, 1097, 1277, 1391, 1663
BmuI	ACTGGG	2 cut(s)	245, 1678
BoxI	GACNNNNGTC	1 cut(s)	437
BpiI	GAAGAC	1 cut(s)	1326
BpmI	CTGGAG	1 cut(s)	417
Bpu1102I	GCTNAGC	1 cut(s)	345
BpuEI	CTTGAG	2 cut(s)	441, 495
BpuMI	CCSGG	1 cut(s)	561
BsaJI	CCNNGG	2 cut(s)	892, 1858
BsaWI	WCCGGW	2 cut(s)	1166, 1651
Bsc4I	CCNNNNNNNGG	3 cut(s)	434, 1933, 1985
Bse118I	RCCGGY	2 cut(s)	487, 2008
Bse1I	ACTGG	9 cut(s)	251, 400, 1151, 1194, 1548, 1673, 1898, 1938, 1979
Bse21I	CCTNAGG	1 cut(s)	1932
Bse3DI	GCAATG	3 cut(s)	519, 1256, 1286
BseBI	CCWGG	1 cut(s)	893
BseDI	CCNNGG	2 cut(s)	892, 1858
BseGI	GGATG	7 cut(s)	489, 709, 1090, 1306, 1346, 1678, 1896
BseLI	CCNNNNNNNGG	3 cut(s)	434, 1933, 1985
BseMI	GCAATG	3 cut(s)	519, 1256, 1286
BseMII	CTCAG	7 cut(s)	269, 336, 741, 1725, 1809, 1946, 2103
BseNI	ACTGG	9 cut(s)	251, 400, 1151, 1194, 1548, 1673, 1898, 1938, 1979
BsePI	GCGCGC	1 cut(s)	264
BseRI	GAGGAG	2 cut(s)	286, 837
BseXI	GCAGC	3 cut(s)	104, 1229, 1297
Bsh1236I	CGCG	2 cut(s)	264, 266
BshFI	GGCC	6 cut(s)	373, 1059, 1730, 1743, 1937, 2008
BshNI	GGYRCC	1 cut(s)	646
BsiHKAI	GWGCWC	2 cut(s)	286, 1393
BsiSI	CCGG	5 cut(s)	488, 560, 1167, 1652, 2009
BslFI	GGGAC	2 cut(s)	690, 1382
BslI	CCNNNNNNNGG	3 cut(s)	434, 1933, 1985
BsmAI	GTCTC	3 cut(s)	501, 540, 959
BsmFI	GGGAC	2 cut(s)	690, 1382
BsmI	GAATGC	2 cut(s)	1117, 1771
BsnI	GGCC	6 cut(s)	373, 1059, 1730, 1743, 1937, 2008
Bsp1286I	GDGCHC	3 cut(s)	26, 286, 1393
Bsp1720I	GCTNAGC	1 cut(s)	345
BspACI	CCGC	4 cut(s)	262, 1468, 1514, 1832
BspANI	GGCC	6 cut(s)	373, 1059, 1730, 1743, 1937, 2008
BspCNI	CTCAG	7 cut(s)	270, 337, 742, 1726, 1810, 1945, 2102
BspFNI	CGCG	2 cut(s)	264, 266
BspHI	TCATGA	1 cut(s)	403
BspLI	GGNNCC	3 cut(s)	25, 648, 1548
BspMAI	CTGCAG	1 cut(s)	1801
BspPI	GGATC	4 cut(s)	455, 754, 1214, 1578
BspT107I	GGYRCC	1 cut(s)	646
BspTI	CTTAAG	1 cut(s)	1841
BsrBI	CCGCTC	1 cut(s)	1832
BsrDI	GCAATG	3 cut(s)	519, 1256, 1286
BsrFI	RCCGGY	2 cut(s)	487, 2008
BsrI	ACTGG	9 cut(s)	251, 400, 1151, 1194, 1548, 1673, 1898, 1938, 1979
BssAI	RCCGGY	2 cut(s)	487, 2008
BssECI	CCNNGG	2 cut(s)	892, 1858
BssHII	GCGCGC	1 cut(s)	264
BssSI	CACGAG	1 cut(s)	1827
BssT1I	CCWWGG	1 cut(s)	1858
Bst2BI	CACGAG	1 cut(s)	1827
Bst2UI	CCWGG	1 cut(s)	893
Bst4CI	ACNGT	6 cut(s)	475, 697, 1037, 1078, 1105, 1374
Bst6I	CTCTTC	3 cut(s)	789, 996, 1557
BstAFI	CTTAAG	1 cut(s)	1841
BstAPI	GCANNNNNTGC	2 cut(s)	1388, 1796
BstC8I	GCNNGC	5 cut(s)	266, 375, 489, 870, 2010
BstDEI	CTNAG	9 cut(s)	278, 345, 750, 1017, 1562, 1734, 1818, 1932, 2089
BstF5I	GGATG	7 cut(s)	489, 709, 1090, 1306, 1346, 1678, 1896
BstFNI	CGCG	2 cut(s)	264, 266
BstH2I	RGCGCY	2 cut(s)	233, 1031
BstHHI	GCGC	4 cut(s)	232, 266, 268, 1030
BstMAI	GTCTC	3 cut(s)	501, 540, 959
BstMWI	GCNNNNNNNGC	5 cut(s)	238, 370, 1388, 1796, 1823
BstNI	CCWGG	1 cut(s)	893
BstNSI	RCATGY	1 cut(s)	53
BstPAI	GACNNNNGTC	1 cut(s)	437
BstSCI	CCNGG	2 cut(s)	559, 891
BstSFI	CTRYAG	2 cut(s)	1626, 1797
BstUI	CGCG	2 cut(s)	264, 266
BstV1I	GCAGC	3 cut(s)	104, 1229, 1297
BstV2I	GAAGAC	1 cut(s)	1326
BstX2I	RGATCY	3 cut(s)	460, 746, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	643
BstYI	RGATCY	3 cut(s)	460, 746, 1570
Bsu36I	CCTNAGG	1 cut(s)	1932
BsuI	GTATCC	4 cut(s)	1001, 1156, 1243, 1952
BsuRI	GGCC	6 cut(s)	373, 1059, 1730, 1743, 1937, 2008
BtsCI	GGATG	7 cut(s)	489, 709, 1090, 1306, 1346, 1678, 1896
BtsI	GCAGTG	1 cut(s)	1129
BtsIMutI	CAGTG	9 cut(s)	258, 334, 393, 1129, 1637, 1731, 1905, 1986, 2116
Cac8I	GCNNGC	5 cut(s)	266, 375, 489, 870, 2010
CciI	TCATGA	1 cut(s)	403
CfoI	GCGC	4 cut(s)	232, 266, 268, 1030
Cfr10I	RCCGGY	2 cut(s)	487, 2008
Cfr13I	GGNCC	3 cut(s)	1274, 1546, 1741
Csp6I	GTAC	6 cut(s)	105, 321, 803, 1038, 1284, 1649
CspCI	CAANNNNNGTGG	4 cut(s)	801, 836, 1707, 1742
CviAII	CATG	6 cut(s)	50, 388, 404, 1241, 1280, 1394
CviQI	GTAC	6 cut(s)	105, 321, 803, 1038, 1284, 1649
DdeI	CTNAG	9 cut(s)	278, 345, 750, 1017, 1562, 1734, 1818, 1932, 2089
DraIII	CACNNNGTG	1 cut(s)	253
EaeI	YGGCCR	2 cut(s)	1057, 1728
Eam1104I	CTCTTC	3 cut(s)	789, 996, 1557
EarI	CTCTTC	3 cut(s)	789, 996, 1557
Ecl136II	GAGCTC	1 cut(s)	284
Eco130I	CCWWGG	1 cut(s)	1858
Eco24I	GRGCYC	2 cut(s)	26, 286
Eco32I	GATATC	2 cut(s)	715, 2116
Eco47I	GGWCC	2 cut(s)	1274, 1546
Eco53kI	GAGCTC	1 cut(s)	284
Eco57I	CTGAAG	4 cut(s)	443, 672, 1283, 2092
Eco81I	CCTNAGG	1 cut(s)	1932
EcoICRI	GAGCTC	1 cut(s)	284
EcoO109I	RGGNCCY	2 cut(s)	1274, 1741
EcoRI	GAATTC	1 cut(s)	1853
EcoRII	CCWGG	1 cut(s)	891
EcoRV	GATATC	2 cut(s)	715, 2116
EcoT14I	CCWWGG	1 cut(s)	1858
EcoT22I	ATGCAT	1 cut(s)	1090
EcoT38I	GRGCYC	2 cut(s)	26, 286
ErhI	CCWWGG	1 cut(s)	1858
FaeI	CATG	6 cut(s)	53, 391, 407, 1244, 1283, 1397
FalI	AAGNNNNNCTT	2 cut(s)	1680, 1712
FaqI	GGGAC	2 cut(s)	690, 1382
FatI	CATG	6 cut(s)	49, 387, 403, 1240, 1279, 1393
FauI	CCCGC	2 cut(s)	269, 1825
FauNDI	CATATG	1 cut(s)	145
FbaI	TGATCA	1 cut(s)	2047
Fnu4HI	GCNGC	3 cut(s)	93, 1218, 1311
FokI	GGATG	7 cut(s)	496, 716, 1097, 1313, 1333, 1685, 1903
FriOI	GRGCYC	2 cut(s)	26, 286
Fsp4HI	GCNGC	3 cut(s)	93, 1218, 1311
FspBI	CTAG	6 cut(s)	632, 1025, 1179, 1485, 1493, 1814
GlaI	GCGC	4 cut(s)	231, 265, 267, 1029
GluI	GCNGC	3 cut(s)	93, 1218, 1311
GsuI	CTGGAG	1 cut(s)	417
HaeII	RGCGCY	2 cut(s)	233, 1031
HaeIII	GGCC	6 cut(s)	373, 1059, 1730, 1743, 1937, 2008
HapII	CCGG	5 cut(s)	488, 560, 1167, 1652, 2009
HhaI	GCGC	4 cut(s)	232, 266, 268, 1030
Hin1II	CATG	6 cut(s)	53, 391, 407, 1244, 1283, 1397
Hin6I	GCGC	4 cut(s)	230, 264, 266, 1028
HinP1I	GCGC	4 cut(s)	230, 264, 266, 1028
HindIII	AAGCTT	1 cut(s)	1838
HinfI	GANTC	6 cut(s)	73, 508, 1436, 1496, 1703, 1750
HpaII	CCGG	5 cut(s)	488, 560, 1167, 1652, 2009
HphI	GGTGA	7 cut(s)	365, 870, 956, 1122, 1362, 1486, 2011
Hpy166II	GTNNAC	4 cut(s)	107, 303, 912, 1130
Hpy8I	GTNNAC	4 cut(s)	107, 303, 912, 1130
Hpy99I	CGWCG	2 cut(s)	60, 1997
HpyCH4III	ACNGT	6 cut(s)	475, 697, 1037, 1078, 1105, 1374
HpyCH4IV	ACGT	1 cut(s)	2098
HpyF10VI	GCNNNNNNNGC	5 cut(s)	238, 370, 1388, 1796, 1823
HpyF3I	CTNAG	9 cut(s)	278, 345, 750, 1017, 1562, 1734, 1818, 1932, 2089
HpySE526I	ACGT	1 cut(s)	2098
Hsp92II	CATG	6 cut(s)	53, 391, 407, 1244, 1283, 1397
HspAI	GCGC	4 cut(s)	230, 264, 266, 1028
KroI	GCCGGC	2 cut(s)	487, 2008
KroNI	GCCGGC	2 cut(s)	489, 2010
Ksp22I	TGATCA	1 cut(s)	2047
LmnI	GCTCC	1 cut(s)	29
Lsp1109I	GCAGC	3 cut(s)	104, 1229, 1297
LweI	GCATC	7 cut(s)	474, 694, 1075, 1097, 1277, 1391, 1663
MaeI	CTAG	6 cut(s)	632, 1025, 1179, 1485, 1493, 1814
MaeII	ACGT	1 cut(s)	2098
MaeIII	GTNAC	5 cut(s)	131, 515, 1072, 1174, 2017
MbiI	CCGCTC	1 cut(s)	1832
MfeI	CAATTG	3 cut(s)	1065, 1719, 1755
MflI	RGATCY	3 cut(s)	460, 746, 1570
MhlI	GDGCHC	3 cut(s)	26, 286, 1393
MlsI	TGGCCA	2 cut(s)	1059, 1730
MluNI	TGGCCA	2 cut(s)	1059, 1730
MlyI	GAGTC	3 cut(s)	67, 502, 1744
MmeI	TCCRAC	1 cut(s)	2053
Mox20I	TGGCCA	2 cut(s)	1059, 1730
Mph1103I	ATGCAT	1 cut(s)	1090
MroNI	GCCGGC	2 cut(s)	487, 2008
MroXI	GAANNNNTTC	3 cut(s)	627, 1449, 1692
MscI	TGGCCA	2 cut(s)	1059, 1730
MseI	TTAA	6 cut(s)	368, 906, 1187, 1593, 1605, 1842
MslI	CAYNNNNRTG	4 cut(s)	482, 780, 863, 2024
Msp20I	TGGCCA	2 cut(s)	1059, 1730
MspCI	CTTAAG	1 cut(s)	1841
MspI	CCGG	5 cut(s)	488, 560, 1167, 1652, 2009
MspR9I	CCNGG	2 cut(s)	561, 893
MunI	CAATTG	3 cut(s)	1065, 1719, 1755
Mva1269I	GAATGC	2 cut(s)	1117, 1771
MvaI	CCWGG	1 cut(s)	893
MvnI	CGCG	2 cut(s)	264, 266
MwoI	GCNNNNNNNGC	5 cut(s)	238, 370, 1388, 1796, 1823
NaeI	GCCGGC	2 cut(s)	489, 2010
NciI	CCSGG	1 cut(s)	561
NdeI	CATATG	1 cut(s)	145
NgoMIV	GCCGGC	2 cut(s)	487, 2008
NlaIII	CATG	6 cut(s)	53, 391, 407, 1244, 1283, 1397
NlaIV	GGNNCC	3 cut(s)	25, 648, 1548
NmuCI	GTSAC	2 cut(s)	131, 2017
NsiI	ATGCAT	1 cut(s)	1090
NspI	RCATGY	1 cut(s)	53
PagI	TCATGA	1 cut(s)	403
PauI	GCGCGC	1 cut(s)	264
PctI	GAATGC	2 cut(s)	1117, 1771
PdiI	GCCGGC	2 cut(s)	489, 2010
PdmI	GAANNNNTTC	3 cut(s)	627, 1449, 1692
PfeI	GAWTC	3 cut(s)	1436, 1496, 1703
PflMI	CCANNNNNTGG	1 cut(s)	1985
PkrI	GCNGC	3 cut(s)	94, 1219, 1312
PleI	GAGTC	3 cut(s)	67, 502, 1744
PpsI	GAGTC	3 cut(s)	67, 502, 1744
PpuMI	RGGWCCY	1 cut(s)	1274
PshAI	GACNNNNGTC	1 cut(s)	437
PsiI	TTATAA	1 cut(s)	1922
Psp124BI	GAGCTC	1 cut(s)	286
Psp5II	RGGWCCY	1 cut(s)	1274
Psp6I	CCWGG	1 cut(s)	891
PspGI	CCWGG	1 cut(s)	891
PspN4I	GGNNCC	3 cut(s)	25, 648, 1548
PspPI	GGNCC	3 cut(s)	1274, 1546, 1741
PspPPI	RGGWCCY	1 cut(s)	1274
PstI	CTGCAG	1 cut(s)	1801
PsuI	RGATCY	3 cut(s)	460, 746, 1570
PteI	GCGCGC	1 cut(s)	264
RsaI	GTAC	6 cut(s)	106, 322, 804, 1039, 1285, 1650
RsaNI	GTAC	6 cut(s)	105, 321, 803, 1038, 1284, 1649
RseI	CAYNNNNRTG	4 cut(s)	482, 780, 863, 2024
SacI	GAGCTC	1 cut(s)	286
SaqAI	TTAA	6 cut(s)	368, 906, 1187, 1593, 1605, 1842
SatI	GCNGC	3 cut(s)	93, 1218, 1311
Sau96I	GGNCC	3 cut(s)	1274, 1546, 1741
SchI	GAGTC	3 cut(s)	67, 502, 1744
ScrFI	CCNGG	2 cut(s)	561, 893
SduI	GDGCHC	3 cut(s)	26, 286, 1393
SfaNI	GCATC	7 cut(s)	474, 694, 1075, 1097, 1277, 1391, 1663
SfcI	CTRYAG	2 cut(s)	1626, 1797
SinI	GGWCC	2 cut(s)	1274, 1546
SmiMI	CAYNNNNRTG	4 cut(s)	482, 780, 863, 2024
SmlI	CTYRAG	3 cut(s)	456, 510, 1841
SmoI	CTYRAG	3 cut(s)	456, 510, 1841
SsiI	CCGC	4 cut(s)	262, 1468, 1514, 1832
SspMI	CTAG	6 cut(s)	632, 1025, 1179, 1485, 1493, 1814
SstI	GAGCTC	1 cut(s)	286
StyD4I	CCNGG	2 cut(s)	559, 891
StyI	CCWWGG	1 cut(s)	1858
TaaI	ACNGT	6 cut(s)	475, 697, 1037, 1078, 1105, 1374
TaiI	ACGT	1 cut(s)	2101
TaqI	TCGA	2 cut(s)	286, 2053
TatI	WGTACW	1 cut(s)	104
TfiI	GAWTC	3 cut(s)	1436, 1496, 1703
Tru1I	TTAA	6 cut(s)	368, 906, 1187, 1593, 1605, 1842
Tru9I	TTAA	6 cut(s)	368, 906, 1187, 1593, 1605, 1842
TscAI	CASTG	9 cut(s)	258, 334, 400, 1129, 1644, 1738, 1905, 1986, 2116
TseFI	GTSAC	2 cut(s)	131, 2017
TseI	GCWGC	3 cut(s)	92, 1217, 1310
Tsp45I	GTSAC	2 cut(s)	131, 2017
TspDTI	ATGAA	5 cut(s)	20, 392, 1335, 1866, 2042
TspGWI	ACGGA	5 cut(s)	1145, 1250, 1696, 2010, 2079
TspRI	CASTG	9 cut(s)	258, 334, 400, 1129, 1644, 1738, 1905, 1986, 2116
Van91I	CCANNNNNTGG	1 cut(s)	1985
Vha464I	CTTAAG	1 cut(s)	1841
VpaK11BI	GGWCC	2 cut(s)	1274, 1546
XapI	RAATTY	5 cut(s)	86, 337, 605, 986, 1853
XceI	RCATGY	1 cut(s)	53
XmnI	GAANNNNTTC	3 cut(s)	627, 1449, 1692
XspI	CTAG	6 cut(s)	632, 1025, 1179, 1485, 1493, 1814
Zsp2I	ATGCAT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.