Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0009625

Physical Location & Seq

Genomic Coordinates Reverse (-)

40865313 .. 40867274

Gene Structure 1962 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0292400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGATGTCTGAAAGCAGAAGCAGCAGTACGCAAGCAATCTGCTTGTGCAATATTTGCTTCCTAATTATTTTCATCAATTTCTTCTCTCACTTTGCTCATCCACTCTCCTTCAGTATAGATCAGTTCGACCAGAGTGGAAATGGAGTTGTCTGTGAAGGTGATGCCAAGTTTTCATCCGGAGTGATTGAGCTCAACACAGCCACTAATGTCGGTAGTACTGGACATGCTACGTATGAAGAGCCTTTGCATCTATGGGACACTGCTACTGGGTCACTAGCAGACTTCACTACTCATTTCACTTTCGTGGTCGACTCTGGTTACTCGAACTTCAGCGATGGATTTGCCTTTTACCTTGCTCCTGTTGGCTACGGTATTCCACCCAACTCTGGCGGTGGTGAACTGGGATTATTCAACACCACCACCAATTTTAATCTCTTTTCCAGAAACAAGATTGTAACCGTAGAGTTCGACACCTGGGGAGACAAGGATGATGGTTGGGATCCAGCCTGGCCGCATATTGGGATAAACATCAATGAAATCTCTTCGGTTACGTCCGCCAATTGGAATGCCAGTAACATCATCGGGAAGATTGGTAATGCATGGATTACTTACAACGCTACTGCCAACAACCTTACTGTGTTTTGGACATTCAAGGAAAACACAAACCCCGTTTTTCCAGGCAATACTACTTCTTCCCTTACTTACCATGTTGACTTGCGAAAGATTCTCCCCGAAAATGTCACAATTGGTTTTTCTGCTTCGTCCAGATATTTATATGGGTTGTATTCTTTAAATTCATGGGCGTTTAATTCGACTTTGTTGGATAACGATATTAGAAGAGCCGAAAGCAAGGGAAAGAAAAAGATATTATTGATATTGGTCATTGCAGTACCTGGCTTCATTTTGACGCTTGGTGCGGTCATATTTTGGTTGATGGTATTATGGAATCGGAGAAACAATTACTCTGCCGAAGTCTCTGATCTTGACTGGCTAGCCTTTCCAAAACGATTTGCTTACCAAGAATTGTTTGCTGCCACCAACGGGTTTGCAGACGATAGAAGGCTAGGCCAAGGAGGGTCGGGACAAGTATATAAAGGACTCCTACAAGACCTTGGAGGCTGCACAGTTGCCGTGAAGAGAATCTTTGCAAGATCTGATCAACAAGATGAGAAAGTCTTCATCAATGAAGTCAAAATCATAAGCCGCTTAATCCATCGAAACCTGGTGCAGTTCATTGGGTGGTGTCATGAGCAAGGGGAATGCTTACTTGTTTATGCATATATGCCAAACACCAGCCTCGACACGCATCTATTTGGCACCAGAACAACCCTGCAATGGAATAACAGGTACAAGATAGCTATGGGATTGGCCTCAGCCCTTCACTATCTACATGAAGATGCAGAGCAGTGTGTTCTTCATAGGGATATCAAATCAGCTAACGTACTGTTGGGTGATGACTTCAGCACTAAGCTTGGTGATTTTGGTATTGCTAAGCTCGTGGATTCCCGCTTCAGGTCTCAGACAAGAGAGGTGGCCGGGACTTTTGGATACATGGCCCCTGAATATGCTATTGATGGGAGGGCTAGTAAGGAATCTGACATTTTTAGTTTTGGAGTTGTAGCCTTGGAAATTGCTTGCGGAAGGAAGACTTACCAAGACGGTGAATATCACGTGCCACTCTTTAGGTGGGTTTGGCAGTTGTTCCTTGCAGGAAATATTCTAGACGCAGCTGATGAAAGATTAGAAATGAATTATGATCGAAATGAAATGAAATGCTTGTTGATTGTTGGACTATGGTGTACTCACCCCAATAACAAGGAAAGACCCAAAGCAGGACAGGTGATGGAGGTTATTCAGCATAAAGCACCATTGCCGGAACTTCCATATGACATGCATAATTATCCAGAACTGCCTCAACCTCAATACCAATCTCAGACTGCATCTTCTTCTAGCTATATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0045254 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

653

Amino Acids

73.22

Weight (kDa)

5.6

Isoelectric Point (pI)

44.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	35 - 277	7.5e-60	Legume lectin domain
Pkinase	PF00069	351 - 616	7.3e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	352 - 553	4.6e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52200 AT3G52200
fragaria_vesca	FvH4_7g18300 FvH4_7g18300 FvH4_7g18300
malus_domestica	MD01G1099700.v1.1 MD07G1166600.v1.1
prunus_persica	Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1
pyrus_communis	pycom01g12680 pycom07g16180
rosa_chinensis	RchiOBHm_Chr1g0361921
rosa_laevigata	RLG00000027686
rosa_multiflora	Rmu_sc0008041.1_g000008
rosa_roxburghii	Rroxscaffold_4G00294620
rosa_rugosa	Rorug01G0292400
rosa_samantha	Rh1AG302900 Rh1CG284300 Rh1DG296100
rosa_wichuraiana	Rw1G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1316
AccI	GTMKAC	1 cut(s)	309
AccIII	TCCGGA	1 cut(s)	176
AciI	CCGC	7 cut(s)	390, 512, 555, 917, 1204, 1507, 1638
AclWI	GGATC	2 cut(s)	494, 507
AcoI	YGGCCR	2 cut(s)	509, 1533
AcsI	RAATTY	1 cut(s)	793
AcuI	CTGAAG	4 cut(s)	94, 313, 1444, 1495
AcvI	CACGTG	1 cut(s)	1672
AfaI	GTAC	6 cut(s)	28, 217, 891, 1349, 1443, 1801
AfiI	CCNNNNNNNGG	7 cut(s)	386, 518, 561, 1041, 1335, 1512, 1832
AgsI	TTSAA	2 cut(s)	412, 652
AjnI	CCWGG	5 cut(s)	473, 506, 676, 892, 1221
AleI	CACNNNNGTG	1 cut(s)	302
AluBI	AGCT	7 cut(s)	190, 1358, 1436, 1471, 1495, 1730, 1953
AluI	AGCT	7 cut(s)	190, 1358, 1436, 1471, 1495, 1730, 1953
Alw21I	GWGCWC	1 cut(s)	192
Alw26I	GTCTC	3 cut(s)	474, 979, 1521
AlwI	GGATC	2 cut(s)	494, 507
AlwNI	CAGNNNCTG	1 cut(s)	893
Aor13HI	TCCGGA	1 cut(s)	176
AoxI	GGCC	5 cut(s)	509, 1066, 1368, 1533, 1554
ApeKI	GCWGC	4 cut(s)	21, 1031, 1119, 1727
ApoI	RAATTY	1 cut(s)	793
Asp700I	GAANNNNTTC	1 cut(s)	1175
AspS9I	GGNCC	1 cut(s)	1555
AsuC2I	CCSGG	1 cut(s)	1537
AsuHPI	GGTGA	7 cut(s)	170, 407, 1463, 1487, 1673, 1796, 1852
AsuNHI	GCTAGC	1 cut(s)	991
BamHI	GGATCC	1 cut(s)	499
BanI	GGYRCC	1 cut(s)	1316
BanII	GRGCYC	1 cut(s)	192
BarI	GAAGNNNNNNTAC	2 cut(s)	10, 42
BauI	CACGAG	1 cut(s)	1496
BbrPI	CACGTG	1 cut(s)	1672
BbsI	GAAGAC	2 cut(s)	1168, 1652
Bbv12I	GWGCWC	1 cut(s)	192
BbvCI	CCTCAGC	1 cut(s)	1372
BbvI	GCAGC	4 cut(s)	33, 1018, 1106, 1739
BccI	CCATC	6 cut(s)	329, 485, 928, 1221, 1568, 1837
BceAI	ACGGC	1 cut(s)	1115
BcgI	CGANNNNNNTGC	2 cut(s)	323, 357
BciT130I	CCWGG	5 cut(s)	475, 508, 678, 894, 1223
BciVI	GTATCC	1 cut(s)	1541
BclI	TGATCA	1 cut(s)	1156
BcnI	CCSGG	1 cut(s)	1537
BcoDI	GTCTC	3 cut(s)	474, 979, 1521
BfaI	CTAG	6 cut(s)	275, 992, 1064, 1584, 1721, 1950
BfuI	GTATCC	1 cut(s)	1541
BglII	AGATCT	1 cut(s)	1151
BisI	GCNGC	6 cut(s)	22, 512, 1032, 1120, 1204, 1728
BlpI	GCTNAGC	1 cut(s)	1491
BlsI	GCNGC	6 cut(s)	23, 513, 1033, 1121, 1205, 1729
BmcAI	AGTACT	1 cut(s)	217
Bme1390I	CCNGG	6 cut(s)	475, 508, 678, 894, 1223, 1537
BmgT120I	GGNCC	1 cut(s)	1555
BmiI	GGNNCC	3 cut(s)	501, 1318, 1557
BmrFI	CCNGG	6 cut(s)	475, 508, 678, 894, 1223, 1537
BmrI	ACTGGG	2 cut(s)	276, 410
BmsI	GCATC	5 cut(s)	151, 256, 1315, 1387, 1949
BmtI	GCTAGC	1 cut(s)	995
BmuI	ACTGGG	2 cut(s)	276, 410
BpiI	GAAGAC	2 cut(s)	1168, 1652
Bpu10I	CCTNAGC	1 cut(s)	1372
Bpu1102I	GCTNAGC	1 cut(s)	1491
BpuMI	CCSGG	1 cut(s)	1537
BsaAI	YACGTR	2 cut(s)	231, 1672
BsaBI	GATNNNNATC	1 cut(s)	527
BsaI	GGTCTC	1 cut(s)	1521
BsaJI	CCNNGG	4 cut(s)	474, 1069, 1111, 1623
BsaWI	WCCGGW	1 cut(s)	176
BsaXI	ACNNNNNCTCC	2 cut(s)	1570, 1600
Bsc4I	CCNNNNNNNGG	7 cut(s)	386, 518, 561, 1041, 1335, 1512, 1832
Bse1I	ACTGG	5 cut(s)	223, 271, 405, 570, 992
Bse3DI	GCAATG	3 cut(s)	882, 1340, 1868
Bse8I	GATNNNNATC	1 cut(s)	527
BseAI	TCCGGA	1 cut(s)	176
BseBI	CCWGG	5 cut(s)	475, 508, 678, 894, 1223
BseDI	CCNNGG	4 cut(s)	474, 1069, 1111, 1623
BseGI	GGATG	3 cut(s)	97, 173, 493
BseJI	GATNNNNATC	1 cut(s)	527
BseLI	CCNNNNNNNGG	7 cut(s)	386, 518, 561, 1041, 1335, 1512, 1832
BseMI	GCAATG	3 cut(s)	882, 1340, 1868
BseMII	CTCAG	3 cut(s)	1386, 1532, 1946
BseNI	ACTGG	5 cut(s)	223, 271, 405, 570, 992
BseXI	GCAGC	4 cut(s)	33, 1018, 1106, 1739
BsgI	GTGCAG	2 cut(s)	1105, 1247
BshFI	GGCC	5 cut(s)	511, 1068, 1370, 1535, 1556
BshNI	GGYRCC	1 cut(s)	1316
BsiHKAI	GWGCWC	1 cut(s)	192
BsiSI	CCGG	3 cut(s)	177, 1536, 1874
BslFI	GGGAC	3 cut(s)	269, 1095, 1552
BslI	CCNNNNNNNGG	7 cut(s)	386, 518, 561, 1041, 1335, 1512, 1832
BsmAI	GTCTC	3 cut(s)	474, 979, 1521
BsmFI	GGGAC	3 cut(s)	269, 1095, 1552
BsmI	GAATGC	2 cut(s)	571, 1265
BsnI	GGCC	5 cut(s)	511, 1068, 1370, 1535, 1556
Bso31I	GGTCTC	1 cut(s)	1521
Bsp1286I	GDGCHC	1 cut(s)	192
Bsp13I	TCCGGA	1 cut(s)	176
Bsp143I	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
Bsp1720I	GCTNAGC	1 cut(s)	1491
BspACI	CCGC	7 cut(s)	390, 512, 555, 917, 1204, 1507, 1638
BspANI	GGCC	5 cut(s)	511, 1068, 1370, 1535, 1556
BspCNI	CTCAG	3 cut(s)	1385, 1531, 1945
BspEI	TCCGGA	1 cut(s)	176
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	3 cut(s)	501, 1318, 1557
BspOI	GCTAGC	1 cut(s)	995
BspPI	GGATC	2 cut(s)	494, 507
BspQI	GCTCTTC	2 cut(s)	231, 832
BspT107I	GGYRCC	1 cut(s)	1316
BspTNI	GGTCTC	1 cut(s)	1521
BsrDI	GCAATG	3 cut(s)	882, 1340, 1868
BsrI	ACTGG	5 cut(s)	223, 271, 405, 570, 992
BssECI	CCNNGG	4 cut(s)	474, 1069, 1111, 1623
BssMI	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
BssSI	CACGAG	1 cut(s)	1496
BssT1I	CCWWGG	3 cut(s)	1069, 1111, 1623
Bst2BI	CACGAG	1 cut(s)	1496
Bst2UI	CCWGG	5 cut(s)	475, 508, 678, 894, 1223
Bst4CI	ACNGT	6 cut(s)	371, 460, 637, 1126, 1446, 1661
Bst6I	CTCTTC	4 cut(s)	231, 547, 832, 1130
BstAPI	GCANNNNNTGC	1 cut(s)	54
BstBAI	YACGTR	2 cut(s)	231, 1672
BstC8I	GCNNGC	3 cut(s)	33, 993, 1636
BstDEI	CTNAG	5 cut(s)	1372, 1467, 1491, 1518, 1932
BstF5I	GGATG	3 cut(s)	97, 173, 493
BstKTI	GATC	6 cut(s)	121, 502, 982, 1154, 1159, 1759
BstMAI	GTCTC	3 cut(s)	474, 979, 1521
BstMBI	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
BstMWI	GCNNNNNNNGC	2 cut(s)	21, 54
BstNI	CCWGG	5 cut(s)	475, 508, 678, 894, 1223
BstNSI	RCATGY	2 cut(s)	227, 1894
BstSCI	CCNGG	6 cut(s)	473, 506, 676, 892, 1221, 1535
BstSNI	TACGTA	1 cut(s)	231
BstV1I	GCAGC	4 cut(s)	33, 1018, 1106, 1739
BstV2I	GAAGAC	2 cut(s)	1168, 1652
BstX2I	RGATCY	2 cut(s)	499, 1151
BstYI	RGATCY	2 cut(s)	499, 1151
BsuI	GTATCC	1 cut(s)	1541
BsuRI	GGCC	5 cut(s)	511, 1068, 1370, 1535, 1556
BtgZI	GCGATG	1 cut(s)	348
BtsCI	GGATG	3 cut(s)	97, 173, 493
BtsI	GCAGTG	2 cut(s)	258, 1412
BtsIMutI	CAGTG	2 cut(s)	258, 1412
Cac8I	GCNNGC	3 cut(s)	33, 993, 1636
CaiI	CAGNNNCTG	1 cut(s)	893
CciI	TCATGA	1 cut(s)	1246
Cfr13I	GGNCC	1 cut(s)	1555
CseI	GACGC	2 cut(s)	916, 1733
CsiI	ACCWGGT	1 cut(s)	1221
Csp6I	GTAC	6 cut(s)	27, 216, 890, 1348, 1442, 1800
CspCI	CAANNNNNGTGG	2 cut(s)	1512, 1547
CviAII	CATG	8 cut(s)	224, 600, 707, 798, 1247, 1391, 1552, 1891
CviQI	GTAC	6 cut(s)	27, 216, 890, 1348, 1442, 1800
DdeI	CTNAG	5 cut(s)	1372, 1467, 1491, 1518, 1932
DpnI	GATC	6 cut(s)	120, 501, 981, 1153, 1158, 1758
DpnII	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
DraI	TTTAAA	1 cut(s)	792
EaeI	YGGCCR	2 cut(s)	509, 1533
Eam1104I	CTCTTC	4 cut(s)	231, 547, 832, 1130
EarI	CTCTTC	4 cut(s)	231, 547, 832, 1130
EciI	GGCGGA	1 cut(s)	544
Ecl136II	GAGCTC	1 cut(s)	190
Eco105I	TACGTA	1 cut(s)	231
Eco130I	CCWWGG	3 cut(s)	1069, 1111, 1623
Eco24I	GRGCYC	1 cut(s)	192
Eco31I	GGTCTC	1 cut(s)	1521
Eco32I	GATATC	1 cut(s)	1426
Eco53kI	GAGCTC	1 cut(s)	190
Eco57I	CTGAAG	4 cut(s)	94, 313, 1444, 1495
Eco72I	CACGTG	1 cut(s)	1672
EcoICRI	GAGCTC	1 cut(s)	190
EcoRII	CCWGG	5 cut(s)	473, 506, 676, 892, 1221
EcoRV	GATATC	1 cut(s)	1426
EcoT14I	CCWWGG	3 cut(s)	1069, 1111, 1623
EcoT22I	ATGCAT	3 cut(s)	601, 1279, 1896
EcoT38I	GRGCYC	1 cut(s)	192
ErhI	CCWWGG	3 cut(s)	1069, 1111, 1623
FaeI	CATG	8 cut(s)	227, 603, 710, 801, 1250, 1394, 1555, 1894
FalI	AAGNNNNNCTT	4 cut(s)	1127, 1159, 1633, 1665
FaqI	GGGAC	3 cut(s)	269, 1095, 1552
FatI	CATG	8 cut(s)	223, 599, 706, 797, 1246, 1390, 1551, 1890
FauI	CCCGC	1 cut(s)	1514
FauNDI	CATATG	1 cut(s)	1885
FbaI	TGATCA	1 cut(s)	1156
FblI	GTMKAC	1 cut(s)	309
Fnu4HI	GCNGC	6 cut(s)	22, 512, 1032, 1120, 1204, 1728
FokI	GGATG	3 cut(s)	84, 160, 500
FriOI	GRGCYC	1 cut(s)	192
Fsp4HI	GCNGC	6 cut(s)	22, 512, 1032, 1120, 1204, 1728
FspBI	CTAG	6 cut(s)	275, 992, 1064, 1584, 1721, 1950
GluI	GCNGC	6 cut(s)	22, 512, 1032, 1120, 1204, 1728
HaeIII	GGCC	5 cut(s)	511, 1068, 1370, 1535, 1556
HapII	CCGG	3 cut(s)	177, 1536, 1874
HgaI	GACGC	2 cut(s)	916, 1733
Hin1II	CATG	8 cut(s)	227, 603, 710, 801, 1250, 1394, 1555, 1894
HincII	GTYRAC	2 cut(s)	310, 712
HindII	GTYRAC	2 cut(s)	310, 712
HindIII	AAGCTT	1 cut(s)	1469
HinfI	GANTC	7 cut(s)	311, 724, 946, 1098, 1140, 1502, 1592
HpaII	CCGG	3 cut(s)	177, 1536, 1874
HphI	GGTGA	7 cut(s)	170, 407, 1463, 1487, 1673, 1796, 1852
Hpy166II	GTNNAC	4 cut(s)	310, 398, 712, 1800
Hpy188I	TCNGA	7 cut(s)	10, 951, 979, 1156, 1521, 1597, 1935
Hpy188III	TCNNGA	9 cut(s)	177, 441, 583, 765, 983, 1080, 1247, 1721, 1904
Hpy8I	GTNNAC	4 cut(s)	310, 398, 712, 1800
HpyAV	CCTTC	5 cut(s)	118, 149, 1053, 1388, 1635
HpyCH4III	ACNGT	6 cut(s)	371, 460, 637, 1126, 1446, 1661
HpyCH4IV	ACGT	4 cut(s)	230, 551, 1440, 1671
HpyF10VI	GCNNNNNNNGC	2 cut(s)	21, 54
HpyF3I	CTNAG	5 cut(s)	1372, 1467, 1491, 1518, 1932
HpySE526I	ACGT	4 cut(s)	230, 551, 1440, 1671
Hsp92II	CATG	8 cut(s)	227, 603, 710, 801, 1250, 1394, 1555, 1894
Kpn2I	TCCGGA	1 cut(s)	176
Ksp22I	TGATCA	1 cut(s)	1156
Kzo9I	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
LguI	GCTCTTC	2 cut(s)	231, 832
LmnI	GCTCC	1 cut(s)	361
Lsp1109I	GCAGC	4 cut(s)	33, 1018, 1106, 1739
LweI	GCATC	5 cut(s)	151, 256, 1315, 1387, 1949
MabI	ACCWGGT	1 cut(s)	1221
MaeI	CTAG	6 cut(s)	275, 992, 1064, 1584, 1721, 1950
MaeII	ACGT	4 cut(s)	230, 551, 1440, 1671
MaeIII	GTNAC	6 cut(s)	270, 317, 454, 547, 572, 739
MalI	GATC	6 cut(s)	120, 501, 981, 1153, 1158, 1758
MboI	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
MfeI	CAATTG	2 cut(s)	559, 744
MflI	RGATCY	2 cut(s)	499, 1151
MhlI	GDGCHC	1 cut(s)	192
MlyI	GAGTC	2 cut(s)	305, 1092
MmeI	TCCRAC	2 cut(s)	801, 1768
MnlI	CCTC	9 cut(s)	1067, 1109, 1307, 1381, 1522, 1572, 1840, 1923, 1929
Mph1103I	ATGCAT	3 cut(s)	601, 1279, 1896
MroI	TCCGGA	1 cut(s)	176
MroXI	GAANNNNTTC	1 cut(s)	1175
MseI	TTAA	4 cut(s)	429, 791, 807, 1208
MslI	CAYNNNNRTG	2 cut(s)	302, 1395
MspA1I	CMGCKG	1 cut(s)	1730
MspI	CCGG	3 cut(s)	177, 1536, 1874
MspR9I	CCNGG	6 cut(s)	475, 508, 678, 894, 1223, 1537
MunI	CAATTG	2 cut(s)	559, 744
Mva1269I	GAATGC	2 cut(s)	571, 1265
MvaI	CCWGG	5 cut(s)	475, 508, 678, 894, 1223
MwoI	GCNNNNNNNGC	2 cut(s)	21, 54
NciI	CCSGG	1 cut(s)	1537
NdeI	CATATG	1 cut(s)	1885
NdeII	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
NheI	GCTAGC	1 cut(s)	991
NlaIII	CATG	8 cut(s)	227, 603, 710, 801, 1250, 1394, 1555, 1894
NlaIV	GGNNCC	3 cut(s)	501, 1318, 1557
NmuCI	GTSAC	2 cut(s)	270, 739
NsiI	ATGCAT	3 cut(s)	601, 1279, 1896
NspI	RCATGY	2 cut(s)	227, 1894
OliI	CACNNNNGTG	1 cut(s)	302
PagI	TCATGA	1 cut(s)	1246
PciSI	GCTCTTC	2 cut(s)	231, 832
PctI	GAATGC	2 cut(s)	571, 1265
PdmI	GAANNNNTTC	1 cut(s)	1175
PfeI	GAWTC	5 cut(s)	724, 946, 1140, 1502, 1592
PkrI	GCNGC	6 cut(s)	23, 513, 1033, 1121, 1205, 1729
PleI	GAGTC	2 cut(s)	305, 1092
PmaCI	CACGTG	1 cut(s)	1672
PmlI	CACGTG	1 cut(s)	1672
PpsI	GAGTC	2 cut(s)	305, 1092
Ppu21I	YACGTR	2 cut(s)	231, 1672
Psp124BI	GAGCTC	1 cut(s)	192
Psp6I	CCWGG	5 cut(s)	473, 506, 676, 892, 1221
PspCI	CACGTG	1 cut(s)	1672
PspGI	CCWGG	5 cut(s)	473, 506, 676, 892, 1221
PspN4I	GGNNCC	3 cut(s)	501, 1318, 1557
PspPI	GGNCC	1 cut(s)	1555
PstNI	CAGNNNCTG	1 cut(s)	893
PsuI	RGATCY	2 cut(s)	499, 1151
PvuII	CAGCTG	1 cut(s)	1730
RsaI	GTAC	6 cut(s)	28, 217, 891, 1349, 1443, 1801
RsaNI	GTAC	6 cut(s)	27, 216, 890, 1348, 1442, 1800
RseI	CAYNNNNRTG	2 cut(s)	302, 1395
SacI	GAGCTC	1 cut(s)	192
SalI	GTCGAC	1 cut(s)	308
SapI	GCTCTTC	2 cut(s)	231, 832
SaqAI	TTAA	4 cut(s)	429, 791, 807, 1208
SatI	GCNGC	6 cut(s)	22, 512, 1032, 1120, 1204, 1728
Sau3AI	GATC	6 cut(s)	118, 499, 979, 1151, 1156, 1756
Sau96I	GGNCC	1 cut(s)	1555
ScaI	AGTACT	1 cut(s)	217
SchI	GAGTC	2 cut(s)	305, 1092
ScrFI	CCNGG	6 cut(s)	475, 508, 678, 894, 1223, 1537
SduI	GDGCHC	1 cut(s)	192
SexAI	ACCWGGT	1 cut(s)	1221
SfaNI	GCATC	5 cut(s)	151, 256, 1315, 1387, 1949
SmiMI	CAYNNNNRTG	2 cut(s)	302, 1395
SnaBI	TACGTA	1 cut(s)	231
SsiI	CCGC	7 cut(s)	390, 512, 555, 917, 1204, 1507, 1638
SspI	AATATT	2 cut(s)	52, 1717
SspMI	CTAG	6 cut(s)	275, 992, 1064, 1584, 1721, 1950
SstI	GAGCTC	1 cut(s)	192
StyD4I	CCNGG	6 cut(s)	473, 506, 676, 892, 1221, 1535
StyI	CCWWGG	3 cut(s)	1069, 1111, 1623
TaaI	ACNGT	6 cut(s)	371, 460, 637, 1126, 1446, 1661
TaiI	ACGT	4 cut(s)	233, 554, 1443, 1674
TaqI	TCGA	8 cut(s)	126, 309, 323, 468, 812, 1216, 1299, 1759
TatI	WGTACW	2 cut(s)	215, 1799
TauI	GCSGC	2 cut(s)	514, 1206
TfiI	GAWTC	5 cut(s)	724, 946, 1140, 1502, 1592
Tru1I	TTAA	4 cut(s)	429, 791, 807, 1208
Tru9I	TTAA	4 cut(s)	429, 791, 807, 1208
TscAI	CASTG	2 cut(s)	265, 1412
TseFI	GTSAC	2 cut(s)	270, 739
TseI	GCWGC	4 cut(s)	21, 1031, 1119, 1727
Tsp45I	GTSAC	2 cut(s)	270, 739
TspRI	CASTG	2 cut(s)	265, 1412
XapI	RAATTY	1 cut(s)	793
XbaI	TCTAGA	1 cut(s)	1720
XceI	RCATGY	2 cut(s)	227, 1894
XcmI	CCANNNNNNNNNTGG	2 cut(s)	137, 1683
XmiI	GTMKAC	1 cut(s)	309
XmnI	GAANNNNTTC	1 cut(s)	1175
XspI	CTAG	6 cut(s)	275, 992, 1064, 1584, 1721, 1950
ZrmI	AGTACT	1 cut(s)	217
Zsp2I	ATGCAT	3 cut(s)	601, 1279, 1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.