Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0009625

Physical Location & Seq

Genomic Coordinates Forward (+)

52168732 .. 52176087

Gene Structure 7356 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG296100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCGCTCTCACGGCTTCGACACCCTGTGATCTCACGCGCCCCTTCTCTTTTCCGAGCTCGCCTTCTCTCCTCGTCCACCGGATCACTCACTCGAAGTTCCGGTGTGCAGAATTTGACTGTGGGAGGTGATGGTGCTCTTTTAAGGCCTGCATCTTTGTCCAGAGTCCAGTATAAATTTTCATACCTCAAGCCTTGGACGGGTGTCAAGCATTACTCAACTGCCGATCCTTTGTATGCTGTCCTTGATATGCCTGCTTTGTCTCCTACAATGAGCCAAGGTAACATTGCTAAATGGAGGAAGAAAGAGGGAGATAAGATTGAAGTGGGTGATGTACTATGTGAAATTGAAACTGACAAAGCTACTCTTGAATTTGAAAGTCTTGAAGAAGGGTTTCTAGCCAAGATACTGGTACCTGAAGGTTCAAAGGATGTGCCTGTGGGACAACCTATTGCAGTAACGGTCGAGGATAAAGATGAAATCCAAAACATCCCTGCTAATATTGTGGGTGGATCTGAGGTGAAAGAGGACATACCACAACATCAGAAAGATGAGGCACAAGATACAAGTTCTGTGGGGATAAACACAGCAGACCTTCCACCTCACATTGTTGTTGAAATGCCAGCTTTGTCTCCAACAATGAGCCAAGGAAACATTGCTGTGTGGAGAAAGAAAGAAGGAGATAAGATAGAAGTTGGTGATGTGTTGTGTGAGATAGAGACGGACAAAGCCACCCTTGAATTTGAATGCCTTGAAGAGGGATACTTGGCTAAAATACTAGCACCTGAAGGTTCAAAGGATGTGGCTGTTGGCCAACCAATTGCAGTAACAGTTGAGGATGCAGCTGATTTGGAAACTGTAAAGAATGGTGTCAGTGTTGGTTCAAGTGTCAAAAAGGAAAAACCAATTCATCATGATACTAAACATGAAAGTGGAGCAGTAAAAACAACCAGTGTCAAAAGGATCAGTCCAGCAGCTAAAAATCTAATTCTAGAACACAGATTGGATACATCGTCATTGAGGGCATCAGGTGCTCATGGTACGCTACTGAAAGGGGATGTTTTAGCGGCAATCAAGTCAGGAACTGGATCTTCAAAAGTTTCATCATCTAAAGAGAAGGCACTTTCATCTTCTCAAGCACATATACAGATAGCTCCAGCATCACCAGAGTCAAGGTCTTTACAGCAGACAGATTTTGAAGAGTTTCCCAACAGTCAAATTCGCAAGGTGATAGCTAGTAGGTTGCTGGAATCAAAACAAAACATACCACACTTGTATTTATCCTCAGATGTTATCCTGGATCCTCTTCTTTCTCTTAGAAAGGATCTTAAAGAGCAGCATAATGTTAAAGTTTCAGTGAATGACATTGTCATTAGAGCTGTAGCTATTGCACTGAGAAATGTACCGGAAGCAAATGCTTACTGGGATGCTGAAAAGGGAGAAGTGATTCTTTGTGATTCTGTTGATATATCAATTGCTGTCGCTACCGACAAGGGTCTGATGACTCCAATTGTGAAAAATGCGGATCAGAAAACAATATCAGCAATCTCCTCAGAGGTCAAGGAACTAGCTGAGAGGGCACGGGCAGGAAAGCTTAAGCCAAGTGAATTCCAAGGAGGGACTTTCAGCATTTCAAACTTGGGGATGTTTCCGGTGGATCATTTCTGTGCAATTATAAATCCACCTCAGGCCAGTATCCTTGCTGTAGGCAGAGGCAACAAAGTTGTTGAACCAGTAATTGGAAGTGATGGAATTGAAAGGCCAGCAGTTGTCACAAAAATGAACTTGACGTTATCGGCGGATCATCGTGTTTTTGACGGCAAAGTTGGAGGTACATTCCTCTCAGCTTTACAATCAAACTTCAGTGACATCCGAAGACTTCTTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0032991 GO:0044424 GO:0044444 GO:0044464 GO:0045254 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

629

Amino Acids

67.65

Weight (kDa)

6.03

Isoelectric Point (pI)

49.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Biotin_lipoyl	PF00364	82 - 153	2.1e-18	Biotin-requiring enzyme
Biotin_lipoyl	PF00364	205 - 276	5.1e-17	Biotin-requiring enzyme
E3_binding	PF02817	321 - 355	3.3e-06	e3 binding domain
2-oxoacid_dh	PF00198	398 - 628	1e-75	2-oxoacid dehydrogenases acyltransferase (catalytic domain)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009625)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52200 AT3G52200
fragaria_vesca	FvH4_7g18300 FvH4_7g18300 FvH4_7g18300
malus_domestica	MD01G1099700.v1.1 MD07G1166600.v1.1
prunus_persica	Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1 Prupe.2G204600_v2.0.a1
pyrus_communis	pycom01g12680 pycom07g16180
rosa_chinensis	RchiOBHm_Chr1g0361921
rosa_laevigata	RLG00000027686
rosa_multiflora	Rmu_sc0008041.1_g000008
rosa_roxburghii	Rroxscaffold_4G00294620
rosa_rugosa	Rorug01G0292400
rosa_samantha	Rh1AG302900 Rh1CG284300 Rh1DG296100
rosa_wichuraiana	Rw1G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1676
Acc65I	GGTACC	1 cut(s)	412
AccB1I	GGYRCC	1 cut(s)	412
AccB7I	CCANNNNNTGG	1 cut(s)	1739
AccII	CGCG	1 cut(s)	39
AciI	CCGC	3 cut(s)	1067, 1523, 1799
AcoI	YGGCCR	1 cut(s)	811
AcsI	RAATTY	6 cut(s)	112, 176, 371, 740, 1218, 1607
AcuI	CTGAAG	3 cut(s)	438, 807, 1846
AdeI	CACNNNGTG	1 cut(s)	28
AfaI	GTAC	5 cut(s)	336, 414, 1042, 1404, 1834
AfiI	CCNNNNNNNGG	3 cut(s)	200, 757, 1739
AflII	CTTAAG	1 cut(s)	1595
AjnI	CCWGG	1 cut(s)	1296
AjuI	GAANNNNNNNTTGG	2 cut(s)	1722, 1754
Alw21I	GWGCWC	3 cut(s)	61, 139, 1036
Alw26I	GTCTC	3 cut(s)	267, 636, 713
AlwNI	CAGNNNCTG	1 cut(s)	1085
AoxI	GGCC	4 cut(s)	146, 811, 1689, 1760
ApeKI	GCWGC	3 cut(s)	842, 974, 1336
ApoI	RAATTY	6 cut(s)	112, 176, 371, 740, 1218, 1607
Asp700I	GAANNNNTTC	3 cut(s)	393, 1203, 1446
Asp718I	GGTACC	1 cut(s)	412
AspLEI	GCGC	2 cut(s)	7, 41
AsuHPI	GGTGA	6 cut(s)	140, 341, 532, 710, 1155, 1240
AxyI	CCTNAGG	1 cut(s)	1686
BaeGI	GKGCMC	1 cut(s)	1582
BalI	TGGCCA	1 cut(s)	813
BamHI	GGATCC	1 cut(s)	1300
BanI	GGYRCC	1 cut(s)	412
BanII	GRGCYC	1 cut(s)	61
BbsI	GAAGAC	1 cut(s)	1882
Bbv12I	GWGCWC	3 cut(s)	61, 139, 1036
BbvI	GCAGC	3 cut(s)	854, 986, 1348
BccI	CCATC	2 cut(s)	125, 1742
BceAI	ACGGC	2 cut(s)	29, 1834
BciT130I	CCWGG	1 cut(s)	1298
BciVI	GTATCC	3 cut(s)	755, 1000, 1706
BcoDI	GTCTC	3 cut(s)	267, 636, 713
BfaI	CTAG	5 cut(s)	398, 779, 992, 1236, 1568
BfmI	CTRYAG	2 cut(s)	1380, 1704
BfoI	RGCGCY	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	1595
BfuI	GTATCC	3 cut(s)	755, 1000, 1706
BisI	GCNGC	4 cut(s)	843, 975, 1068, 1337
BlsI	GCNGC	4 cut(s)	844, 976, 1069, 1338
Bme1390I	CCNGG	1 cut(s)	1298
BmiI	GGNNCC	2 cut(s)	414, 1302
BmrFI	CCNGG	1 cut(s)	1298
BmrI	ACTGGG	1 cut(s)	1432
BmsI	GCATC	5 cut(s)	161, 829, 1034, 1169, 1417
BmuI	ACTGGG	1 cut(s)	1432
BoxI	GACNNNNGTC	2 cut(s)	203, 1494
BpiI	GAAGAC	1 cut(s)	1882
BpmI	CTGGAG	1 cut(s)	1140
BpuEI	CTTGAG	2 cut(s)	173, 1119
BsaJI	CCNNGG	4 cut(s)	194, 277, 646, 1612
BsaWI	WCCGGW	4 cut(s)	80, 101, 1405, 1651
Bsc4I	CCNNNNNNNGG	3 cut(s)	200, 757, 1739
Bse1I	ACTGG	7 cut(s)	169, 414, 951, 1090, 1427, 1692, 1733
Bse21I	CCTNAGG	1 cut(s)	1686
Bse3DI	GCAATG	2 cut(s)	285, 654
BseBI	CCWGG	1 cut(s)	1298
BseDI	CCNNGG	4 cut(s)	194, 277, 646, 1612
BseGI	GGATG	8 cut(s)	436, 489, 805, 844, 1063, 1432, 1650, 1869
BseLI	CCNNNNNNNGG	3 cut(s)	200, 757, 1739
BseMI	GCAATG	2 cut(s)	285, 654
BseMII	CTCAG	7 cut(s)	507, 1299, 1385, 1563, 1566, 1700, 1857
BseNI	ACTGG	7 cut(s)	169, 414, 951, 1090, 1427, 1692, 1733
BseRI	GAGGAG	2 cut(s)	61, 1540
BseSI	GKGCMC	1 cut(s)	1582
BseXI	GCAGC	3 cut(s)	854, 986, 1348
BsgI	GTGCAG	1 cut(s)	128
Bsh1236I	CGCG	1 cut(s)	39
Bsh1285I	CGRYCG	1 cut(s)	465
BshFI	GGCC	4 cut(s)	148, 813, 1691, 1762
BshNI	GGYRCC	1 cut(s)	412
BsiEI	CGRYCG	1 cut(s)	465
BsiHKAI	GWGCWC	3 cut(s)	61, 139, 1036
BsiSI	CCGG	4 cut(s)	81, 102, 1406, 1652
BslFI	GGGAC	2 cut(s)	456, 1633
BslI	CCNNNNNNNGG	3 cut(s)	200, 757, 1739
BsmAI	GTCTC	3 cut(s)	267, 636, 713
BsmBI	CGTCTC	1 cut(s)	713
BsmFI	GGGAC	2 cut(s)	456, 1633
BsmI	GAATGC	1 cut(s)	752
BsnI	GGCC	4 cut(s)	148, 813, 1691, 1762
Bsp1286I	GDGCHC	4 cut(s)	61, 139, 1036, 1582
BspACI	CCGC	3 cut(s)	1067, 1523, 1799
BspANI	GGCC	4 cut(s)	148, 813, 1691, 1762
BspCNI	CTCAG	7 cut(s)	508, 1298, 1386, 1564, 1565, 1699, 1856
BspFNI	CGCG	1 cut(s)	39
BspHI	TCATGA	1 cut(s)	913
BspLI	GGNNCC	2 cut(s)	414, 1302
BspT107I	GGYRCC	1 cut(s)	412
BspTI	CTTAAG	1 cut(s)	1595
BsrDI	GCAATG	2 cut(s)	285, 654
BsrI	ACTGG	7 cut(s)	169, 414, 951, 1090, 1427, 1692, 1733
BssECI	CCNNGG	4 cut(s)	194, 277, 646, 1612
BssT1I	CCWWGG	4 cut(s)	194, 277, 646, 1612
Bst2UI	CCWGG	1 cut(s)	1298
Bst4CI	ACNGT	5 cut(s)	121, 463, 832, 859, 1214
Bst6I	CTCTTC	3 cut(s)	750, 1194, 1311
BstAFI	CTTAAG	1 cut(s)	1595
BstAPI	GCANNNNNTGC	1 cut(s)	1031
BstC8I	GCNNGC	5 cut(s)	61, 150, 255, 624, 1764
BstDEI	CTNAG	8 cut(s)	516, 1285, 1316, 1394, 1552, 1572, 1686, 1843
BstENI	CCTNNNNNAGG	1 cut(s)	755
BstF5I	GGATG	8 cut(s)	436, 489, 805, 844, 1063, 1432, 1650, 1869
BstFNI	CGCG	1 cut(s)	39
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	2 cut(s)	7, 41
BstMAI	GTCTC	3 cut(s)	267, 636, 713
BstMCI	CGRYCG	1 cut(s)	465
BstMWI	GCNNNNNNNGC	3 cut(s)	13, 1031, 1577
BstNI	CCWGG	1 cut(s)	1298
BstPAI	GACNNNNGTC	2 cut(s)	203, 1494
BstSCI	CCNGG	1 cut(s)	1296
BstSFI	CTRYAG	2 cut(s)	1380, 1704
BstSLI	GKGCMC	1 cut(s)	1582
BstUI	CGCG	1 cut(s)	39
BstV1I	GCAGC	3 cut(s)	854, 986, 1348
BstV2I	GAAGAC	1 cut(s)	1882
BstX2I	RGATCY	4 cut(s)	512, 1088, 1300, 1324
BstXI	CCANNNNNNTGG	1 cut(s)	409
BstYI	RGATCY	4 cut(s)	512, 1088, 1300, 1324
Bsu36I	CCTNAGG	1 cut(s)	1686
BsuI	GTATCC	3 cut(s)	755, 1000, 1706
BsuRI	GGCC	4 cut(s)	148, 813, 1691, 1762
BtsCI	GGATG	8 cut(s)	436, 489, 805, 844, 1063, 1432, 1650, 1869
BtsIMutI	CAGTG	5 cut(s)	880, 958, 1362, 1391, 1870
Cac8I	GCNNGC	5 cut(s)	61, 150, 255, 624, 1764
CaiI	CAGNNNCTG	1 cut(s)	1085
CciI	TCATGA	1 cut(s)	913
CfoI	GCGC	2 cut(s)	7, 41
Csp6I	GTAC	5 cut(s)	335, 413, 1041, 1403, 1833
CspCI	CAANNNNNGTGG	4 cut(s)	555, 590, 783, 818
CviAII	CATG	3 cut(s)	914, 926, 1037
CviQI	GTAC	5 cut(s)	335, 413, 1041, 1403, 1833
DdeI	CTNAG	8 cut(s)	516, 1285, 1316, 1394, 1552, 1572, 1686, 1843
DraIII	CACNNNGTG	1 cut(s)	28
EaeI	YGGCCR	1 cut(s)	811
Eam1104I	CTCTTC	3 cut(s)	750, 1194, 1311
EarI	CTCTTC	3 cut(s)	750, 1194, 1311
EciI	GGCGGA	1 cut(s)	1814
Ecl136II	GAGCTC	1 cut(s)	59
Eco130I	CCWWGG	4 cut(s)	194, 277, 646, 1612
Eco147I	AGGCCT	1 cut(s)	148
Eco24I	GRGCYC	1 cut(s)	61
Eco53kI	GAGCTC	1 cut(s)	59
Eco57I	CTGAAG	3 cut(s)	438, 807, 1846
Eco81I	CCTNAGG	1 cut(s)	1686
EcoICRI	GAGCTC	1 cut(s)	59
EcoNI	CCTNNNNNAGG	1 cut(s)	755
EcoRI	GAATTC	1 cut(s)	1607
EcoRII	CCWGG	1 cut(s)	1296
EcoT14I	CCWWGG	4 cut(s)	194, 277, 646, 1612
EcoT38I	GRGCYC	1 cut(s)	61
ErhI	CCWWGG	4 cut(s)	194, 277, 646, 1612
Esp3I	CGTCTC	1 cut(s)	713
FaeI	CATG	3 cut(s)	917, 929, 1040
FalI	AAGNNNNNCTT	6 cut(s)	351, 383, 720, 752, 1434, 1466
FaqI	GGGAC	2 cut(s)	456, 1633
FatI	CATG	3 cut(s)	913, 925, 1036
Fnu4HI	GCNGC	4 cut(s)	843, 975, 1068, 1337
FokI	GGATG	8 cut(s)	443, 476, 812, 851, 1070, 1439, 1657, 1856
FriOI	GRGCYC	1 cut(s)	61
Fsp4HI	GCNGC	4 cut(s)	843, 975, 1068, 1337
FspBI	CTAG	5 cut(s)	398, 779, 992, 1236, 1568
GlaI	GCGC	2 cut(s)	6, 40
GluI	GCNGC	4 cut(s)	843, 975, 1068, 1337
GsuI	CTGGAG	1 cut(s)	1140
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	4 cut(s)	148, 813, 1691, 1762
HapII	CCGG	4 cut(s)	81, 102, 1406, 1652
HhaI	GCGC	2 cut(s)	7, 41
Hin1II	CATG	3 cut(s)	917, 929, 1040
Hin6I	GCGC	2 cut(s)	5, 39
HinP1I	GCGC	2 cut(s)	5, 39
HindIII	AAGCTT	1 cut(s)	1592
HinfI	GANTC	6 cut(s)	165, 1169, 1250, 1447, 1457, 1504
HpaII	CCGG	4 cut(s)	81, 102, 1406, 1652
HphI	GGTGA	6 cut(s)	140, 341, 532, 710, 1155, 1240
Hpy166II	GTNNAC	1 cut(s)	78
Hpy188I	TCNGA	8 cut(s)	56, 517, 546, 1288, 1500, 1530, 1555, 1874
Hpy188III	TCNNGA	6 cut(s)	162, 368, 383, 914, 992, 1080
Hpy8I	GTNNAC	1 cut(s)	78
HpyAV	CCTTC	8 cut(s)	54, 74, 383, 413, 605, 671, 782, 1111
HpyCH4III	ACNGT	5 cut(s)	121, 463, 832, 859, 1214
HpyCH4IV	ACGT	1 cut(s)	1790
HpyCH4V	TGCA	7 cut(s)	109, 152, 455, 824, 842, 1391, 1670
HpyF10VI	GCNNNNNNNGC	3 cut(s)	13, 1031, 1577
HpyF3I	CTNAG	8 cut(s)	516, 1285, 1316, 1394, 1552, 1572, 1686, 1843
HpySE526I	ACGT	1 cut(s)	1790
Hsp92II	CATG	3 cut(s)	917, 929, 1040
HspAI	GCGC	2 cut(s)	5, 39
KpnI	GGTACC	1 cut(s)	416
LmnI	GCTCC	2 cut(s)	935, 1159
Lsp1109I	GCAGC	3 cut(s)	854, 986, 1348
LweI	GCATC	5 cut(s)	161, 829, 1034, 1169, 1417
MaeI	CTAG	5 cut(s)	398, 779, 992, 1236, 1568
MaeII	ACGT	1 cut(s)	1790
MaeIII	GTNAC	5 cut(s)	281, 457, 826, 1771, 1865
MboII	GAAGA	8 cut(s)	313, 398, 767, 1083, 1122, 1211, 1298, 1887
MfeI	CAATTG	3 cut(s)	819, 1473, 1509
MflI	RGATCY	4 cut(s)	512, 1088, 1300, 1324
MhlI	GDGCHC	4 cut(s)	61, 139, 1036, 1582
MlsI	TGGCCA	1 cut(s)	813
MluNI	TGGCCA	1 cut(s)	813
MlyI	GAGTC	3 cut(s)	174, 1178, 1498
MmeI	TCCRAC	2 cut(s)	659, 1807
Mox20I	TGGCCA	1 cut(s)	813
MroXI	GAANNNNTTC	3 cut(s)	393, 1203, 1446
MscI	TGGCCA	1 cut(s)	813
MseI	TTAA	4 cut(s)	143, 1329, 1347, 1596
MslI	CAYNNNNRTG	4 cut(s)	659, 930, 1665, 1778
Msp20I	TGGCCA	1 cut(s)	813
MspA1I	CMGCKG	1 cut(s)	845
MspCI	CTTAAG	1 cut(s)	1595
MspI	CCGG	4 cut(s)	81, 102, 1406, 1652
MspR9I	CCNGG	1 cut(s)	1298
MunI	CAATTG	3 cut(s)	819, 1473, 1509
Mva1269I	GAATGC	1 cut(s)	752
MvaI	CCWGG	1 cut(s)	1298
MvnI	CGCG	1 cut(s)	39
MwoI	GCNNNNNNNGC	3 cut(s)	13, 1031, 1577
NlaIII	CATG	3 cut(s)	917, 929, 1040
NlaIV	GGNNCC	2 cut(s)	414, 1302
NmuCI	GTSAC	2 cut(s)	1771, 1865
PagI	TCATGA	1 cut(s)	913
PceI	AGGCCT	1 cut(s)	148
PctI	GAATGC	1 cut(s)	752
PdmI	GAANNNNTTC	3 cut(s)	393, 1203, 1446
PfeI	GAWTC	3 cut(s)	1250, 1447, 1457
PflFI	GACNNNGTC	1 cut(s)	1367
PflMI	CCANNNNNTGG	1 cut(s)	1739
PfoI	TCCNGGA	1 cut(s)	1296
PkrI	GCNGC	4 cut(s)	844, 976, 1069, 1338
PleI	GAGTC	3 cut(s)	173, 1177, 1498
PpsI	GAGTC	3 cut(s)	173, 1177, 1498
PshAI	GACNNNNGTC	2 cut(s)	203, 1494
PsiI	TTATAA	1 cut(s)	1676
Psp124BI	GAGCTC	1 cut(s)	61
Psp6I	CCWGG	1 cut(s)	1296
PspGI	CCWGG	1 cut(s)	1296
PspN4I	GGNNCC	2 cut(s)	414, 1302
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	4 cut(s)	512, 1088, 1300, 1324
PsyI	GACNNNGTC	1 cut(s)	1367
PvuII	CAGCTG	1 cut(s)	845
RsaI	GTAC	5 cut(s)	336, 414, 1042, 1404, 1834
RsaNI	GTAC	5 cut(s)	335, 413, 1041, 1403, 1833
RseI	CAYNNNNRTG	4 cut(s)	659, 930, 1665, 1778
SacI	GAGCTC	1 cut(s)	61
SaqAI	TTAA	4 cut(s)	143, 1329, 1347, 1596
SatI	GCNGC	4 cut(s)	843, 975, 1068, 1337
SchI	GAGTC	3 cut(s)	174, 1178, 1498
ScrFI	CCNGG	1 cut(s)	1298
SduI	GDGCHC	4 cut(s)	61, 139, 1036, 1582
SfaNI	GCATC	5 cut(s)	161, 829, 1034, 1169, 1417
SfcI	CTRYAG	2 cut(s)	1380, 1704
SmiMI	CAYNNNNRTG	4 cut(s)	659, 930, 1665, 1778
SmlI	CTYRAG	3 cut(s)	188, 1134, 1595
SmoI	CTYRAG	3 cut(s)	188, 1134, 1595
SseBI	AGGCCT	1 cut(s)	148
SsiI	CCGC	3 cut(s)	1067, 1523, 1799
SspI	AATATT	1 cut(s)	502
SspMI	CTAG	5 cut(s)	398, 779, 992, 1236, 1568
SstI	GAGCTC	1 cut(s)	61
StuI	AGGCCT	1 cut(s)	148
StyD4I	CCNGG	1 cut(s)	1296
StyI	CCWWGG	4 cut(s)	194, 277, 646, 1612
TaaI	ACNGT	5 cut(s)	121, 463, 832, 859, 1214
TaiI	ACGT	1 cut(s)	1793
TaqI	TCGA	3 cut(s)	19, 94, 465
TatI	WGTACW	1 cut(s)	334
TauI	GCSGC	1 cut(s)	1070
TfiI	GAWTC	3 cut(s)	1250, 1447, 1457
Tru1I	TTAA	4 cut(s)	143, 1329, 1347, 1596
Tru9I	TTAA	4 cut(s)	143, 1329, 1347, 1596
TscAI	CASTG	5 cut(s)	880, 958, 1362, 1398, 1870
TseFI	GTSAC	2 cut(s)	1771, 1865
TseI	GCWGC	3 cut(s)	842, 974, 1336
Tsp45I	GTSAC	2 cut(s)	1771, 1865
TspDTI	ATGAA	7 cut(s)	171, 492, 899, 942, 1092, 1116, 1796
TspGWI	ACGGA	1 cut(s)	737
TspRI	CASTG	5 cut(s)	880, 958, 1362, 1398, 1870
Tth111I	GACNNNGTC	1 cut(s)	1367
Van91I	CCANNNNNTGG	1 cut(s)	1739
Vha464I	CTTAAG	1 cut(s)	1595
XagI	CCTNNNNNAGG	1 cut(s)	755
XapI	RAATTY	6 cut(s)	112, 176, 371, 740, 1218, 1607
XbaI	TCTAGA	1 cut(s)	991
XmnI	GAANNNNTTC	3 cut(s)	393, 1203, 1446
XspI	CTAG	5 cut(s)	398, 779, 992, 1236, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.