Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51170 AT5G51170 AT5G51170 AT5G51170 |
| fragaria_vesca | FvH4_7g26720 FvH4_7g26720 FvH4_7g26720 |
| malus_domestica | MD01G1175500.v1.1 MD07G1241800.v1.1 MD07G1243300.v1.1 MD07G1243700.v1.1 MD07G1244900.v1.1 MD07G1245400.v1.1 |
| prunus_persica | Prupe.2G270700_v2.0.a1 |
| pyrus_communis | pycom07g21820 pycom07g21990 pycom07g22010 |
| rosa_chinensis | RchiOBHm_Chr1g0373311 |
| rosa_laevigata | RLG00000026828 |
| rosa_multiflora | Rmu_ssc0000435.1_g000005 |
| rosa_rugosa | Rorug01G0377000 |
| rosa_samantha | Rh1AG386100 Rh1BG350200 Rh1CG363300 Rh1DG381100 |
| rosa_wichuraiana | Rw1G034890 Rw5G041300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 143 |
| AccII | CGCG | 1 cut(s) | 61 |
| AciI | CCGC | 1 cut(s) | 59 |
| AclWI | GGATC | 3 cut(s) | 50, 63, 163 |
| AcsI | RAATTY | 2 cut(s) | 44, 236 |
| AdeI | CACNNNGTG | 1 cut(s) | 10 |
| AgsI | TTSAA | 2 cut(s) | 125, 190 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 192, 224 |
| AluBI | AGCT | 2 cut(s) | 28, 80 |
| AluI | AGCT | 2 cut(s) | 28, 80 |
| AlwI | GGATC | 3 cut(s) | 50, 63, 163 |
| ApoI | RAATTY | 2 cut(s) | 44, 236 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| BamHI | GGATCC | 1 cut(s) | 55 |
| BccI | CCATC | 1 cut(s) | 155 |
| BmiI | GGNNCC | 1 cut(s) | 57 |
| BoxI | GACNNNNGTC | 1 cut(s) | 139 |
| Bse1I | ACTGG | 1 cut(s) | 180 |
| BseNI | ACTGG | 1 cut(s) | 180 |
| Bsh1236I | CGCG | 1 cut(s) | 61 |
| Bsp143I | GATC | 2 cut(s) | 55, 155 |
| BspACI | CCGC | 1 cut(s) | 59 |
| BspFNI | CGCG | 1 cut(s) | 61 |
| BspLI | GGNNCC | 1 cut(s) | 57 |
| BspPI | GGATC | 3 cut(s) | 50, 63, 163 |
| BsrI | ACTGG | 1 cut(s) | 180 |
| BssMI | GATC | 2 cut(s) | 55, 155 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstFNI | CGCG | 1 cut(s) | 61 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstKTI | GATC | 2 cut(s) | 58, 158 |
| BstMBI | GATC | 2 cut(s) | 55, 155 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 139 |
| BstUI | CGCG | 1 cut(s) | 61 |
| BstX2I | RGATCY | 1 cut(s) | 55 |
| BstYI | RGATCY | 1 cut(s) | 55 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CfoI | GCGC | 1 cut(s) | 63 |
| CviJI | RGCY | 2 cut(s) | 28, 80 |
| CviKI_1 | RGCY | 2 cut(s) | 28, 80 |
| DpnI | GATC | 2 cut(s) | 57, 157 |
| DpnII | GATC | 2 cut(s) | 55, 155 |
| DraIII | CACNNNGTG | 1 cut(s) | 10 |
| FaiI | YATR | 3 cut(s) | 24, 71, 232 |
| FblI | GTMKAC | 1 cut(s) | 143 |
| GlaI | GCGC | 1 cut(s) | 62 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy166II | GTNNAC | 1 cut(s) | 144 |
| Hpy188I | TCNGA | 2 cut(s) | 152, 244 |
| Hpy188III | TCNNGA | 1 cut(s) | 41 |
| Hpy8I | GTNNAC | 1 cut(s) | 144 |
| HpyAV | CCTTC | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HspAI | GCGC | 1 cut(s) | 61 |
| Kzo9I | GATC | 2 cut(s) | 55, 155 |
| LpnPI | CCDG | 2 cut(s) | 54, 193 |
| MaeIII | GTNAC | 3 cut(s) | 92, 159, 182 |
| MalI | GATC | 2 cut(s) | 57, 157 |
| MboI | GATC | 2 cut(s) | 55, 155 |
| MboII | GAAGA | 4 cut(s) | 29, 124, 137, 140 |
| MflI | RGATCY | 1 cut(s) | 55 |
| MluCI | AATT | 3 cut(s) | 44, 103, 236 |
| MnlI | CCTC | 3 cut(s) | 10, 75, 146 |
| MvnI | CGCG | 1 cut(s) | 61 |
| NdeII | GATC | 2 cut(s) | 55, 155 |
| NlaIV | GGNNCC | 1 cut(s) | 57 |
| NmuCI | GTSAC | 1 cut(s) | 92 |
| PshAI | GACNNNNGTC | 1 cut(s) | 139 |
| PspN4I | GGNNCC | 1 cut(s) | 57 |
| PsuI | RGATCY | 1 cut(s) | 55 |
| Sau3AI | GATC | 2 cut(s) | 55, 155 |
| SetI | ASST | 4 cut(s) | 21, 30, 82, 143 |
| SgeI | CNNG | 7 cut(s) | 17, 53, 64, 72, 93, 121, 192 |
| Sse9I | AATT | 3 cut(s) | 44, 103, 236 |
| SsiI | CCGC | 1 cut(s) | 59 |
| TaqI | TCGA | 1 cut(s) | 198 |
| TasI | AATT | 3 cut(s) | 44, 103, 236 |
| TseFI | GTSAC | 1 cut(s) | 92 |
| Tsp45I | GTSAC | 1 cut(s) | 92 |
| TspGWI | ACGGA | 1 cut(s) | 97 |
| XapI | RAATTY | 2 cut(s) | 44, 236 |
| XmiI | GTMKAC | 1 cut(s) | 143 |