Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004621

Physical Location & Seq

Genomic Coordinates Forward (+)

49056567 .. 49061527

Gene Structure 4961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0377000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGCCACCGATTCAAAAATTCTCCCTCCGCGGCGCGCAATTGGGTAAACCCTCCTCCTCCGCCATGGCGAGCGCGAAGCCCAAGCCCGACGACGAGTCGTGCTCGCGCTCGATCAGCGAGACCGTCAACGGCTCCCACCGCTTCACCATAAAGGGCTATTCTTTGGCCAAAGGCATGGGCGCCGGTAAATACATACTCAGCGACACCTTCACCGTCGGCGGTTACGATTGGGCCATTTACTTTTACCCCGACGGGAAAAACCCCGAGGATAGCTCCGTCTACGTCTCCGTTTTCATTGCGCTGGTGAGTGAGGGCACCGATGTGAGGGCTTTGTTCGAGCTCACTTTGGTGGACCAGAGCAACAGTGGCAAGGACAAGGTGCATAGCCACTTTGATCGTGCCCTAGAGAGCGGGCCCTACACGTTGAAGTACAGAGGCAGCATGTGGGGTTACAAGCGATTTTTCAGAAGAGCAGCCCTTGAAACTTCCGAGTTTCTAAAGGATGATTCCCTTGTGTTGAACTGCACTGTTGGAGTTGTCAGAACTCGTCTCGAGTGTCCAAAACAATTTGCAATTACTGTACCACCATCAGACATGGGTGAAGGTCTTAAGGCTTTTCTAGATTCTGGAGCTGGTTGCGACGTAGTTTTTCAGGTTGGTGATGAGCAATTTAAAGCTCACAAGTTGATACTTGCTGCTCGTTCTCCTGTATTCAAAGCACAGTTTTTTGGACACCTTGGTGATTCGAGTGTAGATAAAGTAGTCGTGAAGGATGTTGAGCCCTTTATCTTCAAGGCAATGCTTCTGTTTATTTACGCGGACAAGCTTCCTGATATACGTGAAGTTACAGGTTCATCATCTTTGTGCACATTCACTATCATGGTGCAGCATCTGTTGGCTGCTGCAGACCTGTATAACCTAGAGCGACTGAAGTTGCTGTGTGAATCAAAGTTGTGTGAAGAAATCACTACTGAAACAGTGGCAACCACACTGGCCCTTGCTGAGCAGCATCACTGTCCACAGCTGAAGGCTGTGTGTCTAAAATTTGCAGCAAAGTCGACAAACTTGGGAGCTGTAATGCAGTCAGATGGATACAAGCATCTAGAAGAGAGCTGCCCCTCAGTGTTACAGGAGCTACTGAAGACATTTGCATCAGTTGATGCAAATGAAAATTCAAGTTCAAGTAAGAAGAGGAGTGGCAGCAGCATATATGGGCTAGACTTGCCAGCAGATGGCAGTGGGGCTGTAGCAGAATCAGCAAATCCCAATGGCAGGCGGTTGAGGCCGCGGCGATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009507 GO:0009536 GO:0009889 GO:0009891 GO:0009893 GO:0019216 GO:0019222 GO:0019747 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031647 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045828 GO:0045834 GO:0046889 GO:0046890 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050821 GO:0065007 GO:0065008 GO:0080090 GO:1904143

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

432

Amino Acids

47.25

Weight (kDa)

7.54

Isoelectric Point (pI)

40.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	45 - 177	5.7e-31	MATH domain
BTB	PF00651	204 - 320	6.8e-24	BTB/POZ domain
BACK_BPM_SPOP	PF24570	326 - 380	1.1e-28	BPM/SPOP, BACK domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004621)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61670 AT5G61670
fragaria_vesca	FvH4_7g26730 FvH4_7g26730 FvH4_7g26730
malus_domestica	MD01G1175600.v1.1 MD04G1149100.v1.1 MD07G1241900.v1.1 MD07G1243400.v1.1 MD07G1243800.v1.1 MD07G1243900.v1.1 MD07G1244500.v1.1 MD07G1245000.v1.1 MD07G1245500.v1.1 MD07G1245900.v1.1
prunus_persica	Prupe.2G270800_v2.0.a1
pyrus_communis	pycom01g18650 pycom07g21830 pycom07g21900 pycom07g22020
rosa_chinensis	RchiOBHm_Chr1g0373321
rosa_laevigata	RLG00000026827
rosa_multiflora	Rmu_sc0031228.1_g000001 Rmu_ssc0000435.1_g000006
rosa_roxburghii	Rroxscaffold_4G00284270
rosa_rugosa	Rorug01G0377000
rosa_samantha	Rh1AG386200 Rh1BG350300 Rh1CG363400 Rh1DG381200
rosa_wichuraiana	Rw1G034880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	179, 314
AccB7I	CCANNNNNTGG	1 cut(s)	1232
AccBSI	CCGCTC	1 cut(s)	411
AccI	GTMKAC	2 cut(s)	279, 1058
AccII	CGCG	6 cut(s)	30, 35, 74, 106, 818, 1288
AcoI	YGGCCR	1 cut(s)	165
AcsI	RAATTY	3 cut(s)	17, 1043, 1171
AcuI	CTGAAG	3 cut(s)	950, 1046, 1160
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	2 cut(s)	431, 582
AfiI	CCNNNNNNNGG	3 cut(s)	324, 1232, 1272
AflII	CTTAAG	1 cut(s)	608
AflIII	ACRYGT	1 cut(s)	420
AgsI	TTSAA	8 cut(s)	14, 427, 482, 520, 715, 793, 1176, 1182
AhdI	GACNNNNNGTC	1 cut(s)	94
AleI	CACNNNNGTG	3 cut(s)	320, 347, 738
AluBI	AGCT	9 cut(s)	273, 340, 632, 677, 826, 1024, 1073, 1113, 1135
AluI	AGCT	9 cut(s)	273, 340, 632, 677, 826, 1024, 1073, 1113, 1135
Alw21I	GWGCWC	3 cut(s)	104, 342, 869
Alw26I	GTCTC	3 cut(s)	113, 289, 554
Alw44I	GTGCAC	1 cut(s)	865
AlwNI	CAGNNNCTG	1 cut(s)	892
Ama87I	CYCGRG	2 cut(s)	263, 551
AoxI	GGCC	5 cut(s)	165, 231, 413, 993, 1283
ApaI	GGGCCC	1 cut(s)	417
ApaLI	GTGCAC	1 cut(s)	865
ApoI	RAATTY	3 cut(s)	17, 1043, 1171
AspLEI	GCGC	6 cut(s)	35, 37, 74, 108, 182, 301
AspS9I	GGNCC	5 cut(s)	231, 352, 413, 414, 994
AsuHPI	GGTGA	6 cut(s)	136, 202, 316, 611, 671, 752
AvaI	CYCGRG	2 cut(s)	263, 551
AvaII	GGWCC	1 cut(s)	352
BaeGI	GKGCMC	4 cut(s)	317, 403, 417, 869
BalI	TGGCCA	1 cut(s)	167
BanI	GGYRCC	2 cut(s)	179, 314
BanII	GRGCYC	3 cut(s)	342, 417, 783
BbsI	GAAGAC	1 cut(s)	1148
Bbv12I	GWGCWC	3 cut(s)	104, 342, 869
BccI	CCATC	3 cut(s)	595, 1082, 1226
BceAI	ACGGC	1 cut(s)	145
BcgI	CGANNNNNNTGC	2 cut(s)	1038, 1072
BciVI	GTATCC	1 cut(s)	1085
BcoDI	GTCTC	3 cut(s)	113, 289, 554
BfaI	CTAG	5 cut(s)	404, 620, 920, 1103, 1217
BfmI	CTRYAG	2 cut(s)	903, 1245
BfoI	RGCGCY	1 cut(s)	183
BfrI	CTTAAG	1 cut(s)	608
BfuI	GTATCC	1 cut(s)	1085
BlpI	GCTNAGC	1 cut(s)	1002
Bme18I	GGWCC	1 cut(s)	352
BmeRI	GACNNNNNGTC	1 cut(s)	94
BmeT110I	CYCGRG	2 cut(s)	263, 551
BmgT120I	GGNCC	5 cut(s)	231, 352, 413, 414, 994
BmiI	GGNNCC	4 cut(s)	133, 181, 316, 415
BmsI	GCATC	5 cut(s)	898, 1018, 1108, 1150, 1160
BpiI	GAAGAC	1 cut(s)	1148
BplI	GAGNNNNNCTC	4 cut(s)	86, 118, 257, 289
BpmI	CTGGAG	1 cut(s)	648
Bpu1102I	GCTNAGC	1 cut(s)	1002
BsaAI	YACGTR	1 cut(s)	839
BsaHI	GRCGYC	1 cut(s)	180
BsaI	GGTCTC	1 cut(s)	113
BsaJI	CCNNGG	5 cut(s)	28, 63, 264, 736, 1286
Bsc4I	CCNNNNNNNGG	3 cut(s)	324, 1232, 1272
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	1 cut(s)	996
Bse3DI	GCAATG	2 cut(s)	294, 804
BseDI	CCNNGG	5 cut(s)	28, 63, 264, 736, 1286
BseGI	GGATG	2 cut(s)	508, 778
BseLI	CCNNNNNNNGG	3 cut(s)	324, 1232, 1272
BseMI	GCAATG	2 cut(s)	294, 804
BseMII	CTCAG	3 cut(s)	211, 993, 1134
BseNI	ACTGG	1 cut(s)	996
BsePI	GCGCGC	1 cut(s)	33
BseRI	GAGGAG	3 cut(s)	43, 46, 1207
BseSI	GKGCMC	4 cut(s)	317, 403, 417, 869
BsgI	GTGCAG	2 cut(s)	508, 905
Bsh1236I	CGCG	6 cut(s)	30, 35, 74, 106, 818, 1288
BshFI	GGCC	5 cut(s)	167, 233, 415, 995, 1285
BshNI	GGYRCC	2 cut(s)	179, 314
BsiHKAI	GWGCWC	3 cut(s)	104, 342, 869
BsiHKCI	CYCGRG	2 cut(s)	263, 551
BsiSI	CCGG	1 cut(s)	183
BslI	CCNNNNNNNGG	3 cut(s)	324, 1232, 1272
BsmAI	GTCTC	3 cut(s)	113, 289, 554
BsmBI	CGTCTC	2 cut(s)	289, 554
BsnI	GGCC	5 cut(s)	167, 233, 415, 995, 1285
Bso31I	GGTCTC	1 cut(s)	113
BsoBI	CYCGRG	2 cut(s)	263, 551
Bsp120I	GGGCCC	1 cut(s)	413
Bsp1286I	GDGCHC	7 cut(s)	104, 317, 342, 403, 417, 783, 869
Bsp143I	GATC	2 cut(s)	111, 394
Bsp1720I	GCTNAGC	1 cut(s)	1002
Bsp19I	CCATGG	1 cut(s)	63
BspANI	GGCC	5 cut(s)	167, 233, 415, 995, 1285
BspCNI	CTCAG	3 cut(s)	210, 994, 1133
BspFNI	CGCG	6 cut(s)	30, 35, 74, 106, 818, 1288
BspLI	GGNNCC	4 cut(s)	133, 181, 316, 415
BspMAI	CTGCAG	1 cut(s)	907
BspQI	GCTCTTC	1 cut(s)	463
BspT107I	GGYRCC	2 cut(s)	179, 314
BspTI	CTTAAG	1 cut(s)	608
BspTNI	GGTCTC	1 cut(s)	113
BsrBI	CCGCTC	1 cut(s)	411
BsrDI	GCAATG	2 cut(s)	294, 804
BsrFI	RCCGGY	1 cut(s)	182
BsrI	ACTGG	1 cut(s)	996
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	5 cut(s)	28, 63, 264, 736, 1286
BssHII	GCGCGC	1 cut(s)	33
BssMI	GATC	2 cut(s)	111, 394
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	2 cut(s)	63, 736
Bst4CI	ACNGT	8 cut(s)	124, 214, 365, 529, 580, 723, 979, 1016
Bst6I	CTCTTC	3 cut(s)	463, 1101, 1184
BstACI	GRCGYC	1 cut(s)	180
BstAFI	CTTAAG	1 cut(s)	608
BstBAI	YACGTR	1 cut(s)	839
BstC8I	GCNNGC	6 cut(s)	35, 70, 104, 413, 1227, 1274
BstDEI	CTNAG	3 cut(s)	197, 1002, 1120
BstDSI	CCRYGG	3 cut(s)	28, 63, 1286
BstF5I	GGATG	2 cut(s)	508, 778
BstFNI	CGCG	6 cut(s)	30, 35, 74, 106, 818, 1288
BstH2I	RGCGCY	1 cut(s)	183
BstHHI	GCGC	6 cut(s)	35, 37, 74, 108, 182, 301
BstKTI	GATC	2 cut(s)	114, 397
BstMAI	GTCTC	3 cut(s)	113, 289, 554
BstMBI	GATC	2 cut(s)	111, 394
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 138, 366, 1222, 1256, 1282
BstNSI	RCATGY	1 cut(s)	445
BstSFI	CTRYAG	2 cut(s)	903, 1245
BstSLI	GKGCMC	4 cut(s)	317, 403, 417, 869
BstUI	CGCG	6 cut(s)	30, 35, 74, 106, 818, 1288
BstV2I	GAAGAC	1 cut(s)	1148
BstXI	CCANNNNNNTGG	1 cut(s)	175
BsuI	GTATCC	1 cut(s)	1085
BsuRI	GGCC	5 cut(s)	167, 233, 415, 995, 1285
BtgI	CCRYGG	3 cut(s)	28, 63, 1286
BtsCI	GGATG	2 cut(s)	508, 778
BtsI	GCAGTG	1 cut(s)	1243
BtsIMutI	CAGTG	7 cut(s)	370, 525, 984, 989, 1012, 1128, 1243
Cac8I	GCNNGC	6 cut(s)	35, 70, 104, 413, 1227, 1274
CaiI	CAGNNNCTG	1 cut(s)	892
CfoI	GCGC	6 cut(s)	35, 37, 74, 108, 182, 301
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	5 cut(s)	231, 352, 413, 414, 994
Cfr42I	CCGCGG	2 cut(s)	31, 1289
Csp6I	GTAC	2 cut(s)	430, 581
CviAII	CATG	5 cut(s)	64, 175, 442, 595, 880
CviQI	GTAC	2 cut(s)	430, 581
DdeI	CTNAG	3 cut(s)	197, 1002, 1120
DinI	GGCGCC	1 cut(s)	181
DpnI	GATC	2 cut(s)	113, 396
DpnII	GATC	2 cut(s)	111, 394
DraI	TTTAAA	1 cut(s)	673
DriI	GACNNNNNGTC	1 cut(s)	94
EaeI	YGGCCR	1 cut(s)	165
Eam1104I	CTCTTC	3 cut(s)	463, 1101, 1184
Eam1105I	GACNNNNNGTC	1 cut(s)	94
EarI	CTCTTC	3 cut(s)	463, 1101, 1184
EciI	GGCGGA	1 cut(s)	49
Ecl136II	GAGCTC	1 cut(s)	340
Eco130I	CCWWGG	2 cut(s)	63, 736
Eco24I	GRGCYC	3 cut(s)	342, 417, 783
Eco31I	GGTCTC	1 cut(s)	113
Eco47I	GGWCC	1 cut(s)	352
Eco53kI	GAGCTC	1 cut(s)	340
Eco57I	CTGAAG	3 cut(s)	950, 1046, 1160
Eco88I	CYCGRG	2 cut(s)	263, 551
EcoICRI	GAGCTC	1 cut(s)	340
EcoO109I	RGGNCCY	1 cut(s)	414
EcoT14I	CCWWGG	2 cut(s)	63, 736
EcoT38I	GRGCYC	3 cut(s)	342, 417, 783
EgeI	GGCGCC	1 cut(s)	181
EheI	GGCGCC	1 cut(s)	181
ErhI	CCWWGG	2 cut(s)	63, 736
Esp3I	CGTCTC	2 cut(s)	289, 554
FaeI	CATG	5 cut(s)	67, 178, 445, 598, 883
FatI	CATG	5 cut(s)	63, 174, 441, 594, 879
FauI	CCCGC	1 cut(s)	404
FblI	GTMKAC	2 cut(s)	279, 1058
FokI	GGATG	2 cut(s)	515, 785
FriOI	GRGCYC	3 cut(s)	342, 417, 783
FspBI	CTAG	5 cut(s)	404, 620, 920, 1103, 1217
GlaI	GCGC	6 cut(s)	34, 36, 73, 107, 181, 300
GsuI	CTGGAG	1 cut(s)	648
HaeII	RGCGCY	1 cut(s)	183
HaeIII	GGCC	5 cut(s)	167, 233, 415, 995, 1285
HapII	CCGG	1 cut(s)	183
HhaI	GCGC	6 cut(s)	35, 37, 74, 108, 182, 301
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	5 cut(s)	67, 178, 445, 598, 883
Hin6I	GCGC	6 cut(s)	33, 35, 72, 106, 180, 299
HinP1I	GCGC	6 cut(s)	33, 35, 72, 106, 180, 299
HincII	GTYRAC	2 cut(s)	127, 1059
HindII	GTYRAC	2 cut(s)	127, 1059
HindIII	AAGCTT	1 cut(s)	824
HinfI	GANTC	7 cut(s)	10, 95, 506, 623, 743, 944, 1253
HpaII	CCGG	1 cut(s)	183
HphI	GGTGA	6 cut(s)	136, 202, 316, 611, 671, 752
Hpy166II	GTNNAC	7 cut(s)	47, 127, 280, 352, 867, 1019, 1059
Hpy188I	TCNGA	5 cut(s)	467, 490, 542, 592, 1087
Hpy188III	TCNNGA	6 cut(s)	551, 620, 627, 766, 830, 1103
Hpy8I	GTNNAC	7 cut(s)	47, 127, 280, 352, 867, 1019, 1059
Hpy99I	CGWCG	5 cut(s)	92, 95, 218, 254, 644
HpyAV	CCTTC	4 cut(s)	217, 596, 763, 1021
HpyCH4III	ACNGT	8 cut(s)	124, 214, 365, 529, 580, 723, 979, 1016
HpyCH4IV	ACGT	4 cut(s)	282, 422, 642, 838
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 138, 366, 1222, 1256, 1282
HpyF3I	CTNAG	3 cut(s)	197, 1002, 1120
HpySE526I	ACGT	4 cut(s)	282, 422, 642, 838
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	5 cut(s)	67, 178, 445, 598, 883
HspAI	GCGC	6 cut(s)	33, 35, 72, 106, 180, 299
KasI	GGCGCC	1 cut(s)	179
KspI	CCGCGG	2 cut(s)	31, 1289
Kzo9I	GATC	2 cut(s)	111, 394
LguI	GCTCTTC	1 cut(s)	463
LmnI	GCTCC	5 cut(s)	137, 278, 629, 1070, 1132
LweI	GCATC	5 cut(s)	898, 1018, 1108, 1150, 1160
MaeI	CTAG	5 cut(s)	404, 620, 920, 1103, 1217
MaeII	ACGT	4 cut(s)	282, 422, 642, 838
MaeIII	GTNAC	4 cut(s)	221, 449, 844, 1125
MalI	GATC	2 cut(s)	113, 396
MbiI	CCGCTC	1 cut(s)	411
MboI	GATC	2 cut(s)	111, 394
MboII	GAAGA	6 cut(s)	480, 781, 971, 1118, 1153, 1201
MfeI	CAATTG	1 cut(s)	38
MhlI	GDGCHC	7 cut(s)	104, 317, 342, 403, 417, 783, 869
MlsI	TGGCCA	1 cut(s)	167
MluCI	AATT	7 cut(s)	17, 38, 566, 573, 668, 1043, 1171
MluNI	TGGCCA	1 cut(s)	167
Mly113I	GGCGCC	1 cut(s)	180
MlyI	GAGTC	1 cut(s)	104
MmeI	TCCRAC	1 cut(s)	511
Mox20I	TGGCCA	1 cut(s)	167
MscI	TGGCCA	1 cut(s)	167
MseI	TTAA	3 cut(s)	609, 672, 1297
MslI	CAYNNNNRTG	5 cut(s)	320, 347, 738, 862, 878
Msp20I	TGGCCA	1 cut(s)	167
MspA1I	CMGCKG	3 cut(s)	30, 1024, 1288
MspCI	CTTAAG	1 cut(s)	608
MspI	CCGG	1 cut(s)	183
MunI	CAATTG	1 cut(s)	38
MvnI	CGCG	6 cut(s)	30, 35, 74, 106, 818, 1288
MwoI	GCNNNNNNNGC	6 cut(s)	114, 138, 366, 1222, 1256, 1282
NarI	GGCGCC	1 cut(s)	180
NcoI	CCATGG	1 cut(s)	63
NdeII	GATC	2 cut(s)	111, 394
NlaIII	CATG	5 cut(s)	67, 178, 445, 598, 883
NlaIV	GGNNCC	4 cut(s)	133, 181, 316, 415
NspI	RCATGY	1 cut(s)	445
OliI	CACNNNNGTG	3 cut(s)	320, 347, 738
PaeR7I	CTCGAG	1 cut(s)	551
PauI	GCGCGC	1 cut(s)	33
PciSI	GCTCTTC	1 cut(s)	463
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PfeI	GAWTC	6 cut(s)	10, 506, 623, 743, 944, 1253
PflMI	CCANNNNNTGG	1 cut(s)	1232
PleI	GAGTC	1 cut(s)	103
PluTI	GGCGCC	1 cut(s)	183
PpsI	GAGTC	1 cut(s)	103
Ppu21I	YACGTR	1 cut(s)	839
Psp124BI	GAGCTC	1 cut(s)	342
PspN4I	GGNNCC	4 cut(s)	133, 181, 316, 415
PspOMI	GGGCCC	1 cut(s)	413
PspPI	GGNCC	5 cut(s)	231, 352, 413, 414, 994
PstI	CTGCAG	1 cut(s)	907
PstNI	CAGNNNCTG	1 cut(s)	892
PteI	GCGCGC	1 cut(s)	33
PvuII	CAGCTG	1 cut(s)	1024
RsaI	GTAC	2 cut(s)	431, 582
RsaNI	GTAC	2 cut(s)	430, 581
RseI	CAYNNNNRTG	5 cut(s)	320, 347, 738, 862, 878
SacI	GAGCTC	1 cut(s)	342
SacII	CCGCGG	2 cut(s)	31, 1289
SalI	GTCGAC	1 cut(s)	1057
SapI	GCTCTTC	1 cut(s)	463
SaqAI	TTAA	3 cut(s)	609, 672, 1297
Sau3AI	GATC	2 cut(s)	111, 394
Sau96I	GGNCC	5 cut(s)	231, 352, 413, 414, 994
SchI	GAGTC	1 cut(s)	104
SduI	GDGCHC	7 cut(s)	104, 317, 342, 403, 417, 783, 869
SfaNI	GCATC	5 cut(s)	898, 1018, 1108, 1150, 1160
SfcI	CTRYAG	2 cut(s)	903, 1245
SfoI	GGCGCC	1 cut(s)	181
Sfr274I	CTCGAG	1 cut(s)	551
Sfr303I	CCGCGG	2 cut(s)	31, 1289
SgrBI	CCGCGG	2 cut(s)	31, 1289
SinI	GGWCC	1 cut(s)	352
SlaI	CTCGAG	1 cut(s)	551
SmiMI	CAYNNNNRTG	5 cut(s)	320, 347, 738, 862, 878
SmlI	CTYRAG	2 cut(s)	551, 608
SmoI	CTYRAG	2 cut(s)	551, 608
Sse9I	AATT	7 cut(s)	17, 38, 566, 573, 668, 1043, 1171
SspDI	GGCGCC	1 cut(s)	179
SspMI	CTAG	5 cut(s)	404, 620, 920, 1103, 1217
SstI	GAGCTC	1 cut(s)	342
StyI	CCWWGG	2 cut(s)	63, 736
TaaI	ACNGT	8 cut(s)	124, 214, 365, 529, 580, 723, 979, 1016
TaiI	ACGT	4 cut(s)	285, 425, 645, 841
TaqI	TCGA	5 cut(s)	110, 336, 552, 746, 1058
TasI	AATT	7 cut(s)	17, 38, 566, 573, 668, 1043, 1171
TatI	WGTACW	1 cut(s)	429
TauI	GCSGC	3 cut(s)	33, 1288, 1291
TfiI	GAWTC	6 cut(s)	10, 506, 623, 743, 944, 1253
Tru1I	TTAA	3 cut(s)	609, 672, 1297
Tru9I	TTAA	3 cut(s)	609, 672, 1297
TscAI	CASTG	7 cut(s)	370, 532, 984, 996, 1019, 1128, 1243
TspDTI	ATGAA	3 cut(s)	283, 843, 1182
TspGWI	ACGGA	2 cut(s)	265, 277
TspRI	CASTG	7 cut(s)	370, 532, 984, 996, 1019, 1128, 1243
Van91I	CCANNNNNTGG	1 cut(s)	1232
Vha464I	CTTAAG	1 cut(s)	608
VneI	GTGCAC	1 cut(s)	865
VpaK11BI	GGWCC	1 cut(s)	352
XapI	RAATTY	3 cut(s)	17, 1043, 1171
XbaI	TCTAGA	2 cut(s)	619, 1102
XceI	RCATGY	1 cut(s)	445
XcmI	CCANNNNNNNNNTGG	1 cut(s)	362
XhoI	CTCGAG	1 cut(s)	551
XmiI	GTMKAC	2 cut(s)	279, 1058
XspI	CTAG	5 cut(s)	404, 620, 920, 1103, 1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.