Prupe.2G270800_v2.0.a1

Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
27490067 .. 27492659
2593 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G270800.1

Sequence Viewer

Length: 936 bp
ATGCTCTGTTCGGGTCGACTTTTGGCGGTTTCGTTTCCAGTAAACCGGTATTTTCCGTACAATTTACAGAGCTCCAGCTCCAGATTCAGCTACGCAAGCCCCAAATCGATCTCCAGATGGCGATCAATGACGTCCGAGCCCGAGTCCTCTTCTTTTGCTCCTTCTATCGACTCCGATCCCACTGATACAAACCCCGCCGGATTCTGTATCATAGAGGGGCCTGAAACAGTCCAAGACTTTGCCAAAATGGAGTTGCAAGAAATTCAGGATAATATTCGAAGTCGACGCAACAAAATTTTCTTGCATATGGAGGAGGTTCGCAGGCTGAGGATACAACAGAGGATTAAAAGCGCAGAGCTTGGAATGTTAAGTGAAGATCAAGAAAATGAACTTCCTAGTTTCCCATCTTTCATTCCATTCTTGCCTCCCCTGAGTTCAGACAACCTTAAGCAGTATTATGTTGTTTGTTATTCAATTATCACGGCGTTTATTCTTTTCGGTGGCCTCCTAGCACCCACTTTGGAGTTGAAACTGGGAATAGGAGGCACCTCATACAAAGATTTTATAGAAAGTGTGCATCTGCCATTGCAGTTGAGTCAAGTTGATCCCATAGTGGCATCCTTCTCTGGAGGAGCAGTTGGTGTCATCTCCGCATTGATGATTGTTGAAATTAACAACGTAAAACAGCAGGAGCAAAAAAGATGCAAATATTGTGTTGGAACTGGATATCTTGCTTGTGCCCGCTGTTCAAGCACAGGAACCCTGGTTCTTACCGAACCAATATCAGCAGTCGATGGAGATCAGCCCCTATCACTGCCGAAAGCGGAAAGATGTTCAAATTGCTCAGGAGCGGGAAAGGTAATGTGCCCTACATGCCTTTGCACAGGAATGGCGATGGCAAGCGAACATGACCCTCGGATCGATCCTTTTGATTAG

Protein Analysis

312

Amino Acids

34.21

Weight (kDa)

5.4

Isoelectric Point (pI)

64.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 134
AccB1I GGYRCC 1 cut(s) 545
AccBSI CCGCTC 1 cut(s) 851
AccI GTMKAC 2 cut(s) 16, 283
AciI CCGC 6 cut(s) 26, 195, 651, 742, 824, 851
AclWI GGATC 4 cut(s) 170, 599, 917, 926
AcsI RAATTY 2 cut(s) 261, 294
AcyI GRCGYC 1 cut(s) 131
AfaI GTAC 1 cut(s) 59
AflII CTTAAG 1 cut(s) 446
AgeI ACCGGT 1 cut(s) 45
AgsI TTSAA 5 cut(s) 474, 529, 668, 750, 837
AjnI CCWGG 1 cut(s) 762
AloI GAACNNNNNNTCC 2 cut(s) 750, 782
AluBI AGCT 4 cut(s) 72, 78, 90, 358
AluI AGCT 4 cut(s) 72, 78, 90, 358
Alw21I GWGCWC 1 cut(s) 74
AlwI GGATC 4 cut(s) 170, 599, 917, 926
Ama87I CYCGRG 1 cut(s) 140
AoxI GGCC 2 cut(s) 218, 502
ApoI RAATTY 2 cut(s) 261, 294
AsiGI ACCGGT 1 cut(s) 45
AspLEI GCGC 1 cut(s) 353
AspS9I GGNCC 1 cut(s) 218
AsuII TTCGAA 1 cut(s) 277
AvaI CYCGRG 1 cut(s) 140
BaeGI GKGCMC 2 cut(s) 742, 869
BanI GGYRCC 1 cut(s) 545
BanII GRGCYC 2 cut(s) 74, 141
Bbv12I GWGCWC 1 cut(s) 74
BbvCI CCTCAGC 1 cut(s) 326
BccI CCATC 4 cut(s) 111, 412, 788, 889
BceAI ACGGC 1 cut(s) 498
BciT130I CCWGG 1 cut(s) 764
BciVI GTATCC 1 cut(s) 324
BfaI CTAG 2 cut(s) 396, 509
BfrI CTTAAG 1 cut(s) 446
BfuI GTATCC 1 cut(s) 324
Bme1390I CCNGG 1 cut(s) 764
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 218
BmiI GGNNCC 3 cut(s) 219, 547, 760
BmrFI CCNGG 1 cut(s) 764
BmrI ACTGGG 1 cut(s) 542
BmsI GCATC 3 cut(s) 586, 626, 692
BmuI ACTGGG 1 cut(s) 542
BpmI CTGGAG 4 cut(s) 58, 64, 97, 648
Bpu10I CCTNAGC 2 cut(s) 326, 844
Bpu14I TTCGAA 1 cut(s) 277
Bsa29I ATCGAT 2 cut(s) 107, 921
BsaBI GATNNNNATC 2 cut(s) 121, 798
BsaHI GRCGYC 1 cut(s) 131
BsaJI CCNNGG 2 cut(s) 762, 914
BsaWI WCCGGW 1 cut(s) 45
BsaXI ACNNNNNCTCC 2 cut(s) 621, 651
Bse118I RCCGGY 1 cut(s) 45
Bse1I ACTGG 3 cut(s) 38, 537, 727
Bse3DI GCAATG 1 cut(s) 584
Bse8I GATNNNNATC 2 cut(s) 121, 798
BseBI CCWGG 1 cut(s) 764
BseCI ATCGAT 2 cut(s) 107, 921
BseDI CCNNGG 2 cut(s) 762, 914
BseGI GGATG 1 cut(s) 617
BseJI GATNNNNATC 2 cut(s) 121, 798
BseMI GCAATG 1 cut(s) 584
BseMII CTCAG 3 cut(s) 317, 422, 858
BseNI ACTGG 3 cut(s) 38, 537, 727
BseRI GAGGAG 2 cut(s) 326, 645
BseSI GKGCMC 2 cut(s) 742, 869
BshFI GGCC 2 cut(s) 220, 504
BshNI GGYRCC 1 cut(s) 545
BshTI ACCGGT 1 cut(s) 45
BshVI ATCGAT 2 cut(s) 107, 921
BsiHKAI GWGCWC 1 cut(s) 74
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 2 cut(s) 46, 198
BsnI GGCC 2 cut(s) 220, 504
BsoBI CYCGRG 1 cut(s) 140
Bsp119I TTCGAA 1 cut(s) 277
Bsp1286I GDGCHC 4 cut(s) 74, 141, 742, 869
Bsp143I GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
BspACI CCGC 6 cut(s) 26, 195, 651, 742, 824, 851
BspANI GGCC 2 cut(s) 220, 504
BspCNI CTCAG 3 cut(s) 318, 423, 857
BspDI ATCGAT 2 cut(s) 107, 921
BspLI GGNNCC 3 cut(s) 219, 547, 760
BspPI GGATC 4 cut(s) 170, 599, 917, 926
BspT104I TTCGAA 1 cut(s) 277
BspT107I GGYRCC 1 cut(s) 545
BspTI CTTAAG 1 cut(s) 446
BsrBI CCGCTC 1 cut(s) 851
BsrDI GCAATG 1 cut(s) 584
BsrFI RCCGGY 1 cut(s) 45
BsrI ACTGG 3 cut(s) 38, 537, 727
BssAI RCCGGY 1 cut(s) 45
BssECI CCNNGG 2 cut(s) 762, 914
BssMI GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
BssNI GRCGYC 1 cut(s) 131
Bst2UI CCWGG 1 cut(s) 764
Bst4CI ACNGT 1 cut(s) 229
Bst6I CTCTTC 1 cut(s) 154
BstACI GRCGYC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 446
BstBI TTCGAA 1 cut(s) 277
BstC8I GCNNGC 4 cut(s) 97, 323, 742, 901
BstDEI CTNAG 3 cut(s) 326, 431, 844
BstF5I GGATG 1 cut(s) 617
BstHHI GCGC 1 cut(s) 353
BstKTI GATC 8 cut(s) 111, 125, 178, 379, 607, 802, 921, 925
BstMBI GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
BstMWI GCNNNNNNNGC 3 cut(s) 96, 750, 873
BstNI CCWGG 1 cut(s) 764
BstNSI RCATGY 1 cut(s) 876
BstSCI CCNGG 1 cut(s) 762
BstSLI GKGCMC 2 cut(s) 742, 869
Bsu15I ATCGAT 2 cut(s) 107, 921
BsuI GTATCC 1 cut(s) 324
BsuRI GGCC 2 cut(s) 220, 504
BsuTUI ATCGAT 2 cut(s) 107, 921
BtgZI GCGATG 1 cut(s) 908
BtsCI GGATG 1 cut(s) 617
BtsI GCAGTG 1 cut(s) 812
BtsIMutI CAGTG 2 cut(s) 180, 812
Cac8I GCNNGC 4 cut(s) 97, 323, 742, 901
CfoI GCGC 1 cut(s) 353
Cfr10I RCCGGY 1 cut(s) 45
Cfr13I GGNCC 1 cut(s) 218
ClaI ATCGAT 2 cut(s) 107, 921
CseI GACGC 1 cut(s) 294
Csp6I GTAC 1 cut(s) 58
CspAI ACCGGT 1 cut(s) 45
CviAII CATG 2 cut(s) 873, 908
CviQI GTAC 1 cut(s) 58
DdeI CTNAG 3 cut(s) 326, 431, 844
DpnI GATC 8 cut(s) 110, 124, 177, 378, 606, 801, 920, 924
DpnII GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
Eam1104I CTCTTC 1 cut(s) 154
EarI CTCTTC 1 cut(s) 154
Ecl136II GAGCTC 1 cut(s) 72
Eco24I GRGCYC 2 cut(s) 74, 141
Eco32I GATATC 1 cut(s) 728
Eco53kI GAGCTC 1 cut(s) 72
Eco88I CYCGRG 1 cut(s) 140
EcoICRI GAGCTC 1 cut(s) 72
EcoO109I RGGNCCY 1 cut(s) 218
EcoRII CCWGG 1 cut(s) 762
EcoRV GATATC 1 cut(s) 728
EcoT38I GRGCYC 2 cut(s) 74, 141
FaeI CATG 2 cut(s) 876, 911
FaiI YATR 9 cut(s) 212, 306, 308, 459, 553, 566, 611, 874, 909
FatI CATG 2 cut(s) 872, 907
FauI CCCGC 3 cut(s) 202, 749, 844
FauNDI CATATG 1 cut(s) 306
FblI GTMKAC 2 cut(s) 16, 283
FokI GGATG 1 cut(s) 604
FriOI GRGCYC 2 cut(s) 74, 141
FspBI CTAG 2 cut(s) 396, 509
GlaI GCGC 1 cut(s) 352
GsuI CTGGAG 4 cut(s) 58, 64, 97, 648
HaeIII GGCC 2 cut(s) 220, 504
HapII CCGG 2 cut(s) 46, 198
HgaI GACGC 1 cut(s) 294
HhaI GCGC 1 cut(s) 353
Hin1I GRCGYC 1 cut(s) 131
Hin1II CATG 2 cut(s) 876, 911
Hin6I GCGC 1 cut(s) 351
HinP1I GCGC 1 cut(s) 351
HincII GTYRAC 2 cut(s) 17, 284
HindII GTYRAC 2 cut(s) 17, 284
HinfI GANTC 5 cut(s) 84, 143, 170, 201, 595
HpaII CCGG 2 cut(s) 46, 198
Hpy166II GTNNAC 3 cut(s) 17, 43, 284
Hpy188I TCNGA 4 cut(s) 136, 175, 439, 918
Hpy188III TCNNGA 6 cut(s) 81, 114, 266, 380, 627, 846
Hpy8I GTNNAC 3 cut(s) 17, 43, 284
Hpy99I CGWCG 1 cut(s) 288
HpyAV CCTTC 2 cut(s) 171, 631
HpyCH4III ACNGT 1 cut(s) 229
HpyCH4IV ACGT 2 cut(s) 131, 678
HpyCH4V TGCA 6 cut(s) 256, 304, 577, 589, 705, 882
HpyF10VI GCNNNNNNNGC 3 cut(s) 96, 750, 873
HpyF3I CTNAG 3 cut(s) 326, 431, 844
HpySE526I ACGT 2 cut(s) 131, 678
Hsp92I GRCGYC 1 cut(s) 131
Hsp92II CATG 2 cut(s) 876, 911
HspAI GCGC 1 cut(s) 351
Kzo9I GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
LmnI GCTCC 6 cut(s) 77, 83, 163, 632, 691, 848
LweI GCATC 3 cut(s) 586, 626, 692
MaeI CTAG 2 cut(s) 396, 509
MaeII ACGT 2 cut(s) 131, 678
MalI GATC 8 cut(s) 110, 124, 177, 378, 606, 801, 920, 924
MbiI CCGCTC 1 cut(s) 851
MboI GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
MboII GAAGA 2 cut(s) 141, 386
MhlI GDGCHC 4 cut(s) 74, 141, 742, 869
MluCI AATT 6 cut(s) 61, 261, 294, 474, 669, 838
MlyI GAGTC 3 cut(s) 152, 164, 604
MmeI TCCRAC 1 cut(s) 697
MseI TTAA 4 cut(s) 345, 368, 447, 672
MslI CAYNNNNRTG 1 cut(s) 887
MspA1I CMGCKG 1 cut(s) 744
MspCI CTTAAG 1 cut(s) 446
MspI CCGG 2 cut(s) 46, 198
MspR9I CCNGG 1 cut(s) 764
MvaI CCWGG 1 cut(s) 764
MwoI GCNNNNNNNGC 3 cut(s) 96, 750, 873
NdeI CATATG 1 cut(s) 306
NdeII GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
NlaIII CATG 2 cut(s) 876, 911
NlaIV GGNNCC 3 cut(s) 219, 547, 760
NspI RCATGY 1 cut(s) 876
NspV TTCGAA 1 cut(s) 277
PfeI GAWTC 2 cut(s) 84, 201
PinAI ACCGGT 1 cut(s) 45
PleI GAGTC 3 cut(s) 151, 164, 603
PpsI GAGTC 3 cut(s) 151, 164, 603
Psp124BI GAGCTC 1 cut(s) 74
Psp6I CCWGG 1 cut(s) 762
PspGI CCWGG 1 cut(s) 762
PspN4I GGNNCC 3 cut(s) 219, 547, 760
PspPI GGNCC 1 cut(s) 218
RsaI GTAC 1 cut(s) 59
RsaNI GTAC 1 cut(s) 58
RseI CAYNNNNRTG 1 cut(s) 887
SacI GAGCTC 1 cut(s) 74
SalI GTCGAC 2 cut(s) 15, 282
SaqAI TTAA 4 cut(s) 345, 368, 447, 672
Sau3AI GATC 8 cut(s) 108, 122, 175, 376, 604, 799, 918, 922
Sau96I GGNCC 1 cut(s) 218
SchI GAGTC 3 cut(s) 152, 164, 604
ScrFI CCNGG 1 cut(s) 764
SduI GDGCHC 4 cut(s) 74, 141, 742, 869
SfaNI GCATC 3 cut(s) 586, 626, 692
SfuI TTCGAA 1 cut(s) 277
SmiMI CAYNNNNRTG 1 cut(s) 887
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 6 cut(s) 61, 261, 294, 474, 669, 838
SsiI CCGC 6 cut(s) 26, 195, 651, 742, 824, 851
SspI AATATT 2 cut(s) 274, 710
SspMI CTAG 2 cut(s) 396, 509
SstI GAGCTC 1 cut(s) 74
StyD4I CCNGG 1 cut(s) 762
TaaI ACNGT 1 cut(s) 229
TaiI ACGT 2 cut(s) 134, 681
TaqI TCGA 7 cut(s) 16, 107, 168, 277, 283, 792, 921
TasI AATT 6 cut(s) 61, 261, 294, 474, 669, 838
TfiI GAWTC 2 cut(s) 84, 201
Tru1I TTAA 4 cut(s) 345, 368, 447, 672
Tru9I TTAA 4 cut(s) 345, 368, 447, 672
TscAI CASTG 2 cut(s) 187, 819
TspDTI ATGAA 2 cut(s) 400, 402
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 2 cut(s) 187, 819
Vha464I CTTAAG 1 cut(s) 446
XapI RAATTY 2 cut(s) 261, 294
XceI RCATGY 1 cut(s) 876
XmiI GTMKAC 2 cut(s) 16, 283
XspI CTAG 2 cut(s) 396, 509
ZraI GACGTC 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.