Zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07500 |
| fragaria_vesca | FvH4_7g26870 |
| malus_domestica | MD07G1248000.v1.1 |
| prunus_persica | Prupe.2G272000_v2.0.a1 |
| pyrus_communis | pycom07g22170 |
| rosa_chinensis | RchiOBHm_Chr1g0373551 |
| rosa_laevigata | RLG00000026816 |
| rosa_multiflora | Rmu_sc0002860.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00284150 |
| rosa_rugosa | Rorug01G0378100 |
| rosa_samantha | Rh1AG387600 Rh1BG351900 Rh1CG364600 Rh1DG382300 |
| rosa_wichuraiana | Rw1G034780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 542 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 223 |
| AccI | GTMKAC | 1 cut(s) | 42 |
| AccII | CGCG | 4 cut(s) | 264, 308, 421, 457 |
| AccIII | TCCGGA | 1 cut(s) | 186 |
| AciI | CCGC | 9 cut(s) | 262, 264, 292, 308, 349, 415, 455, 500, 611 |
| AclWI | GGATC | 1 cut(s) | 109 |
| AcoI | YGGCCR | 3 cut(s) | 405, 497, 517 |
| AcsI | RAATTY | 3 cut(s) | 182, 296, 743 |
| AcyI | GRCGYC | 1 cut(s) | 851 |
| AdeI | CACNNNGTG | 1 cut(s) | 382 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 91, 171, 223, 237 |
| AflIII | ACRYGT | 2 cut(s) | 419, 507 |
| AgeI | ACCGGT | 1 cut(s) | 338 |
| AgsI | TTSAA | 2 cut(s) | 733, 769 |
| AjnI | CCWGG | 1 cut(s) | 90 |
| AluBI | AGCT | 4 cut(s) | 37, 493, 772, 892 |
| AluI | AGCT | 4 cut(s) | 37, 493, 772, 892 |
| Alw21I | GWGCWC | 1 cut(s) | 495 |
| Alw26I | GTCTC | 3 cut(s) | 71, 351, 440 |
| AlwI | GGATC | 1 cut(s) | 109 |
| Ama87I | CYCGRG | 2 cut(s) | 46, 437 |
| Aor13HI | TCCGGA | 1 cut(s) | 186 |
| AoxI | GGCC | 7 cut(s) | 94, 273, 405, 497, 517, 612, 630 |
| ApeKI | GCWGC | 4 cut(s) | 333, 815, 892, 895 |
| ApoI | RAATTY | 3 cut(s) | 182, 296, 743 |
| AsiGI | ACCGGT | 1 cut(s) | 338 |
| AspLEI | GCGC | 3 cut(s) | 282, 431, 459 |
| AspS9I | GGNCC | 4 cut(s) | 82, 94, 274, 613 |
| AsuC2I | CCSGG | 2 cut(s) | 21, 323 |
| AsuHPI | GGTGA | 3 cut(s) | 217, 251, 815 |
| AvaI | CYCGRG | 2 cut(s) | 46, 437 |
| AvaII | GGWCC | 1 cut(s) | 82 |
| AxyI | CCTNAGG | 1 cut(s) | 71 |
| BaeGI | GKGCMC | 1 cut(s) | 376 |
| BanII | GRGCYC | 2 cut(s) | 232, 495 |
| Bbv12I | GWGCWC | 1 cut(s) | 495 |
| BbvCI | CCTCAGC | 1 cut(s) | 678 |
| BbvI | GCAGC | 4 cut(s) | 345, 802, 879, 882 |
| BccI | CCATC | 3 cut(s) | 173, 408, 781 |
| BceAI | ACGGC | 2 cut(s) | 267, 690 |
| BciT130I | CCWGG | 1 cut(s) | 92 |
| BclI | TGATCA | 1 cut(s) | 541 |
| BcnI | CCSGG | 2 cut(s) | 21, 323 |
| BcoDI | GTCTC | 3 cut(s) | 71, 351, 440 |
| BfaI | CTAG | 1 cut(s) | 432 |
| BfmI | CTRYAG | 1 cut(s) | 896 |
| BfoI | RGCGCY | 1 cut(s) | 283 |
| BfuAI | ACCTGC | 1 cut(s) | 542 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 308 |
| BisI | GCNGC | 9 cut(s) | 265, 309, 334, 349, 500, 612, 816, 893, 896 |
| BlsI | GCNGC | 9 cut(s) | 266, 310, 335, 350, 501, 613, 817, 894, 897 |
| BmcAI | AGTACT | 1 cut(s) | 527 |
| Bme1390I | CCNGG | 3 cut(s) | 21, 92, 323 |
| Bme18I | GGWCC | 1 cut(s) | 82 |
| BmeT110I | CYCGRG | 2 cut(s) | 46, 437 |
| BmgT120I | GGNCC | 4 cut(s) | 82, 94, 274, 613 |
| BmiI | GGNNCC | 3 cut(s) | 229, 398, 615 |
| BmrFI | CCNGG | 3 cut(s) | 21, 92, 323 |
| BmsI | GCATC | 3 cut(s) | 25, 802, 855 |
| Bpu10I | CCTNAGC | 1 cut(s) | 678 |
| BpuMI | CCSGG | 2 cut(s) | 21, 323 |
| Bsa29I | ATCGAT | 1 cut(s) | 810 |
| BsaAI | YACGTR | 1 cut(s) | 510 |
| BsaHI | GRCGYC | 1 cut(s) | 851 |
| BsaI | GGTCTC | 2 cut(s) | 71, 351 |
| BsaJI | CCNNGG | 6 cut(s) | 91, 262, 376, 637, 668, 799 |
| BsaWI | WCCGGW | 3 cut(s) | 79, 186, 338 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 636, 666 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 91, 171, 223, 237 |
| Bse118I | RCCGGY | 1 cut(s) | 338 |
| Bse1I | ACTGG | 7 cut(s) | 85, 97, 124, 130, 136, 242, 884 |
| Bse21I | CCTNAGG | 1 cut(s) | 71 |
| BseAI | TCCGGA | 1 cut(s) | 186 |
| BseBI | CCWGG | 1 cut(s) | 92 |
| BseCI | ATCGAT | 1 cut(s) | 810 |
| BseDI | CCNNGG | 6 cut(s) | 91, 262, 376, 637, 668, 799 |
| BseGI | GGATG | 4 cut(s) | 16, 195, 400, 831 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 91, 171, 223, 237 |
| BseMII | CTCAG | 5 cut(s) | 85, 669, 749, 764, 884 |
| BseNI | ACTGG | 7 cut(s) | 85, 97, 124, 130, 136, 242, 884 |
| BseRI | GAGGAG | 4 cut(s) | 59, 657, 660, 695 |
| BseSI | GKGCMC | 1 cut(s) | 376 |
| BseX3I | CGGCCG | 1 cut(s) | 497 |
| BseXI | GCAGC | 4 cut(s) | 345, 802, 879, 882 |
| BseYI | CCCAGC | 1 cut(s) | 276 |
| Bsh1236I | CGCG | 4 cut(s) | 264, 308, 421, 457 |
| Bsh1285I | CGRYCG | 1 cut(s) | 500 |
| BshFI | GGCC | 7 cut(s) | 96, 275, 407, 499, 519, 614, 632 |
| BshTI | ACCGGT | 1 cut(s) | 338 |
| BshVI | ATCGAT | 1 cut(s) | 810 |
| BsiEI | CGRYCG | 1 cut(s) | 500 |
| BsiHKAI | GWGCWC | 1 cut(s) | 495 |
| BsiHKCI | CYCGRG | 2 cut(s) | 46, 437 |
| BsiSI | CCGG | 8 cut(s) | 20, 80, 187, 323, 339, 404, 496, 516 |
| BsiWI | CGTACG | 1 cut(s) | 252 |
| BslFI | GGGAC | 1 cut(s) | 124 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 91, 171, 223, 237 |
| BsmAI | GTCTC | 3 cut(s) | 71, 351, 440 |
| BsmFI | GGGAC | 1 cut(s) | 124 |
| BsnI | GGCC | 7 cut(s) | 96, 275, 407, 499, 519, 614, 632 |
| Bso31I | GGTCTC | 2 cut(s) | 71, 351 |
| BsoBI | CYCGRG | 2 cut(s) | 46, 437 |
| Bsp1286I | GDGCHC | 3 cut(s) | 232, 376, 495 |
| Bsp13I | TCCGGA | 1 cut(s) | 186 |
| Bsp143I | GATC | 4 cut(s) | 114, 153, 541, 711 |
| BspACI | CCGC | 9 cut(s) | 262, 264, 292, 308, 349, 415, 455, 500, 611 |
| BspANI | GGCC | 7 cut(s) | 96, 275, 407, 499, 519, 614, 632 |
| BspCNI | CTCAG | 5 cut(s) | 84, 670, 750, 765, 883 |
| BspDI | ATCGAT | 1 cut(s) | 810 |
| BspEI | TCCGGA | 1 cut(s) | 186 |
| BspFNI | CGCG | 4 cut(s) | 264, 308, 421, 457 |
| BspLI | GGNNCC | 3 cut(s) | 229, 398, 615 |
| BspMAI | CTGCAG | 1 cut(s) | 900 |
| BspMI | ACCTGC | 1 cut(s) | 542 |
| BspPI | GGATC | 1 cut(s) | 109 |
| BspTNI | GGTCTC | 2 cut(s) | 71, 351 |
| BsrFI | RCCGGY | 1 cut(s) | 338 |
| BsrI | ACTGG | 7 cut(s) | 85, 97, 124, 130, 136, 242, 884 |
| BssAI | RCCGGY | 1 cut(s) | 338 |
| BssECI | CCNNGG | 6 cut(s) | 91, 262, 376, 637, 668, 799 |
| BssMI | GATC | 4 cut(s) | 114, 153, 541, 711 |
| BssNI | GRCGYC | 1 cut(s) | 851 |
| BssT1I | CCWWGG | 1 cut(s) | 799 |
| Bst2UI | CCWGG | 1 cut(s) | 92 |
| Bst4CI | ACNGT | 5 cut(s) | 362, 608, 638, 669, 755 |
| Bst6I | CTCTTC | 1 cut(s) | 824 |
| BstACI | GRCGYC | 1 cut(s) | 851 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 13, 465 |
| BstBAI | YACGTR | 1 cut(s) | 510 |
| BstC8I | GCNNGC | 5 cut(s) | 419, 423, 427, 455, 549 |
| BstDEI | CTNAG | 5 cut(s) | 71, 678, 758, 773, 870 |
| BstDSI | CCRYGG | 4 cut(s) | 262, 376, 637, 668 |
| BstF5I | GGATG | 4 cut(s) | 16, 195, 400, 831 |
| BstFNI | CGCG | 4 cut(s) | 264, 308, 421, 457 |
| BstH2I | RGCGCY | 1 cut(s) | 283 |
| BstHHI | GCGC | 3 cut(s) | 282, 431, 459 |
| BstKTI | GATC | 4 cut(s) | 117, 156, 544, 714 |
| BstMAI | GTCTC | 3 cut(s) | 71, 351, 440 |
| BstMBI | GATC | 4 cut(s) | 114, 153, 541, 711 |
| BstMCI | CGRYCG | 1 cut(s) | 500 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 13, 308, 465, 490, 499, 662 |
| BstNI | CCWGG | 1 cut(s) | 92 |
| BstNSI | RCATGY | 1 cut(s) | 429 |
| BstSCI | CCNGG | 3 cut(s) | 19, 90, 321 |
| BstSFI | CTRYAG | 1 cut(s) | 896 |
| BstSLI | GKGCMC | 1 cut(s) | 376 |
| BstUI | CGCG | 4 cut(s) | 264, 308, 421, 457 |
| BstV1I | GCAGC | 4 cut(s) | 345, 802, 879, 882 |
| BstZI | CGGCCG | 1 cut(s) | 497 |
| Bsu15I | ATCGAT | 1 cut(s) | 810 |
| Bsu36I | CCTNAGG | 1 cut(s) | 71 |
| BsuRI | GGCC | 7 cut(s) | 96, 275, 407, 499, 519, 614, 632 |
| BsuTUI | ATCGAT | 1 cut(s) | 810 |
| BtgI | CCRYGG | 4 cut(s) | 262, 376, 637, 668 |
| BtsCI | GGATG | 4 cut(s) | 16, 195, 400, 831 |
| BtsIMutI | CAGTG | 1 cut(s) | 137 |
| BveI | ACCTGC | 1 cut(s) | 542 |
| Cac8I | GCNNGC | 5 cut(s) | 419, 423, 427, 455, 549 |
| CfoI | GCGC | 3 cut(s) | 282, 431, 459 |
| Cfr10I | RCCGGY | 1 cut(s) | 338 |
| Cfr13I | GGNCC | 4 cut(s) | 82, 94, 274, 613 |
| Cfr42I | CCGCGG | 1 cut(s) | 265 |
| ClaI | ATCGAT | 1 cut(s) | 810 |
| CseI | GACGC | 1 cut(s) | 840 |
| CspAI | ACCGGT | 1 cut(s) | 338 |
| CviAII | CATG | 2 cut(s) | 223, 426 |
| DdeI | CTNAG | 5 cut(s) | 71, 678, 758, 773, 870 |
| DpnI | GATC | 4 cut(s) | 116, 155, 543, 713 |
| DpnII | GATC | 4 cut(s) | 114, 153, 541, 711 |
| DraIII | CACNNNGTG | 1 cut(s) | 382 |
| EaeI | YGGCCR | 3 cut(s) | 405, 497, 517 |
| EagI | CGGCCG | 1 cut(s) | 497 |
| Eam1104I | CTCTTC | 1 cut(s) | 824 |
| EarI | CTCTTC | 1 cut(s) | 824 |
| Ecl136II | GAGCTC | 1 cut(s) | 493 |
| EclXI | CGGCCG | 1 cut(s) | 497 |
| Eco130I | CCWWGG | 1 cut(s) | 799 |
| Eco24I | GRGCYC | 2 cut(s) | 232, 495 |
| Eco31I | GGTCTC | 2 cut(s) | 71, 351 |
| Eco47I | GGWCC | 1 cut(s) | 82 |
| Eco52I | CGGCCG | 1 cut(s) | 497 |
| Eco53kI | GAGCTC | 1 cut(s) | 493 |
| Eco81I | CCTNAGG | 1 cut(s) | 71 |
| Eco88I | CYCGRG | 2 cut(s) | 46, 437 |
| EcoICRI | GAGCTC | 1 cut(s) | 493 |
| EcoRI | GAATTC | 2 cut(s) | 182, 743 |
| EcoRII | CCWGG | 1 cut(s) | 90 |
| EcoT14I | CCWWGG | 1 cut(s) | 799 |
| EcoT38I | GRGCYC | 2 cut(s) | 232, 495 |
| ErhI | CCWWGG | 1 cut(s) | 799 |
| FaeI | CATG | 2 cut(s) | 226, 429 |
| FaiI | YATR | 8 cut(s) | 224, 427, 480, 531, 540, 783, 795, 837 |
| FaqI | GGGAC | 1 cut(s) | 124 |
| FatI | CATG | 2 cut(s) | 222, 425 |
| FauI | CCCGC | 2 cut(s) | 299, 462 |
| FbaI | TGATCA | 1 cut(s) | 541 |
| FblI | GTMKAC | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 9 cut(s) | 265, 309, 334, 349, 500, 612, 816, 893, 896 |
| FokI | GGATG | 4 cut(s) | 3, 202, 387, 838 |
| FriOI | GRGCYC | 2 cut(s) | 232, 495 |
| Fsp4HI | GCNGC | 9 cut(s) | 265, 309, 334, 349, 500, 612, 816, 893, 896 |
| FspBI | CTAG | 1 cut(s) | 432 |
| GlaI | GCGC | 3 cut(s) | 281, 430, 458 |
| GluI | GCNGC | 9 cut(s) | 265, 309, 334, 349, 500, 612, 816, 893, 896 |
| GsaI | CCCAGC | 1 cut(s) | 280 |
| HaeII | RGCGCY | 1 cut(s) | 283 |
| HaeIII | GGCC | 7 cut(s) | 96, 275, 407, 499, 519, 614, 632 |
| HapII | CCGG | 8 cut(s) | 20, 80, 187, 323, 339, 404, 496, 516 |
| HgaI | GACGC | 1 cut(s) | 840 |
| HhaI | GCGC | 3 cut(s) | 282, 431, 459 |
| Hin1I | GRCGYC | 1 cut(s) | 851 |
| Hin1II | CATG | 2 cut(s) | 226, 429 |
| Hin6I | GCGC | 3 cut(s) | 280, 429, 457 |
| HinP1I | GCGC | 3 cut(s) | 280, 429, 457 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HinfI | GANTC | 3 cut(s) | 76, 107, 722 |
| HpaII | CCGG | 8 cut(s) | 20, 80, 187, 323, 339, 404, 496, 516 |
| HphI | GGTGA | 3 cut(s) | 217, 251, 815 |
| Hpy166II | GTNNAC | 4 cut(s) | 43, 55, 672, 718 |
| Hpy188I | TCNGA | 4 cut(s) | 178, 690, 759, 862 |
| Hpy188III | TCNNGA | 5 cut(s) | 73, 187, 437, 439, 748 |
| Hpy8I | GTNNAC | 4 cut(s) | 43, 55, 672, 718 |
| Hpy99I | CGWCG | 1 cut(s) | 856 |
| HpyAV | CCTTC | 3 cut(s) | 265, 622, 727 |
| HpyCH4III | ACNGT | 5 cut(s) | 362, 608, 638, 669, 755 |
| HpyCH4IV | ACGT | 1 cut(s) | 509 |
| HpyCH4V | TGCA | 4 cut(s) | 7, 16, 425, 898 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 13, 308, 465, 490, 499, 662 |
| HpyF3I | CTNAG | 5 cut(s) | 71, 678, 758, 773, 870 |
| HpySE526I | ACGT | 1 cut(s) | 509 |
| Hsp92I | GRCGYC | 1 cut(s) | 851 |
| Hsp92II | CATG | 2 cut(s) | 226, 429 |
| HspAI | GCGC | 3 cut(s) | 280, 429, 457 |
| Kpn2I | TCCGGA | 1 cut(s) | 186 |
| Ksp22I | TGATCA | 1 cut(s) | 541 |
| KspI | CCGCGG | 1 cut(s) | 265 |
| Kzo9I | GATC | 4 cut(s) | 114, 153, 541, 711 |
| LmnI | GCTCC | 3 cut(s) | 227, 402, 498 |
| Lsp1109I | GCAGC | 4 cut(s) | 345, 802, 879, 882 |
| LweI | GCATC | 3 cut(s) | 25, 802, 855 |
| MaeI | CTAG | 1 cut(s) | 432 |
| MaeII | ACGT | 1 cut(s) | 509 |
| MaeIII | GTNAC | 4 cut(s) | 23, 284, 341, 776 |
| MalI | GATC | 4 cut(s) | 116, 155, 543, 713 |
| MboI | GATC | 4 cut(s) | 114, 153, 541, 711 |
| MboII | GAAGA | 3 cut(s) | 463, 721, 841 |
| MhlI | GDGCHC | 3 cut(s) | 232, 376, 495 |
| MluCI | AATT | 3 cut(s) | 182, 296, 743 |
| MluI | ACGCGT | 1 cut(s) | 419 |
| MlyI | GAGTC | 3 cut(s) | 85, 101, 731 |
| MmeI | TCCRAC | 2 cut(s) | 156, 840 |
| MroI | TCCGGA | 1 cut(s) | 186 |
| MseI | TTAA | 1 cut(s) | 885 |
| MspA1I | CMGCKG | 2 cut(s) | 37, 264 |
| MspI | CCGG | 8 cut(s) | 20, 80, 187, 323, 339, 404, 496, 516 |
| MspR9I | CCNGG | 3 cut(s) | 21, 92, 323 |
| MvaI | CCWGG | 1 cut(s) | 92 |
| MvnI | CGCG | 4 cut(s) | 264, 308, 421, 457 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 13, 308, 465, 490, 499, 662 |
| NciI | CCSGG | 2 cut(s) | 21, 323 |
| NdeII | GATC | 4 cut(s) | 114, 153, 541, 711 |
| NlaIII | CATG | 2 cut(s) | 226, 429 |
| NlaIV | GGNNCC | 3 cut(s) | 229, 398, 615 |
| NmuCI | GTSAC | 2 cut(s) | 284, 776 |
| NspI | RCATGY | 1 cut(s) | 429 |
| PaeI | GCATGC | 1 cut(s) | 429 |
| PaeR7I | CTCGAG | 1 cut(s) | 437 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 48, 248, 384, 665 |
| Pfl23II | CGTACG | 1 cut(s) | 252 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 223 |
| PinAI | ACCGGT | 1 cut(s) | 338 |
| PkrI | GCNGC | 9 cut(s) | 266, 310, 335, 350, 501, 613, 817, 894, 897 |
| PleI | GAGTC | 3 cut(s) | 84, 101, 730 |
| PpsI | GAGTC | 3 cut(s) | 84, 101, 730 |
| Ppu21I | YACGTR | 1 cut(s) | 510 |
| Psp124BI | GAGCTC | 1 cut(s) | 495 |
| Psp6I | CCWGG | 1 cut(s) | 90 |
| PspFI | CCCAGC | 1 cut(s) | 276 |
| PspGI | CCWGG | 1 cut(s) | 90 |
| PspLI | CGTACG | 1 cut(s) | 252 |
| PspN4I | GGNNCC | 3 cut(s) | 229, 398, 615 |
| PspPI | GGNCC | 4 cut(s) | 82, 94, 274, 613 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 236, 268 |
| PstI | CTGCAG | 1 cut(s) | 900 |
| PvuII | CAGCTG | 1 cut(s) | 37 |
| SacI | GAGCTC | 1 cut(s) | 495 |
| SacII | CCGCGG | 1 cut(s) | 265 |
| SalI | GTCGAC | 1 cut(s) | 41 |
| SaqAI | TTAA | 1 cut(s) | 885 |
| SatI | GCNGC | 9 cut(s) | 265, 309, 334, 349, 500, 612, 816, 893, 896 |
| Sau3AI | GATC | 4 cut(s) | 114, 153, 541, 711 |
| Sau96I | GGNCC | 4 cut(s) | 82, 94, 274, 613 |
| ScaI | AGTACT | 1 cut(s) | 527 |
| SchI | GAGTC | 3 cut(s) | 85, 101, 731 |
| ScrFI | CCNGG | 3 cut(s) | 21, 92, 323 |
| SduI | GDGCHC | 3 cut(s) | 232, 376, 495 |
| SfaNI | GCATC | 3 cut(s) | 25, 802, 855 |
| SfcI | CTRYAG | 1 cut(s) | 896 |
| Sfr274I | CTCGAG | 1 cut(s) | 437 |
| Sfr303I | CCGCGG | 1 cut(s) | 265 |
| SgrBI | CCGCGG | 1 cut(s) | 265 |
| SinI | GGWCC | 1 cut(s) | 82 |
| SlaI | CTCGAG | 1 cut(s) | 437 |
| SmlI | CTYRAG | 1 cut(s) | 437 |
| SmoI | CTYRAG | 1 cut(s) | 437 |
| SphI | GCATGC | 1 cut(s) | 429 |
| Sse9I | AATT | 3 cut(s) | 182, 296, 743 |
| SsiI | CCGC | 9 cut(s) | 262, 264, 292, 308, 349, 415, 455, 500, 611 |
| SspMI | CTAG | 1 cut(s) | 432 |
| SstI | GAGCTC | 1 cut(s) | 495 |
| StyD4I | CCNGG | 3 cut(s) | 19, 90, 321 |
| StyI | CCWWGG | 1 cut(s) | 799 |
| TaaI | ACNGT | 5 cut(s) | 362, 608, 638, 669, 755 |
| TaiI | ACGT | 1 cut(s) | 512 |
| TaqI | TCGA | 6 cut(s) | 42, 110, 156, 387, 438, 810 |
| TasI | AATT | 3 cut(s) | 182, 296, 743 |
| TatI | WGTACW | 2 cut(s) | 54, 525 |
| TauI | GCSGC | 5 cut(s) | 267, 311, 351, 502, 614 |
| Tru1I | TTAA | 1 cut(s) | 885 |
| Tru9I | TTAA | 1 cut(s) | 885 |
| TscAI | CASTG | 1 cut(s) | 137 |
| TseFI | GTSAC | 2 cut(s) | 284, 776 |
| TseI | GCWGC | 4 cut(s) | 333, 815, 892, 895 |
| Tsp45I | GTSAC | 2 cut(s) | 284, 776 |
| TspDTI | ATGAA | 2 cut(s) | 713, 842 |
| TspGWI | ACGGA | 2 cut(s) | 393, 674 |
| TspRI | CASTG | 1 cut(s) | 137 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 223 |
| VpaK11BI | GGWCC | 1 cut(s) | 82 |
| XapI | RAATTY | 3 cut(s) | 182, 296, 743 |
| XceI | RCATGY | 1 cut(s) | 429 |
| XhoI | CTCGAG | 1 cut(s) | 437 |
| XmiI | GTMKAC | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 432 |
| ZrmI | AGTACT | 1 cut(s) | 527 |