pycom07g26150

Dipeptidyl peptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0004088
Physical Location & Seq
Forward (+)
26237214 .. 26238705
1492 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1035 bp
ATGCCAGTGACCGACCCTAATTTGACACAAAGTCTTGATGACTGTGTTCTTTTCCCACTTGAAGAGATTGTGCAATACCCGTTGCCGGGATACATTGCTCCCACTTCAATCAGTTTCAGTCCCGATGATACTATTATAACTTATTTGTTCAGTCCTGATCACACATTGAATCGAAAGGTATTTGCTTTCGATCTCAAAACTGGCAAGCAAGAGTTGTGTTTCAGTCCCCCTGATGGCGGACTTGACGAGAGTAATATATCACCAGAAGAAAAGTTGAGGAGAGAGAGGTTGAGGGAGCGCGGGTTGGGAGTGACACGGTATGAATGGGTGAAGACAAGCTCGAAAGGGAAAGCAATCATGGTGCCATTGCCAGCTGGGATTTATTTCCAGGATCTTTCTAGTTCAAATGCCGAGCTTAATCTTCCGAGGGCATCAGGTTCACCAATTATTGATCCACATCTGTCACCAGATGGTACAATGGTCGGTTATGTAAGAGATTGCGAGTTGCACGTTCTAAATTTGTTATACAATGAATCTATACAGTTAACGTATGGTGCCAGAGGAGATGTTTTGACGCATGGCCTTGCTGAATATATAGCTCAGGTGAGAAGAAGAAATGGATCGATCCAGCAGCTTAAGTACAAGAATGGTTACTGGTGGTCTCTAGACAGCAAATTCATTGCATTCACAGAAGTTGATTCTTCTGAGATTCCGCTTTTCAGAATCATGCATCAAGGTAAAAGCTCTGTTGGTTCAGAAGCTCAAGAAGATCATGCCTATCCCTTTGCGGGAGCTTCAAATGTCAAAGTTCGCCTAGGCGTGGTTTCTTCTGCTGGAGGCCCTATTACTTGGATGGATCTTCTGTGTGGGGGAACAGGTCAACCAGATAGTGAGGACGAATATCTGGCAAGAGTAAATTGGATGCATGGAAATACTTTAATAGCTCAGGTTATAAACAGATCACACAGCAGATTAAAGATGATCCAAACCTTAAATTCGATATTAAAACTGGGAAGCGAAAAGTTTTATTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04974 map04974
Pfam Domains
Protein Families
DPPIV_N Peptidase_S9

Protein Analysis

345

Amino Acids

38.42

Weight (kDa)

5.66

Isoelectric Point (pI)

46.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DPPIV_N PF00930 122 - 329 1.4e-35 Dipeptidyl peptidase IV (DPP IV) N-terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 137, 953
AccB1I GGYRCC 2 cut(s) 361, 554
AccII CGCG 1 cut(s) 300
AciI CCGC 4 cut(s) 237, 300, 713, 788
AclWI GGATC 6 cut(s) 399, 446, 619, 628, 864, 976
AcsI RAATTY 3 cut(s) 517, 674, 994
AfaI GTAC 2 cut(s) 475, 641
AfiI CCNNNNNNNGG 6 cut(s) 85, 86, 233, 236, 788, 820
AflII CTTAAG 1 cut(s) 635
AgsI TTSAA 5 cut(s) 62, 108, 169, 405, 798
AhdI GACNNNNNGTC 1 cut(s) 30
AjnI CCWGG 1 cut(s) 387
AluBI AGCT 9 cut(s) 339, 374, 415, 599, 634, 744, 761, 794, 944
AluI AGCT 9 cut(s) 339, 374, 415, 599, 634, 744, 761, 794, 944
Alw26I GTCTC 1 cut(s) 666
AlwI GGATC 6 cut(s) 399, 446, 619, 628, 864, 976
AoxI GGCC 2 cut(s) 580, 838
ApeKI GCWGC 1 cut(s) 631
ApoI RAATTY 3 cut(s) 517, 674, 994
AspA2I CCTAGG 1 cut(s) 814
AspLEI GCGC 1 cut(s) 300
AspS9I GGNCC 1 cut(s) 839
AsuC2I CCSGG 1 cut(s) 87
AsuHPI GGTGA 5 cut(s) 252, 340, 432, 456, 616
AvrII CCTAGG 1 cut(s) 814
BaeI ACNNNNGTAYC 2 cut(s) 465, 498
BanI GGYRCC 2 cut(s) 361, 554
BbsI GAAGAC 1 cut(s) 338
BbvI GCAGC 1 cut(s) 643
BccI CCATC 3 cut(s) 227, 464, 847
BciT130I CCWGG 1 cut(s) 389
BciVI GTATCC 1 cut(s) 83
BclI TGATCA 1 cut(s) 157
BcnI CCSGG 1 cut(s) 87
BcoDI GTCTC 1 cut(s) 666
BfaI CTAG 3 cut(s) 399, 665, 815
BfrI CTTAAG 1 cut(s) 635
BfuI GTATCC 1 cut(s) 83
BisI GCNGC 1 cut(s) 632
BlnI CCTAGG 1 cut(s) 814
BlsI GCNGC 1 cut(s) 633
Bme1390I CCNGG 2 cut(s) 87, 389
BmeRI GACNNNNNGTC 1 cut(s) 30
BmgT120I GGNCC 1 cut(s) 839
BmiI GGNNCC 2 cut(s) 363, 556
BmrFI CCNGG 2 cut(s) 87, 389
BmrI ACTGGG 1 cut(s) 1019
BmsI GCATC 3 cut(s) 440, 739, 912
BmuI ACTGGG 1 cut(s) 1019
BpiI GAAGAC 1 cut(s) 338
BpmI CTGGAG 1 cut(s) 855
Bpu10I CCTNAGC 2 cut(s) 600, 945
BpuEI CTTGAG 1 cut(s) 747
BpuMI CCSGG 1 cut(s) 87
Bsa29I ATCGAT 1 cut(s) 623
BsaBI GATNNNNATC 1 cut(s) 456
BsaI GGTCTC 1 cut(s) 666
BsaJI CCNNGG 2 cut(s) 425, 814
BsaXI ACNNNNNCTCC 2 cut(s) 287, 317
Bsc4I CCNNNNNNNGG 6 cut(s) 85, 86, 233, 236, 788, 820
Bse1I ACTGG 4 cut(s) 5, 205, 659, 1014
Bse3DI GCAATG 3 cut(s) 93, 365, 678
Bse8I GATNNNNATC 1 cut(s) 456
BseBI CCWGG 1 cut(s) 389
BseCI ATCGAT 1 cut(s) 623
BseDI CCNNGG 2 cut(s) 425, 814
BseGI GGATG 2 cut(s) 858, 927
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 6 cut(s) 85, 86, 233, 236, 788, 820
BseMI GCAATG 3 cut(s) 93, 365, 678
BseMII CTCAG 3 cut(s) 614, 696, 959
BseNI ACTGG 4 cut(s) 5, 205, 659, 1014
BseRI GAGGAG 2 cut(s) 292, 576
BseXI GCAGC 1 cut(s) 643
BseYI CCCAGC 1 cut(s) 374
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 2 cut(s) 582, 840
BshNI GGYRCC 2 cut(s) 361, 554
BshVI ATCGAT 1 cut(s) 623
BsiSI CCGG 1 cut(s) 86
BslFI GGGAC 2 cut(s) 105, 210
BslI CCNNNNNNNGG 6 cut(s) 85, 86, 233, 236, 788, 820
BsmAI GTCTC 1 cut(s) 666
BsmFI GGGAC 2 cut(s) 105, 210
BsmI GAATGC 1 cut(s) 683
BsnI GGCC 2 cut(s) 582, 840
Bso31I GGTCTC 1 cut(s) 666
BspACI CCGC 4 cut(s) 237, 300, 713, 788
BspANI GGCC 2 cut(s) 582, 840
BspCNI CTCAG 3 cut(s) 613, 697, 958
BspDI ATCGAT 1 cut(s) 623
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 2 cut(s) 363, 556
BspPI GGATC 6 cut(s) 399, 446, 619, 628, 864, 976
BspT107I GGYRCC 2 cut(s) 361, 554
BspTI CTTAAG 1 cut(s) 635
BspTNI GGTCTC 1 cut(s) 666
BsrDI GCAATG 3 cut(s) 93, 365, 678
BsrI ACTGG 4 cut(s) 5, 205, 659, 1014
BssECI CCNNGG 2 cut(s) 425, 814
BssT1I CCWWGG 1 cut(s) 814
Bst2UI CCWGG 1 cut(s) 389
Bst4CI ACNGT 3 cut(s) 44, 318, 543
Bst6I CTCTTC 1 cut(s) 57
BstAFI CTTAAG 1 cut(s) 635
BstC8I GCNNGC 2 cut(s) 206, 372
BstDEI CTNAG 3 cut(s) 600, 705, 945
BstF5I GGATG 2 cut(s) 858, 927
BstFNI CGCG 1 cut(s) 300
BstHHI GCGC 1 cut(s) 300
BstMAI GTCTC 1 cut(s) 666
BstNI CCWGG 1 cut(s) 389
BstSCI CCNGG 2 cut(s) 85, 387
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 1 cut(s) 643
BstV2I GAAGAC 1 cut(s) 338
BstX2I RGATCY 2 cut(s) 391, 856
BstYI RGATCY 2 cut(s) 391, 856
Bsu15I ATCGAT 1 cut(s) 623
BsuI GTATCC 1 cut(s) 83
BsuRI GGCC 2 cut(s) 582, 840
BsuTUI ATCGAT 1 cut(s) 623
BtsCI GGATG 2 cut(s) 858, 927
BtsIMutI CAGTG 1 cut(s) 12
Cac8I GCNNGC 2 cut(s) 206, 372
CfoI GCGC 1 cut(s) 300
Cfr13I GGNCC 1 cut(s) 839
ClaI ATCGAT 1 cut(s) 623
CseI GACGC 1 cut(s) 583
Csp6I GTAC 2 cut(s) 474, 640
CviAII CATG 5 cut(s) 358, 578, 727, 773, 926
CviQI GTAC 2 cut(s) 474, 640
DdeI CTNAG 3 cut(s) 600, 705, 945
DriI GACNNNNNGTC 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 57
Eam1105I GACNNNNNGTC 1 cut(s) 30
EarI CTCTTC 1 cut(s) 57
EciI GGCGGA 1 cut(s) 252
Eco130I CCWWGG 1 cut(s) 814
Eco31I GGTCTC 1 cut(s) 666
EcoO109I RGGNCCY 1 cut(s) 839
EcoRII CCWGG 1 cut(s) 387
EcoT14I CCWWGG 1 cut(s) 814
EcoT22I ATGCAT 2 cut(s) 732, 927
ErhI CCWWGG 1 cut(s) 814
FaeI CATG 5 cut(s) 361, 581, 730, 776, 929
FaqI GGGAC 2 cut(s) 105, 210
FatI CATG 5 cut(s) 357, 577, 726, 772, 925
FauI CCCGC 2 cut(s) 293, 781
FbaI TGATCA 1 cut(s) 157
Fnu4HI GCNGC 1 cut(s) 632
FokI GGATG 2 cut(s) 865, 934
Fsp4HI GCNGC 1 cut(s) 632
FspBI CTAG 3 cut(s) 399, 665, 815
GlaI GCGC 1 cut(s) 299
GluI GCNGC 1 cut(s) 632
GsaI CCCAGC 1 cut(s) 378
GsuI CTGGAG 1 cut(s) 855
HaeIII GGCC 2 cut(s) 582, 840
HapII CCGG 1 cut(s) 86
HgaI GACGC 1 cut(s) 583
HhaI GCGC 1 cut(s) 300
Hin1II CATG 5 cut(s) 361, 581, 730, 776, 929
Hin6I GCGC 1 cut(s) 298
HinP1I GCGC 1 cut(s) 298
HincII GTYRAC 2 cut(s) 546, 881
HindII GTYRAC 2 cut(s) 546, 881
HinfI GANTC 5 cut(s) 169, 533, 698, 709, 723
HpaI GTTAAC 1 cut(s) 546
HpaII CCGG 1 cut(s) 86
HphI GGTGA 5 cut(s) 252, 340, 432, 456, 616
Hpy166II GTNNAC 3 cut(s) 440, 546, 881
Hpy188I TCNGA 4 cut(s) 426, 706, 722, 757
Hpy188III TCNNGA 5 cut(s) 35, 122, 155, 665, 764
Hpy8I GTNNAC 3 cut(s) 440, 546, 881
HpyCH4III ACNGT 3 cut(s) 44, 318, 543
HpyCH4IV ACGT 2 cut(s) 510, 548
HpyCH4V TGCA 5 cut(s) 73, 508, 683, 730, 925
HpyF3I CTNAG 3 cut(s) 600, 705, 945
HpySE526I ACGT 2 cut(s) 510, 548
Hsp92II CATG 5 cut(s) 361, 581, 730, 776, 929
HspAI GCGC 1 cut(s) 298
Ksp22I TGATCA 1 cut(s) 157
KspAI GTTAAC 1 cut(s) 546
LmnI GCTCC 3 cut(s) 103, 295, 791
Lsp1109I GCAGC 1 cut(s) 643
LweI GCATC 3 cut(s) 440, 739, 912
MaeI CTAG 3 cut(s) 399, 665, 815
MaeII ACGT 2 cut(s) 510, 548
MaeIII GTNAC 4 cut(s) 7, 310, 462, 650
MflI RGATCY 2 cut(s) 391, 856
MluCI AATT 6 cut(s) 19, 444, 517, 674, 916, 994
MnlI CCTC 7 cut(s) 270, 279, 285, 420, 554, 830, 886
Mph1103I ATGCAT 2 cut(s) 732, 927
MseI TTAA 7 cut(s) 417, 545, 636, 938, 974, 992, 1004
MspA1I CMGCKG 1 cut(s) 374
MspCI CTTAAG 1 cut(s) 635
MspI CCGG 1 cut(s) 86
MspR9I CCNGG 2 cut(s) 87, 389
Mva1269I GAATGC 1 cut(s) 683
MvaI CCWGG 1 cut(s) 389
MvnI CGCG 1 cut(s) 300
NciI CCSGG 1 cut(s) 87
NlaIII CATG 5 cut(s) 361, 581, 730, 776, 929
NlaIV GGNNCC 2 cut(s) 363, 556
NmeAIII GCCGAG 1 cut(s) 436
NmuCI GTSAC 3 cut(s) 7, 310, 462
NsiI ATGCAT 2 cut(s) 732, 927
PctI GAATGC 1 cut(s) 683
PfeI GAWTC 5 cut(s) 169, 533, 698, 709, 723
PfoI TCCNGGA 1 cut(s) 387
PkrI GCNGC 1 cut(s) 633
PsiI TTATAA 2 cut(s) 137, 953
Psp6I CCWGG 1 cut(s) 387
PspFI CCCAGC 1 cut(s) 374
PspGI CCWGG 1 cut(s) 387
PspN4I GGNNCC 2 cut(s) 363, 556
PspPI GGNCC 1 cut(s) 839
PsuI RGATCY 2 cut(s) 391, 856
PvuII CAGCTG 1 cut(s) 374
RsaI GTAC 2 cut(s) 475, 641
RsaNI GTAC 2 cut(s) 474, 640
SaqAI TTAA 7 cut(s) 417, 545, 636, 938, 974, 992, 1004
SatI GCNGC 1 cut(s) 632
Sau96I GGNCC 1 cut(s) 839
ScrFI CCNGG 2 cut(s) 87, 389
SfaNI GCATC 3 cut(s) 440, 739, 912
SmlI CTYRAG 2 cut(s) 635, 762
SmoI CTYRAG 2 cut(s) 635, 762
Sse9I AATT 6 cut(s) 19, 444, 517, 674, 916, 994
SsiI CCGC 4 cut(s) 237, 300, 713, 788
SspMI CTAG 3 cut(s) 399, 665, 815
StyD4I CCNGG 2 cut(s) 85, 387
StyI CCWWGG 1 cut(s) 814
TaaI ACNGT 3 cut(s) 44, 318, 543
TaiI ACGT 2 cut(s) 513, 551
TaqI TCGA 5 cut(s) 172, 189, 341, 623, 998
TaqII GACCGA 1 cut(s) 26
TasI AATT 6 cut(s) 19, 444, 517, 674, 916, 994
TatI WGTACW 1 cut(s) 639
TfiI GAWTC 5 cut(s) 169, 533, 698, 709, 723
Tru1I TTAA 7 cut(s) 417, 545, 636, 938, 974, 992, 1004
Tru9I TTAA 7 cut(s) 417, 545, 636, 938, 974, 992, 1004
TscAI CASTG 1 cut(s) 12
TseFI GTSAC 3 cut(s) 7, 310, 462
TseI GCWGC 1 cut(s) 631
Tsp45I GTSAC 3 cut(s) 7, 310, 462
TspDTI ATGAA 3 cut(s) 336, 546, 667
TspRI CASTG 1 cut(s) 12
Vha464I CTTAAG 1 cut(s) 635
XapI RAATTY 3 cut(s) 517, 674, 994
XbaI TCTAGA 1 cut(s) 664
XmaJI CCTAGG 1 cut(s) 814
XspI CTAG 3 cut(s) 399, 665, 815
Zsp2I ATGCAT 2 cut(s) 732, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.