Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0013419

Physical Location & Seq

Genomic Coordinates Forward (+)

1185997 .. 1188496

Gene Structure 2500 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGCGTACCCCCGCCGCACCGTATATTTTTGGTCCCCCTCGGTCACTCTCCCATTTATCCGGAGTTTTAATGACGACGAGAGGGAGCAGATCGGAGAAGGTGAAACGGATTTTCTACCAGTTCGATGACAACCACGACGGCGGCCTCAACCGCGATGAGATGGCGGCGCTCGTCGTCGCCGTAAACCCTAGGGTCAAATTTTCCAACGAGCAGATCAATGCCATTTTGGACGAGGTTTTCCGGACCTACGGCGACTTCATCGACGGCGAGAAGGGGCTGACGTACGAGGGGCTTTTGCGGACGTACGATGACGGAGCCGGCGATGTGGACCGTGATTTCGACGCGCTCGGGTTGGAGCTTACGCTGGACGAGACGAAGGCGTCCGAGGCGTCGTCATCGTCGATTGTCGACGAGCGGGTGGTGGAGTCGCAGAAGAAGCAGAGGACGGCGGCGTGGGCGGTGTCGCCGAACCACGGGATCGTGTTCGACGACACGTGGAAGATTGTGGACGATTTGGAGATTCTGGTGAAGCGGTTGAAGGCGAAGCAGAGCAAAGACGGGAAATTGAAGGCGGACAACATCGACGCCTTCTCCGACGCCGGTTGGTCGAGGGAATTGGGGCCGTCGTCGGAGATTTCTGAGAAAAGGGTATTTTGGGAGGAGAATGGGCATGATTACGCTCTGTTCGTCAAAGAATTGGGGGTGCTGAGGAGCCGGGCTGACGGAGCGAGGTCACGTGAGCAGGCCTTCGACGGGCACATGGCGATTGGGAGGGTGCTGTACGAGCACCAGCTGTTTAAGGAGGCATTGGTGAGCTTCAAGAGGTCCTGTGAGTTGCAGCCGGTGGACGTGCGGCCGCATTTCCGAGCTGGGAATTGCTTGTATGTTCTTGGCAGGTATAAGGAAGCCAAAGAAGAGTTTTTGCTGGCGTTGGAGGCGGCGGAGGCCGGCGGCAACCAGTGGGCTTATCTGCTTCCACAGATTTATGTGAATCTCGGGATTGCGCTTGAAGGTGAAGGTATGGTTATGAGTGCTTGTGAGTATTACAGAGAAGCTGCAATTCTATGTCCAACACATTTTAGAGCTTTGAAACTTTTGGGTAGTGCTCTTTTCGGGGTTGGGGAATATGAGGCGGCTGTCAAGGCCTTGGATGAGGCCATTTTTATGAAACCCGATTATGCCGATGCGCATTGTGATTTGGCTTCGGCTTTGCATGCCATGGGGGAGGATGAGAGGGCAATTGCCACATTTCAGAAAGCTATTGATTTGAAGCCTGGTCATGTGGATGCTTTGTATAATTTGGGTGGGCTGTATATGGATTCGGGTAGGTTTCCGAGAGCTTCTGAGATGTATACTAGGGTTTTAGCTGTGTGGCCGAACCATTGGCGTGCGCAGCTTAACAAGGCCGTGTCTTTGTTGGGAGCTCGGGAAACTGAGGAGGCTAAGAAGGCTCTGAAGGAAGCATTGAAAATGACCAACAGGGTTGAATTGCATGATGCCATTGCACATTTGAAGCAGCTGCAGAAGAAGAAGGTGAAGGCAACCAATGGAGAGGGTTCTTTTGTCACTGTCGAACCCTCGAAATTCAAGACAGTTGGGGAGAAGACTACTTTGAGGCAAGAATTGGCCAATGCACTTGAGATTAGGGCCTTTCAGAGGATTACCAGGTTGAGTCGATGTGATGTGGAGCTTCTTAAGAAGGAAATGAATGATGGTGAAGTACCTCTTTCGTATTCAGGTACTGGTGTTCCTCAGAGATCCATACGCAAGCCTAATTTAGAAGTAATCCTCCGCAGGTTGCTTGATTTTCTAAAGCCAGAGACTTTCCAAGGAGCTGTTAAAGCCATAAACGAGAGGATACTCTCTGTCATGGATGAAACAGGCTCAGGAAGAGTGGATTTGGGAATGTTTTTTGCTGTTTTAGCCCCTATTTGCAGTGGCTCGCCAGAAAAGCGCAAACGAGTTGCATTTGATGCGCTCTTGTGGCGTCCTGTAAACGAGGGTGGTGGTTCCCAGATAAGAAAAGCTGATGCCACTAGCTATATCAATCTGTTGAGAGCCATGTATGTCCCTTCCCACGGGGTTAGCGAGATGCTGGAACTCCATGGAGAAATGGATCTTTCCACAGTGTCTTTCACAGAGTTTCTTGTCATGTTTGACGACCCAGATTGGGGTTTTGGTATCATGTCCACGCTGTTGAAGCTTGAAACCGGGGACAGAAACCGCCATGGTAACCATGTCTGCTCGGTCTGCCGCTACCCGATCATCGGGTCCCGATTTAAGGAGGTAAAATCTCATTTCAGCTTGTGTAATCAATGCTATAGCGAGGGAAAGGTGCCTCCTACCTCGAAGCAGGAAGAGTACAAATTCAGAGAATACGGAAGCGAGGCTGAAGCCATGAAACACAAATGCAAGTGCTTTACATTGCAATCCCACAAGGCCCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 TPR_1 TPR_11 TPR_16 TPR_2 TPR_8

Protein Analysis

816

Amino Acids

91.31

Weight (kDa)

6.44

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	366 - 426	1.9e-09	Tetratricopeptide repeat
TPR_11	PF13414	367 - 408	1.3e-07	TPR repeat
TPR_11	PF13414	403 - 442	5.4e-07	TPR repeat
TPR_19	PF14559	412 - 455	1.9e-06	Tetratricopeptide repeat
TPR_16	PF13432	432 - 490	1.9e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05150 AT2G32450
fragaria_vesca	FvH4_2g39050
malus_domestica	MD08G1018000.v1.1 MD15G1017300.v1.1
prunus_persica	Prupe.1G370600_v2.0.a1
pyrus_communis	pycom08g01560 pycom15g01520
rosa_chinensis	RchiOBHm_Chr6g0302151
rosa_laevigata	RLG00000011191
rosa_multiflora	Rmu_ssc0000160.1_g000016
rosa_roxburghii	Rroxscaffold_7G00166040
rosa_rugosa	Rorug06G0312600
rosa_samantha	Rh6AG425100 Rh6BG477300 Rh6CG438000 Rh6DG425000
rosa_wichuraiana	Rw6G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	379
Acc16I	TGCGCA	2 cut(s)	1188, 1392
Acc36I	ACCTGC	2 cut(s)	885, 1785
AccB1I	GGYRCC	1 cut(s)	2335
AccBSI	CCGCTC	1 cut(s)	415
AccI	GTMKAC	2 cut(s)	408, 1352
AccII	CGCG	2 cut(s)	153, 344
AccIII	TCCGGA	2 cut(s)	59, 240
AclWI	GGATC	3 cut(s)	485, 1752, 2124
AcoI	YGGCCR	3 cut(s)	854, 1373, 1626
AcsI	RAATTY	3 cut(s)	197, 1583, 2366
AcuI	CTGAAG	2 cut(s)	1475, 2412
AcvI	CACGTG	2 cut(s)	495, 737
AcyI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
AfaI	GTAC	7 cut(s)	7, 284, 305, 782, 1722, 1741, 2363
AfiI	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
AflII	CTTAAG	1 cut(s)	1694
AflIII	ACRYGT	1 cut(s)	492
AjiI	CACGTC	1 cut(s)	850
AjnI	CCWGG	2 cut(s)	1273, 1664
Alw21I	GWGCWC	3 cut(s)	789, 1108, 1426
Alw26I	GTCTC	2 cut(s)	365, 1814
AlwI	GGATC	3 cut(s)	485, 1752, 2124
AlwNI	CAGNNNCTG	1 cut(s)	1742
Ama87I	CYCGRG	3 cut(s)	347, 995, 1425
Aor13HI	TCCGGA	2 cut(s)	59, 240
ApeKI	GCWGC	5 cut(s)	838, 1055, 1393, 1516, 1519
ApoI	RAATTY	3 cut(s)	197, 1583, 2366
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
AspA2I	CCTAGG	1 cut(s)	188
AspLEI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
AspS9I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
AsuC2I	CCSGG	2 cut(s)	716, 2212
AsuHPI	GGTGA	6 cut(s)	112, 538, 823, 1025, 1546, 1727
AvaI	CYCGRG	3 cut(s)	347, 995, 1425
AvaII	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
AvrII	CCTAGG	1 cut(s)	188
BaeGI	GKGCMC	1 cut(s)	759
BaeI	ACNNNNGTAYC	2 cut(s)	1731, 1764
BalI	TGGCCA	1 cut(s)	1628
BanI	GGYRCC	1 cut(s)	2335
BanII	GRGCYC	1 cut(s)	1426
BbrPI	CACGTG	2 cut(s)	495, 737
BbsI	GAAGAC	1 cut(s)	1610
Bbv12I	GWGCWC	3 cut(s)	789, 1108, 1426
BbvCI	CCTCAGC	1 cut(s)	707
BbvI	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
BccI	CCATC	2 cut(s)	154, 1706
BceAI	ACGGC	7 cut(s)	154, 164, 265, 280, 462, 607, 1391
BciT130I	CCWGG	2 cut(s)	1275, 1666
BciVI	GTATCC	1 cut(s)	1851
BcnI	CCSGG	2 cut(s)	716, 2212
BcoDI	GTCTC	2 cut(s)	365, 1814
BfaI	CTAG	3 cut(s)	189, 1356, 2037
BfmI	CTRYAG	2 cut(s)	1520, 2320
BfoI	RGCGCY	1 cut(s)	170
BfrI	CTTAAG	1 cut(s)	1694
BfuAI	ACCTGC	2 cut(s)	885, 1785
BfuI	GTATCC	1 cut(s)	1851
BlnI	CCTAGG	1 cut(s)	188
Bme1390I	CCNGG	4 cut(s)	716, 1275, 1666, 2212
Bme18I	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
BmeT110I	CYCGRG	3 cut(s)	347, 995, 1425
BmgBI	CACGTC	1 cut(s)	850
BmgT120I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
BmiI	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
BmrFI	CCNGG	4 cut(s)	716, 1275, 1666, 2212
BmsI	GCATC	6 cut(s)	1174, 1276, 1486, 1963, 2020, 2082
BpiI	GAAGAC	1 cut(s)	1610
Bpu10I	CCTNAGC	2 cut(s)	707, 1885
BpuEI	CTTGAG	1 cut(s)	1658
BpuMI	CCSGG	2 cut(s)	716, 2212
BsaAI	YACGTR	2 cut(s)	495, 737
BsaHI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
BsaWI	WCCGGW	2 cut(s)	59, 240
BsaXI	ACNNNNNCTCC	2 cut(s)	575, 605
Bsc4I	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
Bse118I	RCCGGY	4 cut(s)	317, 599, 841, 947
Bse1I	ACTGG	3 cut(s)	118, 958, 1747
Bse3DI	GCAATG	2 cut(s)	1500, 2423
BseAI	TCCGGA	2 cut(s)	59, 240
BseBI	CCWGG	2 cut(s)	1275, 1666
BseGI	GGATG	4 cut(s)	1156, 1234, 1291, 1879
BseLI	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
BseMI	GCAATG	2 cut(s)	1500, 2423
BseMII	CTCAG	6 cut(s)	630, 698, 1335, 1425, 1766, 1899
BseNI	ACTGG	3 cut(s)	118, 958, 1747
BseRI	GAGGAG	3 cut(s)	674, 724, 1451
BseSI	GKGCMC	1 cut(s)	759
BseX3I	CGGCCG	1 cut(s)	854
BseXI	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
BseYI	CCCAGC	1 cut(s)	869
Bsh1236I	CGCG	2 cut(s)	153, 344
Bsh1285I	CGRYCG	1 cut(s)	857
BshNI	GGYRCC	1 cut(s)	2335
BsiEI	CGRYCG	1 cut(s)	857
BsiHKAI	GWGCWC	3 cut(s)	789, 1108, 1426
BsiHKCI	CYCGRG	3 cut(s)	347, 995, 1425
BsiSI	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
BsiWI	CGTACG	2 cut(s)	282, 303
BslFI	GGGAC	4 cut(s)	18, 2054, 2228, 2257
BslI	CCNNNNNNNGG	8 cut(s)	473, 753, 1656, 2078, 2170, 2171, 2267, 2281
BsmAI	GTCTC	2 cut(s)	365, 1814
BsmBI	CGTCTC	1 cut(s)	365
BsmFI	GGGAC	4 cut(s)	18, 2054, 2228, 2257
BsoBI	CYCGRG	3 cut(s)	347, 995, 1425
Bsp1286I	GDGCHC	4 cut(s)	759, 789, 1108, 1426
Bsp13I	TCCGGA	2 cut(s)	59, 240
Bsp143I	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
Bsp19I	CCATGG	3 cut(s)	1218, 2104, 2227
BspCNI	CTCAG	6 cut(s)	631, 699, 1336, 1426, 1765, 1898
BspEI	TCCGGA	2 cut(s)	59, 240
BspFNI	CGCG	2 cut(s)	153, 344
BspLI	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
BspMAI	CTGCAG	1 cut(s)	1524
BspMI	ACCTGC	2 cut(s)	885, 1785
BspPI	GGATC	3 cut(s)	485, 1752, 2124
BspT107I	GGYRCC	1 cut(s)	2335
BspTI	CTTAAG	1 cut(s)	1694
BsrBI	CCGCTC	1 cut(s)	415
BsrDI	GCAATG	2 cut(s)	1500, 2423
BsrFI	RCCGGY	4 cut(s)	317, 599, 841, 947
BsrI	ACTGG	3 cut(s)	118, 958, 1747
BssAI	RCCGGY	4 cut(s)	317, 599, 841, 947
BssMI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
BssNAI	GTATAC	1 cut(s)	1353
BssNI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
BssT1I	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
Bst1107I	GTATAC	1 cut(s)	1353
Bst2UI	CCWGG	2 cut(s)	1275, 1666
Bst4CI	ACNGT	5 cut(s)	21, 332, 1570, 1594, 2128
Bst6I	CTCTTC	3 cut(s)	909, 1885, 2352
BstACI	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
BstAFI	CTTAAG	1 cut(s)	1694
BstAPI	GCANNNNNTGC	1 cut(s)	1973
BstBAI	YACGTR	2 cut(s)	495, 737
BstC8I	GCNNGC	8 cut(s)	319, 744, 927, 949, 1215, 1389, 1769, 1943
BstDEI	CTNAG	7 cut(s)	639, 707, 1344, 1434, 1443, 1752, 1885
BstDSI	CCRYGG	5 cut(s)	472, 1218, 2077, 2104, 2227
BstEII	GGTNACC	1 cut(s)	2231
BstENI	CCTNNNNNAGG	1 cut(s)	1654
BstF5I	GGATG	4 cut(s)	1156, 1234, 1291, 1879
BstFNI	CGCG	2 cut(s)	153, 344
BstH2I	RGCGCY	1 cut(s)	170
BstHHI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
BstKTI	GATC	6 cut(s)	92, 216, 480, 1760, 2119, 2265
BstMAI	GTCTC	2 cut(s)	365, 1814
BstMBI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
BstMCI	CGRYCG	1 cut(s)	857
BstNI	CCWGG	2 cut(s)	1275, 1666
BstNSI	RCATGY	1 cut(s)	1217
BstPI	GGTNACC	1 cut(s)	2231
BstSCI	CCNGG	4 cut(s)	714, 1273, 1664, 2210
BstSFI	CTRYAG	2 cut(s)	1520, 2320
BstSLI	GKGCMC	1 cut(s)	759
BstUI	CGCG	2 cut(s)	153, 344
BstV1I	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
BstV2I	GAAGAC	1 cut(s)	1610
BstX2I	RGATCY	2 cut(s)	1757, 2116
BstYI	RGATCY	2 cut(s)	1757, 2116
BstZ17I	GTATAC	1 cut(s)	1353
BstZI	CGGCCG	1 cut(s)	854
BsuI	GTATCC	1 cut(s)	1851
BtgI	CCRYGG	5 cut(s)	472, 1218, 2077, 2104, 2227
BtgZI	GCGATG	2 cut(s)	168, 336
BtrI	CACGTC	1 cut(s)	850
BtsCI	GGATG	4 cut(s)	1156, 1234, 1291, 1879
BtsI	GCAGTG	1 cut(s)	1942
BtsIMutI	CAGTG	4 cut(s)	965, 1566, 1942, 2133
BveI	ACCTGC	2 cut(s)	885, 1785
Cac8I	GCNNGC	8 cut(s)	319, 744, 927, 949, 1215, 1389, 1769, 1943
CaiI	CAGNNNCTG	1 cut(s)	1742
CciNI	GCGGCCGC	1 cut(s)	854
CfoI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
Cfr10I	RCCGGY	4 cut(s)	317, 599, 841, 947
Cfr13I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
CseI	GACGC	6 cut(s)	350, 369, 378, 593, 605, 1976
CsiI	ACCWGGT	1 cut(s)	1664
Csp6I	GTAC	7 cut(s)	6, 283, 304, 781, 1721, 1740, 2362
CviQI	GTAC	7 cut(s)	6, 283, 304, 781, 1721, 1740, 2362
DdeI	CTNAG	7 cut(s)	639, 707, 1344, 1434, 1443, 1752, 1885
DpnI	GATC	6 cut(s)	91, 215, 479, 1759, 2118, 2264
DpnII	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
DrdI	GACNNNNNNGTC	1 cut(s)	379
DseDI	GACNNNNNNGTC	1 cut(s)	379
EaeI	YGGCCR	3 cut(s)	854, 1373, 1626
EagI	CGGCCG	1 cut(s)	854
Eam1104I	CTCTTC	3 cut(s)	909, 1885, 2352
EarI	CTCTTC	3 cut(s)	909, 1885, 2352
EciI	GGCGGA	2 cut(s)	587, 956
Ecl136II	GAGCTC	1 cut(s)	1424
EclXI	CGGCCG	1 cut(s)	854
Eco130I	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
Eco147I	AGGCCT	2 cut(s)	746, 1145
Eco24I	GRGCYC	1 cut(s)	1426
Eco47I	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
Eco52I	CGGCCG	1 cut(s)	854
Eco53kI	GAGCTC	1 cut(s)	1424
Eco57I	CTGAAG	2 cut(s)	1475, 2412
Eco72I	CACGTG	2 cut(s)	495, 737
Eco88I	CYCGRG	3 cut(s)	347, 995, 1425
Eco91I	GGTNACC	1 cut(s)	2231
EcoICRI	GAGCTC	1 cut(s)	1424
EcoNI	CCTNNNNNAGG	1 cut(s)	1654
EcoO109I	RGGNCCY	4 cut(s)	825, 1647, 2271, 2440
EcoO65I	GGTNACC	1 cut(s)	2231
EcoRII	CCWGG	2 cut(s)	1273, 1664
EcoT14I	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
EcoT38I	GRGCYC	1 cut(s)	1426
ErhI	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
Esp3I	CGTCTC	1 cut(s)	365
FalI	AAGNNNNNCTT	2 cut(s)	1710, 1742
FaqI	GGGAC	4 cut(s)	18, 2054, 2228, 2257
FauI	CCCGC	2 cut(s)	19, 408
FblI	GTMKAC	2 cut(s)	408, 1352
FokI	GGATG	4 cut(s)	1163, 1241, 1298, 1886
FriOI	GRGCYC	1 cut(s)	1426
FspAI	RTGCGCAY	1 cut(s)	1188
FspBI	CTAG	3 cut(s)	189, 1356, 2037
FspI	TGCGCA	2 cut(s)	1188, 1392
GlaI	GCGC	7 cut(s)	168, 345, 1005, 1188, 1392, 1955, 1977
GsaI	CCCAGC	1 cut(s)	873
HaeII	RGCGCY	1 cut(s)	170
HapII	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
HgaI	GACGC	6 cut(s)	350, 369, 378, 593, 605, 1976
HhaI	GCGC	7 cut(s)	169, 346, 1006, 1189, 1393, 1956, 1978
Hin1I	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
Hin6I	GCGC	7 cut(s)	167, 344, 1004, 1187, 1391, 1954, 1976
HinP1I	GCGC	7 cut(s)	167, 344, 1004, 1187, 1391, 1954, 1976
HincII	GTYRAC	1 cut(s)	409
HindII	GTYRAC	1 cut(s)	409
HindIII	AAGCTT	1 cut(s)	2201
HinfI	GANTC	5 cut(s)	425, 520, 991, 1319, 1672
HpaII	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
HphI	GGTGA	6 cut(s)	112, 538, 823, 1025, 1546, 1727
Hpy166II	GTNNAC	8 cut(s)	184, 328, 409, 508, 847, 1353, 1996, 2190
Hpy188III	TCNNGA	8 cut(s)	60, 241, 820, 997, 1427, 1588, 1887, 2274
Hpy8I	GTNNAC	8 cut(s)	184, 328, 409, 508, 847, 1353, 1996, 2190
HpyCH4III	ACNGT	5 cut(s)	21, 332, 1570, 1594, 2128
HpyCH4IV	ACGT	5 cut(s)	281, 302, 494, 736, 849
HpyF3I	CTNAG	7 cut(s)	639, 707, 1344, 1434, 1443, 1752, 1885
HpySE526I	ACGT	5 cut(s)	281, 302, 494, 736, 849
Hsp92I	GRCGYC	5 cut(s)	380, 389, 585, 597, 1987
HspAI	GCGC	7 cut(s)	167, 344, 1004, 1187, 1391, 1954, 1976
KflI	GGGWCCC	1 cut(s)	2271
Kpn2I	TCCGGA	2 cut(s)	59, 240
KroI	GCCGGC	2 cut(s)	317, 947
KroNI	GCCGGC	2 cut(s)	319, 949
Kzo9I	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
LmnI	GCTCC	8 cut(s)	84, 314, 355, 711, 725, 1421, 1687, 1832
Lsp1109I	GCAGC	5 cut(s)	850, 1042, 1405, 1506, 1528
LweI	GCATC	6 cut(s)	1174, 1276, 1486, 1963, 2020, 2082
MabI	ACCWGGT	1 cut(s)	1664
MaeI	CTAG	3 cut(s)	189, 1356, 2037
MaeII	ACGT	5 cut(s)	281, 302, 494, 736, 849
MaeIII	GTNAC	4 cut(s)	42, 732, 1564, 2231
MalI	GATC	6 cut(s)	91, 215, 479, 1759, 2118, 2264
MbiI	CCGCTC	1 cut(s)	415
MboI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
MboII	GAAGA	8 cut(s)	445, 511, 926, 1537, 1540, 1615, 1902, 2369
MfeI	CAATTG	1 cut(s)	1239
MflI	RGATCY	2 cut(s)	1757, 2116
MhlI	GDGCHC	4 cut(s)	759, 789, 1108, 1426
MlsI	TGGCCA	1 cut(s)	1628
MluNI	TGGCCA	1 cut(s)	1628
MlyI	GAGTC	2 cut(s)	434, 1681
MmeI	TCCRAC	6 cut(s)	228, 333, 609, 618, 912, 1094
Mox20I	TGGCCA	1 cut(s)	1628
MroI	TCCGGA	2 cut(s)	59, 240
MroNI	GCCGGC	2 cut(s)	317, 947
MscI	TGGCCA	1 cut(s)	1628
MseI	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
MslI	CAYNNNNRTG	3 cut(s)	1163, 1284, 1386
Msp20I	TGGCCA	1 cut(s)	1628
MspA1I	CMGCKG	2 cut(s)	793, 1519
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	8 cut(s)	60, 241, 318, 600, 715, 842, 948, 2211
MspR9I	CCNGG	4 cut(s)	716, 1275, 1666, 2212
MunI	CAATTG	1 cut(s)	1239
MvaI	CCWGG	2 cut(s)	1275, 1666
MvnI	CGCG	2 cut(s)	153, 344
NaeI	GCCGGC	2 cut(s)	319, 949
NciI	CCSGG	2 cut(s)	716, 2212
NcoI	CCATGG	3 cut(s)	1218, 2104, 2227
NdeII	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
NgoMIV	GCCGGC	2 cut(s)	317, 947
NlaIV	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
NmuCI	GTSAC	3 cut(s)	42, 732, 1564
NotI	GCGGCCGC	1 cut(s)	854
NsbI	TGCGCA	2 cut(s)	1188, 1392
NspI	RCATGY	1 cut(s)	1217
PaeI	GCATGC	1 cut(s)	1217
PceI	AGGCCT	2 cut(s)	746, 1145
PcsI	WCGNNNNNNNCGW	7 cut(s)	177, 318, 398, 486, 591, 684, 2085
PdiI	GCCGGC	2 cut(s)	319, 949
PfeI	GAWTC	3 cut(s)	520, 991, 1319
Pfl23II	CGTACG	2 cut(s)	282, 303
PleI	GAGTC	2 cut(s)	433, 1680
PmaCI	CACGTG	2 cut(s)	495, 737
PmlI	CACGTG	2 cut(s)	495, 737
PpsI	GAGTC	2 cut(s)	433, 1680
Ppu21I	YACGTR	2 cut(s)	495, 737
PpuMI	RGGWCCY	2 cut(s)	825, 2271
Psp124BI	GAGCTC	1 cut(s)	1426
Psp5II	RGGWCCY	2 cut(s)	825, 2271
Psp6I	CCWGG	2 cut(s)	1273, 1664
PspCI	CACGTG	2 cut(s)	495, 737
PspEI	GGTNACC	1 cut(s)	2231
PspFI	CCCAGC	1 cut(s)	869
PspGI	CCWGG	2 cut(s)	1273, 1664
PspLI	CGTACG	2 cut(s)	282, 303
PspN4I	GGNNCC	9 cut(s)	34, 316, 621, 713, 2011, 2272, 2273, 2337, 2442
PspPI	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
PspPPI	RGGWCCY	2 cut(s)	825, 2271
PstI	CTGCAG	1 cut(s)	1524
PstNI	CAGNNNCTG	1 cut(s)	1742
PsuI	RGATCY	2 cut(s)	1757, 2116
PvuII	CAGCTG	2 cut(s)	793, 1519
RsaI	GTAC	7 cut(s)	7, 284, 305, 782, 1722, 1741, 2363
RsaNI	GTAC	7 cut(s)	6, 283, 304, 781, 1721, 1740, 2362
RseI	CAYNNNNRTG	3 cut(s)	1163, 1284, 1386
SacI	GAGCTC	1 cut(s)	1426
SalI	GTCGAC	1 cut(s)	407
SaqAI	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
Sau3AI	GATC	6 cut(s)	89, 213, 477, 1757, 2116, 2262
Sau96I	GGNCC	8 cut(s)	32, 243, 328, 620, 825, 1647, 2271, 2440
SchI	GAGTC	2 cut(s)	434, 1681
ScrFI	CCNGG	4 cut(s)	716, 1275, 1666, 2212
SduI	GDGCHC	4 cut(s)	759, 789, 1108, 1426
SexAI	ACCWGGT	1 cut(s)	1664
SfaNI	GCATC	6 cut(s)	1174, 1276, 1486, 1963, 2020, 2082
SfcI	CTRYAG	2 cut(s)	1520, 2320
SinI	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
SmiMI	CAYNNNNRTG	3 cut(s)	1163, 1284, 1386
SmlI	CTYRAG	2 cut(s)	1637, 1694
SmoI	CTYRAG	2 cut(s)	1637, 1694
SphI	GCATGC	1 cut(s)	1217
SseBI	AGGCCT	2 cut(s)	746, 1145
SspMI	CTAG	3 cut(s)	189, 1356, 2037
SstI	GAGCTC	1 cut(s)	1426
StuI	AGGCCT	2 cut(s)	746, 1145
StyD4I	CCNGG	4 cut(s)	714, 1273, 1664, 2210
StyI	CCWWGG	6 cut(s)	188, 1146, 1218, 1828, 2104, 2227
TaaI	ACNGT	5 cut(s)	21, 332, 1570, 1594, 2128
TaiI	ACGT	5 cut(s)	284, 305, 497, 739, 852
TaqII	GACCGA	2 cut(s)	30, 2236
TatI	WGTACW	1 cut(s)	2361
TfiI	GAWTC	3 cut(s)	520, 991, 1319
Tru1I	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
Tru9I	TTAA	6 cut(s)	68, 798, 1398, 1695, 1839, 2280
TscAI	CASTG	4 cut(s)	965, 1573, 1942, 2133
TseFI	GTSAC	3 cut(s)	42, 732, 1564
TseI	GCWGC	5 cut(s)	838, 1055, 1393, 1516, 1519
Tsp45I	GTSAC	3 cut(s)	42, 732, 1564
TspDTI	ATGAA	5 cut(s)	247, 1181, 1721, 1890, 2414
TspGWI	ACGGA	4 cut(s)	121, 327, 738, 2394
TspRI	CASTG	4 cut(s)	965, 1573, 1942, 2133
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	5 cut(s)	32, 243, 328, 825, 2271
XagI	CCTNNNNNAGG	1 cut(s)	1654
XapI	RAATTY	3 cut(s)	197, 1583, 2366
XceI	RCATGY	1 cut(s)	1217
XmaJI	CCTAGG	1 cut(s)	188
XmiI	GTMKAC	2 cut(s)	408, 1352
XspI	CTAG	3 cut(s)	189, 1356, 2037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.