pycom08g04670

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
3530664 .. 3534639
3976 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04670.9

Sequence Viewer

Length: 1251 bp
ATGCATAGAGCAAAAGCCATTGAAGCTCTGAGGAGGTGTGCGGCTCAGAGAGGAAGAAGCAGCTCTCTCTCTCATCGCAGAGCCTTTTCTGCCCAACCAAGCTATGCCCAATACGACGACGTCCAGGACCTGGTTACGGTGGAGGGAAGAGCCAAATCGAGAGCGGCAATTCTCAACAGGCCATCTGCACTCAATGCTCTCAACAGTTCCATGGCAGCTCGACTGAAGAGACTGTATGAATCATGGGAGGATAACCCGGACATTGGATTTGTCTTGATGAAGGGTAGTGGGAGGGCTTTCTGCGCCGGAGCAGATGCTGTTAGCCTTTATCAACTAGTGAATGAAGGGAATCTTGATGAATGTAAAAAGTTTTTCGAGACATTGTATAAATTTGTGTATATTCAAGGAACGTACTTGAAGCCACACGTAGCCATCATGGATGGTATCACCATGGGAGCTGGGGCTGGAATTTCAATCCCAGGAATGTTTCGCGTGGTGACTGATAAGACTATATTTTCCAATCCAGAGGCCCAGATAGGTTTCCATCCTGATGCAGGGGCTTCCTTTTATCTGTCTCGTCTACCTGGCTACCTAGGAGAATACTTAGCTCTTACAGGAGACAAGCTTAATGGTGTGGAGATGGTTGCCTGTCGCCTTGCTACGCACTATGCGTTAAATGCGAGACTTGCTATGGTTGAAGAACGCCTTGGAAATTTAGTTACAGATGAACCTTCTGTAATAGAAACAGCTCTTGCACAATATGGTGACCTTGTTTATCTAGACAGGAGGAGTATACTTTCTAAGCTCGACGTTATTGATAGATGTTTCAGCCATGACACAATTGAGGAAATTACTGATGCTTTGGAGAAGGAAGCTGCTGACTCTTATGATGAATGGTGCAAAACAGTCCTCAAGAAAATAAAAGAAGCCTCCCCCTTGAGTTTGATAGTTTCATTACGATCGATACGCGAGGGTAGATTTCAATCTCTAGATCAGTGTCTGGCTCGTGAATATCGTATATCTCTTGCTGCAATTTCTAACCGGGTCTCGAGTGACTTCTCTGAGGGCGTTCGAGCAAGATTGGTAGACAAGGACTTTGCGCCCAAGTGGAACCCCCCTAGTTTCAAAGATGTTTCCAAAGACATGGTTGATTGCTATTTCTCACCGCTTCCTGACGTTGAGCCGGAGCTGAAGCTGCCTACAGCATTGCGAGAGCCATTTATGCAAGAGACGGATTCACCCAAAAAATGA

Protein Analysis

417

Amino Acids

46.36

Weight (kDa)

6.16

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014122)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 123
AccB7I CCANNNNNTGG 1 cut(s) 130
AccBSI CCGCTC 1 cut(s) 164
AccI GTMKAC 3 cut(s) 580, 793, 1086
AccII CGCG 2 cut(s) 492, 969
AciI CCGC 3 cut(s) 41, 164, 1166
AcsI RAATTY 3 cut(s) 389, 468, 712
AcuI CTGAAG 2 cut(s) 245, 1211
AcyI GRCGYC 1 cut(s) 120
AfaI GTAC 1 cut(s) 413
AfiI CCNNNNNNNGG 4 cut(s) 130, 136, 263, 554
AflIII ACRYGT 1 cut(s) 424
AgsI TTSAA 7 cut(s) 23, 404, 418, 474, 698, 983, 1126
AhlI ACTAGT 1 cut(s) 334
AjnI CCWGG 4 cut(s) 123, 129, 478, 583
AjuI GAANNNNNNNTTGG 2 cut(s) 690, 722
Alw26I GTCTC 7 cut(s) 223, 371, 579, 612, 676, 1051, 1223
AlwNI CAGNNNCTG 3 cut(s) 130, 317, 1000
Ama87I CYCGRG 1 cut(s) 1048
AoxI GGCC 2 cut(s) 179, 528
ApeKI GCWGC 5 cut(s) 60, 215, 875, 1028, 1195
ApoI RAATTY 3 cut(s) 389, 468, 712
ArsI GACNNNNNNTTYG 4 cut(s) 251, 283, 1079, 1111
AspA2I CCTAGG 1 cut(s) 592
AspLEI GCGC 2 cut(s) 305, 1102
AspS9I GGNCC 2 cut(s) 127, 529
AsuC2I CCSGG 2 cut(s) 257, 1043
AsuHPI GGTGA 5 cut(s) 439, 508, 776, 1155, 1230
AvaI CYCGRG 1 cut(s) 1048
AvaII GGWCC 1 cut(s) 127
AvrII CCTAGG 1 cut(s) 592
BauI CACGAG 1 cut(s) 1005
BbvI GCAGC 5 cut(s) 72, 227, 862, 1015, 1182
BccI CCATC 5 cut(s) 190, 434, 440, 552, 634
BciT130I CCWGG 4 cut(s) 125, 131, 480, 585
BcnI CCSGG 2 cut(s) 257, 1043
BcoDI GTCTC 7 cut(s) 223, 371, 579, 612, 676, 1051, 1223
BcuI ACTAGT 1 cut(s) 334
BfaI CTAG 5 cut(s) 335, 593, 779, 989, 1119
BfmI CTRYAG 1 cut(s) 1200
BisI GCNGC 7 cut(s) 42, 61, 165, 216, 876, 1029, 1196
BlnI CCTAGG 1 cut(s) 592
BlsI GCNGC 7 cut(s) 43, 62, 166, 217, 877, 1030, 1197
Bme1390I CCNGG 6 cut(s) 125, 131, 257, 480, 585, 1043
Bme18I GGWCC 1 cut(s) 127
BmeT110I CYCGRG 1 cut(s) 1048
BmgT120I GGNCC 2 cut(s) 127, 529
BmiI GGNNCC 1 cut(s) 1112
BmrFI CCNGG 6 cut(s) 125, 131, 257, 480, 585, 1043
BmsI GCATC 3 cut(s) 304, 541, 847
BpuEI CTTGAG 2 cut(s) 896, 958
BpuMI CCSGG 2 cut(s) 257, 1043
Bsa29I ATCGAT 1 cut(s) 962
BsaAI YACGTR 1 cut(s) 427
BsaBI GATNNNNATC 1 cut(s) 982
BsaHI GRCGYC 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 1051
BsaJI CCNNGG 5 cut(s) 210, 450, 478, 592, 706
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 136, 263, 554
Bse3DI GCAATG 1 cut(s) 1205
Bse8I GATNNNNATC 1 cut(s) 982
BseBI CCWGG 4 cut(s) 125, 131, 480, 585
BseCI ATCGAT 1 cut(s) 962
BseDI CCNNGG 5 cut(s) 210, 450, 478, 592, 706
BseGI GGATG 2 cut(s) 445, 544
BseJI GATNNNNATC 1 cut(s) 982
BseLI CCNNNNNNNGG 4 cut(s) 130, 136, 263, 554
BseMI GCAATG 1 cut(s) 1205
BseMII CTCAG 3 cut(s) 20, 59, 1053
BseRI GAGGAG 2 cut(s) 46, 802
BseXI GCAGC 5 cut(s) 72, 227, 862, 1015, 1182
BseYI CCCAGC 1 cut(s) 458
BsgI GTGCAG 1 cut(s) 171
Bsh1236I CGCG 2 cut(s) 492, 969
Bsh1285I CGRYCG 1 cut(s) 962
BshFI GGCC 2 cut(s) 181, 530
BshVI ATCGAT 1 cut(s) 962
BsiEI CGRYCG 1 cut(s) 962
BsiHKCI CYCGRG 1 cut(s) 1048
BsiSI CCGG 4 cut(s) 257, 306, 1042, 1184
BslI CCNNNNNNNGG 4 cut(s) 130, 136, 263, 554
BsmAI GTCTC 7 cut(s) 223, 371, 579, 612, 676, 1051, 1223
BsmBI CGTCTC 1 cut(s) 1223
BsnI GGCC 2 cut(s) 181, 530
Bso31I GGTCTC 1 cut(s) 1051
BsoBI CYCGRG 1 cut(s) 1048
Bsp143I GATC 2 cut(s) 959, 991
Bsp19I CCATGG 2 cut(s) 210, 450
BspACI CCGC 3 cut(s) 41, 164, 1166
BspANI GGCC 2 cut(s) 181, 530
BspCNI CTCAG 3 cut(s) 21, 58, 1054
BspDI ATCGAT 1 cut(s) 962
BspFNI CGCG 2 cut(s) 492, 969
BspLI GGNNCC 1 cut(s) 1112
BspQI GCTCTTC 1 cut(s) 142
BspTNI GGTCTC 1 cut(s) 1051
BsrBI CCGCTC 1 cut(s) 164
BsrDI GCAATG 1 cut(s) 1205
BssECI CCNNGG 5 cut(s) 210, 450, 478, 592, 706
BssMI GATC 2 cut(s) 959, 991
BssNAI GTATAC 1 cut(s) 794
BssNI GRCGYC 1 cut(s) 120
BssSI CACGAG 1 cut(s) 1005
BssT1I CCWWGG 4 cut(s) 210, 450, 592, 706
Bst1107I GTATAC 1 cut(s) 794
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 4 cut(s) 125, 131, 480, 585
Bst4CI ACNGT 4 cut(s) 139, 206, 234, 907
Bst6I CTCTTC 2 cut(s) 142, 221
BstACI GRCGYC 1 cut(s) 120
BstAPI GCANNNNNTGC 1 cut(s) 194
BstBAI YACGTR 1 cut(s) 427
BstDEI CTNAG 5 cut(s) 29, 45, 604, 801, 1062
BstDSI CCRYGG 2 cut(s) 210, 450
BstEII GGTNACC 1 cut(s) 764
BstENI CCTNNNNNAGG 1 cut(s) 552
BstF5I GGATG 2 cut(s) 445, 544
BstFNI CGCG 2 cut(s) 492, 969
BstHHI GCGC 2 cut(s) 305, 1102
BstKTI GATC 2 cut(s) 962, 994
BstMAI GTCTC 7 cut(s) 223, 371, 579, 612, 676, 1051, 1223
BstMBI GATC 2 cut(s) 959, 991
BstMCI CGRYCG 1 cut(s) 962
BstMWI GCNNNNNNNGC 8 cut(s) 23, 89, 194, 302, 677, 686, 1195, 1222
BstNI CCWGG 4 cut(s) 125, 131, 480, 585
BstPI GGTNACC 1 cut(s) 764
BstSCI CCNGG 6 cut(s) 123, 129, 255, 478, 583, 1041
BstSFI CTRYAG 1 cut(s) 1200
BstUI CGCG 2 cut(s) 492, 969
BstV1I GCAGC 5 cut(s) 72, 227, 862, 1015, 1182
BstXI CCANNNNNNTGG 1 cut(s) 1144
BstZ17I GTATAC 1 cut(s) 794
Bsu15I ATCGAT 1 cut(s) 962
BsuRI GGCC 2 cut(s) 181, 530
BsuTUI ATCGAT 1 cut(s) 962
BtgI CCRYGG 2 cut(s) 210, 450
BtgZI GCGATG 1 cut(s) 59
BtsCI GGATG 2 cut(s) 445, 544
BtsIMutI CAGTG 1 cut(s) 1001
CaiI CAGNNNCTG 3 cut(s) 130, 317, 1000
CfoI GCGC 2 cut(s) 305, 1102
Cfr13I GGNCC 2 cut(s) 127, 529
ClaI ATCGAT 1 cut(s) 962
CsiI ACCWGGT 1 cut(s) 129
Csp6I GTAC 1 cut(s) 412
CviAII CATG 6 cut(s) 211, 243, 436, 451, 833, 1144
CviQI GTAC 1 cut(s) 412
DdeI CTNAG 5 cut(s) 29, 45, 604, 801, 1062
DpnI GATC 2 cut(s) 961, 993
DpnII GATC 2 cut(s) 959, 991
Eam1104I CTCTTC 2 cut(s) 142, 221
EarI CTCTTC 2 cut(s) 142, 221
Eco130I CCWWGG 4 cut(s) 210, 450, 592, 706
Eco31I GGTCTC 1 cut(s) 1051
Eco47I GGWCC 1 cut(s) 127
Eco57I CTGAAG 2 cut(s) 245, 1211
Eco88I CYCGRG 1 cut(s) 1048
Eco91I GGTNACC 1 cut(s) 764
EcoNI CCTNNNNNAGG 1 cut(s) 552
EcoO109I RGGNCCY 1 cut(s) 127
EcoO65I GGTNACC 1 cut(s) 764
EcoRII CCWGG 4 cut(s) 123, 129, 478, 583
EcoT14I CCWWGG 4 cut(s) 210, 450, 592, 706
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 4 cut(s) 210, 450, 592, 706
Esp3I CGTCTC 1 cut(s) 1223
FaeI CATG 6 cut(s) 214, 246, 439, 454, 836, 1147
FalI AAGNNNNNCTT 4 cut(s) 336, 368, 690, 722
FatI CATG 6 cut(s) 210, 242, 435, 450, 832, 1143
FblI GTMKAC 3 cut(s) 580, 793, 1086
Fnu4HI GCNGC 7 cut(s) 42, 61, 165, 216, 876, 1029, 1196
FokI GGATG 2 cut(s) 452, 531
Fsp4HI GCNGC 7 cut(s) 42, 61, 165, 216, 876, 1029, 1196
FspBI CTAG 5 cut(s) 335, 593, 779, 989, 1119
GlaI GCGC 2 cut(s) 304, 1101
GluI GCNGC 7 cut(s) 42, 61, 165, 216, 876, 1029, 1196
GsaI CCCAGC 1 cut(s) 462
HaeIII GGCC 2 cut(s) 181, 530
HapII CCGG 4 cut(s) 257, 306, 1042, 1184
HhaI GCGC 2 cut(s) 305, 1102
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 6 cut(s) 214, 246, 439, 454, 836, 1147
Hin6I GCGC 2 cut(s) 303, 1100
HinP1I GCGC 2 cut(s) 303, 1100
HindIII AAGCTT 1 cut(s) 623
HinfI GANTC 4 cut(s) 239, 349, 881, 1235
HpaII CCGG 4 cut(s) 257, 306, 1042, 1184
HphI GGTGA 5 cut(s) 439, 508, 776, 1155, 1230
Hpy166II GTNNAC 3 cut(s) 581, 794, 1087
Hpy188I TCNGA 3 cut(s) 30, 48, 1063
Hpy8I GTNNAC 3 cut(s) 581, 794, 1087
Hpy99I CGWCG 3 cut(s) 119, 122, 812
HpyAV CCTTC 4 cut(s) 274, 338, 741, 862
HpyCH4III ACNGT 4 cut(s) 139, 206, 234, 907
HpyCH4IV ACGT 5 cut(s) 120, 410, 426, 810, 1176
HpyCH4V TGCA 7 cut(s) 4, 188, 554, 755, 900, 1031, 1225
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 89, 194, 302, 677, 686, 1195, 1222
HpyF3I CTNAG 5 cut(s) 29, 45, 604, 801, 1062
HpySE526I ACGT 5 cut(s) 120, 410, 426, 810, 1176
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 6 cut(s) 214, 246, 439, 454, 836, 1147
HspAI GCGC 2 cut(s) 303, 1100
Kzo9I GATC 2 cut(s) 959, 991
LguI GCTCTTC 1 cut(s) 142
LmnI GCTCC 3 cut(s) 308, 455, 1186
Lsp1109I GCAGC 5 cut(s) 72, 227, 862, 1015, 1182
LweI GCATC 3 cut(s) 304, 541, 847
MabI ACCWGGT 1 cut(s) 129
MaeI CTAG 5 cut(s) 335, 593, 779, 989, 1119
MaeII ACGT 5 cut(s) 120, 410, 426, 810, 1176
MaeIII GTNAC 5 cut(s) 133, 496, 718, 764, 1052
MalI GATC 2 cut(s) 961, 993
MbiI CCGCTC 1 cut(s) 164
MboI GATC 2 cut(s) 959, 991
MboII GAAGA 4 cut(s) 66, 159, 238, 710
MfeI CAATTG 1 cut(s) 840
MluCI AATT 7 cut(s) 168, 389, 468, 712, 840, 849, 1032
MlyI GAGTC 1 cut(s) 875
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 2 cut(s) 627, 674
MslI CAYNNNNRTG 1 cut(s) 549
MspI CCGG 4 cut(s) 257, 306, 1042, 1184
MspR9I CCNGG 6 cut(s) 125, 131, 257, 480, 585, 1043
MunI CAATTG 1 cut(s) 840
MvaI CCWGG 4 cut(s) 125, 131, 480, 585
MvnI CGCG 2 cut(s) 492, 969
MwoI GCNNNNNNNGC 8 cut(s) 23, 89, 194, 302, 677, 686, 1195, 1222
NciI CCSGG 2 cut(s) 257, 1043
NcoI CCATGG 2 cut(s) 210, 450
NdeII GATC 2 cut(s) 959, 991
NlaIII CATG 6 cut(s) 214, 246, 439, 454, 836, 1147
NlaIV GGNNCC 1 cut(s) 1112
NmuCI GTSAC 3 cut(s) 496, 764, 1052
NsiI ATGCAT 1 cut(s) 6
PaeR7I CTCGAG 1 cut(s) 1048
PciSI GCTCTTC 1 cut(s) 142
PcsI WCGNNNNNNNCGW 2 cut(s) 668, 1012
PfeI GAWTC 3 cut(s) 239, 349, 1235
PflFI GACNNNGTC 1 cut(s) 119
PflMI CCANNNNNTGG 1 cut(s) 130
PfoI TCCNGGA 1 cut(s) 123
PkrI GCNGC 7 cut(s) 43, 62, 166, 217, 877, 1030, 1197
Ple19I CGATCG 1 cut(s) 962
PleI GAGTC 1 cut(s) 875
PpsI GAGTC 1 cut(s) 875
Ppu21I YACGTR 1 cut(s) 427
PpuMI RGGWCCY 1 cut(s) 127
Psp5II RGGWCCY 1 cut(s) 127
Psp6I CCWGG 4 cut(s) 123, 129, 478, 583
PspEI GGTNACC 1 cut(s) 764
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 4 cut(s) 123, 129, 478, 583
PspN4I GGNNCC 1 cut(s) 1112
PspPI GGNCC 2 cut(s) 127, 529
PspPPI RGGWCCY 1 cut(s) 127
PstNI CAGNNNCTG 3 cut(s) 130, 317, 1000
PsyI GACNNNGTC 1 cut(s) 119
PvuI CGATCG 1 cut(s) 962
RsaI GTAC 1 cut(s) 413
RsaNI GTAC 1 cut(s) 412
RseI CAYNNNNRTG 1 cut(s) 549
SapI GCTCTTC 1 cut(s) 142
SaqAI TTAA 2 cut(s) 627, 674
SatI GCNGC 7 cut(s) 42, 61, 165, 216, 876, 1029, 1196
Sau3AI GATC 2 cut(s) 959, 991
Sau96I GGNCC 2 cut(s) 127, 529
SchI GAGTC 1 cut(s) 875
ScrFI CCNGG 6 cut(s) 125, 131, 257, 480, 585, 1043
SexAI ACCWGGT 1 cut(s) 129
SfaNI GCATC 3 cut(s) 304, 541, 847
SfcI CTRYAG 1 cut(s) 1200
Sfr274I CTCGAG 1 cut(s) 1048
SinI GGWCC 1 cut(s) 127
SlaI CTCGAG 1 cut(s) 1048
SmiMI CAYNNNNRTG 1 cut(s) 549
SmlI CTYRAG 3 cut(s) 911, 937, 1048
SmoI CTYRAG 3 cut(s) 911, 937, 1048
SpeI ACTAGT 1 cut(s) 334
Sse9I AATT 7 cut(s) 168, 389, 468, 712, 840, 849, 1032
SsiI CCGC 3 cut(s) 41, 164, 1166
SspMI CTAG 5 cut(s) 335, 593, 779, 989, 1119
StyD4I CCNGG 6 cut(s) 123, 129, 255, 478, 583, 1041
StyI CCWWGG 4 cut(s) 210, 450, 592, 706
TaaI ACNGT 4 cut(s) 139, 206, 234, 907
TaiI ACGT 5 cut(s) 123, 413, 429, 813, 1179
TaqI TCGA 7 cut(s) 158, 220, 375, 807, 962, 1049, 1072
TasI AATT 7 cut(s) 168, 389, 468, 712, 840, 849, 1032
TauI GCSGC 2 cut(s) 44, 167
TfiI GAWTC 3 cut(s) 239, 349, 1235
Tru1I TTAA 2 cut(s) 627, 674
Tru9I TTAA 2 cut(s) 627, 674
TscAI CASTG 1 cut(s) 1001
TseFI GTSAC 3 cut(s) 496, 764, 1052
TseI GCWGC 5 cut(s) 60, 215, 875, 1028, 1195
Tsp45I GTSAC 3 cut(s) 496, 764, 1052
TspDTI ATGAA 7 cut(s) 252, 293, 357, 372, 741, 906, 942
TspGWI ACGGA 1 cut(s) 1247
TspRI CASTG 1 cut(s) 1001
Tth111I GACNNNGTC 1 cut(s) 119
Van91I CCANNNNNTGG 1 cut(s) 130
VpaK11BI GGWCC 1 cut(s) 127
XagI CCTNNNNNAGG 1 cut(s) 552
XapI RAATTY 3 cut(s) 389, 468, 712
XbaI TCTAGA 2 cut(s) 778, 988
XhoI CTCGAG 1 cut(s) 1048
XmaJI CCTAGG 1 cut(s) 592
XmiI GTMKAC 3 cut(s) 580, 793, 1086
XspI CTAG 5 cut(s) 335, 593, 779, 989, 1119
ZraI GACGTC 1 cut(s) 121
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.