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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g08721 |
| malus_domestica | MD08G1069400.v1.1 MD15G1052700.v1.1 |
| prunus_persica | Prupe.1G406600_v2.0.a1 |
| pyrus_communis | pycom08g05720 |
| rosa_chinensis | RchiOBHm_Chr1g0343961 |
| rosa_laevigata | RLG00000028943 |
| rosa_multiflora | Rmu_ssc0000434.1_g000040 |
| rosa_roxburghii | Rroxscaffold_4G00310210 |
| rosa_rugosa | Rorug01G0170000 |
| rosa_samantha | Rh1AG186600 Rh1BG153000 Rh1CG172000 Rh1DG185300 |
| rosa_wichuraiana | Rw1G015390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 177 |
| AatII | GACGTC | 1 cut(s) | 248 |
| Acc16I | TGCGCA | 1 cut(s) | 786 |
| Acc36I | ACCTGC | 1 cut(s) | 1701 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1135, 1761 |
| AccBSI | CCGCTC | 3 cut(s) | 50, 1206, 1724 |
| AccI | GTMKAC | 2 cut(s) | 368, 528 |
| AccII | CGCG | 1 cut(s) | 935 |
| AccIII | TCCGGA | 1 cut(s) | 321 |
| AclWI | GGATC | 2 cut(s) | 435, 945 |
| AcoI | YGGCCR | 2 cut(s) | 69, 1196 |
| AcsI | RAATTY | 2 cut(s) | 13, 1378 |
| AcuI | CTGAAG | 2 cut(s) | 74, 909 |
| AcyI | GRCGYC | 2 cut(s) | 119, 245 |
| AfaI | GTAC | 1 cut(s) | 599 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 152, 549, 590, 628, 851, 964, 1135, 1205, 1761 |
| AflIII | ACRYGT | 2 cut(s) | 397, 1263 |
| AgsI | TTSAA | 3 cut(s) | 13, 167, 1555 |
| AjnI | CCWGG | 4 cut(s) | 589, 850, 1001, 1139 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 849, 881 |
| Alw21I | GWGCWC | 1 cut(s) | 557 |
| Alw26I | GTCTC | 2 cut(s) | 1079, 1489 |
| Alw44I | GTGCAC | 1 cut(s) | 553 |
| AlwI | GGATC | 2 cut(s) | 435, 945 |
| Ama87I | CYCGRG | 3 cut(s) | 152, 1319, 1492 |
| Aor13HI | TCCGGA | 1 cut(s) | 321 |
| AoxI | GGCC | 5 cut(s) | 69, 609, 1137, 1196, 1560 |
| ApaLI | GTGCAC | 1 cut(s) | 553 |
| ApeKI | GCWGC | 5 cut(s) | 250, 442, 586, 644, 1751 |
| ApoI | RAATTY | 2 cut(s) | 13, 1378 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 197, 229 |
| AspLEI | GCGC | 1 cut(s) | 787 |
| AspS9I | GGNCC | 3 cut(s) | 775, 1315, 1560 |
| AsuC2I | CCSGG | 5 cut(s) | 153, 154, 622, 813, 1048 |
| AvaI | CYCGRG | 3 cut(s) | 152, 1319, 1492 |
| AvaII | GGWCC | 2 cut(s) | 775, 1315 |
| BaeGI | GKGCMC | 1 cut(s) | 557 |
| BanII | GRGCYC | 2 cut(s) | 664, 1053 |
| Bbv12I | GWGCWC | 1 cut(s) | 557 |
| BbvI | GCAGC | 5 cut(s) | 237, 429, 573, 631, 1738 |
| BccI | CCATC | 3 cut(s) | 1105, 1369, 1628 |
| BceAI | ACGGC | 1 cut(s) | 174 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 909, 943 |
| BciT130I | CCWGG | 4 cut(s) | 591, 852, 1003, 1141 |
| BciVI | GTATCC | 1 cut(s) | 479 |
| BclI | TGATCA | 2 cut(s) | 1066, 1239 |
| BcnI | CCSGG | 5 cut(s) | 153, 154, 622, 813, 1048 |
| BcoDI | GTCTC | 2 cut(s) | 1079, 1489 |
| BfaI | CTAG | 1 cut(s) | 725 |
| BfmI | CTRYAG | 1 cut(s) | 645 |
| BfuAI | ACCTGC | 1 cut(s) | 1701 |
| BfuI | GTATCC | 1 cut(s) | 479 |
| BlpI | GCTNAGC | 1 cut(s) | 1456 |
| BmcAI | AGTACT | 1 cut(s) | 599 |
| Bme1390I | CCNGG | 9 cut(s) | 153, 154, 591, 622, 813, 852, 1003, 1048, 1141 |
| Bme18I | GGWCC | 2 cut(s) | 775, 1315 |
| BmeT110I | CYCGRG | 3 cut(s) | 152, 1319, 1492 |
| BmgT120I | GGNCC | 3 cut(s) | 775, 1315, 1560 |
| BmiI | GGNNCC | 2 cut(s) | 661, 1316 |
| BmrFI | CCNGG | 9 cut(s) | 153, 154, 591, 622, 813, 852, 1003, 1048, 1141 |
| BmrI | ACTGGG | 1 cut(s) | 1567 |
| BmsI | GCATC | 5 cut(s) | 339, 342, 1014, 1199, 1281 |
| BmuI | ACTGGG | 1 cut(s) | 1567 |
| BpmI | CTGGAG | 1 cut(s) | 678 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1456 |
| BpuEI | CTTGAG | 1 cut(s) | 299 |
| BpuMI | CCSGG | 5 cut(s) | 153, 154, 622, 813, 1048 |
| Bsa29I | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| BsaHI | GRCGYC | 2 cut(s) | 119, 245 |
| BsaJI | CCNNGG | 7 cut(s) | 152, 153, 231, 423, 933, 1318, 1755 |
| BsaWI | WCCGGW | 1 cut(s) | 321 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1577, 1607 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 152, 549, 590, 628, 851, 964, 1135, 1205, 1761 |
| Bse1I | ACTGG | 3 cut(s) | 518, 1471, 1562 |
| Bse3DI | GCAATG | 3 cut(s) | 146, 274, 1057 |
| BseAI | TCCGGA | 1 cut(s) | 321 |
| BseBI | CCWGG | 4 cut(s) | 591, 852, 1003, 1141 |
| BseCI | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| BseDI | CCNNGG | 7 cut(s) | 152, 153, 231, 423, 933, 1318, 1755 |
| BseGI | GGATG | 3 cut(s) | 394, 681, 1214 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 152, 549, 590, 628, 851, 964, 1135, 1205, 1761 |
| BseMI | GCAATG | 3 cut(s) | 146, 274, 1057 |
| BseMII | CTCAG | 4 cut(s) | 330, 429, 1470, 1535 |
| BseNI | ACTGG | 3 cut(s) | 518, 1471, 1562 |
| BseRI | GAGGAG | 3 cut(s) | 310, 1622, 1625 |
| BseSI | GKGCMC | 1 cut(s) | 557 |
| BseX3I | CGGCCG | 1 cut(s) | 1196 |
| BseXI | GCAGC | 5 cut(s) | 237, 429, 573, 631, 1738 |
| BsgI | GTGCAG | 1 cut(s) | 586 |
| Bsh1236I | CGCG | 1 cut(s) | 935 |
| Bsh1285I | CGRYCG | 3 cut(s) | 21, 1104, 1199 |
| BshFI | GGCC | 5 cut(s) | 71, 611, 1139, 1198, 1562 |
| BshVI | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| BsiEI | CGRYCG | 3 cut(s) | 21, 1104, 1199 |
| BsiHKAI | GWGCWC | 1 cut(s) | 557 |
| BsiHKCI | CYCGRG | 3 cut(s) | 152, 1319, 1492 |
| BsiSI | CCGG | 6 cut(s) | 153, 322, 622, 813, 1047, 1195 |
| BslFI | GGGAC | 3 cut(s) | 146, 170, 1200 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 152, 549, 590, 628, 851, 964, 1135, 1205, 1761 |
| BsmAI | GTCTC | 2 cut(s) | 1079, 1489 |
| BsmFI | GGGAC | 3 cut(s) | 146, 170, 1200 |
| BsnI | GGCC | 5 cut(s) | 71, 611, 1139, 1198, 1562 |
| BsoBI | CYCGRG | 3 cut(s) | 152, 1319, 1492 |
| Bsp1286I | GDGCHC | 3 cut(s) | 557, 664, 1053 |
| Bsp13I | TCCGGA | 1 cut(s) | 321 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1456 |
| Bsp19I | CCATGG | 1 cut(s) | 1755 |
| BspANI | GGCC | 5 cut(s) | 71, 611, 1139, 1198, 1562 |
| BspCNI | CTCAG | 4 cut(s) | 331, 430, 1469, 1534 |
| BspDI | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| BspEI | TCCGGA | 1 cut(s) | 321 |
| BspFNI | CGCG | 1 cut(s) | 935 |
| BspHI | TCATGA | 1 cut(s) | 961 |
| BspLI | GGNNCC | 2 cut(s) | 661, 1316 |
| BspMAI | CTGCAG | 1 cut(s) | 649 |
| BspMI | ACCTGC | 1 cut(s) | 1701 |
| BspPI | GGATC | 2 cut(s) | 435, 945 |
| BsrBI | CCGCTC | 3 cut(s) | 50, 1206, 1724 |
| BsrDI | GCAATG | 3 cut(s) | 146, 274, 1057 |
| BsrI | ACTGG | 3 cut(s) | 518, 1471, 1562 |
| BssECI | CCNNGG | 7 cut(s) | 152, 153, 231, 423, 933, 1318, 1755 |
| BssNAI | GTATAC | 1 cut(s) | 369 |
| BssNI | GRCGYC | 2 cut(s) | 119, 245 |
| BssT1I | CCWWGG | 2 cut(s) | 231, 1755 |
| Bst1107I | GTATAC | 1 cut(s) | 369 |
| Bst2UI | CCWGG | 4 cut(s) | 591, 852, 1003, 1141 |
| Bst4CI | ACNGT | 6 cut(s) | 552, 775, 828, 864, 1293, 1730 |
| Bst6I | CTCTTC | 6 cut(s) | 50, 120, 885, 1095, 1550, 1655 |
| BstACI | GRCGYC | 2 cut(s) | 119, 245 |
| BstC8I | GCNNGC | 4 cut(s) | 143, 255, 933, 1341 |
| BstDEI | CTNAG | 7 cut(s) | 258, 339, 438, 950, 1456, 1521, 1615 |
| BstDSI | CCRYGG | 2 cut(s) | 933, 1755 |
| BstEII | GGTNACC | 1 cut(s) | 983 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 962 |
| BstF5I | GGATG | 3 cut(s) | 394, 681, 1214 |
| BstFNI | CGCG | 1 cut(s) | 935 |
| BstHHI | GCGC | 1 cut(s) | 787 |
| BstMAI | GTCTC | 2 cut(s) | 1079, 1489 |
| BstMCI | CGRYCG | 3 cut(s) | 21, 1104, 1199 |
| BstNI | CCWGG | 4 cut(s) | 591, 852, 1003, 1141 |
| BstNSI | RCATGY | 3 cut(s) | 145, 401, 1267 |
| BstPI | GGTNACC | 1 cut(s) | 983 |
| BstSCI | CCNGG | 9 cut(s) | 151, 152, 589, 620, 811, 850, 1001, 1046, 1139 |
| BstSFI | CTRYAG | 1 cut(s) | 645 |
| BstSLI | GKGCMC | 1 cut(s) | 557 |
| BstUI | CGCG | 1 cut(s) | 935 |
| BstV1I | GCAGC | 5 cut(s) | 237, 429, 573, 631, 1738 |
| BstZ17I | GTATAC | 1 cut(s) | 369 |
| BstZI | CGGCCG | 1 cut(s) | 1196 |
| Bsu15I | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| BsuI | GTATCC | 1 cut(s) | 479 |
| BsuRI | GGCC | 5 cut(s) | 71, 611, 1139, 1198, 1562 |
| BsuTUI | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| BtgI | CCRYGG | 2 cut(s) | 933, 1755 |
| BtsCI | GGATG | 3 cut(s) | 394, 681, 1214 |
| BtsIMutI | CAGTG | 1 cut(s) | 435 |
| BveI | ACCTGC | 1 cut(s) | 1701 |
| Cac8I | GCNNGC | 4 cut(s) | 143, 255, 933, 1341 |
| CciI | TCATGA | 1 cut(s) | 961 |
| CfoI | GCGC | 1 cut(s) | 787 |
| Cfr13I | GGNCC | 3 cut(s) | 775, 1315, 1560 |
| Cfr42I | CCGCGG | 1 cut(s) | 936 |
| Cfr9I | CCCGGG | 1 cut(s) | 152 |
| ClaI | ATCGAT | 3 cut(s) | 21, 940, 1104 |
| CseI | GACGC | 2 cut(s) | 94, 108 |
| Csp6I | GTAC | 1 cut(s) | 598 |
| CviAII | CATG | 8 cut(s) | 142, 398, 580, 628, 962, 1264, 1538, 1756 |
| CviQI | GTAC | 1 cut(s) | 598 |
| DdeI | CTNAG | 7 cut(s) | 258, 339, 438, 950, 1456, 1521, 1615 |
| EaeI | YGGCCR | 2 cut(s) | 69, 1196 |
| EagI | CGGCCG | 1 cut(s) | 1196 |
| Eam1104I | CTCTTC | 6 cut(s) | 50, 120, 885, 1095, 1550, 1655 |
| EarI | CTCTTC | 6 cut(s) | 50, 120, 885, 1095, 1550, 1655 |
| EciI | GGCGGA | 1 cut(s) | 1033 |
| EclXI | CGGCCG | 1 cut(s) | 1196 |
| Eco130I | CCWWGG | 2 cut(s) | 231, 1755 |
| Eco24I | GRGCYC | 2 cut(s) | 664, 1053 |
| Eco32I | GATATC | 1 cut(s) | 1744 |
| Eco47I | GGWCC | 2 cut(s) | 775, 1315 |
| Eco52I | CGGCCG | 1 cut(s) | 1196 |
| Eco57I | CTGAAG | 2 cut(s) | 74, 909 |
| Eco88I | CYCGRG | 3 cut(s) | 152, 1319, 1492 |
| Eco91I | GGTNACC | 1 cut(s) | 983 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 962 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1315 |
| EcoO65I | GGTNACC | 1 cut(s) | 983 |
| EcoRI | GAATTC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 4 cut(s) | 589, 850, 1001, 1139 |
| EcoRV | GATATC | 1 cut(s) | 1744 |
| EcoT14I | CCWWGG | 2 cut(s) | 231, 1755 |
| EcoT38I | GRGCYC | 2 cut(s) | 664, 1053 |
| ErhI | CCWWGG | 2 cut(s) | 231, 1755 |
| FaeI | CATG | 8 cut(s) | 145, 401, 583, 631, 965, 1267, 1541, 1759 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1074, 1106 |
| FaqI | GGGAC | 3 cut(s) | 146, 170, 1200 |
| FatI | CATG | 8 cut(s) | 141, 397, 579, 627, 961, 1263, 1537, 1755 |
| FauI | CCCGC | 3 cut(s) | 672, 940, 1728 |
| FauNDI | CATATG | 2 cut(s) | 973, 1033 |
| FbaI | TGATCA | 2 cut(s) | 1066, 1239 |
| FblI | GTMKAC | 2 cut(s) | 368, 528 |
| FokI | GGATG | 3 cut(s) | 401, 668, 1221 |
| FriOI | GRGCYC | 2 cut(s) | 664, 1053 |
| FspBI | CTAG | 1 cut(s) | 725 |
| FspI | TGCGCA | 1 cut(s) | 786 |
| GlaI | GCGC | 1 cut(s) | 786 |
| GsuI | CTGGAG | 1 cut(s) | 678 |
| HaeIII | GGCC | 5 cut(s) | 71, 611, 1139, 1198, 1562 |
| HapII | CCGG | 6 cut(s) | 153, 322, 622, 813, 1047, 1195 |
| HgaI | GACGC | 2 cut(s) | 94, 108 |
| HhaI | GCGC | 1 cut(s) | 787 |
| Hin1I | GRCGYC | 2 cut(s) | 119, 245 |
| Hin1II | CATG | 8 cut(s) | 145, 401, 583, 631, 965, 1267, 1541, 1759 |
| Hin6I | GCGC | 1 cut(s) | 785 |
| HinP1I | GCGC | 1 cut(s) | 785 |
| HincII | GTYRAC | 2 cut(s) | 529, 679 |
| HindII | GTYRAC | 2 cut(s) | 529, 679 |
| HinfI | GANTC | 3 cut(s) | 1087, 1679, 1689 |
| HpaI | GTTAAC | 1 cut(s) | 679 |
| HpaII | CCGG | 6 cut(s) | 153, 322, 622, 813, 1047, 1195 |
| Hpy166II | GTNNAC | 4 cut(s) | 369, 529, 555, 679 |
| Hpy188I | TCNGA | 9 cut(s) | 54, 124, 184, 427, 709, 1110, 1170, 1524, 1748 |
| Hpy188III | TCNNGA | 4 cut(s) | 322, 657, 962, 1321 |
| Hpy8I | GTNNAC | 4 cut(s) | 369, 529, 555, 679 |
| Hpy99I | CGWCG | 5 cut(s) | 88, 124, 250, 709, 775 |
| HpyAV | CCTTC | 7 cut(s) | 161, 283, 968, 1004, 1038, 1305, 1418 |
| HpyCH4III | ACNGT | 6 cut(s) | 552, 775, 828, 864, 1293, 1730 |
| HpyCH4IV | ACGT | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 7 cut(s) | 258, 339, 438, 950, 1456, 1521, 1615 |
| HpySE526I | ACGT | 1 cut(s) | 245 |
| Hsp92I | GRCGYC | 2 cut(s) | 119, 245 |
| Hsp92II | CATG | 8 cut(s) | 145, 401, 583, 631, 965, 1267, 1541, 1759 |
| HspAI | GCGC | 1 cut(s) | 785 |
| Kpn2I | TCCGGA | 1 cut(s) | 321 |
| Ksp22I | TGATCA | 2 cut(s) | 1066, 1239 |
| KspAI | GTTAAC | 1 cut(s) | 679 |
| KspI | CCGCGG | 1 cut(s) | 936 |
| LmnI | GCTCC | 7 cut(s) | 324, 572, 659, 1046, 1171, 1197, 1269 |
| Lsp1109I | GCAGC | 5 cut(s) | 237, 429, 573, 631, 1738 |
| LweI | GCATC | 5 cut(s) | 339, 342, 1014, 1199, 1281 |
| MaeI | CTAG | 1 cut(s) | 725 |
| MaeII | ACGT | 1 cut(s) | 245 |
| MaeIII | GTNAC | 7 cut(s) | 76, 191, 203, 983, 1259, 1287, 1501 |
| MbiI | CCGCTC | 3 cut(s) | 50, 1206, 1724 |
| MfeI | CAATTG | 1 cut(s) | 1606 |
| MhlI | GDGCHC | 3 cut(s) | 557, 664, 1053 |
| MlyI | GAGTC | 2 cut(s) | 1081, 1683 |
| MmeI | TCCRAC | 3 cut(s) | 102, 687, 1707 |
| MroI | TCCGGA | 1 cut(s) | 321 |
| MseI | TTAA | 5 cut(s) | 504, 678, 1080, 1391, 1467 |
| MslI | CAYNNNNRTG | 2 cut(s) | 284, 1062 |
| MspA1I | CMGCKG | 3 cut(s) | 74, 586, 935 |
| MspI | CCGG | 6 cut(s) | 153, 322, 622, 813, 1047, 1195 |
| MspR9I | CCNGG | 9 cut(s) | 153, 154, 591, 622, 813, 852, 1003, 1048, 1141 |
| MunI | CAATTG | 1 cut(s) | 1606 |
| MvaI | CCWGG | 4 cut(s) | 591, 852, 1003, 1141 |
| MvnI | CGCG | 1 cut(s) | 935 |
| NciI | CCSGG | 5 cut(s) | 153, 154, 622, 813, 1048 |
| NcoI | CCATGG | 1 cut(s) | 1755 |
| NdeI | CATATG | 2 cut(s) | 973, 1033 |
| NlaIII | CATG | 8 cut(s) | 145, 401, 583, 631, 965, 1267, 1541, 1759 |
| NlaIV | GGNNCC | 2 cut(s) | 661, 1316 |
| NmeAIII | GCCGAG | 3 cut(s) | 1076, 1227, 1686 |
| NmuCI | GTSAC | 3 cut(s) | 191, 203, 1287 |
| NsbI | TGCGCA | 1 cut(s) | 786 |
| NspI | RCATGY | 3 cut(s) | 145, 401, 1267 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PagI | TCATGA | 1 cut(s) | 961 |
| PciI | ACATGT | 2 cut(s) | 397, 1263 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 14, 213 |
| PfeI | GAWTC | 1 cut(s) | 1679 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1135, 1761 |
| Ple19I | CGATCG | 2 cut(s) | 21, 1104 |
| PleI | GAGTC | 2 cut(s) | 1081, 1683 |
| PpsI | GAGTC | 2 cut(s) | 1081, 1683 |
| PpuMI | RGGWCCY | 1 cut(s) | 1315 |
| PscI | ACATGT | 2 cut(s) | 397, 1263 |
| PsiI | TTATAA | 1 cut(s) | 177 |
| Psp5II | RGGWCCY | 1 cut(s) | 1315 |
| Psp6I | CCWGG | 4 cut(s) | 589, 850, 1001, 1139 |
| PspEI | GGTNACC | 1 cut(s) | 983 |
| PspGI | CCWGG | 4 cut(s) | 589, 850, 1001, 1139 |
| PspN4I | GGNNCC | 2 cut(s) | 661, 1316 |
| PspPI | GGNCC | 3 cut(s) | 775, 1315, 1560 |
| PspPPI | RGGWCCY | 1 cut(s) | 1315 |
| PstI | CTGCAG | 1 cut(s) | 649 |
| PvuI | CGATCG | 2 cut(s) | 21, 1104 |
| RsaI | GTAC | 1 cut(s) | 599 |
| RsaNI | GTAC | 1 cut(s) | 598 |
| RseI | CAYNNNNRTG | 2 cut(s) | 284, 1062 |
| SacII | CCGCGG | 1 cut(s) | 936 |
| SalI | GTCGAC | 1 cut(s) | 527 |
| SaqAI | TTAA | 5 cut(s) | 504, 678, 1080, 1391, 1467 |
| Sau96I | GGNCC | 3 cut(s) | 775, 1315, 1560 |
| ScaI | AGTACT | 1 cut(s) | 599 |
| SchI | GAGTC | 2 cut(s) | 1081, 1683 |
| ScrFI | CCNGG | 9 cut(s) | 153, 154, 591, 622, 813, 852, 1003, 1048, 1141 |
| SduI | GDGCHC | 3 cut(s) | 557, 664, 1053 |
| SfaNI | GCATC | 5 cut(s) | 339, 342, 1014, 1199, 1281 |
| SfcI | CTRYAG | 1 cut(s) | 645 |
| Sfr303I | CCGCGG | 1 cut(s) | 936 |
| SgrBI | CCGCGG | 1 cut(s) | 936 |
| SinI | GGWCC | 2 cut(s) | 775, 1315 |
| SmaI | CCCGGG | 1 cut(s) | 154 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 284, 1062 |
| SmlI | CTYRAG | 1 cut(s) | 314 |
| SmoI | CTYRAG | 1 cut(s) | 314 |
| SphI | GCATGC | 1 cut(s) | 145 |
| SspI | AATATT | 1 cut(s) | 199 |
| SspMI | CTAG | 1 cut(s) | 725 |
| StyD4I | CCNGG | 9 cut(s) | 151, 152, 589, 620, 811, 850, 1001, 1046, 1139 |
| StyI | CCWWGG | 2 cut(s) | 231, 1755 |
| TaaI | ACNGT | 6 cut(s) | 552, 775, 828, 864, 1293, 1730 |
| TaiI | ACGT | 1 cut(s) | 248 |
| TaqI | TCGA | 8 cut(s) | 17, 21, 350, 528, 834, 940, 1104, 1159 |
| TatI | WGTACW | 1 cut(s) | 597 |
| TauI | GCSGC | 6 cut(s) | 42, 74, 383, 586, 1201, 1664 |
| TfiI | GAWTC | 1 cut(s) | 1679 |
| Tru1I | TTAA | 5 cut(s) | 504, 678, 1080, 1391, 1467 |
| Tru9I | TTAA | 5 cut(s) | 504, 678, 1080, 1391, 1467 |
| TscAI | CASTG | 1 cut(s) | 442 |
| TseFI | GTSAC | 3 cut(s) | 191, 203, 1287 |
| TseI | GCWGC | 5 cut(s) | 250, 442, 586, 644, 1751 |
| Tsp45I | GTSAC | 3 cut(s) | 191, 203, 1287 |
| TspDTI | ATGAA | 7 cut(s) | 536, 568, 752, 950, 1020, 1247, 1705 |
| TspGWI | ACGGA | 2 cut(s) | 401, 620 |
| TspMI | CCCGGG | 1 cut(s) | 152 |
| TspRI | CASTG | 1 cut(s) | 442 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1135, 1761 |
| VneI | GTGCAC | 1 cut(s) | 553 |
| VpaK11BI | GGWCC | 2 cut(s) | 775, 1315 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 962 |
| XapI | RAATTY | 2 cut(s) | 13, 1378 |
| XceI | RCATGY | 3 cut(s) | 145, 401, 1267 |
| XmaI | CCCGGG | 1 cut(s) | 152 |
| XmiI | GTMKAC | 2 cut(s) | 368, 528 |
| XspI | CTAG | 1 cut(s) | 725 |
| ZraI | GACGTC | 1 cut(s) | 246 |
| ZrmI | AGTACT | 1 cut(s) | 599 |