Homeobox protein knotted-1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08150 |
| fragaria_vesca | FvH4_2g32400 FvH4_2g32400 |
| malus_domestica | MD08G1075200.v1.1 MD15G1062700.v1.1 |
| prunus_persica | Prupe.1G416700_v2.0.a1 Prupe.1G416700_v2.0.a1 |
| pyrus_communis | pycom08g06220 pycom15g05940 |
| rosa_chinensis | RchiOBHm_Chr6g0310301 |
| rosa_laevigata | RLG00000010493 |
| rosa_multiflora | Rmu_sc0002348.1_g000017 |
| rosa_roxburghii | Rroxscaffold_7G00158680 |
| rosa_rugosa | Rorug06G0378500 Rorug06G0378500 Rorug06G0378600 Rorug06G0378700 |
| rosa_samantha | Rh6AG493000 Rh6BG502600 Rh6CG507600 Rh6DG493700 |
| rosa_wichuraiana | Rw6G042900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 912 |
| Acc36I | ACCTGC | 1 cut(s) | 912 |
| AccB1I | GGYRCC | 1 cut(s) | 402 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 161, 514 |
| AccI | GTMKAC | 1 cut(s) | 1073 |
| AciI | CCGC | 7 cut(s) | 23, 231, 234, 243, 246, 249, 1067 |
| AclWI | GGATC | 3 cut(s) | 116, 863, 1092 |
| AcoI | YGGCCR | 2 cut(s) | 331, 1031 |
| AcsI | RAATTY | 1 cut(s) | 341 |
| AcuI | CTGAAG | 6 cut(s) | 570, 840, 873, 900, 959, 1125 |
| AfaI | GTAC | 1 cut(s) | 476 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 161, 514, 1201 |
| AflII | CTTAAG | 1 cut(s) | 928 |
| AgeI | ACCGGT | 1 cut(s) | 1076 |
| AgsI | TTSAA | 5 cut(s) | 224, 443, 597, 609, 722 |
| AjnI | CCWGG | 2 cut(s) | 280, 989 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 399, 431, 1046, 1078 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1139, 1171 |
| Alw21I | GWGCWC | 4 cut(s) | 289, 431, 523, 894 |
| Alw26I | GTCTC | 3 cut(s) | 9, 282, 1241 |
| AlwI | GGATC | 3 cut(s) | 116, 863, 1092 |
| Ama87I | CYCGRG | 1 cut(s) | 1238 |
| AoxI | GGCC | 5 cut(s) | 331, 683, 1031, 1171, 1241 |
| ApeKI | GCWGC | 2 cut(s) | 182, 1190 |
| ApoI | RAATTY | 1 cut(s) | 341 |
| AseI | ATTAAT | 1 cut(s) | 297 |
| AsiGI | ACCGGT | 1 cut(s) | 1076 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 811 |
| AspS9I | GGNCC | 1 cut(s) | 1241 |
| AsuHPI | GGTGA | 7 cut(s) | 144, 413, 670, 774, 893, 1174, 1232 |
| AvaI | CYCGRG | 1 cut(s) | 1238 |
| BaeGI | GKGCMC | 1 cut(s) | 405 |
| BalI | TGGCCA | 2 cut(s) | 333, 1033 |
| BanI | GGYRCC | 1 cut(s) | 402 |
| BanII | GRGCYC | 3 cut(s) | 431, 523, 894 |
| BauI | CACGAG | 2 cut(s) | 485, 873 |
| BbsI | GAAGAC | 4 cut(s) | 95, 311, 828, 888 |
| Bbv12I | GWGCWC | 4 cut(s) | 289, 431, 523, 894 |
| BbvI | GCAGC | 2 cut(s) | 169, 1202 |
| BccI | CCATC | 6 cut(s) | 193, 455, 532, 1159, 1163, 1199 |
| BciT130I | CCWGG | 2 cut(s) | 282, 991 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcoDI | GTCTC | 3 cut(s) | 9, 282, 1241 |
| BfrI | CTTAAG | 1 cut(s) | 928 |
| BfuAI | ACCTGC | 1 cut(s) | 912 |
| BisI | GCNGC | 6 cut(s) | 183, 232, 244, 247, 250, 1191 |
| BlsI | GCNGC | 6 cut(s) | 184, 233, 245, 248, 251, 1192 |
| BmcAI | AGTACT | 1 cut(s) | 476 |
| Bme1390I | CCNGG | 2 cut(s) | 282, 991 |
| BmeT110I | CYCGRG | 1 cut(s) | 1238 |
| BmgT120I | GGNCC | 1 cut(s) | 1241 |
| BmiI | GGNNCC | 1 cut(s) | 404 |
| BmrFI | CCNGG | 2 cut(s) | 282, 991 |
| BpiI | GAAGAC | 4 cut(s) | 95, 311, 828, 888 |
| BpmI | CTGGAG | 1 cut(s) | 264 |
| Bpu10I | CCTNAGC | 1 cut(s) | 425 |
| BpuEI | CTTGAG | 1 cut(s) | 878 |
| Bsa29I | ATCGAT | 2 cut(s) | 111, 773 |
| BsaBI | GATNNNNATC | 1 cut(s) | 203 |
| BsaJI | CCNNGG | 2 cut(s) | 160, 699 |
| BsaWI | WCCGGW | 1 cut(s) | 1076 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 413, 443 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 161, 514, 1201 |
| Bse118I | RCCGGY | 1 cut(s) | 1076 |
| Bse1I | ACTGG | 3 cut(s) | 46, 410, 1136 |
| Bse8I | GATNNNNATC | 1 cut(s) | 203 |
| BseBI | CCWGG | 2 cut(s) | 282, 991 |
| BseCI | ATCGAT | 2 cut(s) | 111, 773 |
| BseDI | CCNNGG | 2 cut(s) | 160, 699 |
| BseGI | GGATG | 2 cut(s) | 1174, 1210 |
| BseJI | GATNNNNATC | 1 cut(s) | 203 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 161, 514, 1201 |
| BseMII | CTCAG | 8 cut(s) | 416, 485, 561, 740, 780, 852, 899, 995 |
| BseNI | ACTGG | 3 cut(s) | 46, 410, 1136 |
| BseRI | GAGGAG | 2 cut(s) | 750, 753 |
| BseSI | GKGCMC | 1 cut(s) | 405 |
| BseXI | GCAGC | 2 cut(s) | 169, 1202 |
| Bsh1285I | CGRYCG | 1 cut(s) | 773 |
| BshFI | GGCC | 5 cut(s) | 333, 685, 1033, 1173, 1243 |
| BshNI | GGYRCC | 1 cut(s) | 402 |
| BshTI | ACCGGT | 1 cut(s) | 1076 |
| BshVI | ATCGAT | 2 cut(s) | 111, 773 |
| BsiEI | CGRYCG | 1 cut(s) | 773 |
| BsiHKAI | GWGCWC | 4 cut(s) | 289, 431, 523, 894 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1238 |
| BsiSI | CCGG | 1 cut(s) | 1077 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 161, 514, 1201 |
| BsmAI | GTCTC | 3 cut(s) | 9, 282, 1241 |
| BsmBI | CGTCTC | 1 cut(s) | 1241 |
| BsmI | GAATGC | 1 cut(s) | 1192 |
| BsnI | GGCC | 5 cut(s) | 333, 685, 1033, 1173, 1243 |
| BsoBI | CYCGRG | 1 cut(s) | 1238 |
| Bsp1286I | GDGCHC | 5 cut(s) | 289, 405, 431, 523, 894 |
| Bsp19I | CCATGG | 1 cut(s) | 699 |
| BspACI | CCGC | 7 cut(s) | 23, 231, 234, 243, 246, 249, 1067 |
| BspANI | GGCC | 5 cut(s) | 333, 685, 1033, 1173, 1243 |
| BspCNI | CTCAG | 8 cut(s) | 417, 484, 560, 739, 781, 853, 900, 996 |
| BspDI | ATCGAT | 2 cut(s) | 111, 773 |
| BspHI | TCATGA | 1 cut(s) | 708 |
| BspLI | GGNNCC | 1 cut(s) | 404 |
| BspMI | ACCTGC | 1 cut(s) | 912 |
| BspPI | GGATC | 3 cut(s) | 116, 863, 1092 |
| BspT107I | GGYRCC | 1 cut(s) | 402 |
| BspTI | CTTAAG | 1 cut(s) | 928 |
| BsrFI | RCCGGY | 1 cut(s) | 1076 |
| BsrI | ACTGG | 3 cut(s) | 46, 410, 1136 |
| BssAI | RCCGGY | 1 cut(s) | 1076 |
| BssECI | CCNNGG | 2 cut(s) | 160, 699 |
| BssSI | CACGAG | 2 cut(s) | 485, 873 |
| BssT1I | CCWWGG | 2 cut(s) | 160, 699 |
| Bst2BI | CACGAG | 2 cut(s) | 485, 873 |
| Bst2UI | CCWGG | 2 cut(s) | 282, 991 |
| Bst4CI | ACNGT | 1 cut(s) | 1235 |
| Bst6I | CTCTTC | 3 cut(s) | 67, 771, 1118 |
| BstAFI | CTTAAG | 1 cut(s) | 928 |
| BstDEI | CTNAG | 8 cut(s) | 425, 471, 547, 726, 789, 861, 908, 1004 |
| BstDSI | CCRYGG | 1 cut(s) | 699 |
| BstF5I | GGATG | 2 cut(s) | 1174, 1210 |
| BstMAI | GTCTC | 3 cut(s) | 9, 282, 1241 |
| BstMCI | CGRYCG | 1 cut(s) | 773 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 240, 249, 255, 452, 461, 736, 1135 |
| BstNI | CCWGG | 2 cut(s) | 282, 991 |
| BstNSI | RCATGY | 2 cut(s) | 739, 1153 |
| BstSCI | CCNGG | 2 cut(s) | 280, 989 |
| BstSLI | GKGCMC | 1 cut(s) | 405 |
| BstV1I | GCAGC | 2 cut(s) | 169, 1202 |
| BstV2I | GAAGAC | 4 cut(s) | 95, 311, 828, 888 |
| Bsu15I | ATCGAT | 2 cut(s) | 111, 773 |
| BsuRI | GGCC | 5 cut(s) | 333, 685, 1033, 1173, 1243 |
| BsuTUI | ATCGAT | 2 cut(s) | 111, 773 |
| BtgI | CCRYGG | 1 cut(s) | 699 |
| BtgZI | GCGATG | 1 cut(s) | 445 |
| BtsCI | GGATG | 2 cut(s) | 1174, 1210 |
| BtsI | GCAGTG | 1 cut(s) | 259 |
| BtsIMutI | CAGTG | 3 cut(s) | 259, 269, 1129 |
| BveI | ACCTGC | 1 cut(s) | 912 |
| CciI | TCATGA | 1 cut(s) | 708 |
| Cfr10I | RCCGGY | 1 cut(s) | 1076 |
| Cfr13I | GGNCC | 1 cut(s) | 1241 |
| ClaI | ATCGAT | 2 cut(s) | 111, 773 |
| Csp6I | GTAC | 1 cut(s) | 475 |
| CspAI | ACCGGT | 1 cut(s) | 1076 |
| CviAII | CATG | 9 cut(s) | 329, 499, 634, 700, 709, 736, 1150, 1159, 1245 |
| CviQI | GTAC | 1 cut(s) | 475 |
| DdeI | CTNAG | 8 cut(s) | 425, 471, 547, 726, 789, 861, 908, 1004 |
| EaeI | YGGCCR | 2 cut(s) | 331, 1031 |
| Eam1104I | CTCTTC | 3 cut(s) | 67, 771, 1118 |
| EarI | CTCTTC | 3 cut(s) | 67, 771, 1118 |
| EciI | GGCGGA | 1 cut(s) | 1082 |
| Ecl136II | GAGCTC | 3 cut(s) | 429, 521, 892 |
| Eco130I | CCWWGG | 2 cut(s) | 160, 699 |
| Eco24I | GRGCYC | 3 cut(s) | 431, 523, 894 |
| Eco53kI | GAGCTC | 3 cut(s) | 429, 521, 892 |
| Eco57I | CTGAAG | 6 cut(s) | 570, 840, 873, 900, 959, 1125 |
| Eco88I | CYCGRG | 1 cut(s) | 1238 |
| EcoICRI | GAGCTC | 3 cut(s) | 429, 521, 892 |
| EcoRII | CCWGG | 2 cut(s) | 280, 989 |
| EcoT14I | CCWWGG | 2 cut(s) | 160, 699 |
| EcoT38I | GRGCYC | 3 cut(s) | 431, 523, 894 |
| ErhI | CCWWGG | 2 cut(s) | 160, 699 |
| Esp3I | CGTCTC | 1 cut(s) | 1241 |
| FaeI | CATG | 9 cut(s) | 332, 502, 637, 703, 712, 739, 1153, 1162, 1248 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 589, 621 |
| FatI | CATG | 9 cut(s) | 328, 498, 633, 699, 708, 735, 1149, 1158, 1244 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| FblI | GTMKAC | 1 cut(s) | 1073 |
| Fnu4HI | GCNGC | 6 cut(s) | 183, 232, 244, 247, 250, 1191 |
| FokI | GGATG | 2 cut(s) | 1181, 1217 |
| FriOI | GRGCYC | 3 cut(s) | 431, 523, 894 |
| Fsp4HI | GCNGC | 6 cut(s) | 183, 232, 244, 247, 250, 1191 |
| GluI | GCNGC | 6 cut(s) | 183, 232, 244, 247, 250, 1191 |
| GsuI | CTGGAG | 1 cut(s) | 264 |
| HaeIII | GGCC | 5 cut(s) | 333, 685, 1033, 1173, 1243 |
| HapII | CCGG | 1 cut(s) | 1077 |
| Hin1II | CATG | 9 cut(s) | 332, 502, 637, 703, 712, 739, 1153, 1162, 1248 |
| HindIII | AAGCTT | 1 cut(s) | 492 |
| HinfI | GANTC | 5 cut(s) | 204, 543, 898, 1046, 1070 |
| HpaII | CCGG | 1 cut(s) | 1077 |
| HphI | GGTGA | 7 cut(s) | 144, 413, 670, 774, 893, 1174, 1232 |
| Hpy166II | GTNNAC | 2 cut(s) | 1074, 1228 |
| Hpy188I | TCNGA | 8 cut(s) | 198, 529, 790, 820, 1045, 1051, 1089, 1144 |
| Hpy188III | TCNNGA | 7 cut(s) | 396, 588, 597, 668, 709, 895, 1003 |
| Hpy8I | GTNNAC | 2 cut(s) | 1074, 1228 |
| HpyAV | CCTTC | 5 cut(s) | 708, 797, 1048, 1050, 1149 |
| HpyCH4III | ACNGT | 1 cut(s) | 1235 |
| HpyCH4IV | ACGT | 1 cut(s) | 1224 |
| HpyCH4V | TGCA | 3 cut(s) | 185, 1153, 1190 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 240, 249, 255, 452, 461, 736, 1135 |
| HpyF3I | CTNAG | 8 cut(s) | 425, 471, 547, 726, 789, 861, 908, 1004 |
| HpySE526I | ACGT | 1 cut(s) | 1224 |
| Hsp92II | CATG | 9 cut(s) | 332, 502, 637, 703, 712, 739, 1153, 1162, 1248 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| LmnI | GCTCC | 7 cut(s) | 284, 434, 518, 526, 763, 1005, 1015 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 1202 |
| MaeII | ACGT | 1 cut(s) | 1224 |
| MaeIII | GTNAC | 2 cut(s) | 923, 1220 |
| MfeI | CAATTG | 1 cut(s) | 1102 |
| MhlI | GDGCHC | 5 cut(s) | 289, 405, 431, 523, 894 |
| MlsI | TGGCCA | 2 cut(s) | 333, 1033 |
| MluCI | AATT | 7 cut(s) | 169, 268, 294, 341, 807, 974, 1102 |
| MluNI | TGGCCA | 2 cut(s) | 333, 1033 |
| MlyI | GAGTC | 2 cut(s) | 537, 1079 |
| MmeI | TCCRAC | 1 cut(s) | 456 |
| Mox20I | TGGCCA | 2 cut(s) | 333, 1033 |
| MroXI | GAANNNNTTC | 1 cut(s) | 811 |
| MscI | TGGCCA | 2 cut(s) | 333, 1033 |
| MseI | TTAA | 3 cut(s) | 297, 732, 929 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1163 |
| Msp20I | TGGCCA | 2 cut(s) | 333, 1033 |
| MspCI | CTTAAG | 1 cut(s) | 928 |
| MspI | CCGG | 1 cut(s) | 1077 |
| MspR9I | CCNGG | 2 cut(s) | 282, 991 |
| MunI | CAATTG | 1 cut(s) | 1102 |
| Mva1269I | GAATGC | 1 cut(s) | 1192 |
| MvaI | CCWGG | 2 cut(s) | 282, 991 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 240, 249, 255, 452, 461, 736, 1135 |
| NcoI | CCATGG | 1 cut(s) | 699 |
| NlaIII | CATG | 9 cut(s) | 332, 502, 637, 703, 712, 739, 1153, 1162, 1248 |
| NlaIV | GGNNCC | 1 cut(s) | 404 |
| NmuCI | GTSAC | 1 cut(s) | 1220 |
| NspI | RCATGY | 2 cut(s) | 739, 1153 |
| PagI | TCATGA | 1 cut(s) | 708 |
| PaqCI | CACCTGC | 1 cut(s) | 912 |
| PctI | GAATGC | 1 cut(s) | 1192 |
| PdmI | GAANNNNTTC | 1 cut(s) | 811 |
| PfeI | GAWTC | 3 cut(s) | 204, 898, 1046 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 161, 514 |
| PfoI | TCCNGGA | 1 cut(s) | 280 |
| PinAI | ACCGGT | 1 cut(s) | 1076 |
| PkrI | GCNGC | 6 cut(s) | 184, 233, 245, 248, 251, 1192 |
| Ple19I | CGATCG | 1 cut(s) | 773 |
| PleI | GAGTC | 2 cut(s) | 537, 1078 |
| PpsI | GAGTC | 2 cut(s) | 537, 1078 |
| PshBI | ATTAAT | 1 cut(s) | 297 |
| Psp124BI | GAGCTC | 3 cut(s) | 431, 523, 894 |
| Psp6I | CCWGG | 2 cut(s) | 280, 989 |
| PspGI | CCWGG | 2 cut(s) | 280, 989 |
| PspN4I | GGNNCC | 1 cut(s) | 404 |
| PspPI | GGNCC | 1 cut(s) | 1241 |
| PvuI | CGATCG | 1 cut(s) | 773 |
| RsaI | GTAC | 1 cut(s) | 476 |
| RsaNI | GTAC | 1 cut(s) | 475 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1163 |
| SacI | GAGCTC | 3 cut(s) | 431, 523, 894 |
| SaqAI | TTAA | 3 cut(s) | 297, 732, 929 |
| SatI | GCNGC | 6 cut(s) | 183, 232, 244, 247, 250, 1191 |
| Sau96I | GGNCC | 1 cut(s) | 1241 |
| ScaI | AGTACT | 1 cut(s) | 476 |
| SchI | GAGTC | 2 cut(s) | 537, 1079 |
| ScrFI | CCNGG | 2 cut(s) | 282, 991 |
| SduI | GDGCHC | 5 cut(s) | 289, 405, 431, 523, 894 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1163 |
| SmlI | CTYRAG | 2 cut(s) | 893, 928 |
| SmoI | CTYRAG | 2 cut(s) | 893, 928 |
| Sse9I | AATT | 7 cut(s) | 169, 268, 294, 341, 807, 974, 1102 |
| SsiI | CCGC | 7 cut(s) | 23, 231, 234, 243, 246, 249, 1067 |
| SstI | GAGCTC | 3 cut(s) | 431, 523, 894 |
| StyD4I | CCNGG | 2 cut(s) | 280, 989 |
| StyI | CCWWGG | 2 cut(s) | 160, 699 |
| TaaI | ACNGT | 1 cut(s) | 1235 |
| TaiI | ACGT | 1 cut(s) | 1227 |
| TaqI | TCGA | 5 cut(s) | 111, 541, 624, 769, 773 |
| TaqII | GACCGA | 1 cut(s) | 323 |
| TasI | AATT | 7 cut(s) | 169, 268, 294, 341, 807, 974, 1102 |
| TatI | WGTACW | 1 cut(s) | 474 |
| TauI | GCSGC | 4 cut(s) | 234, 246, 249, 252 |
| TfiI | GAWTC | 3 cut(s) | 204, 898, 1046 |
| Tru1I | TTAA | 3 cut(s) | 297, 732, 929 |
| Tru9I | TTAA | 3 cut(s) | 297, 732, 929 |
| TscAI | CASTG | 3 cut(s) | 259, 269, 1136 |
| TseFI | GTSAC | 1 cut(s) | 1220 |
| TseI | GCWGC | 2 cut(s) | 182, 1190 |
| Tsp45I | GTSAC | 1 cut(s) | 1220 |
| TspDTI | ATGAA | 9 cut(s) | 206, 335, 381, 407, 622, 697, 804, 1099, 1147 |
| TspRI | CASTG | 3 cut(s) | 259, 269, 1136 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 161, 514 |
| Vha464I | CTTAAG | 1 cut(s) | 928 |
| VspI | ATTAAT | 1 cut(s) | 297 |
| XapI | RAATTY | 1 cut(s) | 341 |
| XceI | RCATGY | 2 cut(s) | 739, 1153 |
| XmiI | GTMKAC | 1 cut(s) | 1073 |
| XmnI | GAANNNNTTC | 1 cut(s) | 811 |
| ZrmI | AGTACT | 1 cut(s) | 476 |