Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0009243

Physical Location & Seq

Genomic Coordinates Forward (+)

52479021 .. 52486678

Gene Structure 7658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0378700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCTTCCGCCGTCGTCACCGAGCCTAATCTCCAGAGAAACCTCCACCTCCTCTCCGCCGAACAGGTGGAGCTGGCGAAGGTGCTGGTGGAGATGGGGCAGACTCACCTGTTCGAGCATTGGGCCGAGCCGGGCGTCGACGATGACGACGAAAAGAAAGCCTTTTTTGATCAGGTGAGTCGGCTCAATTCAAGCTATCCAGGGGGTTTGGCATCATATATCAAAACTGCTAGAGAACTGTTAGCGGATTCAAAAGCCGGAAAGAATCCATTTGATGGCTTTACTCCTTCCGTTCCAACAGGTGAAACCTTGACTTTTGGTGATGATAGCTTTATGAGTTTTGAGGAGACTGGTGTCAAAGAAGTTCGGAAAGCTGCATTTGTTCTTGTTGCTGGAGGACTTGGGGAACGTCTGGGATACAACGGAATTAAGGTTGCTCTTCCCAGAGAGACGACCACAGGAGCGTGTTTTTTACAACATTATATCGAGACAATATTGGCTCTTCAAGATGCTAGCTGTCAACTCGCAGAAGGTGAATGCCAAACAAAAATTCCTCTGGTTATAATGACATCAGATGACACACATTCTCGTACAGTAGAGCTTTTAGAGTCAAATTCTTATTTTGGAATGGAACCTAATCAAGTAAAGCTTCTAAAGCAGGAAAAAGTTGCATGCTTAGATGATAATGATGCGAGGCTTGCAATAGACCCACGTAACAAGTACAGGATTCAGACCAAACCTCATGGACATGGTGATGTGCATTCACTACTCTACTCTAGTGGCCTCCTCACTGAATGGCGTGACGCTGGTTTAAGTTGGGTTCTGTTCTTCCAAGATACAAATGGACTTCTGTTCAATGCAATTCCAGCATCATTGGGTGTTAGTGCTACAAGACAGTACCATGTTAACTCCCTAGCTGTTCCACGCAAAGCAAAAGAAGCAATTGGAGGAATTACCCGACTTACTCATGCTGATGGGAGATCAATGGTGATCAATGTGGAGTACAACCAGCTTGATCCACTGCTTAGAGCAACTGGATTTCCTGACGGTGATGTCAACTGTGAGACTGGCTATTCTCCTTTCCCTGGGAATATCAACCAATTAATCTTGGAACTTGGTCCGTACATTGAGGAGCTCACAAAAACAGGAGGTGCCATACAGGAGTTTGTTAACCCAAAATACAAAGATGCTAGTAAGACTTCATTTAAGTCCTCAACTCGGTTAGAGTGTATGATGCAAGACTATCCAAAAACTTTGCCTCCATCAGCTAGGGTGGGATTCACAGTAATGGAGCCATGGCTTGCTTATGCACCTGTTAAGAACAACCCTGAGGATGCTGCTAAGGTACCAAAGGGAAATCCATATCATAGTGCAACTTCTGGAGAAATGTTGGTTTATCGTGCAAACAGTCTCATTCTCAGAGAGGCTGGAGTCCAAGTAGCTGATCCAGTACAACAGGTGTTCAACGGTCAAGAAATTGAAGTGTGGCCTCGTGTCACATGGAAACCAAAATGGGCGGTCACTTTTAAAGAAGTAAAAAACAAAGTCAGTGGAAGTAGCTCAATTTCTCAGAGGTCTACATTGGTTATTAAGGGCCGTAATATATTTGTCAAGGATCTCTGCTTGGATGGGGCACTTGTTATCGATGTTGCTGATGATAAAGAGGTAAAAGTGGAAGGTTCGGTACAGAATAAAGGCTGGATCCTTGAAAATGTTGATTACAAAGATACTTCAGTACCTGAGGAACTGAGGATAAGGGGTTTCAGAATCAACAAGATTGAACAATTGGTAAAGTCTGAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0003002 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009888 GO:0009889 GO:0009987 GO:0010051 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045165 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELK Homeobox_KN KNOX1 KNOX2

Protein Analysis

601

Amino Acids

66.45

Weight (kDa)

5.5

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGP	PF01704	115 - 274	8.9e-16	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08150
fragaria_vesca	FvH4_2g32400 FvH4_2g32400
malus_domestica	MD08G1075200.v1.1 MD15G1062700.v1.1
prunus_persica	Prupe.1G416700_v2.0.a1 Prupe.1G416700_v2.0.a1
pyrus_communis	pycom08g06220 pycom15g05940
rosa_chinensis	RchiOBHm_Chr6g0310301
rosa_laevigata	RLG00000010493
rosa_multiflora	Rmu_sc0002348.1_g000017
rosa_roxburghii	Rroxscaffold_7G00158680
rosa_rugosa	Rorug06G0378500 Rorug06G0378500 Rorug06G0378600 Rorug06G0378700
rosa_samantha	Rh6AG493000 Rh6BG502600 Rh6CG507600 Rh6DG493700
rosa_wichuraiana	Rw6G042900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	563
AasI	GACNNNNNNGTC	1 cut(s)	1052
Acc65I	GGTACC	1 cut(s)	1345
AccB1I	GGYRCC	2 cut(s)	1151, 1345
AccB7I	CCANNNNNTGG	1 cut(s)	275
AccI	GTMKAC	2 cut(s)	138, 1577
AciI	CCGC	4 cut(s)	9, 57, 245, 1517
AclWI	GGATC	5 cut(s)	1010, 1439, 1623, 1696, 1709
AcsI	RAATTY	2 cut(s)	549, 613
AcuI	CTGAAG	1 cut(s)	1716
AcyI	GRCGYC	1 cut(s)	135
AfaI	GTAC	9 cut(s)	592, 722, 899, 1004, 1124, 1347, 1452, 1686, 1737
AfiI	CCNNNNNNNGG	3 cut(s)	275, 1085, 1218
AgsI	TTSAA	8 cut(s)	192, 252, 506, 856, 1465, 1481, 1709, 1781
AjnI	CCWGG	2 cut(s)	199, 1084
AjuI	GAANNNNNNNTTGG	2 cut(s)	534, 566
Alw21I	GWGCWC	1 cut(s)	1137
Alw26I	GTCTC	5 cut(s)	341, 443, 482, 1058, 1415
AlwI	GGATC	5 cut(s)	1010, 1439, 1623, 1696, 1709
AlwNI	CAGNNNCTG	1 cut(s)	1739
AoxI	GGCC	4 cut(s)	123, 781, 1487, 1594
ApeKI	GCWGC	2 cut(s)	374, 1337
ApoI	RAATTY	2 cut(s)	549, 613
AseI	ATTAAT	1 cut(s)	1103
Asp718I	GGTACC	1 cut(s)	1345
AspS9I	GGNCC	3 cut(s)	123, 1118, 1594
AsuC2I	CCSGG	1 cut(s)	132
AsuHPI	GGTGA	9 cut(s)	10, 98, 187, 314, 332, 545, 764, 1000, 1061
AsuNHI	GCTAGC	1 cut(s)	512
AvaII	GGWCC	1 cut(s)	1118
AxyI	CCTNAGG	2 cut(s)	1329, 1740
BaeGI	GKGCMC	1 cut(s)	1636
BaeI	ACNNNNGTAYC	4 cut(s)	1719, 1719, 1752, 1752
BamHI	GGATCC	1 cut(s)	1701
BanI	GGYRCC	2 cut(s)	1151, 1345
BanII	GRGCYC	1 cut(s)	1137
BarI	GAAGNNNNNNTAC	2 cut(s)	1668, 1700
BauI	CACGAG	1 cut(s)	1491
Bbv12I	GWGCWC	1 cut(s)	1137
BbvI	GCAGC	2 cut(s)	361, 1324
BccI	CCATC	5 cut(s)	88, 269, 968, 1270, 1622
BceAI	ACGGC	1 cut(s)	1581
BciT130I	CCWGG	2 cut(s)	201, 1086
BciVI	GTATCC	1 cut(s)	410
BclI	TGATCA	2 cut(s)	169, 990
BcnI	CCSGG	1 cut(s)	132
BcoDI	GTCTC	5 cut(s)	341, 443, 482, 1058, 1415
BfaI	CTAG	6 cut(s)	231, 513, 777, 914, 1191, 1269
BfuI	GTATCC	1 cut(s)	410
BisI	GCNGC	2 cut(s)	375, 1338
BlsI	GCNGC	2 cut(s)	376, 1339
Bme1390I	CCNGG	3 cut(s)	132, 201, 1086
Bme18I	GGWCC	1 cut(s)	1118
BmgT120I	GGNCC	3 cut(s)	123, 1118, 1594
BmiI	GGNNCC	5 cut(s)	633, 1153, 1293, 1347, 1703
BmrFI	CCNGG	3 cut(s)	132, 201, 1086
BmsI	GCATC	7 cut(s)	221, 499, 679, 878, 1177, 1224, 1324
BmtI	GCTAGC	1 cut(s)	516
BoxI	GACNNNNGTC	1 cut(s)	353
BpmI	CTGGAG	4 cut(s)	17, 414, 1401, 1449
Bpu10I	CCTNAGC	1 cut(s)	1341
BpuMI	CCSGG	1 cut(s)	132
Bsa29I	ATCGAT	1 cut(s)	1644
BsaAI	YACGTR	1 cut(s)	713
BsaHI	GRCGYC	1 cut(s)	135
BsaJI	CCNNGG	4 cut(s)	200, 1084, 1085, 1295
BsaXI	ACNNNNNCTCC	6 cut(s)	38, 68, 1243, 1273, 1422, 1452
Bsc4I	CCNNNNNNNGG	3 cut(s)	275, 1085, 1218
Bse1I	ACTGG	4 cut(s)	355, 1039, 1072, 1448
Bse21I	CCTNAGG	2 cut(s)	1329, 1740
BseBI	CCWGG	2 cut(s)	201, 1086
BseCI	ATCGAT	1 cut(s)	1644
BseDI	CCNNGG	4 cut(s)	200, 1084, 1085, 1295
BseGI	GGATG	2 cut(s)	1339, 1633
BseLI	CCNNNNNNNGG	3 cut(s)	275, 1085, 1218
BseMII	CTCAG	6 cut(s)	1320, 1432, 1583, 1731, 1739, 1788
BseNI	ACTGG	4 cut(s)	355, 1039, 1072, 1448
BseRI	GAGGAG	4 cut(s)	41, 359, 776, 1145
BseSI	GKGCMC	1 cut(s)	1636
BseXI	GCAGC	2 cut(s)	361, 1324
BshFI	GGCC	4 cut(s)	125, 783, 1489, 1596
BshNI	GGYRCC	2 cut(s)	1151, 1345
BshVI	ATCGAT	1 cut(s)	1644
BsiHKAI	GWGCWC	1 cut(s)	1137
BsiSI	CCGG	2 cut(s)	131, 258
BslI	CCNNNNNNNGG	3 cut(s)	275, 1085, 1218
BsmAI	GTCTC	5 cut(s)	341, 443, 482, 1058, 1415
BsmBI	CGTCTC	1 cut(s)	443
BsmI	GAATGC	2 cut(s)	542, 760
BsnI	GGCC	4 cut(s)	125, 783, 1489, 1596
Bsp1286I	GDGCHC	2 cut(s)	1137, 1636
Bsp143I	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
Bsp19I	CCATGG	1 cut(s)	1295
BspACI	CCGC	4 cut(s)	9, 57, 245, 1517
BspANI	GGCC	4 cut(s)	125, 783, 1489, 1596
BspCNI	CTCAG	6 cut(s)	1321, 1431, 1582, 1732, 1740, 1789
BspDI	ATCGAT	1 cut(s)	1644
BspLI	GGNNCC	5 cut(s)	633, 1153, 1293, 1347, 1703
BspOI	GCTAGC	1 cut(s)	516
BspPI	GGATC	5 cut(s)	1010, 1439, 1623, 1696, 1709
BspQI	GCTCTTC	2 cut(s)	444, 507
BspT107I	GGYRCC	2 cut(s)	1151, 1345
BsrI	ACTGG	4 cut(s)	355, 1039, 1072, 1448
BssECI	CCNNGG	4 cut(s)	200, 1084, 1085, 1295
BssMI	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	1491
BssT1I	CCWWGG	1 cut(s)	1295
Bst2BI	CACGAG	1 cut(s)	1491
Bst2UI	CCWGG	2 cut(s)	201, 1086
Bst4CI	ACNGT	8 cut(s)	240, 595, 897, 1049, 1061, 1285, 1409, 1469
Bst6I	CTCTTC	2 cut(s)	444, 507
BstACI	GRCGYC	1 cut(s)	135
BstBAI	YACGTR	1 cut(s)	713
BstC8I	GCNNGC	5 cut(s)	75, 514, 673, 699, 1302
BstDEI	CTNAG	9 cut(s)	676, 1025, 1329, 1341, 1418, 1569, 1740, 1748, 1797
BstDSI	CCRYGG	1 cut(s)	1295
BstF5I	GGATG	2 cut(s)	1339, 1633
BstKTI	GATC	7 cut(s)	172, 983, 993, 1018, 1447, 1618, 1704
BstMAI	GTCTC	5 cut(s)	341, 443, 482, 1058, 1415
BstMBI	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
BstMWI	GCNNNNNNNGC	4 cut(s)	655, 698, 866, 938
BstNI	CCWGG	2 cut(s)	201, 1086
BstNSI	RCATGY	1 cut(s)	675
BstPAI	GACNNNNGTC	1 cut(s)	353
BstSCI	CCNGG	3 cut(s)	130, 199, 1084
BstSLI	GKGCMC	1 cut(s)	1636
BstV1I	GCAGC	2 cut(s)	361, 1324
BstX2I	RGATCY	2 cut(s)	1615, 1701
BstYI	RGATCY	2 cut(s)	1615, 1701
Bsu15I	ATCGAT	1 cut(s)	1644
Bsu36I	CCTNAGG	2 cut(s)	1329, 1740
BsuI	GTATCC	1 cut(s)	410
BsuRI	GGCC	4 cut(s)	125, 783, 1489, 1596
BsuTUI	ATCGAT	1 cut(s)	1644
BtgI	CCRYGG	1 cut(s)	1295
BtsCI	GGATG	2 cut(s)	1339, 1633
BtsI	GCAGTG	1 cut(s)	1019
BtsIMutI	CAGTG	3 cut(s)	789, 1019, 1555
Cac8I	GCNNGC	5 cut(s)	75, 514, 673, 699, 1302
CaiI	CAGNNNCTG	1 cut(s)	1739
Cfr13I	GGNCC	3 cut(s)	123, 1118, 1594
ClaI	ATCGAT	1 cut(s)	1644
CseI	GACGC	2 cut(s)	124, 812
Csp6I	GTAC	9 cut(s)	591, 721, 898, 1003, 1123, 1346, 1451, 1685, 1736
CspCI	CAANNNNNGTGG	2 cut(s)	1531, 1566
CviAII	CATG	7 cut(s)	672, 743, 749, 902, 968, 1296, 1500
CviQI	GTAC	9 cut(s)	591, 721, 898, 1003, 1123, 1346, 1451, 1685, 1736
DdeI	CTNAG	9 cut(s)	676, 1025, 1329, 1341, 1418, 1569, 1740, 1748, 1797
DpnI	GATC	7 cut(s)	171, 982, 992, 1017, 1446, 1617, 1703
DpnII	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
DraI	TTTAAA	1 cut(s)	1528
DrdI	GACNNNNNNGTC	1 cut(s)	1052
DseDI	GACNNNNNNGTC	1 cut(s)	1052
Eam1104I	CTCTTC	2 cut(s)	444, 507
EarI	CTCTTC	2 cut(s)	444, 507
EciI	GGCGGA	1 cut(s)	46
Ecl136II	GAGCTC	1 cut(s)	1135
Eco130I	CCWWGG	1 cut(s)	1295
Eco24I	GRGCYC	1 cut(s)	1137
Eco47I	GGWCC	1 cut(s)	1118
Eco53kI	GAGCTC	1 cut(s)	1135
Eco57I	CTGAAG	1 cut(s)	1716
Eco81I	CCTNAGG	2 cut(s)	1329, 1740
EcoICRI	GAGCTC	1 cut(s)	1135
EcoRII	CCWGG	2 cut(s)	199, 1084
EcoT14I	CCWWGG	1 cut(s)	1295
EcoT38I	GRGCYC	1 cut(s)	1137
ErhI	CCWWGG	1 cut(s)	1295
Esp3I	CGTCTC	1 cut(s)	443
FaeI	CATG	7 cut(s)	675, 746, 752, 905, 971, 1299, 1503
FalI	AAGNNNNNCTT	4 cut(s)	146, 178, 633, 665
FatI	CATG	7 cut(s)	671, 742, 748, 901, 967, 1295, 1499
FbaI	TGATCA	2 cut(s)	169, 990
FblI	GTMKAC	2 cut(s)	138, 1577
Fnu4HI	GCNGC	2 cut(s)	375, 1338
FokI	GGATG	2 cut(s)	1346, 1640
FriOI	GRGCYC	1 cut(s)	1137
Fsp4HI	GCNGC	2 cut(s)	375, 1338
FspBI	CTAG	6 cut(s)	231, 513, 777, 914, 1191, 1269
GluI	GCNGC	2 cut(s)	375, 1338
GsuI	CTGGAG	4 cut(s)	17, 414, 1401, 1449
HaeIII	GGCC	4 cut(s)	125, 783, 1489, 1596
HapII	CCGG	2 cut(s)	131, 258
HgaI	GACGC	2 cut(s)	124, 812
Hin1I	GRCGYC	1 cut(s)	135
Hin1II	CATG	7 cut(s)	675, 746, 752, 905, 971, 1299, 1503
HincII	GTYRAC	5 cut(s)	139, 521, 907, 1057, 1171
HindII	GTYRAC	5 cut(s)	139, 521, 907, 1057, 1171
HindIII	AAGCTT	1 cut(s)	647
HinfI	GANTC	9 cut(s)	103, 178, 248, 265, 608, 727, 1278, 1431, 1767
HpaI	GTTAAC	2 cut(s)	907, 1171
HpaII	CCGG	2 cut(s)	131, 258
HphI	GGTGA	9 cut(s)	10, 98, 187, 314, 332, 545, 764, 1000, 1061
Hpy166II	GTNNAC	6 cut(s)	139, 521, 907, 1057, 1171, 1578
Hpy188I	TCNGA	7 cut(s)	369, 574, 732, 1421, 1572, 1766, 1798
Hpy188III	TCNNGA	6 cut(s)	34, 487, 506, 1043, 1380, 1472
Hpy8I	GTNNAC	6 cut(s)	139, 521, 907, 1057, 1171, 1578
Hpy99I	CGWCG	4 cut(s)	17, 140, 143, 152
HpyAV	CCTTC	4 cut(s)	73, 297, 524, 1670
HpyCH4III	ACNGT	8 cut(s)	240, 595, 897, 1049, 1061, 1285, 1409, 1469
HpyCH4IV	ACGT	2 cut(s)	409, 712
HpyCH4V	TGCA	9 cut(s)	377, 671, 701, 760, 860, 1237, 1310, 1373, 1403
HpyF10VI	GCNNNNNNNGC	4 cut(s)	655, 698, 866, 938
HpyF3I	CTNAG	9 cut(s)	676, 1025, 1329, 1341, 1418, 1569, 1740, 1748, 1797
HpySE526I	ACGT	2 cut(s)	409, 712
Hsp92I	GRCGYC	1 cut(s)	135
Hsp92II	CATG	7 cut(s)	675, 746, 752, 905, 971, 1299, 1503
KpnI	GGTACC	1 cut(s)	1349
Ksp22I	TGATCA	2 cut(s)	169, 990
KspAI	GTTAAC	2 cut(s)	907, 1171
Kzo9I	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
LguI	GCTCTTC	2 cut(s)	444, 507
LmnI	GCTCC	4 cut(s)	70, 461, 1132, 1291
Lsp1109I	GCAGC	2 cut(s)	361, 1324
LweI	GCATC	7 cut(s)	221, 499, 679, 878, 1177, 1224, 1324
MaeI	CTAG	6 cut(s)	231, 513, 777, 914, 1191, 1269
MaeII	ACGT	2 cut(s)	409, 712
MaeIII	GTNAC	5 cut(s)	16, 713, 800, 1495, 1519
MalI	GATC	7 cut(s)	171, 982, 992, 1017, 1446, 1617, 1703
MboI	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
MboII	GAAGA	3 cut(s)	431, 494, 820
MfeI	CAATTG	2 cut(s)	942, 1784
MflI	RGATCY	2 cut(s)	1615, 1701
MhlI	GDGCHC	2 cut(s)	1137, 1636
MlyI	GAGTC	4 cut(s)	97, 187, 617, 1440
MmeI	TCCRAC	1 cut(s)	320
MseI	TTAA	9 cut(s)	429, 812, 906, 1103, 1170, 1206, 1317, 1527, 1590
MslI	CAYNNNNRTG	4 cut(s)	747, 753, 972, 1286
MspI	CCGG	2 cut(s)	131, 258
MspR9I	CCNGG	3 cut(s)	132, 201, 1086
MunI	CAATTG	2 cut(s)	942, 1784
Mva1269I	GAATGC	2 cut(s)	542, 760
MvaI	CCWGG	2 cut(s)	201, 1086
MwoI	GCNNNNNNNGC	4 cut(s)	655, 698, 866, 938
NciI	CCSGG	1 cut(s)	132
NcoI	CCATGG	1 cut(s)	1295
NdeII	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
NheI	GCTAGC	1 cut(s)	512
NlaIII	CATG	7 cut(s)	675, 746, 752, 905, 971, 1299, 1503
NlaIV	GGNNCC	5 cut(s)	633, 1153, 1293, 1347, 1703
NmeAIII	GCCGAG	1 cut(s)	151
NmuCI	GTSAC	4 cut(s)	16, 800, 1495, 1519
NspI	RCATGY	1 cut(s)	675
PaeI	GCATGC	1 cut(s)	675
PasI	CCCWGGG	1 cut(s)	1085
PciSI	GCTCTTC	2 cut(s)	444, 507
PcsI	WCGNNNNNNNCGW	2 cut(s)	144, 147
PctI	GAATGC	2 cut(s)	542, 760
PfeI	GAWTC	5 cut(s)	248, 265, 727, 1278, 1767
PflMI	CCANNNNNTGG	1 cut(s)	275
PkrI	GCNGC	2 cut(s)	376, 1339
PleI	GAGTC	4 cut(s)	97, 186, 616, 1439
PpsI	GAGTC	4 cut(s)	97, 186, 616, 1439
Ppu21I	YACGTR	1 cut(s)	713
PshAI	GACNNNNGTC	1 cut(s)	353
PshBI	ATTAAT	1 cut(s)	1103
PsiI	TTATAA	1 cut(s)	563
Psp124BI	GAGCTC	1 cut(s)	1137
Psp6I	CCWGG	2 cut(s)	199, 1084
PspGI	CCWGG	2 cut(s)	199, 1084
PspN4I	GGNNCC	5 cut(s)	633, 1153, 1293, 1347, 1703
PspPI	GGNCC	3 cut(s)	123, 1118, 1594
PstNI	CAGNNNCTG	1 cut(s)	1739
PsuI	RGATCY	2 cut(s)	1615, 1701
RsaI	GTAC	9 cut(s)	592, 722, 899, 1004, 1124, 1347, 1452, 1686, 1737
RsaNI	GTAC	9 cut(s)	591, 721, 898, 1003, 1123, 1346, 1451, 1685, 1736
RseI	CAYNNNNRTG	4 cut(s)	747, 753, 972, 1286
SacI	GAGCTC	1 cut(s)	1137
SalI	GTCGAC	1 cut(s)	137
SapI	GCTCTTC	2 cut(s)	444, 507
SaqAI	TTAA	9 cut(s)	429, 812, 906, 1103, 1170, 1206, 1317, 1527, 1590
SatI	GCNGC	2 cut(s)	375, 1338
Sau3AI	GATC	7 cut(s)	169, 980, 990, 1015, 1444, 1615, 1701
Sau96I	GGNCC	3 cut(s)	123, 1118, 1594
SchI	GAGTC	4 cut(s)	97, 187, 617, 1440
ScrFI	CCNGG	3 cut(s)	132, 201, 1086
SduI	GDGCHC	2 cut(s)	1137, 1636
SfaNI	GCATC	7 cut(s)	221, 499, 679, 878, 1177, 1224, 1324
SgrDI	CGTCGACG	1 cut(s)	137
SinI	GGWCC	1 cut(s)	1118
SmiMI	CAYNNNNRTG	4 cut(s)	747, 753, 972, 1286
SphI	GCATGC	1 cut(s)	675
SsiI	CCGC	4 cut(s)	9, 57, 245, 1517
SspI	AATATT	1 cut(s)	495
SspMI	CTAG	6 cut(s)	231, 513, 777, 914, 1191, 1269
SstI	GAGCTC	1 cut(s)	1137
StyD4I	CCNGG	3 cut(s)	130, 199, 1084
StyI	CCWWGG	1 cut(s)	1295
TaaI	ACNGT	8 cut(s)	240, 595, 897, 1049, 1061, 1285, 1409, 1469
TaiI	ACGT	2 cut(s)	412, 715
TaqI	TCGA	4 cut(s)	114, 138, 486, 1644
TatI	WGTACW	3 cut(s)	720, 1002, 1450
TfiI	GAWTC	5 cut(s)	248, 265, 727, 1278, 1767
Tru1I	TTAA	9 cut(s)	429, 812, 906, 1103, 1170, 1206, 1317, 1527, 1590
Tru9I	TTAA	9 cut(s)	429, 812, 906, 1103, 1170, 1206, 1317, 1527, 1590
TscAI	CASTG	3 cut(s)	796, 1026, 1555
TseFI	GTSAC	4 cut(s)	16, 800, 1495, 1519
TseI	GCWGC	2 cut(s)	374, 1337
Tsp45I	GTSAC	4 cut(s)	16, 800, 1495, 1519
TspDTI	ATGAA	1 cut(s)	1191
TspGWI	ACGGA	3 cut(s)	280, 438, 1110
TspRI	CASTG	3 cut(s)	796, 1026, 1555
Van91I	CCANNNNNTGG	1 cut(s)	275
VpaK11BI	GGWCC	1 cut(s)	1118
VspI	ATTAAT	1 cut(s)	1103
XapI	RAATTY	2 cut(s)	549, 613
XceI	RCATGY	1 cut(s)	675
XcmI	CCANNNNNNNNNTGG	1 cut(s)	839
XmiI	GTMKAC	2 cut(s)	138, 1577
XspI	CTAG	6 cut(s)	231, 513, 777, 914, 1191, 1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.