pycom08g17950

von Willebrand factor type A domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0014171
Physical Location & Seq
Reverse (-)
18127038 .. 18129386
2349 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2241 bp
ATGGCAACTGGTTGGAGGCGAGCTTTTTGCACTACAATCCCTCGAGATCCAGCCGATGAATCCATACTCTCTGAAAAGATAAGCCCCAGCTCAAGTCCCACTCCCAGAAGCTGCACCAGGCTTGGCTTTTTCTCCGGTGGCAGTAACCCTTCTACCCCGAGATTGCAAACCCAGCAGCCCCAGCAGCAAACCCAGGTTGGCGACCATGAAAATCCCAGAAAACTTGAGTGCAAAACCACTACTCCAAAGAGTAGTAGAACGTCGTTTCTCTCGAGCTCCAACCCGACTTCTCCTCGATCCCCTCTCAAGCTCTCCCTCTTCCGTAACAGCTTCAAGTTTCGAAGTAGCTGCGGGATATGCCTGAACAGCGTCAAGACTGGCCAAGGCACCGCCATTTACACGGCGGAGTGCGGCCACGCCTTTCACTTCCCTTGCATAGCTGCCCATGTCCGCAGCCATGGCATCCTTGTCTGCCCCGTCTGCAACTCCACCTGGAAAGACGTCCCTCTCCTCGCCATCCACCAGAACCTCAACAACAACGCCCAGAACGACGTTGTCCGAAGTCAAACCACCCCAAAGCAGAAACCCAAATCCAAGCCAGCCGAAGTCGAGAAGAAGATAATAATGGAGTCCACGCCACCACCCAGAGCCTCGTCCAAGCCATTGTACGACGACGACGAGTCTCTTCTCTCTACAACGTCTCGGATCATCCCCATCCCGGAAGCCGACGACGAGGAGGACGAAGATGACACCGTCGCATACCCCGAGACCGACGACGTCCAAGAGTTCCAGGGCTTTTTCGTCAATCCAAACTCTTCATCTTCCGATGCTCAGATCAACGGCAGAGATTTTAGAACCAATAATAATGTTCAGGTGCGGATTTTGCCCGAATCCGCTTTGCTCTCTTCGGGTCGGGGCTCCGACACTTATGCCGTGGCGTTGAGGGTGAAGGCTCCGCCTCCGTCGATTTTAAACCCGTCGCACCGTGCACCGGTCGATTTGGTGGCAGTGCTCGACGTCAGCGGAAGCATGACCGGCGCCAAACTCCAGATGCTGAAACGCGCCATGCGTTTGGTCATTTTGTCGCTCGGCTCCAACGACAGACTTTCGATTGTTGCTTTCTCGGCTACGACGAAACGGTTGTTGCCGTTGAGGAGAATGACGGCTTACGGTCAACGTTTGGCTAGAAGAGTCGTTGACCGGCTTGCGTGCGGTCAGGGTTCGAGTGTGGGTGATGCCTTGAGGAAGGCGACAAAAGTGCTTGAAGATCGGAGGGAGAAGAATCCGGTTGCCAGTATCATGCTCTTATCGGACGGTCAGGATAGGGCAAAAAATTCGGGCAATCACCGTCAAGGTTCCGGCCACGTGTCGTCCACCCGCTTTGCTCACATTGAGATCCCGGTTCATGCCTTCGGGTTCGGCGAAACCGGCGGCTTTAACCAGGAGCCGGCTGAGGACGCGTTTGCCAAATGCGTTGGGGGATTGCTGAGTGTGGTTGTCCAGGACTTAAGAATTCAGCTGGGCTTCGATTCCGGCTCGGCTCCCGCTGAGATATCCGCCATCTATTCGTGCAATGGTGGGCCAGCAGTGCACGGCTCAGCTTCTGTTCGGCTCGGCGACTTGTACGCCGAGGAGGAGCGGGAGCTGCTGGTAGAGTTGCGGGTTCCTCGCTCACTAGGAGTTCGTGGATCCCGACACGTAATGTCCGTCCGGTGTCTCTACAAGGATCCTGCAACTCAAGAGATTGTGTATGGTAAAGAACAGGCACTTTTCGTGCCTCTCACGGATACCGTGAGATCGTCTACGGGCCCGAAGATCGAACGGCTGAGAGGGCTGTTTATTACAATACGCGCGGTAGCCGAGTCGCGGAGATTGGTTGAGCACAATGACTACTCTAGTGCGCATCATTTGCTTTCATCGGCTCGGGCTCTGCTTATGAAATCCGGCTCAGTATCAGCTGACGAGTACGTGCGCGGCCTGGAAGCCGAGCTCTCAGAGCTGCATTGGAGAAGGCAGCACAAGATCATGGAGGAGCAGCAGCAGATGATGATGAAGATCCAACGGCGGAGAGGCGGTGTGGAAATGGACGTGGCGGCGACCGCTGTAGTGGATGAAAACGGGGAGCCGCTTACACCGAGTTCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGGTGGCCATCATGAAGAAGTCGCTGAATAGAGTGAGCGACTTGCACGGCTTTGAAAATGCTAGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA_2 zf-RING_11 zf-RING_2

Protein Analysis

747

Amino Acids

81.74

Weight (kDa)

9.14

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 116 - 162 7e-09 Ring finger domain
zf-RING_11 PF17123 117 - 146 1.2e-08 RING-like zinc finger
zf-C3HC4 PF00097 117 - 161 1e-06 Zinc finger, C3HC4 type (RING finger)
VWA_CoxE PF05762 325 - 458 9.4e-06 VWA domain containing CoxE-like protein
VWA PF00092 333 - 473 4.7e-13 von Willebrand factor type A domain
VWA_3 PF13768 333 - 476 1e-11 von Willebrand factor type A domain
VWA_2 PF13519 334 - 440 3.8e-18 von Willebrand factor type A domain
WAV3_C PF25243 604 - 675 7.1e-37 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014171)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49665
fragaria_vesca FvH4_5g33780 FvH4_5g33780
malus_domestica MD08G1207200.v1.1 MD15G1391600.v1.1
prunus_persica Prupe.1G540900_v2.0.a1
pyrus_communis pycom08g17950
rosa_chinensis RchiOBHm_Chr7g0233091
rosa_laevigata RLG00000001300
rosa_multiflora Rmu_sc0016344.1_g000006
rosa_roxburghii Rroxscaffold_3G00227690
rosa_rugosa Rorug07G0278100
rosa_samantha Rh7AG433300 Rh7BG406100 Rh7CG452700 Rh7DG421900
rosa_wichuraiana Rw7G035730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 504, 780, 1020
Acc16I TGCGCA 1 cut(s) 1902
AccB1I GGYRCC 2 cut(s) 386, 1037
AccBSI CCGCTC 2 cut(s) 1639, 2153
AccI GTMKAC 1 cut(s) 1802
AccII CGCG 6 cut(s) 1062, 1460, 1851, 1853, 1867, 1974
AclI AACGTT 1 cut(s) 1177
AclWI GGATC 9 cut(s) 41, 291, 713, 1390, 1683, 1696, 1721, 1734, 2050
AcoI YGGCCR 4 cut(s) 379, 412, 1360, 2175
AcsI RAATTY 2 cut(s) 1333, 1512
AcvI CACGTG 1 cut(s) 1366
AcyI GRCGYC 4 cut(s) 501, 777, 1017, 1038
AfaI GTAC 3 cut(s) 668, 1625, 1967
AfiI CCNNNNNNNGG 4 cut(s) 718, 991, 1447, 1866
AflII CTTAAG 1 cut(s) 1507
AflIII ACRYGT 3 cut(s) 1365, 1458, 1696
AgeI ACCGGT 1 cut(s) 991
AgsI TTSAA 3 cut(s) 334, 1265, 2225
AhdI GACNNNNNGTC 1 cut(s) 679
AjiI CACGTC 1 cut(s) 2089
AjnI CCWGG 7 cut(s) 116, 192, 491, 789, 1440, 1500, 1977
Alw21I GWGCWC 6 cut(s) 278, 991, 1014, 1593, 1884, 1992
Alw26I GTCTC 4 cut(s) 687, 705, 761, 1721
Alw44I GTGCAC 2 cut(s) 987, 1589
AlwI GGATC 9 cut(s) 41, 291, 713, 1390, 1683, 1696, 1721, 1734, 2050
AlwNI CAGNNNCTG 3 cut(s) 111, 1054, 1604
Ama87I CYCGRG 5 cut(s) 42, 157, 271, 764, 1923
AoxI GGCC 7 cut(s) 379, 412, 1360, 1580, 1807, 1975, 2175
ApaI GGGCCC 1 cut(s) 1811
ApaLI GTGCAC 2 cut(s) 987, 1589
ApoI RAATTY 2 cut(s) 1333, 1512
AsiGI ACCGGT 1 cut(s) 991
AspLEI GCGC 5 cut(s) 1040, 1064, 1853, 1903, 1974
AspS9I GGNCC 3 cut(s) 1580, 1807, 1808
AsuC2I CCSGG 2 cut(s) 719, 1400
AsuHPI GGTGA 3 cut(s) 958, 1244, 1337
AsuII TTCGAA 1 cut(s) 340
AvaI CYCGRG 5 cut(s) 42, 157, 271, 764, 1923
BaeGI GKGCMC 3 cut(s) 991, 1593, 1811
BalI TGGCCA 2 cut(s) 381, 2177
BamHI GGATCC 2 cut(s) 1688, 1726
BanI GGYRCC 2 cut(s) 386, 1037
BanII GRGCYC 5 cut(s) 278, 920, 1811, 1930, 1992
BbrPI CACGTG 1 cut(s) 1366
Bbv12I GWGCWC 6 cut(s) 278, 991, 1014, 1593, 1884, 1992
BbvCI CCTCAGC 1 cut(s) 1452
BccI CCATC 4 cut(s) 524, 722, 1568, 2186
BceAI ACGGC 9 cut(s) 417, 856, 917, 1132, 1179, 1609, 1838, 2078, 2233
BciT130I CCWGG 7 cut(s) 118, 194, 493, 791, 1442, 1502, 1979
BciVI GTATCC 1 cut(s) 1780
BcnI CCSGG 2 cut(s) 719, 1400
BcoDI GTCTC 4 cut(s) 687, 705, 761, 1721
BfaI CTAG 4 cut(s) 1185, 1676, 1896, 2232
BfmI CTRYAG 1 cut(s) 2103
BfoI RGCGCY 1 cut(s) 1041
BfrI CTTAAG 1 cut(s) 1507
BfuI GTATCC 1 cut(s) 1780
BlpI GCTNAGC 1 cut(s) 1597
Bme1390I CCNGG 9 cut(s) 118, 194, 493, 719, 791, 1400, 1442, 1502, 1979
BmeRI GACNNNNNGTC 1 cut(s) 679
BmeT110I CYCGRG 5 cut(s) 42, 157, 271, 764, 1923
BmgBI CACGTC 1 cut(s) 2089
BmgT120I GGNCC 3 cut(s) 1580, 1807, 1808
BmrFI CCNGG 9 cut(s) 118, 194, 493, 719, 791, 1400, 1442, 1502, 1979
BmsI GCATC 5 cut(s) 471, 817, 1041, 1225, 1912
BpmI CTGGAG 1 cut(s) 1031
Bpu10I CCTNAGC 2 cut(s) 1452, 2169
Bpu1102I GCTNAGC 1 cut(s) 1597
Bpu14I TTCGAA 1 cut(s) 340
BpuEI CTTGAG 5 cut(s) 76, 245, 290, 1261, 1722
BpuMI CCSGG 2 cut(s) 719, 1400
BsaAI YACGTR 3 cut(s) 1366, 1699, 1969
BsaBI GATNNNNATC 1 cut(s) 2054
BsaHI GRCGYC 4 cut(s) 501, 777, 1017, 1038
BsaI GGTCTC 1 cut(s) 761
BsaJI CCNNGG 6 cut(s) 192, 382, 457, 790, 933, 1629
BsaWI WCCGGW 4 cut(s) 134, 991, 1285, 1710
BsaXI ACNNNNNCTCC 4 cut(s) 226, 256, 2059, 2089
Bsc4I CCNNNNNNNGG 4 cut(s) 718, 991, 1447, 1866
Bse118I RCCGGY 5 cut(s) 991, 1034, 1200, 1427, 1447
Bse1I ACTGG 3 cut(s) 13, 382, 1293
Bse3DI GCAATG 1 cut(s) 1579
Bse8I GATNNNNATC 1 cut(s) 2054
BseBI CCWGG 7 cut(s) 118, 194, 493, 791, 1442, 1502, 1979
BseDI CCNNGG 6 cut(s) 192, 382, 457, 790, 933, 1629
BseGI GGATG 5 cut(s) 462, 516, 708, 714, 2116
BseJI GATNNNNATC 1 cut(s) 2054
BseLI CCNNNNNNNGG 4 cut(s) 718, 991, 1447, 1866
BseMI GCAATG 1 cut(s) 1579
BseMII CTCAG 9 cut(s) 845, 1443, 1478, 1539, 1611, 1817, 1962, 2007, 2148
BseNI ACTGG 3 cut(s) 13, 382, 1293
BseRI GAGGAG 7 cut(s) 282, 500, 749, 1168, 1646, 1649, 2045
BseSI GKGCMC 3 cut(s) 991, 1593, 1811
BseYI CCCAGC 4 cut(s) 86, 171, 180, 1519
BsgI GTGCAG 1 cut(s) 97
Bsh1236I CGCG 6 cut(s) 1062, 1460, 1851, 1853, 1867, 1974
Bsh1285I CGRYCG 2 cut(s) 996, 2100
BshFI GGCC 7 cut(s) 381, 414, 1362, 1582, 1809, 1977, 2177
BshNI GGYRCC 2 cut(s) 386, 1037
BshTI ACCGGT 1 cut(s) 991
BsiEI CGRYCG 2 cut(s) 996, 2100
BsiHKAI GWGCWC 6 cut(s) 278, 991, 1014, 1593, 1884, 1992
BsiHKCI CYCGRG 5 cut(s) 42, 157, 271, 764, 1923
BslFI GGGAC 2 cut(s) 81, 488
BslI CCNNNNNNNGG 4 cut(s) 718, 991, 1447, 1866
BsmAI GTCTC 4 cut(s) 687, 705, 761, 1721
BsmBI CGTCTC 1 cut(s) 705
BsmFI GGGAC 2 cut(s) 81, 488
BsnI GGCC 7 cut(s) 381, 414, 1362, 1582, 1809, 1977, 2177
Bso31I GGTCTC 1 cut(s) 761
BsoBI CYCGRG 5 cut(s) 42, 157, 271, 764, 1923
Bsp119I TTCGAA 1 cut(s) 340
Bsp120I GGGCCC 1 cut(s) 1807
Bsp1286I GDGCHC 9 cut(s) 278, 920, 991, 1014, 1593, 1811, 1884, 1930, 1992
Bsp1720I GCTNAGC 1 cut(s) 1597
Bsp19I CCATGG 1 cut(s) 457
BspANI GGCC 7 cut(s) 381, 414, 1362, 1582, 1809, 1977, 2177
BspCNI CTCAG 9 cut(s) 844, 1444, 1479, 1540, 1610, 1818, 1961, 2006, 2149
BspFNI CGCG 6 cut(s) 1062, 1460, 1851, 1853, 1867, 1974
BspHI TCATGA 1 cut(s) 2181
BspPI GGATC 9 cut(s) 41, 291, 713, 1390, 1683, 1696, 1721, 1734, 2050
BspT104I TTCGAA 1 cut(s) 340
BspT107I GGYRCC 2 cut(s) 386, 1037
BspTI CTTAAG 1 cut(s) 1507
BspTNI GGTCTC 1 cut(s) 761
BsrBI CCGCTC 2 cut(s) 1639, 2153
BsrDI GCAATG 1 cut(s) 1579
BsrFI RCCGGY 5 cut(s) 991, 1034, 1200, 1427, 1447
BsrI ACTGG 3 cut(s) 13, 382, 1293
BssAI RCCGGY 5 cut(s) 991, 1034, 1200, 1427, 1447
BssECI CCNNGG 6 cut(s) 192, 382, 457, 790, 933, 1629
BssNI GRCGYC 4 cut(s) 501, 777, 1017, 1038
BssT1I CCWWGG 2 cut(s) 382, 457
Bst2UI CCWGG 7 cut(s) 118, 194, 493, 791, 1442, 1502, 1979
Bst4CI ACNGT 7 cut(s) 754, 986, 1140, 1172, 1316, 1349, 1792
Bst6I CTCTTC 5 cut(s) 323, 690, 820, 910, 1183
BstACI GRCGYC 4 cut(s) 501, 777, 1017, 1038
BstAFI CTTAAG 1 cut(s) 1507
BstAPI GCANNNNNTGC 1 cut(s) 1909
BstBAI YACGTR 3 cut(s) 1366, 1699, 1969
BstBI TTCGAA 1 cut(s) 340
BstC8I GCNNGC 7 cut(s) 21, 600, 1206, 1210, 1449, 1584, 2166
BstDSI CCRYGG 2 cut(s) 457, 933
BstF5I GGATG 5 cut(s) 462, 516, 708, 714, 2116
BstFNI CGCG 6 cut(s) 1062, 1460, 1851, 1853, 1867, 1974
BstH2I RGCGCY 1 cut(s) 1041
BstHHI GCGC 5 cut(s) 1040, 1064, 1853, 1903, 1974
BstMAI GTCTC 4 cut(s) 687, 705, 761, 1721
BstMCI CGRYCG 2 cut(s) 996, 2100
BstNI CCWGG 7 cut(s) 118, 194, 493, 791, 1442, 1502, 1979
BstSCI CCNGG 9 cut(s) 116, 192, 491, 717, 789, 1398, 1440, 1500, 1977
BstSFI CTRYAG 1 cut(s) 2103
BstSLI GKGCMC 3 cut(s) 991, 1593, 1811
BstUI CGCG 6 cut(s) 1062, 1460, 1851, 1853, 1867, 1974
BstX2I RGATCY 5 cut(s) 46, 1395, 1688, 1726, 2055
BstXI CCANNNNNNTGG 1 cut(s) 1072
BstYI RGATCY 5 cut(s) 46, 1395, 1688, 1726, 2055
BsuI GTATCC 1 cut(s) 1780
BsuRI GGCC 7 cut(s) 381, 414, 1362, 1582, 1809, 1977, 2177
BtgI CCRYGG 2 cut(s) 457, 933
BtrI CACGTC 1 cut(s) 2089
BtsCI GGATG 5 cut(s) 462, 516, 708, 714, 2116
BtsI GCAGTG 2 cut(s) 1014, 1593
BtsIMutI CAGTG 2 cut(s) 1014, 1593
Cac8I GCNNGC 7 cut(s) 21, 600, 1206, 1210, 1449, 1584, 2166
CaiI CAGNNNCTG 3 cut(s) 111, 1054, 1604
CciI TCATGA 1 cut(s) 2181
CfoI GCGC 5 cut(s) 1040, 1064, 1853, 1903, 1974
Cfr10I RCCGGY 5 cut(s) 991, 1034, 1200, 1427, 1447
Cfr13I GGNCC 3 cut(s) 1580, 1807, 1808
CseI GACGC 2 cut(s) 358, 1466
Csp6I GTAC 3 cut(s) 667, 1624, 1966
CspAI ACCGGT 1 cut(s) 991
CspCI CAANNNNNGTGG 2 cut(s) 1363, 1398
CviAII CATG 9 cut(s) 206, 446, 458, 1030, 1066, 1300, 1406, 2026, 2182
CviQI GTAC 3 cut(s) 667, 1624, 1966
DinI GGCGCC 1 cut(s) 1039
DraI TTTAAA 1 cut(s) 972
DriI GACNNNNNGTC 1 cut(s) 679
EaeI YGGCCR 4 cut(s) 379, 412, 1360, 2175
Eam1104I CTCTTC 5 cut(s) 323, 690, 820, 910, 1183
Eam1105I GACNNNNNGTC 1 cut(s) 679
EarI CTCTTC 5 cut(s) 323, 690, 820, 910, 1183
EciI GGCGGA 4 cut(s) 419, 945, 1546, 2080
Ecl136II GAGCTC 2 cut(s) 276, 1990
Eco130I CCWWGG 2 cut(s) 382, 457
Eco24I GRGCYC 5 cut(s) 278, 920, 1811, 1930, 1992
Eco31I GGTCTC 1 cut(s) 761
Eco32I GATATC 1 cut(s) 1554
Eco53kI GAGCTC 2 cut(s) 276, 1990
Eco72I CACGTG 1 cut(s) 1366
Eco88I CYCGRG 5 cut(s) 42, 157, 271, 764, 1923
EcoICRI GAGCTC 2 cut(s) 276, 1990
EcoRI GAATTC 1 cut(s) 1512
EcoRII CCWGG 7 cut(s) 116, 192, 491, 789, 1440, 1500, 1977
EcoRV GATATC 1 cut(s) 1554
EcoT14I CCWWGG 2 cut(s) 382, 457
EcoT38I GRGCYC 5 cut(s) 278, 920, 1811, 1930, 1992
EgeI GGCGCC 1 cut(s) 1039
EheI GGCGCC 1 cut(s) 1039
ErhI CCWWGG 2 cut(s) 382, 457
Esp3I CGTCTC 1 cut(s) 705
FaeI CATG 9 cut(s) 209, 449, 461, 1033, 1069, 1303, 1409, 2029, 2185
FaqI GGGAC 2 cut(s) 81, 488
FatI CATG 9 cut(s) 205, 445, 457, 1029, 1065, 1299, 1405, 2025, 2181
FauI CCCGC 5 cut(s) 344, 1385, 1552, 1632, 1653
FblI GTMKAC 1 cut(s) 1802
FokI GGATG 5 cut(s) 449, 503, 695, 701, 2123
FriOI GRGCYC 5 cut(s) 278, 920, 1811, 1930, 1992
FspAI RTGCGCAY 1 cut(s) 1902
FspBI CTAG 4 cut(s) 1185, 1676, 1896, 2232
FspI TGCGCA 1 cut(s) 1902
GlaI GCGC 5 cut(s) 1039, 1063, 1852, 1902, 1973
GsaI CCCAGC 4 cut(s) 90, 175, 184, 1523
GsuI CTGGAG 1 cut(s) 1031
HaeII RGCGCY 1 cut(s) 1041
HaeIII GGCC 7 cut(s) 381, 414, 1362, 1582, 1809, 1977, 2177
HgaI GACGC 2 cut(s) 358, 1466
HhaI GCGC 5 cut(s) 1040, 1064, 1853, 1903, 1974
Hin1I GRCGYC 4 cut(s) 501, 777, 1017, 1038
Hin1II CATG 9 cut(s) 209, 449, 461, 1033, 1069, 1303, 1409, 2029, 2185
Hin6I GCGC 5 cut(s) 1038, 1062, 1851, 1901, 1972
HinP1I GCGC 5 cut(s) 1038, 1062, 1851, 1901, 1972
HincII GTYRAC 2 cut(s) 1175, 1198
HindII GTYRAC 2 cut(s) 1175, 1198
HinfI GANTC 8 cut(s) 59, 629, 680, 890, 1191, 1282, 1529, 1862
HphI GGTGA 3 cut(s) 958, 1244, 1337
Hpy166II GTNNAC 7 cut(s) 633, 989, 1175, 1198, 1374, 1591, 1803
Hpy188I TCNGA 9 cut(s) 73, 560, 705, 826, 834, 922, 1272, 1312, 1996
Hpy188III TCNNGA 9 cut(s) 44, 271, 373, 610, 1048, 1319, 1692, 1739, 2182
Hpy8I GTNNAC 7 cut(s) 633, 989, 1175, 1198, 1374, 1591, 1803
HpyAV CCTTC 5 cut(s) 159, 943, 1240, 1420, 2004
HpyCH4III ACNGT 7 cut(s) 754, 986, 1140, 1172, 1316, 1349, 1792
Hsp92I GRCGYC 4 cut(s) 501, 777, 1017, 1038
Hsp92II CATG 9 cut(s) 209, 449, 461, 1033, 1069, 1303, 1409, 2029, 2185
HspAI GCGC 5 cut(s) 1038, 1062, 1851, 1901, 1972
KasI GGCGCC 1 cut(s) 1037
KroI GCCGGC 1 cut(s) 1447
KroNI GCCGGC 1 cut(s) 1449
LweI GCATC 5 cut(s) 471, 817, 1041, 1225, 1912
MaeI CTAG 4 cut(s) 1185, 1676, 1896, 2232
MaeIII GTNAC 2 cut(s) 143, 323
MbiI CCGCTC 2 cut(s) 1639, 2153
MflI RGATCY 5 cut(s) 46, 1395, 1688, 1726, 2055
MhlI GDGCHC 9 cut(s) 278, 920, 991, 1014, 1593, 1811, 1884, 1930, 1992
MlsI TGGCCA 2 cut(s) 381, 2177
MluCI AATT 2 cut(s) 1333, 1512
MluI ACGCGT 1 cut(s) 1458
MluNI TGGCCA 2 cut(s) 381, 2177
Mly113I GGCGCC 1 cut(s) 1038
MlyI GAGTC 4 cut(s) 638, 689, 1200, 1871
MmeI TCCRAC 4 cut(s) 303, 945, 1119, 2083
Mox20I TGGCCA 2 cut(s) 381, 2177
MroNI GCCGGC 1 cut(s) 1447
MscI TGGCCA 2 cut(s) 381, 2177
MseI TTAA 3 cut(s) 971, 1437, 1508
Msp20I TGGCCA 2 cut(s) 381, 2177
MspA1I CMGCKG 5 cut(s) 1023, 1519, 1547, 1958, 2102
MspCI CTTAAG 1 cut(s) 1507
MspR9I CCNGG 9 cut(s) 118, 194, 493, 719, 791, 1400, 1442, 1502, 1979
MvaI CCWGG 7 cut(s) 118, 194, 493, 791, 1442, 1502, 1979
MvnI CGCG 6 cut(s) 1062, 1460, 1851, 1853, 1867, 1974
NaeI GCCGGC 1 cut(s) 1449
NarI GGCGCC 1 cut(s) 1038
NciI CCSGG 2 cut(s) 719, 1400
NcoI CCATGG 1 cut(s) 457
NgoMIV GCCGGC 1 cut(s) 1447
NlaIII CATG 9 cut(s) 209, 449, 461, 1033, 1069, 1303, 1409, 2029, 2185
NmeAIII GCCGAG 7 cut(s) 1068, 1103, 1517, 1593, 1654, 1885, 2011
NsbI TGCGCA 1 cut(s) 1902
NspV TTCGAA 1 cut(s) 340
PaeR7I CTCGAG 2 cut(s) 42, 271
PagI TCATGA 1 cut(s) 2181
PdiI GCCGGC 1 cut(s) 1449
PfeI GAWTC 4 cut(s) 59, 890, 1282, 1529
PflFI GACNNNGTC 3 cut(s) 554, 752, 776
PfoI TCCNGGA 2 cut(s) 717, 1500
PinAI ACCGGT 1 cut(s) 991
PleI GAGTC 4 cut(s) 637, 688, 1199, 1870
PluTI GGCGCC 1 cut(s) 1041
PmaCI CACGTG 1 cut(s) 1366
PmlI CACGTG 1 cut(s) 1366
PpsI GAGTC 4 cut(s) 637, 688, 1199, 1870
Ppu21I YACGTR 3 cut(s) 1366, 1699, 1969
Psp124BI GAGCTC 2 cut(s) 278, 1992
Psp1406I AACGTT 1 cut(s) 1177
Psp6I CCWGG 7 cut(s) 116, 192, 491, 789, 1440, 1500, 1977
PspCI CACGTG 1 cut(s) 1366
PspFI CCCAGC 4 cut(s) 86, 171, 180, 1519
PspGI CCWGG 7 cut(s) 116, 192, 491, 789, 1440, 1500, 1977
PspOMI GGGCCC 1 cut(s) 1807
PspPI GGNCC 3 cut(s) 1580, 1807, 1808
PstNI CAGNNNCTG 3 cut(s) 111, 1054, 1604
PsuI RGATCY 5 cut(s) 46, 1395, 1688, 1726, 2055
PsyI GACNNNGTC 3 cut(s) 554, 752, 776
PvuII CAGCTG 2 cut(s) 1519, 1958
RsaI GTAC 3 cut(s) 668, 1625, 1967
RsaNI GTAC 3 cut(s) 667, 1624, 1966
SacI GAGCTC 2 cut(s) 278, 1992
SaqAI TTAA 3 cut(s) 971, 1437, 1508
Sau96I GGNCC 3 cut(s) 1580, 1807, 1808
SchI GAGTC 4 cut(s) 638, 689, 1200, 1871
ScrFI CCNGG 9 cut(s) 118, 194, 493, 719, 791, 1400, 1442, 1502, 1979
SduI GDGCHC 9 cut(s) 278, 920, 991, 1014, 1593, 1811, 1884, 1930, 1992
SfaNI GCATC 5 cut(s) 471, 817, 1041, 1225, 1912
SfcI CTRYAG 1 cut(s) 2103
SfoI GGCGCC 1 cut(s) 1039
Sfr274I CTCGAG 2 cut(s) 42, 271
SfuI TTCGAA 1 cut(s) 340
SlaI CTCGAG 2 cut(s) 42, 271
SmlI CTYRAG 8 cut(s) 42, 91, 224, 271, 305, 1240, 1507, 1737
SmoI CTYRAG 8 cut(s) 42, 91, 224, 271, 305, 1240, 1507, 1737
Sse9I AATT 2 cut(s) 1333, 1512
SspDI GGCGCC 1 cut(s) 1037
SspMI CTAG 4 cut(s) 1185, 1676, 1896, 2232
SstI GAGCTC 2 cut(s) 278, 1992
StyD4I CCNGG 9 cut(s) 116, 192, 491, 717, 789, 1398, 1440, 1500, 1977
StyI CCWWGG 2 cut(s) 382, 457
TaaI ACNGT 7 cut(s) 754, 986, 1140, 1172, 1316, 1349, 1792
TaqII GACCGA 1 cut(s) 785
TasI AATT 2 cut(s) 1333, 1512
TauI GCSGC 6 cut(s) 414, 1434, 1977, 2096, 2128, 2156
TfiI GAWTC 4 cut(s) 59, 890, 1282, 1529
Tru1I TTAA 3 cut(s) 971, 1437, 1508
Tru9I TTAA 3 cut(s) 971, 1437, 1508
TscAI CASTG 2 cut(s) 1014, 1593
TspDTI ATGAA 9 cut(s) 72, 222, 807, 1394, 1905, 1952, 2066, 2127, 2198
TspGWI ACGGA 4 cut(s) 311, 951, 1696, 1799
TspRI CASTG 2 cut(s) 1014, 1593
Tth111I GACNNNGTC 3 cut(s) 554, 752, 776
Vha464I CTTAAG 1 cut(s) 1507
VneI GTGCAC 2 cut(s) 987, 1589
XapI RAATTY 2 cut(s) 1333, 1512
XhoI CTCGAG 2 cut(s) 42, 271
XmiI GTMKAC 1 cut(s) 1802
XspI CTAG 4 cut(s) 1185, 1676, 1896, 2232
ZraI GACGTC 3 cut(s) 502, 778, 1018
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.