pycom09g05210

Belongs to the thiolase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
3878107 .. 3886042
7936 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g05210.12

Sequence Viewer

Length: 1650 bp
ATGTCCAACCGTATCCGTGCTTTTGCATTTGCAGCACACCAGCACCAATTCAGAGACTTGGAAGTCAGTCTTCTTCTTCCTCCCACCGACTTCCCGAACCCAGAAGATTTCCATTTGCTTGTAACAATGGCTCCAGTTTCTGCAGAAGCATGTTCCGATTCAATCAACCCTAGAGATGTTTACATCGTTGGTGTTGCAAGAACACCAATGGGTGCATTTCTTGGGGCACTTTCATCTGTACCAGCCACCAAGCTTGGGTCTATAGCTATTGAGGCTGCTCTTAAGAGGGCAAATGTTGATCCAGCACTTGTAGAAGAAGTTTTCTTCGGCAATGTTCTCAGTGCAAATTTGGGGCAGGCTCCTGCTAGACAAGCTGCATTAGGTGCAGGAATCCCTAATTCAGTGATCTGTACCACTGTTAACAAGGTCTGCGCATCAGGGTTGAAAGCTACTATGCTCGCAGCACAAAGCATCCAGTTGGGCATCAATGATGTTGTTGTGGCTGGTGGCATGGAAAGCATGTCAAATGTGCCCAAGTATCTTGCTGAAGCAAGGAAAGGATCTCGACTTGGACATGATTCCCTTGTTGATGGAATGCTGAAGGATGGTCTGTGGGATGTCTATAATGATTATGGCATGGGAGTGTGCGCTGAATTATGTGCTGATCAGCATGCAGTTACAAGGGAGGAGCAGGATAACTTTGCTGTTCAGAGCTTCGAGCGTGGTATTGCTGCCCAAGGTTGTGACGCCTTTTCATGGGAAATTGTTCCGGTAGAAGTTTCAGGAGGAAGGGGAAGACCATCCACCATTGTTGATAAAGATGAAGGTCTAGGCAAGTTTGACGCTGCCAAATTGCGGAAGCTCAGACCAAGTTTTAAGGAGAGTGGAGGTTCTGTGACCGCCGGAAATGCTTCTAGCATCAGTGATGGTGCTGCAGCATTAGTTTTAGCAAGTGGGGAGAAGGTATTAAAGCTTGGGCTACAAGTGATCGCCAAGATCAGTGGATACGCTGATGCTGCTCAGGCACCAGAACTATTTACAACAGCTCCGGCTCTTGCAATTCCAAAAGCTATTTCAAATGCTGGCTTGGAAGCTTCTCAAATTGATTTCTATGAAATTAATGAAGCCTTTGCTGTTGTGGCTCTTGCAAATCAGAAACTTCTTGGACTTAACCCGGAAAAAGTTAATGTGCATGGTGGAGCTGTAGCATTGGGACACCCTCTTGGTTGCAGTGGAGCTCGTATCTTGGTCACTCTTTTAGGGGTACTGAAGCAGAAGAACGGGAAATACGGTGCTGCTGGTATTTGCAATGGCGGCGGAGGTGCATCTGCGCTTGTTTTGGAGCTTTTGTCAATACGCGAAACAGGCGCTCCGCAAGTAGGGGTGATGCGGCGAGGCTGCGTATATCTAACCTCCTCAGACCACAGAATGGAAAAGGGTGTACCGTTGCCAAAATTTGGTGAATGGGATGTCAATGATCCGGCATCAGCTGAGGGATTCACTGTAATCTTCAACAAGGCTAGGAATGAGAAGAAGACGGGTGGTAGACCTGACTCACCATCAAAGGAGGACCGCACATATAAGCAAGGAGCAGTTCTCGGAAAGCCCCCATCTAAAAAATGGTTTTGCTGCTTGTGTGCGGAGTCGTGA

Protein Analysis

550

Amino Acids

57.49

Weight (kDa)

6.48

Isoelectric Point (pI)

30.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012806)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 62
Acc16I TGCGCA 1 cut(s) 433
AccB1I GGYRCC 1 cut(s) 1024
AccB7I CCANNNNNTGG 2 cut(s) 1429, 1457
AccI GTMKAC 1 cut(s) 1546
AccII CGCG 1 cut(s) 1359
AciI CCGC 8 cut(s) 856, 900, 1314, 1317, 1373, 1390, 1573, 1640
AclWI GGATC 3 cut(s) 293, 568, 1472
AcsI RAATTY 2 cut(s) 346, 1454
AcuI CTGAAG 3 cut(s) 567, 620, 1289
AcyI GRCGYC 1 cut(s) 747
AfaI GTAC 4 cut(s) 240, 412, 1266, 1443
AfiI CCNNNNNNNGG 6 cut(s) 255, 756, 855, 1379, 1429, 1457
AflII CTTAAG 1 cut(s) 281
AgsI TTSAA 4 cut(s) 162, 445, 1077, 1513
AjuI GAANNNNNNNTTGG 2 cut(s) 1057, 1089
Alw21I GWGCWC 1 cut(s) 1240
Alw26I GTCTC 1 cut(s) 48
AlwI GGATC 3 cut(s) 293, 568, 1472
AlwNI CAGNNNCTG 1 cut(s) 140
ApoI RAATTY 2 cut(s) 346, 1454
AseI ATTAAT 1 cut(s) 1119
Asp700I GAANNNNTTC 2 cut(s) 765, 910
AspLEI GCGC 4 cut(s) 434, 650, 1333, 1370
AspS9I GGNCC 1 cut(s) 1570
AsuC2I CCSGG 1 cut(s) 1175
AsuHPI GGTGA 3 cut(s) 1396, 1472, 1548
AvaII GGWCC 1 cut(s) 1570
BaeGI GKGCMC 2 cut(s) 229, 534
BanI GGYRCC 1 cut(s) 1024
BanII GRGCYC 1 cut(s) 1240
BbsI GAAGAC 3 cut(s) 62, 802, 1541
Bbv12I GWGCWC 1 cut(s) 1240
BbvCI CCTCAGC 1 cut(s) 1491
BccI CCATC 6 cut(s) 584, 599, 808, 920, 1567, 1618
BciVI GTATCC 2 cut(s) 23, 998
BclI TGATCA 1 cut(s) 664
BcnI CCSGG 1 cut(s) 1175
BcoDI GTCTC 1 cut(s) 48
BfaI CTAG 5 cut(s) 171, 366, 830, 915, 1521
BfmI CTRYAG 4 cut(s) 141, 261, 933, 1203
BfoI RGCGCY 1 cut(s) 1371
BfrI CTTAAG 1 cut(s) 281
BfuI GTATCC 2 cut(s) 23, 998
Bme1390I CCNGG 1 cut(s) 1175
Bme18I GGWCC 1 cut(s) 1570
BmgT120I GGNCC 1 cut(s) 1570
BmiI GGNNCC 3 cut(s) 132, 360, 1026
BmrFI CCNGG 1 cut(s) 1175
BmsI GCATC 8 cut(s) 443, 480, 492, 927, 1003, 1334, 1377, 1493
BpiI GAAGAC 3 cut(s) 62, 802, 1541
BplI GAGNNNNNCTC 2 cut(s) 1581, 1613
BpmI CTGGAG 1 cut(s) 117
Bpu10I CCTNAGC 2 cut(s) 1020, 1491
BpuMI CCSGG 1 cut(s) 1175
BsaHI GRCGYC 1 cut(s) 747
BsaJI CCNNGG 1 cut(s) 736
BsaWI WCCGGW 1 cut(s) 769
Bsc4I CCNNNNNNNGG 6 cut(s) 255, 756, 855, 1379, 1429, 1457
Bse1I ACTGG 2 cut(s) 134, 475
Bse3DI GCAATG 2 cut(s) 337, 1315
BseDI CCNNGG 1 cut(s) 736
BseGI GGATG 5 cut(s) 471, 610, 622, 800, 1474
BseLI CCNNNNNNNGG 6 cut(s) 255, 756, 855, 1379, 1429, 1457
BseMI GCAATG 2 cut(s) 337, 1315
BseMII CTCAG 5 cut(s) 352, 877, 1034, 1431, 1482
BseNI ACTGG 2 cut(s) 134, 475
BseRI GAGGAG 2 cut(s) 701, 1405
BseSI GKGCMC 2 cut(s) 229, 534
BsgI GTGCAG 1 cut(s) 405
Bsh1236I CGCG 1 cut(s) 1359
BshNI GGYRCC 1 cut(s) 1024
BsiHKAI GWGCWC 1 cut(s) 1240
BsiSI CCGG 5 cut(s) 770, 903, 1049, 1175, 1481
BslFI GGGAC 1 cut(s) 1227
BslI CCNNNNNNNGG 6 cut(s) 255, 756, 855, 1379, 1429, 1457
BsmAI GTCTC 1 cut(s) 48
BsmFI GGGAC 1 cut(s) 1227
BsmI GAATGC 1 cut(s) 600
Bsp1286I GDGCHC 3 cut(s) 229, 534, 1240
Bsp143I GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
BspACI CCGC 8 cut(s) 856, 900, 1314, 1317, 1373, 1390, 1573, 1640
BspCNI CTCAG 5 cut(s) 351, 876, 1033, 1430, 1483
BspFNI CGCG 1 cut(s) 1359
BspLI GGNNCC 3 cut(s) 132, 360, 1026
BspMAI CTGCAG 2 cut(s) 145, 937
BspPI GGATC 3 cut(s) 293, 568, 1472
BspT107I GGYRCC 1 cut(s) 1024
BspTI CTTAAG 1 cut(s) 281
BsrDI GCAATG 2 cut(s) 337, 1315
BsrI ACTGG 2 cut(s) 134, 475
BssECI CCNNGG 1 cut(s) 736
BssMI GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
BssNI GRCGYC 1 cut(s) 747
BssT1I CCWWGG 1 cut(s) 736
Bst4CI ACNGT 5 cut(s) 11, 418, 1292, 1446, 1504
BstACI GRCGYC 1 cut(s) 747
BstAFI CTTAAG 1 cut(s) 281
BstAPI GCANNNNNTGC 1 cut(s) 383
BstC8I GCNNGC 4 cut(s) 357, 459, 672, 1084
BstDEI CTNAG 5 cut(s) 338, 863, 1020, 1417, 1491
BstF5I GGATG 5 cut(s) 471, 610, 622, 800, 1474
BstFNI CGCG 1 cut(s) 1359
BstH2I RGCGCY 1 cut(s) 1371
BstHHI GCGC 4 cut(s) 434, 650, 1333, 1370
BstKTI GATC 7 cut(s) 301, 408, 563, 667, 990, 999, 1480
BstMAI GTCTC 1 cut(s) 48
BstMBI GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
BstNSI RCATGY 3 cut(s) 153, 523, 674
BstSCI CCNGG 1 cut(s) 1173
BstSFI CTRYAG 4 cut(s) 141, 261, 933, 1203
BstSLI GKGCMC 2 cut(s) 229, 534
BstUI CGCG 1 cut(s) 1359
BstV2I GAAGAC 3 cut(s) 62, 802, 1541
BstX2I RGATCY 1 cut(s) 560
BstYI RGATCY 1 cut(s) 560
BsuI GTATCC 2 cut(s) 23, 998
BtsCI GGATG 5 cut(s) 471, 610, 622, 800, 1474
BtsI GCAGTG 1 cut(s) 1237
BtsIMutI CAGTG 7 cut(s) 346, 408, 414, 928, 1006, 1237, 1500
Cac8I GCNNGC 4 cut(s) 357, 459, 672, 1084
CaiI CAGNNNCTG 1 cut(s) 140
CfoI GCGC 4 cut(s) 434, 650, 1333, 1370
Cfr13I GGNCC 1 cut(s) 1570
CseI GACGC 2 cut(s) 755, 851
Csp6I GTAC 4 cut(s) 239, 411, 1265, 1442
CspCI CAANNNNNGTGG 6 cut(s) 235, 270, 793, 828, 982, 1017
CviAII CATG 8 cut(s) 150, 511, 520, 575, 637, 671, 756, 1193
CviQI GTAC 4 cut(s) 239, 411, 1265, 1442
DdeI CTNAG 5 cut(s) 338, 863, 1020, 1417, 1491
DpnI GATC 7 cut(s) 300, 407, 562, 666, 989, 998, 1479
DpnII GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
DrdI GACNNNNNNGTC 1 cut(s) 62
DseDI GACNNNNNNGTC 1 cut(s) 62
EciI GGCGGA 1 cut(s) 1332
Ecl136II GAGCTC 1 cut(s) 1238
Eco130I CCWWGG 1 cut(s) 736
Eco24I GRGCYC 1 cut(s) 1240
Eco47I GGWCC 1 cut(s) 1570
Eco53kI GAGCTC 1 cut(s) 1238
Eco57I CTGAAG 3 cut(s) 567, 620, 1289
EcoICRI GAGCTC 1 cut(s) 1238
EcoT14I CCWWGG 1 cut(s) 736
EcoT38I GRGCYC 1 cut(s) 1240
ErhI CCWWGG 1 cut(s) 736
FaeI CATG 8 cut(s) 153, 514, 523, 578, 640, 674, 759, 1196
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FaqI GGGAC 1 cut(s) 1227
FatI CATG 8 cut(s) 149, 510, 519, 574, 636, 670, 755, 1192
FbaI TGATCA 1 cut(s) 664
FblI GTMKAC 1 cut(s) 1546
FokI GGATG 5 cut(s) 458, 617, 629, 787, 1481
FriOI GRGCYC 1 cut(s) 1240
FspBI CTAG 5 cut(s) 171, 366, 830, 915, 1521
FspI TGCGCA 1 cut(s) 433
GlaI GCGC 4 cut(s) 433, 649, 1332, 1369
GsuI CTGGAG 1 cut(s) 117
HaeII RGCGCY 1 cut(s) 1371
HapII CCGG 5 cut(s) 770, 903, 1049, 1175, 1481
HgaI GACGC 2 cut(s) 755, 851
HhaI GCGC 4 cut(s) 434, 650, 1333, 1370
Hin1I GRCGYC 1 cut(s) 747
Hin1II CATG 8 cut(s) 153, 514, 523, 578, 640, 674, 759, 1196
Hin6I GCGC 4 cut(s) 432, 648, 1331, 1368
HinP1I GCGC 4 cut(s) 432, 648, 1331, 1368
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HindIII AAGCTT 3 cut(s) 251, 971, 1092
HinfI GANTC 6 cut(s) 158, 390, 578, 1497, 1553, 1643
HpaI GTTAAC 1 cut(s) 421
HpaII CCGG 5 cut(s) 770, 903, 1049, 1175, 1481
HphI GGTGA 3 cut(s) 1396, 1472, 1548
Hpy166II GTNNAC 4 cut(s) 181, 421, 1442, 1547
Hpy188I TCNGA 7 cut(s) 53, 157, 711, 866, 1155, 1420, 1601
Hpy188III TCNNGA 4 cut(s) 94, 564, 783, 1647
Hpy8I GTNNAC 4 cut(s) 181, 421, 1442, 1547
HpyAV CCTTC 4 cut(s) 595, 783, 818, 955
HpyCH4III ACNGT 5 cut(s) 11, 418, 1292, 1446, 1504
HpyF3I CTNAG 5 cut(s) 338, 863, 1020, 1417, 1491
Hsp92I GRCGYC 1 cut(s) 747
Hsp92II CATG 8 cut(s) 153, 514, 523, 578, 640, 674, 759, 1196
HspAI GCGC 4 cut(s) 432, 648, 1331, 1368
Ksp22I TGATCA 1 cut(s) 664
KspAI GTTAAC 1 cut(s) 421
Kzo9I GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
LmnI GCTCC 9 cut(s) 136, 364, 688, 1051, 1199, 1235, 1342, 1375, 1589
LweI GCATC 8 cut(s) 443, 480, 492, 927, 1003, 1334, 1377, 1493
MaeI CTAG 5 cut(s) 171, 366, 830, 915, 1521
MaeIII GTNAC 5 cut(s) 121, 676, 743, 895, 1249
MalI GATC 7 cut(s) 300, 407, 562, 666, 989, 998, 1479
MboI GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
MflI RGATCY 1 cut(s) 560
MhlI GDGCHC 3 cut(s) 229, 534, 1240
MlyI GAGTC 1 cut(s) 1547
MmeI TCCRAC 1 cut(s) 30
MroXI GAANNNNTTC 2 cut(s) 765, 910
MseI TTAA 7 cut(s) 282, 420, 876, 968, 1119, 1170, 1185
MslI CAYNNNNRTG 1 cut(s) 641
MspA1I CMGCKG 1 cut(s) 1490
MspCI CTTAAG 1 cut(s) 281
MspI CCGG 5 cut(s) 770, 903, 1049, 1175, 1481
MspR9I CCNGG 1 cut(s) 1175
Mva1269I GAATGC 1 cut(s) 600
MvnI CGCG 1 cut(s) 1359
NciI CCSGG 1 cut(s) 1175
NdeII GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
NlaIII CATG 8 cut(s) 153, 514, 523, 578, 640, 674, 759, 1196
NlaIV GGNNCC 3 cut(s) 132, 360, 1026
NmuCI GTSAC 3 cut(s) 743, 895, 1249
NsbI TGCGCA 1 cut(s) 433
NspI RCATGY 3 cut(s) 153, 523, 674
PaeI GCATGC 1 cut(s) 674
PctI GAATGC 1 cut(s) 600
PdmI GAANNNNTTC 2 cut(s) 765, 910
PfeI GAWTC 4 cut(s) 158, 390, 578, 1497
PflMI CCANNNNNTGG 2 cut(s) 1429, 1457
PleI GAGTC 1 cut(s) 1547
PpsI GAGTC 1 cut(s) 1547
PshBI ATTAAT 1 cut(s) 1119
Psp124BI GAGCTC 1 cut(s) 1240
PspN4I GGNNCC 3 cut(s) 132, 360, 1026
PspPI GGNCC 1 cut(s) 1570
PsrI GAACNNNNNNTAC 2 cut(s) 1271, 1303
PstI CTGCAG 2 cut(s) 145, 937
PstNI CAGNNNCTG 1 cut(s) 140
PsuI RGATCY 1 cut(s) 560
PvuII CAGCTG 1 cut(s) 1490
RsaI GTAC 4 cut(s) 240, 412, 1266, 1443
RsaNI GTAC 4 cut(s) 239, 411, 1265, 1442
RseI CAYNNNNRTG 1 cut(s) 641
SacI GAGCTC 1 cut(s) 1240
SaqAI TTAA 7 cut(s) 282, 420, 876, 968, 1119, 1170, 1185
Sau3AI GATC 7 cut(s) 298, 405, 560, 664, 987, 996, 1477
Sau96I GGNCC 1 cut(s) 1570
SchI GAGTC 1 cut(s) 1547
ScrFI CCNGG 1 cut(s) 1175
SduI GDGCHC 3 cut(s) 229, 534, 1240
SfaNI GCATC 8 cut(s) 443, 480, 492, 927, 1003, 1334, 1377, 1493
SfcI CTRYAG 4 cut(s) 141, 261, 933, 1203
SinI GGWCC 1 cut(s) 1570
SmiMI CAYNNNNRTG 1 cut(s) 641
SmlI CTYRAG 1 cut(s) 281
SmoI CTYRAG 1 cut(s) 281
SphI GCATGC 1 cut(s) 674
SsiI CCGC 8 cut(s) 856, 900, 1314, 1317, 1373, 1390, 1573, 1640
SspMI CTAG 5 cut(s) 171, 366, 830, 915, 1521
SstI GAGCTC 1 cut(s) 1240
StyD4I CCNGG 1 cut(s) 1173
StyI CCWWGG 1 cut(s) 736
TaaI ACNGT 5 cut(s) 11, 418, 1292, 1446, 1504
TaqI TCGA 2 cut(s) 565, 717
TauI GCSGC 2 cut(s) 1317, 1393
TfiI GAWTC 4 cut(s) 158, 390, 578, 1497
Tru1I TTAA 7 cut(s) 282, 420, 876, 968, 1119, 1170, 1185
Tru9I TTAA 7 cut(s) 282, 420, 876, 968, 1119, 1170, 1185
TscAI CASTG 7 cut(s) 346, 408, 421, 928, 1006, 1237, 1507
TseFI GTSAC 3 cut(s) 743, 895, 1249
Tsp45I GTSAC 3 cut(s) 743, 895, 1249
TspDTI ATGAA 5 cut(s) 222, 744, 837, 1128, 1137
TspGWI ACGGA 1 cut(s) 5
TspRI CASTG 7 cut(s) 346, 408, 421, 928, 1006, 1237, 1507
Van91I CCANNNNNTGG 2 cut(s) 1429, 1457
Vha464I CTTAAG 1 cut(s) 281
VpaK11BI GGWCC 1 cut(s) 1570
VspI ATTAAT 1 cut(s) 1119
XapI RAATTY 2 cut(s) 346, 1454
XceI RCATGY 3 cut(s) 153, 523, 674
XcmI CCANNNNNNNNNTGG 1 cut(s) 1617
XmiI GTMKAC 1 cut(s) 1546
XmnI GAANNNNTTC 2 cut(s) 765, 910
XspI CTAG 5 cut(s) 171, 366, 830, 915, 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.