pycom09g08640

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0001677
Physical Location & Seq
Reverse (-)
6706267 .. 6711202
4936 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1899 bp
ATGAAGGAGCAGCCCATAGTCTCAAAAAATGAGAGGTCAGTTTCTCCTAATCCTTCTCCGGATGCTGCCACCATAGGTCTTCCAAGGGAGGCAGCAGGTCAATCAGGTCCTTTTGGTTCAGGTGGAGATCACACTGTTTTCCCACCTAATGTTTATGCCCCTCAGGCCCAGCCCTTCTACTATAGAGGTTATGAAAATGGAACTCGTGAGTGGGAAGAATATTCTCCATACATCAACACCGAAGGATTGGAGATTAATTCTCCTGGTGTCTACAATGAGAATCCTTCTTTAGTCTTTCATTCTGGATATGGCTACAATCCGCAAATGCCGTATGGGCCTTACTCCCCAGTTACAACACCAATGCCATCTGTAGGTGGAGATGCCCAGTTATATTCCCCCCAGCAATACCCATTTTCGGGACCGCCTTATTATCAGCAGCTTGGTCCTCCGAGCATGCAATATATTACCTCACCTACGACAGTTTCACAACCAGAGCTCACCACCTTAGTTAATATCGACCAACAAGGTGACAATATGCTTTTTGGACCAAGGCCTGGTTATCATCCTCCAGTGGGATCTATTGGTAGAGGCAATTTTCCTGGAAATCCTGGTAGTCATGGTTTTCATGACTTGCAGCAAGGATTTGATGGATTTAGATCTGGGGGTCTTTGGTCAGACTGGCCAAAACCCTCAGACAGGCACAGGTCTCCCTTATCGCCATCAGTGTCTCCACAGCCAATTGGCCCACTGGGCTCATATGGGCAGAATGTTAGCATGGCTTCTCAACAACAAAGGTCGATGTATGGGTTTGGATCTGGTTCAAACTCTTATAACAGAGGCTACATGCCCAGTGGTTATAATCAGGGATCTGGCCTTGGAAGTGCATCGTTTTCTAGCTTTGGAGCTAACAATCGTGGCTTTCTATCATTAGAAAATAGCAAGCGGCATGTGAGGGGTAGTGGTCCTATATGCAGTTGCAATGCCCCCCTTGATATTCTTTGTGAGCAGAATCGAGGCCCGAGGGCCTCAAAGCCAAAGAGTCAAATCATGGCTGATAGCTCTGTGGAGAACACCAAACATAATGCTTCTACAAACAAGGTCCTTGATGAATCATTCAACAGGCCTGATTTTGTAACAGAGTACAAAGATGCTAAGTTCTTCATTATCAAGTCATACAGTGAAGATAATGTTCACAAGAGCATCAAGTATGGTGTCTGGGCCAGCACGCCAAACGGTAACAGAAAGTTGGATGCTGCATATCGTGAAGCTAAGGAGATGCATGATGGCTGCCCAATTTTTCTCTTCTTTTCGGTAAATGCTAGTGCTCAGTTCTGTGGGGTGGCTGAAATGATTGGACCTGTTGATTTTGACAAGAGTCTGGATTACTGGCAGCAAGACAAATGGAGTGGCCAGTTCCCTGTGAAGTGGCATATGATTAAAGACGTCCCCAATAGTCAGTTTCGTCACATCATTCTTGAAAATAATGACAACAAGCCTGTAACTAACAGCCGAGATACTCAAGAGGTAAAATTGGAGCAGGGAATTGAGATGTTGAATATCTTCAAGAATTATGAAACAGAGATGTCGATTCTAGATGACTTTGAATTTTATGAAGACCGGCAGAAAGCAATGCAAGAGCGGAAGGCCAGACAGCAAGCCAGCCTGATTGCTGTCGGTGTAGTCGGAGAAAATGAGCACAAAAATGCTGTTCAAATTCCCAGTGATTTCATCAAGCACATGTCCAAGAGTTTTGCTCAAGTTGTCCGATTGGATGAGGGCAGTAAAGAAGTTAATACCCTTTCTGAAAGAGCTAGTCCTGCTTCTGACGGCTCCATTGGTGCCAGAGTAAAACTTGAAGATGCGATGCCAGCTTCCGTGCCTTCTGTTCAGACCGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

633

Amino Acids

69.74

Weight (kDa)

5.83

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 384 - 522 2.2e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 831, 858
AatII GACGTC 1 cut(s) 1446
Acc36I ACCTGC 1 cut(s) 86
AccB1I GGYRCC 1 cut(s) 1838
AccB7I CCANNNNNTGG 1 cut(s) 554
AccBSI CCGCTC 1 cut(s) 1639
AccI GTMKAC 1 cut(s) 270
AccIII TCCGGA 1 cut(s) 58
AciI CCGC 4 cut(s) 320, 422, 943, 1639
AclWI GGATC 3 cut(s) 583, 820, 874
AcoI YGGCCR 2 cut(s) 680, 1408
AcsI RAATTY 2 cut(s) 1604, 1713
AcyI GRCGYC 1 cut(s) 1443
AfaI GTAC 1 cut(s) 1142
AfiI CCNNNNNNNGG 6 cut(s) 371, 415, 416, 554, 572, 696
AflIII ACRYGT 1 cut(s) 1737
AgeI ACCGGT 1 cut(s) 1892
AgsI TTSAA 8 cut(s) 822, 1117, 1478, 1555, 1564, 1604, 1712, 1856
AjnI CCWGG 4 cut(s) 262, 553, 598, 607
AluBI AGCT 8 cut(s) 439, 496, 897, 905, 1059, 1268, 1811, 1871
AluI AGCT 8 cut(s) 439, 496, 897, 905, 1059, 1268, 1811, 1871
Alw21I GWGCWC 3 cut(s) 498, 1327, 1698
Alw26I GTCTC 3 cut(s) 25, 711, 732
AlwI GGATC 3 cut(s) 583, 820, 874
Ama87I CYCGRG 1 cut(s) 1018
Aor13HI TCCGGA 1 cut(s) 58
ApeKI GCWGC 8 cut(s) 10, 65, 92, 436, 634, 1253, 1287, 1390
ApoI RAATTY 2 cut(s) 1604, 1713
AseI ATTAAT 1 cut(s) 255
AsiGI ACCGGT 1 cut(s) 1892
Asp700I GAANNNNTTC 1 cut(s) 1559
AsuHPI GGTGA 3 cut(s) 462, 490, 539
AvaI CYCGRG 1 cut(s) 1018
AvaII GGWCC 7 cut(s) 107, 419, 443, 545, 962, 1099, 1355
AxyI CCTNAGG 1 cut(s) 162
BalI TGGCCA 2 cut(s) 682, 1410
BanI GGYRCC 1 cut(s) 1838
BanII GRGCYC 2 cut(s) 498, 755
BauI CACGAG 1 cut(s) 204
BbsI GAAGAC 2 cut(s) 71, 1620
Bbv12I GWGCWC 3 cut(s) 498, 1327, 1698
BbvI GCAGC 8 cut(s) 22, 52, 104, 448, 646, 1240, 1274, 1402
BccI CCATC 4 cut(s) 373, 641, 727, 1277
BceAI ACGGC 2 cut(s) 313, 1843
BciT130I CCWGG 4 cut(s) 264, 555, 600, 609
BcoDI GTCTC 3 cut(s) 25, 711, 732
BfaI CTAG 4 cut(s) 894, 1320, 1592, 1812
BfmI CTRYAG 2 cut(s) 181, 369
BfuAI ACCTGC 1 cut(s) 86
BglI GCCNNNNNGGC 3 cut(s) 164, 334, 750
BglII AGATCT 1 cut(s) 656
BisI GCNGC 9 cut(s) 11, 66, 93, 437, 635, 944, 1254, 1288, 1391
BlsI GCNGC 9 cut(s) 12, 67, 94, 438, 636, 945, 1255, 1289, 1392
Bme1390I CCNGG 4 cut(s) 264, 555, 600, 609
Bme18I GGWCC 7 cut(s) 107, 419, 443, 545, 962, 1099, 1355
BmeT110I CYCGRG 1 cut(s) 1018
BmiI GGNNCC 3 cut(s) 420, 1831, 1840
BmrFI CCNGG 4 cut(s) 264, 555, 600, 609
BmrI ACTGGG 5 cut(s) 341, 379, 758, 843, 1713
BmsI GCATC 9 cut(s) 52, 370, 893, 1138, 1209, 1240, 1266, 1849, 1854
BmuI ACTGGG 5 cut(s) 341, 379, 758, 843, 1713
BoxI GACNNNNGTC 1 cut(s) 1374
BpiI GAAGAC 2 cut(s) 71, 1620
BplI GAGNNNNNCTC 2 cut(s) 1738, 1770
BpmI CTGGAG 1 cut(s) 552
Bpu10I CCTNAGC 1 cut(s) 1269
BpuEI CTTGAG 2 cut(s) 1503, 1740
BsaBI GATNNNNATC 1 cut(s) 655
BsaHI GRCGYC 1 cut(s) 1443
BsaI GGTCTC 1 cut(s) 711
BsaJI CCNNGG 4 cut(s) 83, 548, 874, 1019
BsaWI WCCGGW 2 cut(s) 58, 1892
Bsc4I CCNNNNNNNGG 6 cut(s) 371, 415, 416, 554, 572, 696
Bse118I RCCGGY 2 cut(s) 1617, 1892
Bse1I ACTGG 9 cut(s) 347, 385, 569, 683, 753, 849, 1391, 1411, 1719
Bse21I CCTNAGG 1 cut(s) 162
Bse3DI GCAATG 2 cut(s) 985, 1635
Bse8I GATNNNNATC 1 cut(s) 655
BseAI TCCGGA 1 cut(s) 58
BseBI CCWGG 4 cut(s) 264, 555, 600, 609
BseDI CCNNGG 4 cut(s) 83, 548, 874, 1019
BseGI GGATG 4 cut(s) 67, 562, 1255, 1777
BseJI GATNNNNATC 1 cut(s) 655
BseLI CCNNNNNNNGG 6 cut(s) 371, 415, 416, 554, 572, 696
BseMI GCAATG 2 cut(s) 985, 1635
BseMII CTCAG 3 cut(s) 176, 705, 1340
BseNI ACTGG 9 cut(s) 347, 385, 569, 683, 753, 849, 1391, 1411, 1719
BseXI GCAGC 8 cut(s) 22, 52, 104, 448, 646, 1240, 1274, 1402
BseYI CCCAGC 2 cut(s) 168, 399
BshNI GGYRCC 1 cut(s) 1838
BshTI ACCGGT 1 cut(s) 1892
BsiHKAI GWGCWC 3 cut(s) 498, 1327, 1698
BsiHKCI CYCGRG 1 cut(s) 1018
BsiSI CCGG 3 cut(s) 59, 1618, 1893
BslFI GGGAC 2 cut(s) 432, 1430
BslI CCNNNNNNNGG 6 cut(s) 371, 415, 416, 554, 572, 696
BsmAI GTCTC 3 cut(s) 25, 711, 732
BsmFI GGGAC 2 cut(s) 432, 1430
Bso31I GGTCTC 1 cut(s) 711
BsoBI CYCGRG 1 cut(s) 1018
Bsp1286I GDGCHC 4 cut(s) 498, 755, 1327, 1698
Bsp13I TCCGGA 1 cut(s) 58
Bsp143I GATC 5 cut(s) 127, 575, 656, 812, 866
BspACI CCGC 4 cut(s) 320, 422, 943, 1639
BspCNI CTCAG 3 cut(s) 175, 704, 1339
BspEI TCCGGA 1 cut(s) 58
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 3 cut(s) 420, 1831, 1840
BspMI ACCTGC 1 cut(s) 86
BspPI GGATC 3 cut(s) 583, 820, 874
BspT107I GGYRCC 1 cut(s) 1838
BspTNI GGTCTC 1 cut(s) 711
BsrBI CCGCTC 1 cut(s) 1639
BsrDI GCAATG 2 cut(s) 985, 1635
BsrFI RCCGGY 2 cut(s) 1617, 1892
BsrI ACTGG 9 cut(s) 347, 385, 569, 683, 753, 849, 1391, 1411, 1719
BssAI RCCGGY 2 cut(s) 1617, 1892
BssECI CCNNGG 4 cut(s) 83, 548, 874, 1019
BssMI GATC 5 cut(s) 127, 575, 656, 812, 866
BssNI GRCGYC 1 cut(s) 1443
BssSI CACGAG 1 cut(s) 204
BssT1I CCWWGG 3 cut(s) 83, 548, 874
Bst2BI CACGAG 1 cut(s) 204
Bst2UI CCWGG 4 cut(s) 264, 555, 600, 609
Bst4CI ACNGT 4 cut(s) 136, 481, 1178, 1235
Bst6I CTCTTC 1 cut(s) 1307
BstACI GRCGYC 1 cut(s) 1443
BstC8I GCNNGC 7 cut(s) 455, 941, 1222, 1226, 1656, 1660, 1869
BstDEI CTNAG 6 cut(s) 162, 505, 691, 1152, 1269, 1326
BstENI CCTNNNNNAGG 1 cut(s) 694
BstF5I GGATG 4 cut(s) 67, 562, 1255, 1777
BstKTI GATC 5 cut(s) 130, 578, 659, 815, 869
BstMAI GTCTC 3 cut(s) 25, 711, 732
BstMBI GATC 5 cut(s) 127, 575, 656, 812, 866
BstMWI GCNNNNNNNGC 5 cut(s) 164, 334, 750, 1817, 1868
BstNI CCWGG 4 cut(s) 264, 555, 600, 609
BstNSI RCATGY 4 cut(s) 457, 847, 950, 1741
BstPAI GACNNNNGTC 1 cut(s) 1374
BstSCI CCNGG 4 cut(s) 262, 553, 598, 607
BstSFI CTRYAG 2 cut(s) 181, 369
BstV1I GCAGC 8 cut(s) 22, 52, 104, 448, 646, 1240, 1274, 1402
BstV2I GAAGAC 2 cut(s) 71, 1620
BstX2I RGATCY 4 cut(s) 575, 656, 812, 866
BstYI RGATCY 4 cut(s) 575, 656, 812, 866
Bsu36I CCTNAGG 1 cut(s) 162
BtgZI GCGATG 1 cut(s) 1877
BtsCI GGATG 4 cut(s) 67, 562, 1255, 1777
BtsIMutI CAGTG 7 cut(s) 132, 576, 729, 746, 856, 1183, 1726
BveI ACCTGC 1 cut(s) 86
Cac8I GCNNGC 7 cut(s) 455, 941, 1222, 1226, 1656, 1660, 1869
CciI TCATGA 1 cut(s) 625
Cfr10I RCCGGY 2 cut(s) 1617, 1892
Csp6I GTAC 1 cut(s) 1141
CspAI ACCGGT 1 cut(s) 1892
CspCI CAANNNNNGTGG 2 cut(s) 1387, 1422
CviAII CATG 9 cut(s) 454, 617, 626, 775, 844, 947, 1048, 1280, 1738
CviQI GTAC 1 cut(s) 1141
DdeI CTNAG 6 cut(s) 162, 505, 691, 1152, 1269, 1326
DpnI GATC 5 cut(s) 129, 577, 658, 814, 868
DpnII GATC 5 cut(s) 127, 575, 656, 812, 866
EaeI YGGCCR 2 cut(s) 680, 1408
Eam1104I CTCTTC 1 cut(s) 1307
EarI CTCTTC 1 cut(s) 1307
Ecl136II GAGCTC 1 cut(s) 496
Eco130I CCWWGG 3 cut(s) 83, 548, 874
Eco147I AGGCCT 2 cut(s) 553, 1123
Eco24I GRGCYC 2 cut(s) 498, 755
Eco31I GGTCTC 1 cut(s) 711
Eco47I GGWCC 7 cut(s) 107, 419, 443, 545, 962, 1099, 1355
Eco53kI GAGCTC 1 cut(s) 496
Eco81I CCTNAGG 1 cut(s) 162
Eco88I CYCGRG 1 cut(s) 1018
EcoICRI GAGCTC 1 cut(s) 496
EcoNI CCTNNNNNAGG 1 cut(s) 694
EcoO109I RGGNCCY 3 cut(s) 107, 1023, 1099
EcoRII CCWGG 4 cut(s) 262, 553, 598, 607
EcoT14I CCWWGG 3 cut(s) 83, 548, 874
EcoT22I ATGCAT 1 cut(s) 1281
EcoT38I GRGCYC 2 cut(s) 498, 755
ErhI CCWWGG 3 cut(s) 83, 548, 874
FaeI CATG 9 cut(s) 457, 620, 629, 778, 847, 950, 1051, 1283, 1741
FaqI GGGAC 2 cut(s) 432, 1430
FatI CATG 9 cut(s) 453, 616, 625, 774, 843, 946, 1047, 1279, 1737
FauNDI CATATG 2 cut(s) 757, 1431
FblI GTMKAC 1 cut(s) 270
Fnu4HI GCNGC 9 cut(s) 11, 66, 93, 437, 635, 944, 1254, 1288, 1391
FokI GGATG 4 cut(s) 74, 549, 1262, 1784
FriOI GRGCYC 2 cut(s) 498, 755
Fsp4HI GCNGC 9 cut(s) 11, 66, 93, 437, 635, 944, 1254, 1288, 1391
FspBI CTAG 4 cut(s) 894, 1320, 1592, 1812
GluI GCNGC 9 cut(s) 11, 66, 93, 437, 635, 944, 1254, 1288, 1391
GsaI CCCAGC 2 cut(s) 172, 403
GsuI CTGGAG 1 cut(s) 552
HapII CCGG 3 cut(s) 59, 1618, 1893
Hin1I GRCGYC 1 cut(s) 1443
Hin1II CATG 9 cut(s) 457, 620, 629, 778, 847, 950, 1051, 1283, 1741
HinfI GANTC 6 cut(s) 280, 1009, 1039, 1109, 1375, 1588
HpaII CCGG 3 cut(s) 59, 1618, 1893
HphI GGTGA 3 cut(s) 462, 490, 539
Hpy166II GTNNAC 2 cut(s) 271, 1192
Hpy188I TCNGA 8 cut(s) 450, 676, 694, 1685, 1766, 1804, 1825, 1890
Hpy8I GTNNAC 2 cut(s) 271, 1192
HpyAV CCTTC 6 cut(s) 63, 184, 236, 294, 1636, 1890
HpyCH4III ACNGT 4 cut(s) 136, 481, 1178, 1235
HpyCH4IV ACGT 1 cut(s) 1443
HpyCH4V TGCA 8 cut(s) 457, 634, 884, 972, 978, 1256, 1279, 1633
HpyF10VI GCNNNNNNNGC 5 cut(s) 164, 334, 750, 1817, 1868
HpyF3I CTNAG 6 cut(s) 162, 505, 691, 1152, 1269, 1326
HpySE526I ACGT 1 cut(s) 1443
Hsp92I GRCGYC 1 cut(s) 1443
Hsp92II CATG 9 cut(s) 457, 620, 629, 778, 847, 950, 1051, 1283, 1741
Kpn2I TCCGGA 1 cut(s) 58
Kzo9I GATC 5 cut(s) 127, 575, 656, 812, 866
LmnI GCTCC 4 cut(s) 7, 902, 1534, 1835
Lsp1109I GCAGC 8 cut(s) 22, 52, 104, 448, 646, 1240, 1274, 1402
LweI GCATC 9 cut(s) 52, 370, 893, 1138, 1209, 1240, 1266, 1849, 1854
MaeI CTAG 4 cut(s) 894, 1320, 1592, 1812
MaeII ACGT 1 cut(s) 1443
MaeIII GTNAC 6 cut(s) 349, 527, 1132, 1235, 1463, 1498
MalI GATC 5 cut(s) 129, 577, 658, 814, 868
MbiI CCGCTC 1 cut(s) 1639
MboI GATC 5 cut(s) 127, 575, 656, 812, 866
MboII GAAGA 8 cut(s) 71, 227, 1150, 1193, 1294, 1552, 1625, 1868
MfeI CAATTG 1 cut(s) 738
MflI RGATCY 4 cut(s) 575, 656, 812, 866
MhlI GDGCHC 4 cut(s) 498, 755, 1327, 1698
MlsI TGGCCA 2 cut(s) 682, 1410
MluCI AATT 9 cut(s) 256, 592, 738, 1293, 1529, 1542, 1567, 1604, 1713
MluNI TGGCCA 2 cut(s) 682, 1410
MlyI GAGTC 2 cut(s) 1048, 1384
MmeI TCCRAC 2 cut(s) 1227, 1663
Mox20I TGGCCA 2 cut(s) 682, 1410
Mph1103I ATGCAT 1 cut(s) 1281
MroI TCCGGA 1 cut(s) 58
MroXI GAANNNNTTC 1 cut(s) 1559
MscI TGGCCA 2 cut(s) 682, 1410
MseI TTAA 4 cut(s) 255, 510, 1437, 1791
MslI CAYNNNNRTG 1 cut(s) 1701
Msp20I TGGCCA 2 cut(s) 682, 1410
MspI CCGG 3 cut(s) 59, 1618, 1893
MspR9I CCNGG 4 cut(s) 264, 555, 600, 609
MunI CAATTG 1 cut(s) 738
MvaI CCWGG 4 cut(s) 264, 555, 600, 609
MwoI GCNNNNNNNGC 5 cut(s) 164, 334, 750, 1817, 1868
NdeI CATATG 2 cut(s) 757, 1431
NdeII GATC 5 cut(s) 127, 575, 656, 812, 866
NlaIII CATG 9 cut(s) 457, 620, 629, 778, 847, 950, 1051, 1283, 1741
NlaIV GGNNCC 3 cut(s) 420, 1831, 1840
NmeAIII GCCGAG 1 cut(s) 1535
NmuCI GTSAC 2 cut(s) 527, 1463
NsiI ATGCAT 1 cut(s) 1281
NspI RCATGY 4 cut(s) 457, 847, 950, 1741
PaeI GCATGC 1 cut(s) 457
PagI TCATGA 1 cut(s) 625
PceI AGGCCT 2 cut(s) 553, 1123
PciI ACATGT 1 cut(s) 1737
PdmI GAANNNNTTC 1 cut(s) 1559
PfeI GAWTC 4 cut(s) 280, 1009, 1109, 1588
PflMI CCANNNNNTGG 1 cut(s) 554
PfoI TCCNGGA 1 cut(s) 598
PinAI ACCGGT 1 cut(s) 1892
PkrI GCNGC 9 cut(s) 12, 67, 94, 438, 636, 945, 1255, 1289, 1392
PleI GAGTC 2 cut(s) 1047, 1383
PpsI GAGTC 2 cut(s) 1047, 1383
PpuMI RGGWCCY 2 cut(s) 107, 1099
PscI ACATGT 1 cut(s) 1737
PshAI GACNNNNGTC 1 cut(s) 1374
PshBI ATTAAT 1 cut(s) 255
PsiI TTATAA 2 cut(s) 831, 858
Psp124BI GAGCTC 1 cut(s) 498
Psp5II RGGWCCY 2 cut(s) 107, 1099
Psp6I CCWGG 4 cut(s) 262, 553, 598, 607
PspFI CCCAGC 2 cut(s) 168, 399
PspGI CCWGG 4 cut(s) 262, 553, 598, 607
PspN4I GGNNCC 3 cut(s) 420, 1831, 1840
PspPPI RGGWCCY 2 cut(s) 107, 1099
PsuI RGATCY 4 cut(s) 575, 656, 812, 866
RsaI GTAC 1 cut(s) 1142
RsaNI GTAC 1 cut(s) 1141
RseI CAYNNNNRTG 1 cut(s) 1701
SacI GAGCTC 1 cut(s) 498
SaqAI TTAA 4 cut(s) 255, 510, 1437, 1791
SatI GCNGC 9 cut(s) 11, 66, 93, 437, 635, 944, 1254, 1288, 1391
Sau3AI GATC 5 cut(s) 127, 575, 656, 812, 866
SchI GAGTC 2 cut(s) 1048, 1384
ScrFI CCNGG 4 cut(s) 264, 555, 600, 609
SduI GDGCHC 4 cut(s) 498, 755, 1327, 1698
SfaNI GCATC 9 cut(s) 52, 370, 893, 1138, 1209, 1240, 1266, 1849, 1854
SfcI CTRYAG 2 cut(s) 181, 369
SinI GGWCC 7 cut(s) 107, 419, 443, 545, 962, 1099, 1355
SmiMI CAYNNNNRTG 1 cut(s) 1701
SmlI CTYRAG 2 cut(s) 1518, 1755
SmoI CTYRAG 2 cut(s) 1518, 1755
SphI GCATGC 1 cut(s) 457
Sse9I AATT 9 cut(s) 256, 592, 738, 1293, 1529, 1542, 1567, 1604, 1713
SseBI AGGCCT 2 cut(s) 553, 1123
SsiI CCGC 4 cut(s) 320, 422, 943, 1639
SspI AATATT 1 cut(s) 221
SspMI CTAG 4 cut(s) 894, 1320, 1592, 1812
SstI GAGCTC 1 cut(s) 498
StuI AGGCCT 2 cut(s) 553, 1123
StyD4I CCNGG 4 cut(s) 262, 553, 598, 607
StyI CCWWGG 3 cut(s) 83, 548, 874
TaaI ACNGT 4 cut(s) 136, 481, 1178, 1235
TaiI ACGT 1 cut(s) 1446
TaqI TCGA 4 cut(s) 516, 797, 1012, 1586
TasI AATT 9 cut(s) 256, 592, 738, 1293, 1529, 1542, 1567, 1604, 1713
TatI WGTACW 1 cut(s) 1140
TauI GCSGC 1 cut(s) 946
TfiI GAWTC 4 cut(s) 280, 1009, 1109, 1588
Tru1I TTAA 4 cut(s) 255, 510, 1437, 1791
Tru9I TTAA 4 cut(s) 255, 510, 1437, 1791
TscAI CASTG 7 cut(s) 139, 576, 729, 753, 856, 1183, 1726
TseFI GTSAC 2 cut(s) 527, 1463
TseI GCWGC 8 cut(s) 10, 65, 92, 436, 634, 1253, 1287, 1390
Tsp45I GTSAC 2 cut(s) 527, 1463
TspDTI ATGAA 9 cut(s) 17, 207, 287, 614, 1122, 1150, 1587, 1626, 1717
TspGWI ACGGA 1 cut(s) 1864
TspRI CASTG 7 cut(s) 139, 576, 729, 753, 856, 1183, 1726
Van91I CCANNNNNTGG 1 cut(s) 554
VpaK11BI GGWCC 7 cut(s) 107, 419, 443, 545, 962, 1099, 1355
VspI ATTAAT 1 cut(s) 255
XagI CCTNNNNNAGG 1 cut(s) 694
XapI RAATTY 2 cut(s) 1604, 1713
XbaI TCTAGA 1 cut(s) 1591
XceI RCATGY 4 cut(s) 457, 847, 950, 1741
XmiI GTMKAC 1 cut(s) 270
XmnI GAANNNNTTC 1 cut(s) 1559
XspI CTAG 4 cut(s) 894, 1320, 1592, 1812
ZraI GACGTC 1 cut(s) 1444
Zsp2I ATGCAT 1 cut(s) 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.