pycom09g09150

ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
7312154 .. 7314275
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g09150.2

Sequence Viewer

Length: 1161 bp
ATGTGTGGAGGTGCTATTATTTCCGATTTCATAGCGCCGGTGCGGTCCCGCCGGCTCACCGCCGACTACCTCTGGCCCGAGCTAAAAAAACCCAGTTCTGGGAAGCGGCTCTCGAAGCCTCTGAGGTCCGAAATCGTTGACTTGGACGACGACTTCGAGGCTGATTTCCAGGAGTTCAAGGACGAGTCCGATGTGGACGAGGACGATGAAATGGTTGATTCCAGGCCCTCTGCTTTCTCTGCCGGAAAGCCCTCTTCTGCTCGTGGTTCTACCTCTGTGAAATCTGTGGAGTTCAATGGGCAAGCTGAGAAATCTGCAAAGAGAAAAAGGAAGAACCAGTACAGGGGAATTCGCCAGCGCCCATGGGGTAAGTGGGCTGGAGAGATCCGAGACCCAAGGAAAGGGGTTCGGGTTTGGCTTGGAACATTCAACACTGCAGAAGAAGCTGCAAGGGCGTATGATGCTGAGGCACGTAGAATTCGCGGGAAGAAAGCGAAGGTTAATTTCCCTGAAGAAACTCCTCGTGCTTCTGCAAAGCGTTCCATCAAGGAAAATCCTCAGAAATTGATAGCCAAGACAAACTTGAATGGCACTCAGTCAAATCTGAACCAGAACTTCAATTTTGTGAACGACTCAAGTGAGGACTACTACAATGCGCTGAGTTTTCTGGATGAAAAGCCAACAATGAATAACTTTGGATACATGTCCACCTTCCCTGCCAATGAAGATGTTGCACTGAAATCCTCCGTTCCATCAGAAAATGCCCCTTTTTATTTCAGTTCCGATCAGGGAAGCAACTCCTTTGATTGTTCTGACTTTGGCTGGGGAGAACAAGGCTCGAAGACTCCAGAAATCTCATCCGTTCTTTCATCTGTTATGGAAGAAAGTGATAACTCACTGTTTCTGGAGGATTCTAACCCAACAAAGAAGATGAAGCCTAACTCACAGGATCTGGTGCCTCCCGAGGATAATTCGGGAAAGACACTGTCGGATGAGCTCTCAGCTTTTGAGATGAAGTACTTTCAGACCCCATATCTTGATGGGAGCTGGGATTCTTCAGTGGACGCGTTCCTCAACGGTGATGCAACTCAGGATGGTGGTAATCCAGTGGACCTTTGGAGCTTTGATGATCTGTCCGCAATTGTTGGGGAAGCTTTTTAA

Protein Analysis

387

Amino Acids

43.01

Weight (kDa)

4.77

Isoelectric Point (pI)

43.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 955
AccII CGCG 2 cut(s) 483, 1067
AciI CCGC 6 cut(s) 43, 49, 60, 106, 483, 1137
AclWI GGATC 2 cut(s) 379, 957
AcsI RAATTY 2 cut(s) 348, 477
AcuI CTGAAG 2 cut(s) 531, 1041
AfaI GTAC 2 cut(s) 341, 1019
AfiI CCNNNNNNNGG 4 cut(s) 98, 99, 343, 401
AflIII ACRYGT 2 cut(s) 702, 1065
AgsI TTSAA 5 cut(s) 178, 295, 430, 586, 619
AjnI CCWGG 2 cut(s) 168, 221
AluBI AGCT 8 cut(s) 82, 305, 446, 997, 1004, 1047, 1122, 1154
AluI AGCT 8 cut(s) 82, 305, 446, 997, 1004, 1047, 1122, 1154
Alw21I GWGCWC 1 cut(s) 999
Alw26I GTCTC 1 cut(s) 384
AlwI GGATC 2 cut(s) 379, 957
AlwNI CAGNNNCTG 1 cut(s) 952
Ama87I CYCGRG 2 cut(s) 77, 962
AoxI GGCC 2 cut(s) 74, 224
ApeKI GCWGC 1 cut(s) 446
ApoI RAATTY 2 cut(s) 348, 477
ArsI GACNNNNNNTTYG 2 cut(s) 137, 169
AspLEI GCGC 3 cut(s) 37, 360, 658
AspS9I GGNCC 5 cut(s) 45, 75, 126, 225, 1111
AsuHPI GGTGA 2 cut(s) 49, 1091
AvaI CYCGRG 2 cut(s) 77, 962
AvaII GGWCC 3 cut(s) 45, 126, 1111
BanI GGYRCC 1 cut(s) 955
BanII GRGCYC 1 cut(s) 999
BarI GAAGNNNNNNTAC 2 cut(s) 323, 355
BauI CACGAG 2 cut(s) 261, 522
BbsI GAAGAC 1 cut(s) 848
Bbv12I GWGCWC 1 cut(s) 999
BbvCI CCTCAGC 1 cut(s) 465
BbvI GCAGC 1 cut(s) 433
BccI CCATC 4 cut(s) 551, 760, 1034, 1088
BciT130I CCWGG 2 cut(s) 170, 223
BciVI GTATCC 1 cut(s) 692
BcoDI GTCTC 1 cut(s) 384
BfmI CTRYAG 1 cut(s) 435
BfoI RGCGCY 2 cut(s) 38, 361
BfuI GTATCC 1 cut(s) 692
BisI GCNGC 2 cut(s) 107, 447
BlsI GCNGC 2 cut(s) 108, 448
BmcAI AGTACT 1 cut(s) 1019
Bme1390I CCNGG 2 cut(s) 170, 223
Bme18I GGWCC 3 cut(s) 45, 126, 1111
BmeT110I CYCGRG 2 cut(s) 77, 962
BmgT120I GGNCC 5 cut(s) 45, 75, 126, 225, 1111
BmiI GGNNCC 2 cut(s) 47, 957
BmrFI CCNGG 2 cut(s) 170, 223
BmrI ACTGGG 1 cut(s) 87
BmsI GCATC 2 cut(s) 451, 1072
BmuI ACTGGG 1 cut(s) 87
BpiI GAAGAC 1 cut(s) 848
BpmI CTGGAG 3 cut(s) 399, 831, 926
Bpu10I CCTNAGC 1 cut(s) 465
BpuEI CTTGAG 1 cut(s) 619
BsaAI YACGTR 1 cut(s) 473
BsaI GGTCTC 1 cut(s) 384
BsaJI CCNNGG 3 cut(s) 362, 395, 963
Bsc4I CCNNNNNNNGG 4 cut(s) 98, 99, 343, 401
Bse118I RCCGGY 2 cut(s) 37, 51
Bse1I ACTGG 3 cut(s) 93, 337, 1106
BseBI CCWGG 2 cut(s) 170, 223
BseDI CCNNGG 3 cut(s) 362, 395, 963
BseGI GGATG 4 cut(s) 676, 857, 997, 1099
BseLI CCNNNNNNNGG 4 cut(s) 98, 99, 343, 401
BseMII CTCAG 8 cut(s) 113, 297, 456, 572, 608, 650, 1014, 1103
BseNI ACTGG 3 cut(s) 93, 337, 1106
BseRI GAGGAG 1 cut(s) 510
BseXI GCAGC 1 cut(s) 433
BseYI CCCAGC 2 cut(s) 822, 1047
Bsh1236I CGCG 2 cut(s) 483, 1067
BshFI GGCC 2 cut(s) 76, 226
BshNI GGYRCC 1 cut(s) 955
BsiHKAI GWGCWC 1 cut(s) 999
BsiHKCI CYCGRG 2 cut(s) 77, 962
BsiSI CCGG 3 cut(s) 38, 52, 243
BslFI GGGAC 1 cut(s) 31
BslI CCNNNNNNNGG 4 cut(s) 98, 99, 343, 401
BsmAI GTCTC 1 cut(s) 384
BsmFI GGGAC 1 cut(s) 31
BsnI GGCC 2 cut(s) 76, 226
Bso31I GGTCTC 1 cut(s) 384
BsoBI CYCGRG 2 cut(s) 77, 962
Bsp1286I GDGCHC 1 cut(s) 999
Bsp143I GATC 4 cut(s) 384, 784, 949, 1129
Bsp19I CCATGG 1 cut(s) 362
BspACI CCGC 6 cut(s) 43, 49, 60, 106, 483, 1137
BspANI GGCC 2 cut(s) 76, 226
BspCNI CTCAG 8 cut(s) 114, 298, 457, 571, 607, 651, 1013, 1102
BspFNI CGCG 2 cut(s) 483, 1067
BspLI GGNNCC 2 cut(s) 47, 957
BspMAI CTGCAG 1 cut(s) 439
BspPI GGATC 2 cut(s) 379, 957
BspT107I GGYRCC 1 cut(s) 955
BspTNI GGTCTC 1 cut(s) 384
BsrFI RCCGGY 2 cut(s) 37, 51
BsrI ACTGG 3 cut(s) 93, 337, 1106
BssAI RCCGGY 2 cut(s) 37, 51
BssECI CCNNGG 3 cut(s) 362, 395, 963
BssMI GATC 4 cut(s) 384, 784, 949, 1129
BssSI CACGAG 2 cut(s) 261, 522
BssT1I CCWWGG 2 cut(s) 362, 395
Bst2BI CACGAG 2 cut(s) 261, 522
Bst2UI CCWGG 2 cut(s) 170, 223
Bst4CI ACNGT 3 cut(s) 900, 987, 1079
Bst6I CTCTTC 1 cut(s) 259
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 3 cut(s) 53, 303, 356
BstDEI CTNAG 8 cut(s) 122, 306, 465, 558, 594, 659, 1000, 1089
BstDSI CCRYGG 1 cut(s) 362
BstF5I GGATG 4 cut(s) 676, 857, 997, 1099
BstFNI CGCG 2 cut(s) 483, 1067
BstH2I RGCGCY 2 cut(s) 38, 361
BstHHI GCGC 3 cut(s) 37, 360, 658
BstKTI GATC 4 cut(s) 387, 787, 952, 1132
BstMAI GTCTC 1 cut(s) 384
BstMBI GATC 4 cut(s) 384, 784, 949, 1129
BstMWI GCNNNNNNNGC 5 cut(s) 115, 239, 443, 452, 461
BstNI CCWGG 2 cut(s) 170, 223
BstNSI RCATGY 1 cut(s) 706
BstSCI CCNGG 2 cut(s) 168, 221
BstSFI CTRYAG 1 cut(s) 435
BstUI CGCG 2 cut(s) 483, 1067
BstV1I GCAGC 1 cut(s) 433
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 2 cut(s) 384, 949
BstYI RGATCY 2 cut(s) 384, 949
BsuI GTATCC 1 cut(s) 692
BsuRI GGCC 2 cut(s) 76, 226
BtgI CCRYGG 1 cut(s) 362
BtsCI GGATG 4 cut(s) 676, 857, 997, 1099
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 6 cut(s) 432, 734, 896, 983, 1065, 1113
Cac8I GCNNGC 3 cut(s) 53, 303, 356
CaiI CAGNNNCTG 1 cut(s) 952
CfoI GCGC 3 cut(s) 37, 360, 658
Cfr10I RCCGGY 2 cut(s) 37, 51
Cfr13I GGNCC 5 cut(s) 45, 75, 126, 225, 1111
CseI GACGC 1 cut(s) 1073
Csp6I GTAC 2 cut(s) 340, 1018
CviAII CATG 2 cut(s) 363, 703
CviQI GTAC 2 cut(s) 340, 1018
DdeI CTNAG 8 cut(s) 122, 306, 465, 558, 594, 659, 1000, 1089
DpnI GATC 4 cut(s) 386, 786, 951, 1131
DpnII GATC 4 cut(s) 384, 784, 949, 1129
Eam1104I CTCTTC 1 cut(s) 259
EarI CTCTTC 1 cut(s) 259
Ecl136II GAGCTC 1 cut(s) 997
Eco130I CCWWGG 2 cut(s) 362, 395
Eco24I GRGCYC 1 cut(s) 999
Eco31I GGTCTC 1 cut(s) 384
Eco47I GGWCC 3 cut(s) 45, 126, 1111
Eco53kI GAGCTC 1 cut(s) 997
Eco57I CTGAAG 2 cut(s) 531, 1041
Eco88I CYCGRG 2 cut(s) 77, 962
EcoICRI GAGCTC 1 cut(s) 997
EcoO109I RGGNCCY 1 cut(s) 225
EcoRI GAATTC 2 cut(s) 348, 477
EcoRII CCWGG 2 cut(s) 168, 221
EcoT14I CCWWGG 2 cut(s) 362, 395
EcoT38I GRGCYC 1 cut(s) 999
ErhI CCWWGG 2 cut(s) 362, 395
FaeI CATG 2 cut(s) 366, 706
FaiI YATR 6 cut(s) 32, 364, 459, 704, 878, 1033
FalI AAGNNNNNCTT 2 cut(s) 566, 598
FaqI GGGAC 1 cut(s) 31
FatI CATG 2 cut(s) 362, 702
FauI CCCGC 2 cut(s) 56, 476
Fnu4HI GCNGC 2 cut(s) 107, 447
FokI GGATG 4 cut(s) 683, 844, 1004, 1106
FriOI GRGCYC 1 cut(s) 999
Fsp4HI GCNGC 2 cut(s) 107, 447
GlaI GCGC 3 cut(s) 36, 359, 657
GluI GCNGC 2 cut(s) 107, 447
GsaI CCCAGC 2 cut(s) 826, 1051
GsuI CTGGAG 3 cut(s) 399, 831, 926
HaeII RGCGCY 2 cut(s) 38, 361
HaeIII GGCC 2 cut(s) 76, 226
HapII CCGG 3 cut(s) 38, 52, 243
HgaI GACGC 1 cut(s) 1073
HhaI GCGC 3 cut(s) 37, 360, 658
Hin1II CATG 2 cut(s) 366, 706
Hin6I GCGC 3 cut(s) 35, 358, 656
HinP1I GCGC 3 cut(s) 35, 358, 656
HincII GTYRAC 1 cut(s) 139
HindII GTYRAC 1 cut(s) 139
HindIII AAGCTT 1 cut(s) 1152
HinfI GANTC 6 cut(s) 185, 218, 632, 844, 911, 1052
HpaII CCGG 3 cut(s) 38, 52, 243
HphI GGTGA 2 cut(s) 49, 1091
Hpy166II GTNNAC 6 cut(s) 139, 196, 628, 708, 1063, 1111
Hpy188III TCNNGA 8 cut(s) 112, 668, 848, 905, 962, 975, 1037, 1091
Hpy8I GTNNAC 6 cut(s) 139, 196, 628, 708, 1063, 1111
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 2 cut(s) 490, 721
HpyCH4III ACNGT 3 cut(s) 900, 987, 1079
HpyCH4IV ACGT 1 cut(s) 472
HpyCH4V TGCA 6 cut(s) 317, 437, 449, 533, 734, 1085
HpyF10VI GCNNNNNNNGC 5 cut(s) 115, 239, 443, 452, 461
HpyF3I CTNAG 8 cut(s) 122, 306, 465, 558, 594, 659, 1000, 1089
HpySE526I ACGT 1 cut(s) 472
Hsp92II CATG 2 cut(s) 366, 706
HspAI GCGC 3 cut(s) 35, 358, 656
KroI GCCGGC 1 cut(s) 51
KroNI GCCGGC 1 cut(s) 53
Kzo9I GATC 4 cut(s) 384, 784, 949, 1129
LmnI GCTCC 2 cut(s) 1044, 1119
Lsp1109I GCAGC 1 cut(s) 433
LweI GCATC 2 cut(s) 451, 1072
MaeII ACGT 1 cut(s) 472
MalI GATC 4 cut(s) 386, 786, 951, 1131
MboI GATC 4 cut(s) 384, 784, 949, 1129
MfeI CAATTG 1 cut(s) 1140
MflI RGATCY 2 cut(s) 384, 949
MhlI GDGCHC 1 cut(s) 999
MluCI AATT 7 cut(s) 348, 477, 502, 563, 619, 970, 1140
MluI ACGCGT 1 cut(s) 1065
MlyI GAGTC 3 cut(s) 194, 626, 838
MmeI TCCRAC 1 cut(s) 969
MroNI GCCGGC 1 cut(s) 51
MseI TTAA 2 cut(s) 501, 1159
MspI CCGG 3 cut(s) 38, 52, 243
MspR9I CCNGG 2 cut(s) 170, 223
MunI CAATTG 1 cut(s) 1140
MvaI CCWGG 2 cut(s) 170, 223
MvnI CGCG 2 cut(s) 483, 1067
MwoI GCNNNNNNNGC 5 cut(s) 115, 239, 443, 452, 461
NaeI GCCGGC 1 cut(s) 53
NcoI CCATGG 1 cut(s) 362
NdeII GATC 4 cut(s) 384, 784, 949, 1129
NgoMIV GCCGGC 1 cut(s) 51
NlaIII CATG 2 cut(s) 366, 706
NlaIV GGNNCC 2 cut(s) 47, 957
NspI RCATGY 1 cut(s) 706
PciI ACATGT 1 cut(s) 702
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PdiI GCCGGC 1 cut(s) 53
PfeI GAWTC 3 cut(s) 218, 911, 1052
PflFI GACNNNGTC 1 cut(s) 985
PfoI TCCNGGA 1 cut(s) 168
PkrI GCNGC 2 cut(s) 108, 448
PleI GAGTC 3 cut(s) 193, 626, 838
PpsI GAGTC 3 cut(s) 193, 626, 838
Ppu21I YACGTR 1 cut(s) 473
PscI ACATGT 1 cut(s) 702
Psp124BI GAGCTC 1 cut(s) 999
Psp6I CCWGG 2 cut(s) 168, 221
PspFI CCCAGC 2 cut(s) 822, 1047
PspGI CCWGG 2 cut(s) 168, 221
PspN4I GGNNCC 2 cut(s) 47, 957
PspPI GGNCC 5 cut(s) 45, 75, 126, 225, 1111
PstI CTGCAG 1 cut(s) 439
PstNI CAGNNNCTG 1 cut(s) 952
PsuI RGATCY 2 cut(s) 384, 949
PsyI GACNNNGTC 1 cut(s) 985
RsaI GTAC 2 cut(s) 341, 1019
RsaNI GTAC 2 cut(s) 340, 1018
SacI GAGCTC 1 cut(s) 999
SaqAI TTAA 2 cut(s) 501, 1159
SatI GCNGC 2 cut(s) 107, 447
Sau3AI GATC 4 cut(s) 384, 784, 949, 1129
Sau96I GGNCC 5 cut(s) 45, 75, 126, 225, 1111
ScaI AGTACT 1 cut(s) 1019
SchI GAGTC 3 cut(s) 194, 626, 838
ScrFI CCNGG 2 cut(s) 170, 223
SduI GDGCHC 1 cut(s) 999
SfaNI GCATC 2 cut(s) 451, 1072
SfcI CTRYAG 1 cut(s) 435
SgrAI CRCCGGYG 1 cut(s) 37
SinI GGWCC 3 cut(s) 45, 126, 1111
SmlI CTYRAG 1 cut(s) 634
SmoI CTYRAG 1 cut(s) 634
Sse9I AATT 7 cut(s) 348, 477, 502, 563, 619, 970, 1140
SsiI CCGC 6 cut(s) 43, 49, 60, 106, 483, 1137
SstI GAGCTC 1 cut(s) 999
StyD4I CCNGG 2 cut(s) 168, 221
StyI CCWWGG 2 cut(s) 362, 395
TaaI ACNGT 3 cut(s) 900, 987, 1079
TaiI ACGT 1 cut(s) 475
TaqI TCGA 3 cut(s) 113, 156, 839
TasI AATT 7 cut(s) 348, 477, 502, 563, 619, 970, 1140
TatI WGTACW 2 cut(s) 339, 1017
TauI GCSGC 1 cut(s) 109
TfiI GAWTC 3 cut(s) 218, 911, 1052
Tru1I TTAA 2 cut(s) 501, 1159
Tru9I TTAA 2 cut(s) 501, 1159
TscAI CASTG 6 cut(s) 439, 741, 903, 990, 1065, 1113
TseI GCWGC 1 cut(s) 446
TspDTI ATGAA 8 cut(s) 19, 222, 687, 701, 738, 858, 947, 1028
TspGWI ACGGA 2 cut(s) 736, 850
TspRI CASTG 6 cut(s) 439, 741, 903, 990, 1065, 1113
Tth111I GACNNNGTC 1 cut(s) 985
VpaK11BI GGWCC 3 cut(s) 45, 126, 1111
XapI RAATTY 2 cut(s) 348, 477
XceI RCATGY 1 cut(s) 706
XcmI CCANNNNNNNNNTGG 2 cut(s) 369, 1113
ZrmI AGTACT 1 cut(s) 1019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.