Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0001610

Physical Location & Seq

Genomic Coordinates Forward (+)

8886801 .. 8891091

Gene Structure 4291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g10800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGCATCCTCGCCTGAAAAAACTAGTCTTGTCAAAACGACTTAGGGTAGAGTCGTCTGATTCCTGCAATTTCGATTCCACTGAAACACGAACTCCCTCTGCGCTCTCTGTCTCCGCAGCACACTGCCTTTTTCCCACCAAAATCCCATCTCAAAGTCCCCGAATTTCGAACCCGAACATGCACGGAGAAGACGGGGACCGTCTAAAGGAGAGGATGAAAAACGACTGCAGGAAGATCATGGAGAGCATCAACGCAATGTGTTTCGAGAACCTGAACGACGAGCAGGTGCACTCGCTGGTGCTGATGCGGGAAATCGCGCGCGGAGTTTTGACCAATCGGGTCGAGAAGGTAACCTCCAGCGACGTCAAAAAGGCCTTGTCTTCGAGCATTGAGAAGATGGTGGATTCTTGTAGGGAGGTGGCGAACATTTTGGGTGGGATTTCGTGTGATGGGTTGGGTACGGAGGATGTCAAAAAGGTGACAAGGATGAAGGAGATTGCAATGGGGATTGTGAGCAAACGACCCAGAGTTGTAACCATGCTGGGTTGTGAGCCTGGTGAACTGGGTGATGGAGCTGAAGATTATGATATAAGTGAAAAGAATGTGTGGGGTGGAGGGATAGAAAGCGAGTTTAGAAATGAGGATGGGACCCCAAGTGAGTTGGGGGAAAGCCCGGTTTATGGGGTAACACACGCGTCCAATGGGAATTCCCAGTTGGGAGGACTAGAGTCTGAGAGGACGATTGGTGAAGATATGTATGCAGCAGTGGAAGCAGTTTCCAAAGATGAAGACGGTTGGACAGCGATGGGAGGAAGTGTTGCGGACGCGATGATGAATACTGGCCATGAGGAGCACTTTGGCAGGGTTGAAGGGTTGATGTTCGAAGATGATTGCCTCGTGGTGGTAGCTGATGAGTTTGGAAGTGAAGATTGTCAAGTTGGGGTGCAGAATTCTTTGTCACAGTCAACCCTTCAGCACCCATTTTTGTGGCCTTCAGATGACAGGATAAACTTAGAGTGGGTTTGCGGCATGATGTCTGCTCTTGAGCAGTCACCAGAGAATTTTCAATCAGTGTTGTCAGTTTCTTTGGTGGACAAATTGATTGATACTGCTTCAAGTATCCTTTGCAAGGAGCCGAACTGTGTGGAAGTTGATTGTCATAAAGAGGATTCAAGAGTTGTTGTAGTTGGTGACATTAATGGACAGTTTCGTGATTTACTCCATCTCTTTGAACATGCTGGGTTTCCCTCTGACAACCAATTTTATGTTTTCAATGGAAATTATGTTAATAGAGGAGCATCGGGCTTAGATGTGTTTATGGTGTTGTTGGCTTGGAAGGTCTTGATGCCTTCTAGAGTATATCTACTTCGTGGGAACCAGGAATCTAAATTTTGCACATCTATTTGGGGTTTTGAGGAAGAGGTTAAGGCTAAACTAGGTGATCAATCGAGTTTTGGTGAATATGTCTATAATAAATGTCTTGACTGCTTTAAAGAGCTCCCTTTGGCTTCGATCATAGCCAATTGTGTATATACCACCCATGGAGGTCTTTTTCGGAGCATGTGTACTACCCCTTCGAGAAGATCCAAAAGAAAGAGGGAAGAAAAGCTGGAACTAGGTTGTTTAGAAGATTTATCTAAAGTTGAAAGATCTCTTATAGATGCTCCAGATGAAGGACCAAATATATTACTGACTGATGTGCTATGGTCTGATCCATCAAAGGAAGATGGTTTAGTTGAAAAAACATTTCGAGAACGGGGTCTTTGGTGGGGTCCTGATTGTACAGAGGCTTTTCTAAAACAATCCAAGTTAAAGTTGATCATTCGATCACATGAAGGCCCAGATGTAAGGGCAGATCAAGATGAATTAGGTGACATGCTAAGTGGGTACAGTTTGGATCATGCTGGAGACTCGGGGAAACTGTACACACTGTTTAGTGCTGCTAATTATTCGCAGCTCGATAAGAAGAGGTATAACAATGAAGGGGTCTATGCTCTTTTGGAGCCTCCTAATTTTCAATCTCCTTCCTTCCACTCATTCATGGCTGCAGGGAGGCCAAAGGTAGATGCTTATGTTGATAATGGTGACAAAGATTTGGTCGTTGTTGGTGAACCAGACTTGGCATCAGTGTCAGCAACTGGTGCCACCTCCTTGTCTCAAACATCTGTTCCACCTGGTAGTAGCTCTGAGGTTAACTTTGAGGCGTTGGGCATTTCTAATCCCCCTTCTTGCAGTGTTATGGTGCCAGATGATGCAGGTGGCACCCAACTTGTCCAAGTTCCAAAGGCTCCTGTGGTGGAAGGATTGCCTCTGCCTTCTGACTTACAGGAGCCGCACAAAGCTGCTTATAAGTATTTCTTGGAGCTAATTGCTGGTCTGAAGCATATGATTTCAACAAGGGAAGTTCAGAGTGGGACGAATGAGCCAACCATGCAAAAGAGAGCTTGGCATCAAATAGAGACGCCACAAGAGGTCAACTTGAAACCTGAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009314 GO:0009408 GO:0009416 GO:0009628 GO:0009637 GO:0009785 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0030522 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0104004 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 map04010

Pfam Domains

Protein Families

Metallophos

Protein Analysis

832

Amino Acids

91.56

Weight (kDa)

4.88

Isoelectric Point (pI)

47.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001610)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720 FvH4_6g33720
malus_domestica	MD09G1191500.v1.1
prunus_persica	Prupe.3G047600_v2.0.a1
pyrus_communis	pycom09g10800
rosa_chinensis	RchiOBHm_Chr2g0143611
rosa_laevigata	RLG00000020051 RLG00000033709
rosa_multiflora	Rmu_co8237331.1_g000001 Rmu_sc0002412.1_g000001 Rmu_sc0004340.1_g000029 Rmu_sc0031780.1_g000001
rosa_roxburghii	Rroxscaffold_2G00101600 Rroxscaffold_4G00304410
rosa_rugosa	Rorug02G0384400 Rorug02G0384400 Rorug02G0384400 Rorug02G0384400
rosa_samantha	Rh1BG199600 Rh1DG227400 Rh2AG436200 Rh2BG443800 Rh2CG422400 Rh2DG454200
rosa_wichuraiana	Rw2G035550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2349
AarI	CACCTGC	2 cut(s)	274, 2246
AatII	GACGTC	1 cut(s)	366
Acc36I	ACCTGC	2 cut(s)	274, 2246
AccB1I	GGYRCC	3 cut(s)	2141, 2242, 2261
AccII	CGCG	5 cut(s)	317, 319, 321, 695, 827
AciI	CCGC	6 cut(s)	114, 307, 321, 821, 1026, 2333
AclWI	GGATC	3 cut(s)	1578, 1706, 1905
AcoI	YGGCCR	1 cut(s)	841
AcsI	RAATTY	5 cut(s)	162, 706, 949, 1060, 1388
AcuI	CTGAAG	4 cut(s)	597, 956, 978, 2399
AcyI	GRCGYC	2 cut(s)	363, 2462
AfaI	GTAC	5 cut(s)	460, 1567, 1783, 1889, 1925
AfiI	CCNNNNNNNGG	5 cut(s)	205, 680, 901, 1129, 1673
AflIII	ACRYGT	1 cut(s)	693
AhlI	ACTAGT	1 cut(s)	22
AjnI	CCWGG	3 cut(s)	553, 1377, 2173
AjuI	GAANNNNNNNTTGG	2 cut(s)	698, 730
AluBI	AGCT	9 cut(s)	575, 908, 1498, 1609, 1957, 2184, 2342, 2365, 2444
AluI	AGCT	9 cut(s)	575, 908, 1498, 1609, 1957, 2184, 2342, 2365, 2444
Alw21I	GWGCWC	3 cut(s)	291, 855, 1500
Alw26I	GTCTC	4 cut(s)	115, 1902, 2160, 2453
Alw44I	GTGCAC	1 cut(s)	287
AlwI	GGATC	3 cut(s)	1578, 1706, 1905
AlwNI	CAGNNNCTG	1 cut(s)	2138
Ama87I	CYCGRG	1 cut(s)	1912
AoxI	GGCC	5 cut(s)	372, 841, 989, 1837, 2054
ApaLI	GTGCAC	1 cut(s)	287
ApeKI	GCWGC	6 cut(s)	116, 761, 1940, 1954, 2045, 2342
ApoI	RAATTY	5 cut(s)	162, 706, 949, 1060, 1388
ArsI	GACNNNNNNTTYG	2 cut(s)	2082, 2114
AseI	ATTAAT	1 cut(s)	1197
AspLEI	GCGC	3 cut(s)	103, 319, 321
AspS9I	GGNCC	5 cut(s)	196, 648, 1676, 1772, 1838
AsuC2I	CCSGG	1 cut(s)	674
AsuII	TTCGAA	2 cut(s)	167, 882
AvaI	CYCGRG	1 cut(s)	1912
AvaII	GGWCC	4 cut(s)	196, 648, 1676, 1772
AxyI	CCTNAGG	1 cut(s)	2487
BaeGI	GKGCMC	1 cut(s)	291
BalI	TGGCCA	1 cut(s)	843
BanI	GGYRCC	3 cut(s)	2141, 2242, 2261
BanII	GRGCYC	1 cut(s)	1500
BarI	GAAGNNNNNNTAC	4 cut(s)	1350, 1382, 1558, 1590
BauI	CACGAG	1 cut(s)	896
BbsI	GAAGAC	3 cut(s)	195, 372, 795
Bbv12I	GWGCWC	3 cut(s)	291, 855, 1500
BbvI	GCAGC	6 cut(s)	128, 773, 1927, 1966, 2032, 2329
BccI	CCATC	9 cut(s)	154, 391, 443, 563, 638, 799, 1230, 1721, 1723
BciT130I	CCWGG	3 cut(s)	555, 1379, 2175
BciVI	GTATCC	1 cut(s)	1130
BclI	TGATCA	2 cut(s)	1441, 1818
BcnI	CCSGG	1 cut(s)	674
BcoDI	GTCTC	4 cut(s)	115, 1902, 2160, 2453
BcuI	ACTAGT	1 cut(s)	22
BfaI	CTAG	5 cut(s)	23, 725, 1353, 1436, 1616
BfmI	CTRYAG	2 cut(s)	226, 2046
BfuAI	ACCTGC	2 cut(s)	274, 2246
BfuI	GTATCC	1 cut(s)	1130
BglII	AGATCT	1 cut(s)	1649
BisI	GCNGC	8 cut(s)	117, 762, 1027, 1941, 1955, 2046, 2333, 2343
BlsI	GCNGC	8 cut(s)	118, 763, 1028, 1942, 1956, 2047, 2334, 2344
Bme1390I	CCNGG	4 cut(s)	555, 674, 1379, 2175
Bme18I	GGWCC	4 cut(s)	196, 648, 1676, 1772
BmeT110I	CYCGRG	1 cut(s)	1912
BmgT120I	GGNCC	5 cut(s)	196, 648, 1676, 1772, 1838
BmrFI	CCNGG	4 cut(s)	555, 674, 1379, 2175
BmrI	ACTGGG	2 cut(s)	572, 706
BmuI	ACTGGG	2 cut(s)	572, 706
BoxI	GACNNNNGTC	1 cut(s)	727
BpiI	GAAGAC	3 cut(s)	195, 372, 795
BpmI	CTGGAG	3 cut(s)	340, 1650, 1926
Bpu14I	TTCGAA	2 cut(s)	167, 882
BpuEI	CTTGAG	1 cut(s)	1064
BpuMI	CCSGG	1 cut(s)	674
BsaHI	GRCGYC	2 cut(s)	363, 2462
BsaJI	CCNNGG	1 cut(s)	1540
BsaXI	ACNNNNNCTCC	6 cut(s)	76, 106, 801, 831, 1549, 1579
Bsc4I	CCNNNNNNNGG	5 cut(s)	205, 680, 901, 1129, 1673
Bse1I	ACTGG	4 cut(s)	567, 712, 844, 2143
Bse21I	CCTNAGG	1 cut(s)	2487
Bse3DI	GCAATG	2 cut(s)	261, 507
BseBI	CCWGG	3 cut(s)	555, 1379, 2175
BseDI	CCNNGG	1 cut(s)	1540
BseGI	GGATG	5 cut(s)	4, 219, 472, 492, 649
BseLI	CCNNNNNNNGG	5 cut(s)	205, 680, 901, 1129, 1673
BseMI	GCAATG	2 cut(s)	261, 507
BseMII	CTCAG	3 cut(s)	723, 2178, 2478
BseNI	ACTGG	4 cut(s)	567, 712, 844, 2143
BsePI	GCGCGC	1 cut(s)	317
BseRI	GAGGAG	2 cut(s)	863, 1308
BseSI	GKGCMC	1 cut(s)	291
BseXI	GCAGC	6 cut(s)	128, 773, 1927, 1966, 2032, 2329
BseYI	CCCAGC	2 cut(s)	541, 1238
BsgI	GTGCAG	1 cut(s)	965
Bsh1236I	CGCG	5 cut(s)	317, 319, 321, 695, 827
BshFI	GGCC	5 cut(s)	374, 843, 991, 1839, 2056
BshNI	GGYRCC	3 cut(s)	2141, 2242, 2261
BsiHKAI	GWGCWC	3 cut(s)	291, 855, 1500
BsiHKCI	CYCGRG	1 cut(s)	1912
BsiSI	CCGG	1 cut(s)	674
BslFI	GGGAC	4 cut(s)	141, 209, 661, 2428
BslI	CCNNNNNNNGG	5 cut(s)	205, 680, 901, 1129, 1673
BsmAI	GTCTC	4 cut(s)	115, 1902, 2160, 2453
BsmBI	CGTCTC	1 cut(s)	2453
BsmFI	GGGAC	4 cut(s)	141, 209, 661, 2428
BsnI	GGCC	5 cut(s)	374, 843, 991, 1839, 2056
BsoBI	CYCGRG	1 cut(s)	1912
Bsp119I	TTCGAA	2 cut(s)	167, 882
Bsp1286I	GDGCHC	3 cut(s)	291, 855, 1500
Bsp1407I	TGTACA	2 cut(s)	1781, 1923
Bsp19I	CCATGG	1 cut(s)	1540
BspACI	CCGC	6 cut(s)	114, 307, 321, 821, 1026, 2333
BspANI	GGCC	5 cut(s)	374, 843, 991, 1839, 2056
BspCNI	CTCAG	3 cut(s)	724, 2179, 2479
BspFNI	CGCG	5 cut(s)	317, 319, 321, 695, 827
BspMAI	CTGCAG	2 cut(s)	230, 2050
BspMI	ACCTGC	2 cut(s)	274, 2246
BspPI	GGATC	3 cut(s)	1578, 1706, 1905
BspT104I	TTCGAA	2 cut(s)	167, 882
BspT107I	GGYRCC	3 cut(s)	2141, 2242, 2261
BsrDI	GCAATG	2 cut(s)	261, 507
BsrGI	TGTACA	2 cut(s)	1781, 1923
BsrI	ACTGG	4 cut(s)	567, 712, 844, 2143
BssECI	CCNNGG	1 cut(s)	1540
BssHII	GCGCGC	1 cut(s)	317
BssNI	GRCGYC	2 cut(s)	363, 2462
BssSI	CACGAG	1 cut(s)	896
BssT1I	CCWWGG	1 cut(s)	1540
Bst2BI	CACGAG	1 cut(s)	896
Bst2UI	CCWGG	3 cut(s)	555, 1379, 2175
Bst4CI	ACNGT	8 cut(s)	200, 794, 963, 1142, 1206, 1892, 1923, 1932
Bst6I	CTCTTC	2 cut(s)	1413, 1961
BstACI	GRCGYC	2 cut(s)	363, 2462
BstAPI	GCANNNNNTGC	1 cut(s)	2141
BstAUI	TGTACA	2 cut(s)	1781, 1923
BstBI	TTCGAA	2 cut(s)	167, 882
BstC8I	GCNNGC	1 cut(s)	319
BstDEI	CTNAG	7 cut(s)	41, 732, 1012, 1306, 1880, 2187, 2487
BstDSI	CCRYGG	1 cut(s)	1540
BstEII	GGTNACC	1 cut(s)	349
BstENI	CCTNNNNNAGG	1 cut(s)	1127
BstF5I	GGATG	5 cut(s)	4, 219, 472, 492, 649
BstFNI	CGCG	5 cut(s)	317, 319, 321, 695, 827
BstHHI	GCGC	3 cut(s)	103, 319, 321
BstMAI	GTCTC	4 cut(s)	115, 1902, 2160, 2453
BstMWI	GCNNNNNNNGC	3 cut(s)	770, 2141, 2431
BstNI	CCWGG	3 cut(s)	555, 1379, 2175
BstNSI	RCATGY	4 cut(s)	181, 1238, 1564, 1879
BstPAI	GACNNNNGTC	1 cut(s)	727
BstPI	GGTNACC	1 cut(s)	349
BstSCI	CCNGG	4 cut(s)	553, 672, 1377, 2173
BstSFI	CTRYAG	2 cut(s)	226, 2046
BstSLI	GKGCMC	1 cut(s)	291
BstUI	CGCG	5 cut(s)	317, 319, 321, 695, 827
BstV1I	GCAGC	6 cut(s)	128, 773, 1927, 1966, 2032, 2329
BstV2I	GAAGAC	3 cut(s)	195, 372, 795
BstX2I	RGATCY	2 cut(s)	1583, 1649
BstXI	CCANNNNNNTGG	1 cut(s)	987
BstYI	RGATCY	2 cut(s)	1583, 1649
Bsu36I	CCTNAGG	1 cut(s)	2487
BsuI	GTATCC	1 cut(s)	1130
BsuRI	GGCC	5 cut(s)	374, 843, 991, 1839, 2056
BtgI	CCRYGG	1 cut(s)	1540
BtgZI	GCGATG	2 cut(s)	818, 842
BtsCI	GGATG	5 cut(s)	4, 219, 472, 492, 649
BtsI	GCAGTG	3 cut(s)	121, 771, 2239
BtsIMutI	CAGTG	7 cut(s)	78, 121, 771, 1077, 1928, 2133, 2239
BveI	ACCTGC	2 cut(s)	274, 2246
Cac8I	GCNNGC	1 cut(s)	319
CaiI	CAGNNNCTG	1 cut(s)	2138
CfoI	GCGC	3 cut(s)	103, 319, 321
Cfr13I	GGNCC	5 cut(s)	196, 648, 1676, 1772, 1838
CseI	GACGC	3 cut(s)	684, 833, 2470
CsiI	ACCWGGT	1 cut(s)	2173
Csp6I	GTAC	5 cut(s)	459, 1566, 1782, 1888, 1924
CviQI	GTAC	5 cut(s)	459, 1566, 1782, 1888, 1924
DdeI	CTNAG	7 cut(s)	41, 732, 1012, 1306, 1880, 2187, 2487
DraI	TTTAAA	1 cut(s)	1492
EaeI	YGGCCR	1 cut(s)	841
Eam1104I	CTCTTC	2 cut(s)	1413, 1961
EarI	CTCTTC	2 cut(s)	1413, 1961
Ecl136II	GAGCTC	1 cut(s)	1498
Eco130I	CCWWGG	1 cut(s)	1540
Eco147I	AGGCCT	1 cut(s)	374
Eco24I	GRGCYC	1 cut(s)	1500
Eco47I	GGWCC	4 cut(s)	196, 648, 1676, 1772
Eco53kI	GAGCTC	1 cut(s)	1498
Eco57I	CTGAAG	4 cut(s)	597, 956, 978, 2399
Eco81I	CCTNAGG	1 cut(s)	2487
Eco88I	CYCGRG	1 cut(s)	1912
Eco91I	GGTNACC	1 cut(s)	349
EcoICRI	GAGCTC	1 cut(s)	1498
EcoNI	CCTNNNNNAGG	1 cut(s)	1127
EcoO109I	RGGNCCY	2 cut(s)	648, 1772
EcoO65I	GGTNACC	1 cut(s)	349
EcoRI	GAATTC	2 cut(s)	706, 949
EcoRII	CCWGG	3 cut(s)	553, 1377, 2173
EcoT14I	CCWWGG	1 cut(s)	1540
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	1500
ErhI	CCWWGG	1 cut(s)	1540
Esp3I	CGTCTC	1 cut(s)	2453
FalI	AAGNNNNNCTT	2 cut(s)	2342, 2374
FaqI	GGGAC	4 cut(s)	141, 209, 661, 2428
FauI	CCCGC	1 cut(s)	300
FauNDI	CATATG	1 cut(s)	2385
FbaI	TGATCA	2 cut(s)	1441, 1818
Fnu4HI	GCNGC	8 cut(s)	117, 762, 1027, 1941, 1955, 2046, 2333, 2343
FokI	GGATG	4 cut(s)	226, 479, 499, 656
FriOI	GRGCYC	1 cut(s)	1500
Fsp4HI	GCNGC	8 cut(s)	117, 762, 1027, 1941, 1955, 2046, 2333, 2343
FspBI	CTAG	5 cut(s)	23, 725, 1353, 1436, 1616
GlaI	GCGC	3 cut(s)	102, 318, 320
GluI	GCNGC	8 cut(s)	117, 762, 1027, 1941, 1955, 2046, 2333, 2343
GsaI	CCCAGC	2 cut(s)	545, 1242
GsuI	CTGGAG	3 cut(s)	340, 1650, 1926
HaeIII	GGCC	5 cut(s)	374, 843, 991, 1839, 2056
HapII	CCGG	1 cut(s)	674
HgaI	GACGC	3 cut(s)	684, 833, 2470
HhaI	GCGC	3 cut(s)	103, 319, 321
Hin1I	GRCGYC	2 cut(s)	363, 2462
Hin6I	GCGC	3 cut(s)	101, 317, 319
HinP1I	GCGC	3 cut(s)	101, 317, 319
HincII	GTYRAC	3 cut(s)	966, 2194, 2476
HindII	GTYRAC	3 cut(s)	966, 2194, 2476
HinfI	GANTC	8 cut(s)	50, 59, 74, 404, 728, 1169, 1382, 1910
HpaI	GTTAAC	1 cut(s)	2194
HpaII	CCGG	1 cut(s)	674
Hpy166II	GTNNAC	9 cut(s)	289, 560, 966, 1093, 1566, 1926, 2111, 2194, 2476
Hpy8I	GTNNAC	9 cut(s)	289, 560, 966, 1093, 1566, 1926, 2111, 2194, 2476
Hpy99I	CGWCG	2 cut(s)	281, 365
HpyCH4III	ACNGT	8 cut(s)	200, 794, 963, 1142, 1206, 1892, 1923, 1932
HpyCH4IV	ACGT	1 cut(s)	363
HpyF10VI	GCNNNNNNNGC	3 cut(s)	770, 2141, 2431
HpyF3I	CTNAG	7 cut(s)	41, 732, 1012, 1306, 1880, 2187, 2487
HpySE526I	ACGT	1 cut(s)	363
Hsp92I	GRCGYC	2 cut(s)	363, 2462
HspAI	GCGC	3 cut(s)	101, 317, 319
KflI	GGGWCCC	1 cut(s)	648
Ksp22I	TGATCA	2 cut(s)	1441, 1818
KspAI	GTTAAC	1 cut(s)	2194
Lsp1109I	GCAGC	6 cut(s)	128, 773, 1927, 1966, 2032, 2329
MabI	ACCWGGT	1 cut(s)	2173
MaeI	CTAG	5 cut(s)	23, 725, 1353, 1436, 1616
MaeII	ACGT	1 cut(s)	363
MaeIII	GTNAC	9 cut(s)	349, 478, 532, 685, 957, 1050, 1190, 1871, 2084
MauBI	CGCGCGCG	1 cut(s)	317
MfeI	CAATTG	1 cut(s)	1522
MflI	RGATCY	2 cut(s)	1583, 1649
MhlI	GDGCHC	3 cut(s)	291, 855, 1500
MlsI	TGGCCA	1 cut(s)	843
MluI	ACGCGT	1 cut(s)	693
MluNI	TGGCCA	1 cut(s)	843
MlyI	GAGTC	3 cut(s)	59, 737, 1904
MmeI	TCCRAC	1 cut(s)	776
Mox20I	TGGCCA	1 cut(s)	843
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	843
MseI	TTAA	6 cut(s)	1197, 1287, 1425, 1491, 1811, 2193
MslI	CAYNNNNRTG	1 cut(s)	985
Msp20I	TGGCCA	1 cut(s)	843
MspI	CCGG	1 cut(s)	674
MspR9I	CCNGG	4 cut(s)	555, 674, 1379, 2175
MunI	CAATTG	1 cut(s)	1522
MvaI	CCWGG	3 cut(s)	555, 1379, 2175
MvnI	CGCG	5 cut(s)	317, 319, 321, 695, 827
MwoI	GCNNNNNNNGC	3 cut(s)	770, 2141, 2431
NciI	CCSGG	1 cut(s)	674
NcoI	CCATGG	1 cut(s)	1540
NdeI	CATATG	1 cut(s)	2385
NmuCI	GTSAC	6 cut(s)	478, 957, 1050, 1190, 1871, 2084
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	4 cut(s)	181, 1238, 1564, 1879
NspV	TTCGAA	2 cut(s)	167, 882
PaqCI	CACCTGC	2 cut(s)	274, 2246
PauI	GCGCGC	1 cut(s)	317
PceI	AGGCCT	1 cut(s)	374
PfeI	GAWTC	5 cut(s)	59, 74, 404, 1169, 1382
PkrI	GCNGC	8 cut(s)	118, 763, 1028, 1942, 1956, 2047, 2334, 2344
PleI	GAGTC	3 cut(s)	58, 736, 1904
PpsI	GAGTC	3 cut(s)	58, 736, 1904
PpuMI	RGGWCCY	2 cut(s)	648, 1772
PshAI	GACNNNNGTC	1 cut(s)	727
PshBI	ATTAAT	1 cut(s)	1197
PsiI	TTATAA	1 cut(s)	2349
Psp124BI	GAGCTC	1 cut(s)	1500
Psp5II	RGGWCCY	2 cut(s)	648, 1772
Psp6I	CCWGG	3 cut(s)	553, 1377, 2173
PspEI	GGTNACC	1 cut(s)	349
PspFI	CCCAGC	2 cut(s)	541, 1238
PspGI	CCWGG	3 cut(s)	553, 1377, 2173
PspPI	GGNCC	5 cut(s)	196, 648, 1676, 1772, 1838
PspPPI	RGGWCCY	2 cut(s)	648, 1772
PstI	CTGCAG	2 cut(s)	230, 2050
PstNI	CAGNNNCTG	1 cut(s)	2138
PsuI	RGATCY	2 cut(s)	1583, 1649
PteI	GCGCGC	1 cut(s)	317
RsaI	GTAC	5 cut(s)	460, 1567, 1783, 1889, 1925
RsaNI	GTAC	5 cut(s)	459, 1566, 1782, 1888, 1924
RseI	CAYNNNNRTG	1 cut(s)	985
SacI	GAGCTC	1 cut(s)	1500
SaqAI	TTAA	6 cut(s)	1197, 1287, 1425, 1491, 1811, 2193
SatI	GCNGC	8 cut(s)	117, 762, 1027, 1941, 1955, 2046, 2333, 2343
Sau96I	GGNCC	5 cut(s)	196, 648, 1676, 1772, 1838
SchI	GAGTC	3 cut(s)	59, 737, 1904
ScrFI	CCNGG	4 cut(s)	555, 674, 1379, 2175
SduI	GDGCHC	3 cut(s)	291, 855, 1500
SexAI	ACCWGGT	1 cut(s)	2173
SfcI	CTRYAG	2 cut(s)	226, 2046
SfuI	TTCGAA	2 cut(s)	167, 882
SinI	GGWCC	4 cut(s)	196, 648, 1676, 1772
SmiMI	CAYNNNNRTG	1 cut(s)	985
SmlI	CTYRAG	1 cut(s)	1043
SmoI	CTYRAG	1 cut(s)	1043
SpeI	ACTAGT	1 cut(s)	22
SseBI	AGGCCT	1 cut(s)	374
SsiI	CCGC	6 cut(s)	114, 307, 321, 821, 1026, 2333
SspMI	CTAG	5 cut(s)	23, 725, 1353, 1436, 1616
SstI	GAGCTC	1 cut(s)	1500
StuI	AGGCCT	1 cut(s)	374
StyD4I	CCNGG	4 cut(s)	553, 672, 1377, 2173
StyI	CCWWGG	1 cut(s)	1540
TaaI	ACNGT	8 cut(s)	200, 794, 963, 1142, 1206, 1892, 1923, 1932
TaiI	ACGT	1 cut(s)	366
TatI	WGTACW	3 cut(s)	1565, 1781, 1923
TauI	GCSGC	2 cut(s)	1029, 2335
TfiI	GAWTC	5 cut(s)	59, 74, 404, 1169, 1382
Tru1I	TTAA	6 cut(s)	1197, 1287, 1425, 1491, 1811, 2193
Tru9I	TTAA	6 cut(s)	1197, 1287, 1425, 1491, 1811, 2193
TscAI	CASTG	7 cut(s)	85, 128, 771, 1077, 1935, 2133, 2239
TseFI	GTSAC	6 cut(s)	478, 957, 1050, 1190, 1871, 2084
TseI	GCWGC	6 cut(s)	116, 761, 1940, 1954, 2045, 2342
Tsp45I	GTSAC	6 cut(s)	478, 957, 1050, 1190, 1871, 2084
TspDTI	ATGAA	9 cut(s)	230, 503, 801, 848, 1686, 1848, 1878, 1995, 2029
TspGWI	ACGGA	2 cut(s)	198, 476
TspRI	CASTG	7 cut(s)	85, 128, 771, 1077, 1935, 2133, 2239
VneI	GTGCAC	1 cut(s)	287
VpaK11BI	GGWCC	4 cut(s)	196, 648, 1676, 1772
VspI	ATTAAT	1 cut(s)	1197
XagI	CCTNNNNNAGG	1 cut(s)	1127
XapI	RAATTY	5 cut(s)	162, 706, 949, 1060, 1388
XbaI	TCTAGA	1 cut(s)	1352
XceI	RCATGY	4 cut(s)	181, 1238, 1564, 1879
XspI	CTAG	5 cut(s)	23, 725, 1353, 1436, 1616
ZraI	GACGTC	1 cut(s)	364
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.